Mercurial > repos > nick > allele_counts

comparison tests/real.csv.out @ 8:411adeff1eec draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Handle "." sample columns, update tests to work with BIAS column.
author nick
date Tue, 23 Aug 2016 02:30:56 -0400
parents 31361191d2d2
children 6cc488e11544
comparison
equal deleted inserted replaced
7:a72277535a2c 8:411adeff1eec
1 THYROID chr1 246704250 29 0 0 0 29 1 A . 0.0 1 THYROID chr1 246704250 29 0 0 0 29 1 A . 0.0 .
2 THYROID chr1 246704257 0 0 0 71 71 1 T . 0.0 2 THYROID chr1 246704257 0 0 0 71 71 1 T . 0.0 .
3 THYROID chr1 246704268 104 0 0 0 104 1 A . 0.0 3 THYROID chr1 246704268 104 0 0 0 104 1 A . 0.0 .
4 THYROID chr1 246704269 0 0 0 105 105 1 T . 0.0 4 THYROID chr1 246704269 0 0 0 105 105 1 T . 0.0 .
5 THYROID chr1 246704363 0 72 3 0 75 0 C G 0.04 5 THYROID chr1 246704363 0 72 3 0 75 0 C G 0.04 1.36364
6 THYROID chr1 246704437 5 130 0 0 135 0 C A 0.03704 6 THYROID chr1 246704437 5 130 0 0 135 0 C A 0.03704 2.14286
7 THYROID chr1 246707878 0 0 131 0 131 1 G . 0.0 7 THYROID chr1 246707878 0 0 131 0 131 1 G . 0.0 .
8 THYROID chr1 246714587 30 0 43 0 73 2 G A 0.41096 8 THYROID chr1 246714587 30 0 43 0 73 2 G A 0.41096 1.22996
9 THYROID chr1 246729216 1 0 1 90 92 0 T G 0.01087 9 THYROID chr1 246729216 1 0 1 90 92 0 T G 0.01087 9.1
10 THYROID chr7 91502881 0 0 0 26 26 1 T . 0.0 10 THYROID chr7 91502881 0 0 0 26 26 1 T . 0.0 .
11 THYROID chr7 91502897 7 36 0 0 43 0 C A 0.16279 11 THYROID chr7 91502897 7 36 0 0 43 0 C A 0.16279 1.79167