Mercurial > repos > mheinzl > fsd_regions

changeset 8:6c2608e8d094 draft

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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd_regions commit 8833d1a8a49d7b6d4a9c849b0335d3260564b351-dirty
author mheinzl
date Tue, 20 Nov 2018 09:51:47 -0500
parents 3b8a0e462021
children eabfdc012d7b
files fsd_regions.py
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/fsd_regions.py	Tue Nov 20 09:45:06 2018 -0500
+++ b/fsd_regions.py	Tue Nov 20 09:51:47 2018 -0500
@@ -71,7 +71,7 @@
         seqDic_ab = dict(zip(all_ab, quant_ab))
         seqDic_ba = dict(zip(all_ba, quant_ba))
 
-        if re.search(r'_(\d)+_(\d)+$', str(mut_array[0,0])) is None:
+        if re.search(r'(\d)+_(\d)+$', str(mut_array[0,0])) is None:
             seq_mut, seqMut_index = numpy.unique(numpy.array(mut_array[:, 1]), return_index=True)
             group = mut_array[seqMut_index,0]
             mut_array = mut_array[seqMut_index,:]
@@ -156,7 +156,7 @@
         for i, count in zip(groupUnique, quantAfterRegion):
             index_of_current_region = numpy.where(group == i)[0]
             plt.text(0.55, 0.14 - s, "{}=\n".format(i), size=11, transform=plt.gcf().transFigure)
-            if re.search(r'_(\d)+_(\d)+$', str(mut_array[0, 0])) is None:
+            if re.search(r'(\d)+_(\d)+$', str(mut_array[0, 0])) is None:
                 nr_tags_ab = len(numpy.unique(mut_array[index_of_current_region, 1]))
             else:
                 nr_tags_ab = len(mut_array[index_of_current_region, 1])