annotate save_z_15/save_z7_15nodes.xml @ 0:ae6f616e7637 draft

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author nanettec
date Fri, 18 Mar 2016 05:49:55 -0400
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1 <tool id="savez7_15nodes" name="Run QTL Cartographer" version="7.0.0">
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2 <description> and save partial z file</description>
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3 <command interpreter="python">
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4 save_z7_15nodes.py --input1 $input1 --input2 $input2 --input3 $input3 --output1 $output1
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5 </command>
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6 <inputs>
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7 <param label="Phenotype-genotype (.inp) file" name="input1" type="data" format="txt" help="A .inp file with all genotype and phenotype information"></param>
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8 <param label="QTL Cartographer map file" name="input2" type="data" format="txt" help="A .inp file with all genotype and phenotype information"></param>
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9 <param label="Parameters file" name="input3" type="data" format="txt" help="Parameters file with the values of all the parameters for QTL mapping"></param>
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10 </inputs>
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11 <outputs>
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12 <data format="text" name="output1" />
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13 </outputs>
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14 <requirements>
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15 </requirements>
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16 <tests>
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17 <test>
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18 </test>
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19 </tests>
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20 <help>
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21
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22 **What it does**
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23
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24 Runs QTL Cartographer for QTL/eQTL mapping. Parse the results. Save a partial z file.
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25
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26 </help>
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27 </tool>