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comparison search-operations.xml @ 0:028a3ffc17b4 draft

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planemo upload commit b095175f34e78ceded24a6e1da99b328f50db86d
author nathandunn
date Fri, 23 Jun 2017 15:04:12 -0400
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-1:000000000000 0:028a3ffc17b4
1 <tool id="planteome-search-operations" name="Search Operations" version="0.1.0">
2 <macros>
3 <import>macros.xml</import>
4 </macros>
5 <expand macro="frontmatter" />
6 <command><![CDATA[
7 curl --silent -X GET --header 'Accept: application/json' 'http://biolink.planteome.org/apiapi/search/entity/$input?rows=$rows&fetch_objects=true' > $output
8 ]]></command>
9 <inputs>
10 <param name="input" type="text" format="txt" multiple="false" label="Search Term (e.g. shh, parkinson, femur)" />
11 <param name="rows" type="text" format="txt" multiple="false" value="1000" label="Num Rows"/>
12 </inputs>
13 <expand macro="outputs" />
14 <tests>
15 <test>
16 <param name="input" value="ssh"/>
17 <output name="output" file="ssh-search-term.json"/>
18 </test>
19 <test>
20 <param name="input" value="parkinson"/>
21 <output name="output" file="parkinson-search-term.json"/>
22 </test>
23 <test>
24 <param name="input" value="femur"/>
25 <output name="output" file="femur-search-term.json"/>
26 </test>
27 </tests>
28 <expand macro="citations" />
29 </tool>
30