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Update to Miller Lab devshed revision 4ede22dd5500
author Richard Burhans <burhans@bx.psu.edu>
date Wed, 17 Jul 2013 12:46:46 -0400
parents 8997f2ca8c7a
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8997f2ca8c7a Update to Miller Lab devshed revision bae0d3306d3b
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2 :2fb0cd69fe08
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3 cathy 2013-07-08 15:21
8997f2ca8c7a Update to Miller Lab devshed revision bae0d3306d3b
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4 New versions of Rank Pathways and Rank Terms (code from Oscar, 16 May 2013).
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5 Rank Pathways still needs updates in the help text and sample input/output,
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6 and both tools need test datasets.
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248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
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9 cathy 2013-05-10 15:45
248b06e86022 Added gd_genotype datatype. Modified tools to support new datatype.
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10 Bumped version number of the Pathway Image tool.
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13 cathy 2013-05-10 15:07
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14 Fix from Oscar to handle changes in the KEGG Mapper web form.
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16 :ea75d4a4ded0
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17 cathy 2013-03-04 16:04
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18 - documented the new Restore Attributes tool, and tweaked its description and UI
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19 - adjusted doc for the new Rank Terms tool, and tweaked its description and UI
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20 - added doc paragraph for new ability of Filter SNPs to handle % thresholds
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21 - tweaked description and doc for Rank Pathways and PCA
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22 - bumped version numbers for Filter SNPs and Remarkable Intervals, due to
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23 new functionality and bug fix, respectively
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25 :b63c3675e0a3
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26 cathy 2013-02-04 18:31
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27 Edited the README to instruct users to copy the files in static/images
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28 into their Galaxy installation.
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d6b961721037 Miller Lab Devshed version 4c04e35b18f6
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30 :f556345a4185
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31 cathy 2012-11-02 17:45
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32 Tweaked parameter labels.
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f04f40a36cc8 Latest changes from Belinda and Cathy. Webb's updates to the Fst tools.
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34 :8703e16fca01
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35 cathy 2012-10-04 11:42
f04f40a36cc8 Latest changes from Belinda and Cathy. Webb's updates to the Fst tools.
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36 More changes by Cathy, mostly in Phylogenetic Tree and Prepare Input,
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37 including some UI adjustments.
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40 cathy 2012-09-28 00:55
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41 Galaxy didn't like my RST syntax. :-/
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44 cathy 2012-09-28 00:08
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45 Tweaks by Cathy, e.g. adjusting text where renamed tools are mentioned.
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46 Also riemerized through first section, "Initial Analysis".
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49 cathy 2012-09-27 14:03
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50 Fixed datatype bugs in the Filter SNPs and Aggregate Individuals tools.
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53 cathy 2012-09-26 15:38
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54 Restored modify_snp_table.py from the archive, since it's still used by the
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55 Filter SNPs and Aggregate Individuals tools.
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57 :cc508d55cc9d
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58 cathy 2012-09-26 15:16
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59 Tweaked description for the Prepare Input tool.
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62 cathy 2012-09-26 15:10
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63 Added ": " at the beginning of each description to separate it from the name.
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66 cathy 2012-09-26 13:01
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67 Clarified tool names and descriptions.
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70 cathy 2012-09-19 17:15
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71 Edited docs in aggregate_gd_indivs.xml: clarified "What it does", reformatted
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72 example data.
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75 cathy 2012-09-19 11:31
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76 Edited docs in specify.xml: clarified "What it does", reformatted example data.
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