Mercurial > repos > nathandunn > biolinkplanteome
diff search-operations.xml @ 0:028a3ffc17b4 draft
planemo upload commit b095175f34e78ceded24a6e1da99b328f50db86d
| author | nathandunn |
|---|---|
| date | Fri, 23 Jun 2017 15:04:12 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/search-operations.xml Fri Jun 23 15:04:12 2017 -0400 @@ -0,0 +1,30 @@ +<tool id="planteome-search-operations" name="Search Operations" version="0.1.0"> + <macros> + <import>macros.xml</import> + </macros> + <expand macro="frontmatter" /> + <command><![CDATA[ +curl --silent -X GET --header 'Accept: application/json' 'http://biolink.planteome.org/apiapi/search/entity/$input?rows=$rows&fetch_objects=true' > $output + ]]></command> + <inputs> + <param name="input" type="text" format="txt" multiple="false" label="Search Term (e.g. shh, parkinson, femur)" /> + <param name="rows" type="text" format="txt" multiple="false" value="1000" label="Num Rows"/> + </inputs> + <expand macro="outputs" /> + <tests> + <test> + <param name="input" value="ssh"/> + <output name="output" file="ssh-search-term.json"/> + </test> + <test> + <param name="input" value="parkinson"/> + <output name="output" file="parkinson-search-term.json"/> + </test> + <test> + <param name="input" value="femur"/> + <output name="output" file="femur-search-term.json"/> + </test> + </tests> + <expand macro="citations" /> +</tool> +