Mercurial > repos > mvdbeek > sra_tools
comparison README.md @ 0:9f74a22d2060 draft default tip
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/sra-tools commit 70fadb7e8972b1db550d0e067584930ce1ec8673-dirty
author | mvdbeek |
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date | Wed, 04 Nov 2015 06:57:32 -0500 |
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1 [![Build Status](https://travis-ci.org/mdshw5/sra-tools-galaxy.svg?branch=master)](https://travis-ci.org/mdshw5/sra-tools-galaxy) | |
2 | |
3 The Galaxy tool wrappers contained in this tool shed repository rely on software developed by | |
4 the NCBI: http://github.com/ncbi/sra-tools. | |
5 | |
6 # INSTALLATION | |
7 | |
8 Please use the Galaxy admin interface to install from the toolshed: https://toolshed.g2.bx.psu.edu/view/matt-shirley/ncbi_sra_toolkit | |
9 | |
10 This software release was designed to install using the Galaxy toolshed under Linux and MacOS operating systems on Intel x86-compatible 32/64 bit architectures. | |
11 | |
12 *Build Requirements* | |
13 | |
14 - bash | |
15 - git | |
16 - make | |
17 - gcc | |
18 - g++ | |
19 - perl | |
20 - libxml2 | |
21 | |
22 On a Debian OS use: | |
23 | |
24 apt-get install build-essential libxml2-dev git | |
25 | |
26 On a Mac with [command line tools](https://developer.apple.com/downloads/index.action) installed: | |
27 | |
28 brew install git libxml2 | |
29 | |
30 CONTROLLED-ACCESS DATA | |
31 | |
32 Encrypted, controlled-access data is not supported. |