Mercurial > repos > mikel-egana-aranguren > sadi_generic

annotate galaxy-dist/tools/SADI/RDFSyntaxConverter.xml @ 2:977c838e3442 draft default tip

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New dir structure, README improved, tests added and RDF merge tool created
author mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
date Fri, 25 Apr 2014 14:41:12 +0200
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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1 <tool id="RDFSyntaxConverter" name="RDF Syntax Converter" version="0.0.1">
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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2 <description>Converts RDF to N3, N-TRIPLE or TAB format</description>
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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4 <command>${__tool_data_path__}/shared/errwrap.sh java -Xmx2000M -Xms250M -jar ${__tool_data_path__}/shared/jars/RDFSyntaxConverter.jar $input $format > $output </command>
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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6 <inputs>
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7 <param name="input" type="data" format="rdf" label="RDF input file"/>
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8 <param name="format" type="select" label="Choose RDF output format">
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9 <option value="N3">N3</option>
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10 <option value="N-TRIPLE">N-TRIPLE</option>
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11 <option value="TAB" selected="true">Tab separated columns</option>
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12 </param>
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13 </inputs>
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14 <outputs>
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15 <data format="text" name="output" />
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16 </outputs>
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18 <tests>
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19 <test>
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20 <param name="input" value="hello-input.rdf"/>
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21 <param name="format" value="N3"/>
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22 <output name="output" file="RDFSyntaxConverter_N3_test_hello_output"/>
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23 </test>
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24 <test>
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25 <param name="input" value="hello-input.rdf"/>
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26 <param name="format" value="N-TRIPLE"/>
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27 <output name="output" file="RDFSyntaxConverter_N-TRIPLE_test_hello_output"/>
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28 </test>
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29 <test>
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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30 <param name="input" value="hello-input.rdf"/>
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31 <param name="format" value="TAB"/>
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32 <output name="output" file="RDFSyntaxConverter_TAB_test_hello_output"/>
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33 </test>
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34 </tests>
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35 <help>
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37 **What it does**
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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39 Given an RDF input file, it converts it to N3, N-TRIPLE or TAB (A tab delimited file containing three columns -subjects, predicates and objects- for other Galaxy tools to consume).
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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41 **About**
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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mikel-egana-aranguren <mikel.egana.aranguren@gmail.com>
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43 More information and contact: http://github.com/mikel-egana-aranguren/SADI-Galaxy
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45 </help>
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46 </tool>