annotate save_z_15/readme.txt @ 0:ae6f616e7637 draft

Uploaded
author nanettec
date Fri, 18 Mar 2016 05:49:55 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
1 ======================================================================
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
2 save_z_15
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
3 ======================================================================
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
4 ### This is the third tool in the eQTL mapper workflow:
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
5 split_15, qtlmap_15, save_z_15, integrate_15
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
6
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
7 Link to the workflow (for import): http://chewbacca.bi.up.ac.za:8080/u/nanette/w/15-parallel
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
8
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
9 QTL Cartographer is employed for eQTL mapping.
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
10
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
11 A partial z file is saved; this is an input file for the eQTL backend pipeline.
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
12
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
13 ---------------
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
14 Installation
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
15 ---------------
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
16
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
17 The eQTL mapper pipeline is available for:
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
18 * command line usage
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
19 * integration into Galaxy servers
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
20
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
21
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
22 Requirements: Python 2.7
ae6f616e7637 Uploaded
nanettec
parents:
diff changeset
23 QTL Cartographer 1.17