Mercurial > repos > nick > dunovo

comparison tool_dependencies.xml @ 6:23f5d9316694 draft

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Bugfix in kalign for very diverse read lengths.
author nick
date Thu, 02 Nov 2017 16:24:48 -0400
parents 5fbeaa41b223
children e7b88ffb8294
comparison
equal deleted inserted replaced
5:000969829a5d 6:23f5d9316694
7 <repository changeset_revision="1409782220c9" name="package_samtools_0_1_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="1409782220c9" name="package_samtools_0_1_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="mafft" version="7.221"> 9 <package name="mafft" version="7.221">
10 <repository changeset_revision="15974dd17515" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="15974dd17515" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <package name="networkx" version="1.11"> 12 <package name="networkx" version="1.10">
13 <repository changeset_revision="e761775277c1" name="package_networkx_1_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> 13 <repository changeset_revision="e761775277c1" name="package_networkx_1_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
14 </package> 14 </package>
15 <package name="dunovo" version="2.0.6"> 15 <package name="dunovo" version="2.0.8">
16 <install version="1.0"> 16 <install version="1.0">
17 <actions> 17 <actions>
18 <action sha256sum="3d628d297767f9836ab57ef738b2b29f588c36df8c43ec6814ea97e29da1d5ec" type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v2.0.6.tar.gz</action> 18 <action sha256sum="4c105e29eff271b9e32f12c5d2862b717ba960981f4820dae26e159e2a0ed33d" type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v2.0.8.tar.gz</action>
19 <action type="shell_command">make</action> 19 <action type="shell_command">make</action>
20 <action type="move_directory_files"> 20 <action type="move_directory_files">
21 <source_directory>.</source_directory> 21 <source_directory>.</source_directory>
22 <destination_directory>$INSTALL_DIR</destination_directory> 22 <destination_directory>$INSTALL_DIR</destination_directory>
23 </action> 23 </action>