Mercurial > repos > miller-lab > genome_diversity
diff test-data/test_out/phylogenetic_tree/phylogenetic_tree.html @ 12:4b6590dd7250
Uploaded
| author | miller-lab |
|---|---|
| date | Wed, 12 Sep 2012 17:10:26 -0400 |
| parents | 2c498d40ecde |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_out/phylogenetic_tree/phylogenetic_tree.html Wed Sep 12 17:10:26 2012 -0400 @@ -0,0 +1,49 @@ +<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" +"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> +<html xmlns="http://www.w3.org/1999/xhtml"> + <head> + <meta http-equiv="Content-type" content="text/html; charset=UTF-8" /> + <link rel="stylesheet" href="/static/style/base.css" type="text/css" /> + <title>Phylogenetic tree Galaxy Composite Dataset</title> + </head> + <body> + <div class="document"> + Output completed: 2012-04-03 01:57:44 PM + <p/> + <div id="gd_outputs"> + Outputs + <ul> + <li><a href="tree.pdf">tree.pdf</a></li> + <li><a href="phylogenetic_tree.newick">phylogenetic tree (newick)</a></li> + <li><a href="distance_matrix.phylip">Phylip distance matrix</a></li> + <li><a href="mega_distance_matrix.txt">Mega distance matrix</a></li> + <li><a href="informative_snps.txt">informative SNPs</a></li> + </ul> + </div> + <div id="gd_inputs"> + Inputs + <ul> + <li>Minimum coverage: 3</li> + <li>Minimum quality: 30</li> + <li>Include reference sequence: yes</li> + <li>Data source: sequence coverage</li> + <li>Branch type: square</li> + <li>Draw branches to scale: yes</li> + <li>Show branch lengths: yes</li> + <li>Tree layout: horizontal</li> + </ul> + </div> + <div id="gd_misc"> + Individuals +<ol> +<li>PB1</li> +<li>PB2</li> +<li>PB3</li> +<li>PB4</li> +<li>PB6</li> +<li>PB8</li> +</ol> + </div> + </div> + </body> +</html>