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comparison test-data/fsd_output1.tab @ 48:e51fe3083b16 draft

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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd commit 9bae9043a53f1e07b502acd1082450adcb6d9e31-dirty
author mheinzl
date Wed, 16 Oct 2019 10:06:13 -0400
parents 6651e76baca1
children
comparison
equal deleted inserted replaced
47:1ed4a127c41a 48:e51fe3083b16
65 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) 65 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
66 Whereas the total frequencies were calculated from the whole dataset (=including the DCS). 66 Whereas the total frequencies were calculated from the whole dataset (=including the DCS).
67 67
68 FS >= 1 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads: 68 FS >= 1 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads:
69 unique: total unique total: 69 unique: total unique total:
70 SSCS ab 47 123 0.431 0.339 0.420 0.325 70 SSCS ab 47 123 0.431 0.420 0.339 0.325
71 SSCS ba 59 222 0.488 0.481 0.476 0.468 71 SSCS ba 59 222 0.541 0.527 0.612 0.587
72 DCS (total) 3 (6) 18 (33) 0.028 0.027 (0.054) 0.050 0.048 (0.087) 72 DCS (total) 3 (6) 18 (33) 0.028 0.027 (0.054) 0.050 0.048 (0.087)
73 total nr. of tags 109 363 109 112 363 378 73 total nr. of tags 109 363 109 112 363 378
74 74
75 FS >= 3 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads: 75 FS >= 3 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads:
76 unique: total unique total: 76 unique: total unique total:
144 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) 144 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
145 Whereas the total frequencies were calculated from the whole dataset (=including the DCS). 145 Whereas the total frequencies were calculated from the whole dataset (=including the DCS).
146 146
147 FS >= 1 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads: 147 FS >= 1 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads:
148 unique: total unique total: 148 unique: total unique total:
149 SSCS ab 47 123 0.431 0.339 0.420 0.325 149 SSCS ab 47 123 0.431 0.420 0.339 0.325
150 SSCS ba 59 222 0.488 0.481 0.476 0.468 150 SSCS ba 59 222 0.541 0.527 0.612 0.587
151 DCS (total) 3 (6) 18 (33) 0.028 0.027 (0.054) 0.050 0.048 (0.087) 151 DCS (total) 3 (6) 18 (33) 0.028 0.027 (0.054) 0.050 0.048 (0.087)
152 total nr. of tags 109 363 109 112 363 378 152 total nr. of tags 109 363 109 112 363 378
153 153
154 FS >= 3 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads: 154 FS >= 3 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads:
155 unique: total unique total: 155 unique: total unique total:
223 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) 223 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
224 Whereas the total frequencies were calculated from the whole dataset (=including the DCS). 224 Whereas the total frequencies were calculated from the whole dataset (=including the DCS).
225 225
226 FS >= 1 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads: 226 FS >= 1 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads:
227 unique: total unique total: 227 unique: total unique total:
228 SSCS ab 47 123 0.431 0.339 0.420 0.325 228 SSCS ab 47 123 0.431 0.420 0.339 0.325
229 SSCS ba 59 222 0.488 0.481 0.476 0.468 229 SSCS ba 59 222 0.541 0.527 0.612 0.587
230 DCS (total) 3 (6) 18 (33) 0.028 0.027 (0.054) 0.050 0.048 (0.087) 230 DCS (total) 3 (6) 18 (33) 0.028 0.027 (0.054) 0.050 0.048 (0.087)
231 total nr. of tags 109 363 109 112 363 378 231 total nr. of tags 109 363 109 112 363 378
232 232
233 FS >= 3 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads: 233 FS >= 3 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads:
234 unique: total unique total: 234 unique: total unique total:
302 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) 302 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
303 Whereas the total frequencies were calculated from the whole dataset (=including the DCS). 303 Whereas the total frequencies were calculated from the whole dataset (=including the DCS).
304 304
305 FS >= 1 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads: 305 FS >= 1 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads:
306 unique: total unique total: 306 unique: total unique total:
307 SSCS ab 47 123 0.431 0.339 0.420 0.325 307 SSCS ab 47 123 0.431 0.420 0.339 0.325
308 SSCS ba 59 222 0.488 0.481 0.476 0.468 308 SSCS ba 59 222 0.541 0.527 0.612 0.587
309 DCS (total) 3 (6) 18 (33) 0.028 0.027 (0.054) 0.050 0.048 (0.087) 309 DCS (total) 3 (6) 18 (33) 0.028 0.027 (0.054) 0.050 0.048 (0.087)
310 total nr. of tags 109 363 109 112 363 378 310 total nr. of tags 109 363 109 112 363 378
311 311
312 FS >= 3 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads: 312 FS >= 3 nr. of tags nr. of PE reads rel. freq of tags rel. freq of PE reads:
313 unique: total unique total: 313 unique: total unique total: