Mercurial > repos > miller-lab > genome_diversity
diff add_fst_column.xml @ 10:9b92372de9f6
rename snp to gsSnp, sap to gdSap
author | Richard Burhans <burhans@bx.psu.edu> |
---|---|
date | Tue, 04 Sep 2012 12:49:53 -0400 |
parents | e29f4d801bb0 |
children |
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--- a/add_fst_column.xml Tue Jul 10 11:41:22 2012 -0400 +++ b/add_fst_column.xml Tue Sep 04 12:49:53 2012 -0400 @@ -10,7 +10,7 @@ </command> <inputs> - <param name="input" type="data" format="snp" label="SNP table" /> + <param name="input" type="data" format="gdSnp" label="SNP table" /> <param name="p1_input" type="data" format="ind" label="Population 1 individuals" /> <param name="p2_input" type="data" format="ind" label="Population 2 individuals" /> @@ -40,12 +40,12 @@ </inputs> <outputs> - <data name="output" format="snp" metadata_source="input" /> + <data name="output" format="gdSnp" metadata_source="input" /> </outputs> <tests> <test> - <param name="input" value="test_in/sample.snp" ftype="snp" /> + <param name="input" value="test_in/sample.gdSnp" ftype="gdSnp" /> <param name="p1_input" value="test_in/a.ind" ftype="ind" /> <param name="p2_input" value="test_in/b.ind" ftype="ind" /> <param name="data_source" value="0" /> @@ -54,7 +54,7 @@ <param name="retain" value="0" /> <param name="discard_fixed" value="1" /> <param name="biased" value="0" /> - <output name="output" file="test_out/add_fst_column/add_fst_column.snp" /> + <output name="output" file="test_out/add_fst_column/add_fst_column.gdSnp" /> </test> </tests>