Mercurial > repos > mingchen0919 > aurora_star_site
comparison expose-outputs-to-galaxy-history.sh @ 0:c12e291895ff draft
planemo upload commit 104ae24ee30761a0099eeb91362ed1e3e13aba4b
| author | mingchen0919 |
|---|---|
| date | Tue, 01 May 2018 10:45:22 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:c12e291895ff |
|---|---|
| 1 # change directory to tool outputs directory | |
| 2 cd ${REPORT_FILES_PATH} | |
| 3 | |
| 4 # copy outputs from tool outputs directory to corresponding galaxy output path | |
| 5 if [ -e "rmarkdown_report.html" ]; then | |
| 6 cp rmarkdown_report.html ${REPORT} | |
| 7 fi | |
| 8 | |
| 9 if [ -e "index.html" ]; then | |
| 10 cp index.html ${REPORT} | |
| 11 fi | |
| 12 | |
| 13 cp Aligned.out.sorted.bam ${X_S} |