Mercurial > repos > nick > allele_counts

annotate tests/real.csv.out @ 8:411adeff1eec draft

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Handle "." sample columns, update tests to work with BIAS column.
author nick
date Tue, 23 Aug 2016 02:30:56 -0400
parents 31361191d2d2
children 6cc488e11544
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
8
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
1 THYROID chr1 246704250 29 0 0 0 29 1 A . 0.0 .
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
2 THYROID chr1 246704257 0 0 0 71 71 1 T . 0.0 .
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
3 THYROID chr1 246704268 104 0 0 0 104 1 A . 0.0 .
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
4 THYROID chr1 246704269 0 0 0 105 105 1 T . 0.0 .
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
5 THYROID chr1 246704363 0 72 3 0 75 0 C G 0.04 1.36364
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
6 THYROID chr1 246704437 5 130 0 0 135 0 C A 0.03704 2.14286
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
7 THYROID chr1 246707878 0 0 131 0 131 1 G . 0.0 .
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
8 THYROID chr1 246714587 30 0 43 0 73 2 G A 0.41096 1.22996
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
9 THYROID chr1 246729216 1 0 1 90 92 0 T G 0.01087 9.1
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
10 THYROID chr7 91502881 0 0 0 26 26 1 T . 0.0 .
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
11 THYROID chr7 91502897 7 36 0 0 43 0 C A 0.16279 1.79167