Mercurial > repos > nathandunn > biolinkplanteome
diff disease-associations.xml @ 1:66ece4fd024f draft default tip
planemo upload commit 20eeb677e99874173440a365f2db04e315e7ebed
author | nathandunn |
---|---|
date | Wed, 28 Jun 2017 10:27:08 -0400 |
parents | 028a3ffc17b4 |
children |
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--- a/disease-associations.xml Fri Jun 23 15:04:12 2017 -0400 +++ b/disease-associations.xml Wed Jun 28 10:27:08 2017 -0400 @@ -4,10 +4,10 @@ </macros> <expand macro="frontmatter" /> <command><![CDATA[ -curl --silent -X GET --header 'Accept: application/json' 'http://biolink.planteome.org/apiapi/bioentity/disease/$input/$association/?rows=$rows&fetch_objects=true' > $output +curl --silent -X GET --header 'Accept: application/json' 'http://biolink.planteome.org/api/bioentity/disease/$input/$association/?rows=$rows&fetch_objects=true' > $output ]]></command> <inputs> - <param name="input" type="text" format="txt" multiple="false" label="Disease (e.g. OMIM:605543, DOID:678)" /> + <param name="input" type="text" format="txt" multiple="false" label="Disease (e.g. GO:0033365)" /> <param name="association" type="select" multiple="false" display="radio" label="Type"> <option value="genes">Genes</option> <option value="models">Models</option> @@ -18,17 +18,17 @@ <expand macro="outputs" /> <tests> <test> - <param name="input" value="OMIM:605543"/> + <param name="input" value="GO:0033365"/> <param name="association" value="genes"/> <output name="output" file="genes-for-disease.json"/> </test> <test> - <param name="input" value="OMIM:605543"/> + <param name="input" value="GO:0033365"/> <param name="association" value="models"/> <output name="output" file="models-for-disease.json"/> </test> <test> - <param name="input" value="OMIM:605543"/> + <param name="input" value="GO:0033365"/> <param name="association" value="phenotypes"/> <output name="output" file="phenotypes-for-disease.json"/> </test>