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diff test-data/hd_chimeras_output.tab @ 25:9e384b0741f1 draft

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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/hd commit b8a2f7b7615b2bcd3b602027af31f4e677da94f6-dirty
author mheinzl
date Tue, 14 May 2019 03:29:37 -0400
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children 6b15b3b6405c
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hd_chimeras_output.tab	Tue May 14 03:29:37 2019 -0400
@@ -0,0 +1,23 @@
+chimera tag	similar tag with HD=0
+AAAAAAAAAAAA AACCAAAACTTC	*AAAAAAAAAAAA* TCTTTCTTTGAG
+AAAAAAAAAAAA ACCAGGCGTCGA	*AAAAAAAAAAAA* AACCAAAACTTC, *AAAAAAAAAAAA* AGCTCCACGTTG, *AAAAAAAAAAAA* CAGTGTTGAGAC, *AAAAAAAAAAAA* TCTTTCTTTGAG, *AAAAAAAAAAAA* TTGGGTTCCTTA
+AAAAAAAAAAAA AGCTCCACGTTG	*AAAAAAAAAAAA* CAGTGTTGAGAC, *AAAAAAAAAAAA* CCGCTCCTCACA
+AAAAAAAAAAAA ATCGTGGTTTGT	*AAAAAAAAAAAA* CAGTGTTGAGAC, AAAAAAAAAAAG *ATCGTGGTTTGT*
+AAAAAAAAAAAA ATTCACCCTTGT	*AAAAAAAAAAAA* CAGTGTTGAGAC, AAAAAAAAAAAT *ATTCACCCTTGT*
+AAAAAAAAAAAA CACACTTAACTT	*AAAAAAAAAAAA* ATTCACCCTTGT, *AAAAAAAAAAAA* CCGCTCCTCACA, *AAAAAAAAAAAA* TCTTTCTTTGAG
+AAAAAAAAAAAA CAGTGTTGAGAC	*AAAAAAAAAAAA* ATCGTGGTTTGT, *AAAAAAAAAAAA* ATTCACCCTTGT, *AAAAAAAAAAAA* CACACTTAACTT
+AAAAAAAAAAAA CCGCTCCTCACA	*AAAAAAAAAAAA* AGCTCCACGTTG, *AAAAAAAAAAAA* CACACTTAACTT
+AAAAAAAAAAAA GGCAACACAGAA	*AAAAAAAAAAAA* ATCGTGGTTTGT, AAAAAAAAAAAG *GGCAACACAGAA*
+AAAAAAAAAAAA TCTTTCTTTGAG	*AAAAAAAAAAAA* AACCAAAACTTC, AAAAAAAAAAAG *TCTTTCTTTGAG*
+AAAAAAAAAAAA TTGGGTTCCTTA	*AAAAAAAAAAAA* ACCAGGCGTCGA, *AAAAAAAAAAAA* GGCAACACAGAA, *AAAAAAAAAAAA* TCTTTCTTTGAG
+AAAAAAAAAAAG AGTCGCACCCAG	*AAAAAAAAAAAG* ATCGTGGTTTGT
+AAAAAAAAAAAG ATCGTGGTTTGT	AAAAAAAAAAAA *ATCGTGGTTTGT*, *AAAAAAAAAAAG* TAGCCCTAAACG
+AAAAAAAAAAAG CGCAACACAGAA	*AAAAAAAAAAAG* ATCGTGGTTTGT
+AAAAAAAAAAAG GGCAACACAGAA	AAAAAAAAAAAA *GGCAACACAGAA*, *AAAAAAAAAAAG* ATCGTGGTTTGT
+AAAAAAAAAAAG TAGCCCTAAACG	*AAAAAAAAAAAG* ATCGTGGTTTGT
+AAAAAAAAAAAG TCTTTCTTTGAG	AAAAAAAAAAAA *TCTTTCTTTGAG*, *AAAAAAAAAAAG* ATCGTGGTTTGT, *AAAAAAAAAAAG* CGCAACACAGAA, *AAAAAAAAAAAG* GGCAACACAGAA
+AAAAAAAAAAAT ATCATAGACTCT	*AAAAAAAAAAAT* ATTCACCCTTGT
+AAAAAAAAAAAT ATTCACCCTTGT	AAAAAAAAAAAA *ATTCACCCTTGT*, *AAAAAAAAAAAT* ATCATAGACTCT
+AAAAAAAAAAAT ATTCGAAAGTTA	*AAAAAAAAAAAT* ATCATAGACTCT, *AAAAAAAAAAAT* ATTCACCCTTGT
+This file contains all tags that were identified as chimeras as the first column and the corresponding tags which returned a Hamming distance of zero in either the first or the second half of the sample tag as the second column.
+ The tags were separated by an empty space into their halves and the * marks the identical half.
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