Mercurial > repos > mingchen0919 > rmarkdown_deseq2

diff DESeq_visualization.Rmd @ 2:a0d37b034e45 draft

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_deseq2 commit 9285c2b8ad41a486dde2a87600a6b8267841c8b5-dirty
author mingchen0919
date Tue, 08 Aug 2017 10:56:49 -0400
parents 7231d7e8d3ed
children
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--- a/DESeq_visualization.Rmd	Tue Aug 08 10:47:41 2017 -0400
+++ b/DESeq_visualization.Rmd	Tue Aug 08 10:56:49 2017 -0400
@@ -106,7 +106,7 @@
 
 ### Using the *Poisson Distance*
 
-```{r}
+```{r eval=FALSE}
 mdsPois <- as.data.frame(colData(dds)) %>%
    cbind(cmdscale(samplePoisDistMatrix))
 ggplot(mdsPois, aes(x = `1`, y = `2`, col = time)) +