Mercurial > repos > nick > dunovo
view out2.log @ 11:0f8e0dc73d1d draft default tip
"planemo upload for repository https://github.com/galaxyproject/dunovo commit dbd33f95b486dc556c435f1b42736b818a2b9802-dirty"
| author | nick |
|---|---|
| date | Wed, 16 Feb 2022 22:59:00 +0000 |
| parents | |
| children |
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git --git-dir /home/me/.planemo/gx_repo config remote.origin.fetch '+refs/*:refs/*' git --git-dir /home/me/.planemo/gx_repo config remote.origin.mirror true git --git-dir /home/me/.planemo/gx_repo remote update >/dev/null 2>&1 git clone --branch master /home/me/.planemo/gx_repo /tmp/tmp1upz926i/galaxy-dev if [ -d .venv ]; then GALAXY_VIRTUAL_ENV=.venv; else GALAXY_VIRTUAL_ENV=/home/me/.planemo/gx_venv_3; fi && export GALAXY_VIRTUAL_ENV && if [ ! -e "$GALAXY_VIRTUAL_ENV" ]; then /usr/bin/python3 -m venv $GALAXY_VIRTUAL_ENV; echo "Created virtualenv"; fi && if [ -e "$GALAXY_VIRTUAL_ENV" ]; then . "$GALAXY_VIRTUAL_ENV"/bin/activate; echo "Activated a virtualenv for Galaxy"; echo "$VIRTUAL_ENV"; else echo "Failed to activate virtualenv."; fi && COMMON_STARTUP_ARGS=; $(grep -q 'skip-venv' run_tests.sh) && COMMON_STARTUP_ARGS="--dev-wheels"; export COMMON_STARTUP_ARGS; echo "Set COMMON_STARTUP_ARGS to ${COMMON_STARTUP_ARGS}" && ./scripts/common_startup.sh ${COMMON_STARTUP_ARGS} Activated a virtualenv for Galaxy /home/me/.planemo/gx_venv_3 Set COMMON_STARTUP_ARGS to --dev-wheels Initializing tool-data/shared/ucsc/builds.txt from builds.txt.sample Initializing tool-data/shared/ucsc/manual_builds.txt from manual_builds.txt.sample Initializing static/welcome.html from welcome.html.sample Activating virtualenv at /home/me/.planemo/gx_venv_3 Requirement already satisfied: pip>=19.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (20.0.2) Ignoring async-exit-stack: markers 'python_version >= "3.6" and python_version < "3.7"' don't match your environment Ignoring async-generator: markers 'python_version < "3.7" and python_version >= "3.6"' don't match your environment Ignoring atomicwrites: markers 'python_version >= "3.6" and python_full_version < "3.0.0" and sys_platform == "win32" or sys_platform == "win32" and python_version >= "3.6" and python_full_version >= "3.4.0"' don't match your environment Ignoring cached-property: markers 'python_version < "3.8" and python_version >= "3.6"' don't match your environment Ignoring cffi: markers 'implementation_name == "pypy" and python_version >= "3.6" and (python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.4.0")' don't match your environment Ignoring colorama: markers 'python_version >= "3.6" and python_full_version < "3.0.0" and sys_platform == "win32" or sys_platform == "win32" and python_version >= "3.6" and python_full_version >= "3.5.0"' don't match your environment Ignoring contextvars: markers 'python_version < "3.7" and python_version >= "3.6"' don't match your environment Ignoring dataclasses: markers 'python_version >= "3.6" and python_version < "3.7"' don't match your environment Ignoring immutables: markers 'python_version >= "3.6" and python_version < "3.7"' don't match your environment Ignoring importlib-metadata: markers 'python_version < "3.8" and python_version >= "3.6" and (python_version == "3.6" or python_version == "3.7") and (python_version >= "3.6" and python_full_version < "3.0.0" and python_version < "3.8" or python_full_version >= "3.4.0" and python_version >= "3.6" and python_version < "3.8")' don't match your environment Ignoring importlib-resources: markers 'python_version < "3.7" and python_version >= "3.6"' don't match your environment Ignoring py: markers 'python_version >= "3.6" and python_full_version < "3.0.0" and implementation_name == "pypy" or python_full_version >= "3.4.0" and python_version >= "3.6" and implementation_name == "pypy"' don't match your environment Ignoring pycparser: markers 'python_version >= "3.6" and python_full_version < "3.0.0" and implementation_name == "pypy" or implementation_name == "pypy" and python_version >= "3.6" and python_full_version >= "3.4.0"' don't match your environment Ignoring pyreadline3: markers 'sys_platform == "win32" and python_version >= "3.8"' don't match your environment Ignoring pyreadline: markers 'python_version >= "3.6" and python_full_version < "3.0.0" and python_version < "3.8" and sys_platform == "win32" or python_version >= "3.6" and python_version < "3.8" and python_full_version >= "3.5.0" and sys_platform == "win32"' don't match your environment Ignoring ruamel.yaml.clib: markers 'platform_python_implementation == "CPython" and python_version < "3.8" and python_version >= "3.6"' don't match your environment Ignoring typing-extensions: markers 'python_version >= "3.6" and python_version < "3.8"' don't match your environment Ignoring zipp: markers 'python_version < "3.7" and python_version >= "3.6"' don't match your environment Looking in indexes: https://wheels.galaxyproject.org/simple, https://pypi.python.org/simple, https://wheels.galaxyproject.org/simple Requirement already satisfied: adal==1.2.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 3)) (1.2.7) Requirement already satisfied: aiofiles==0.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 4)) (0.6.0) Requirement already satisfied: alabaster==0.7.12 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 5)) (0.7.12) Requirement already satisfied: amqp==5.0.6 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 6)) (5.0.6) Requirement already satisfied: appdirs==1.4.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 7)) (1.4.4) Requirement already satisfied: argcomplete==1.12.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 8)) (1.12.3) Requirement already satisfied: attmap==0.13.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 12)) (0.13.0) Requirement already satisfied: attrs==20.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 13)) (20.3.0) Requirement already satisfied: babel==2.9.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 14)) (2.9.0) Requirement already satisfied: bagit-profile==1.3.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 15)) (1.3.1) Requirement already satisfied: bagit==1.8.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 16)) (1.8.1) Requirement already satisfied: bcrypt==3.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 17)) (3.2.0) Requirement already satisfied: bdbag==1.6.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 18)) (1.6.1) Requirement already satisfied: beaker==1.11.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 19)) (1.11.0) Requirement already satisfied: billiard==3.6.4.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 20)) (3.6.4.0) Requirement already satisfied: bioblend==0.15.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 21)) (0.15.0) Requirement already satisfied: bleach==3.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 22)) (3.3.0) Requirement already satisfied: boltons==20.2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 23)) (20.2.1) Requirement already satisfied: boto3==1.16.63 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 24)) (1.16.63) Requirement already satisfied: boto==2.49.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 25)) (2.49.0) Requirement already satisfied: botocore==1.19.63 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 26)) (1.19.63) Requirement already satisfied: bx-python==0.8.11 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 27)) (0.8.11) Requirement already satisfied: cachecontrol==0.11.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 28)) (0.11.7) Requirement already satisfied: cachetools==4.2.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 30)) (4.2.2) Requirement already satisfied: celery==5.0.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 31)) (5.0.5) Requirement already satisfied: certifi==2020.12.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 32)) (2020.12.5) Requirement already satisfied: chardet==4.0.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 34)) (4.0.0) Requirement already satisfied: cheetah3==3.2.6.post1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 35)) (3.2.6.post1) Requirement already satisfied: circus==0.17.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 36)) (0.17.1) Requirement already satisfied: click-didyoumean==0.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 37)) (0.0.3) Requirement already satisfied: click-plugins==1.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 38)) (1.1.1) Requirement already satisfied: click-repl==0.1.6 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 39)) (0.1.6) Requirement already satisfied: click==7.1.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 40)) (7.1.2) Requirement already satisfied: cliff==3.7.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 41)) (3.7.0) Requirement already satisfied: cloudauthz==0.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 42)) (0.6.0) Requirement already satisfied: cloudbridge==2.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 43)) (2.1.0) Requirement already satisfied: cmd2==1.5.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 44)) (1.5.0) Requirement already satisfied: coloredlogs==15.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 46)) (15.0) Requirement already satisfied: commonmark==0.9.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 47)) (0.9.1) Requirement already satisfied: coverage==5.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 49)) (5.5) Requirement already satisfied: cryptography==3.4.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 50)) (3.4.7) Requirement already satisfied: cwltool==3.0.20201109103151 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 51)) (3.0.20201109103151) Requirement already satisfied: debtcollector==2.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 53)) (2.2.0) Requirement already satisfied: decorator==5.0.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 54)) (5.0.7) Requirement already satisfied: defusedxml==0.7.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 55)) (0.7.1) Requirement already satisfied: deprecated==1.2.12 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 56)) (1.2.12) Requirement already satisfied: deprecation==2.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 57)) (2.1.0) Requirement already satisfied: dictobj==0.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 58)) (0.4) Requirement already satisfied: docopt==0.6.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 59)) (0.6.2) Requirement already satisfied: docutils==0.16 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 60)) (0.16) Requirement already satisfied: dogpile.cache==1.1.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 61)) (1.1.2) Requirement already satisfied: ecdsa==0.14.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 62)) (0.14.1) Requirement already satisfied: edam-ontology==1.25.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 63)) (1.25.2) Requirement already satisfied: fabric3==1.14.post1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 64)) (1.14.post1) Requirement already satisfied: fastapi-utils==0.2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 65)) (0.2.1) Requirement already satisfied: fastapi==0.65.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 66)) (0.65.2) Requirement already satisfied: fluent-logger==0.10.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 67)) (0.10.0) Requirement already satisfied: fs==2.4.13 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 68)) (2.4.13) Requirement already satisfied: funcsigs==1.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 69)) (1.0.2) Requirement already satisfied: future==0.18.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 70)) (0.18.2) Requirement already satisfied: galaxy-sequence-utils==1.1.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 71)) (1.1.5) Requirement already satisfied: google-api-core==1.26.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 72)) (1.26.3) Requirement already satisfied: google-api-python-client==1.12.8 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 73)) (1.12.8) Requirement already satisfied: google-auth-httplib2==0.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 74)) (0.1.0) Requirement already satisfied: google-auth==1.30.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 75)) (1.30.0) Requirement already satisfied: googleapis-common-protos==1.53.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 76)) (1.53.0) Requirement already satisfied: greenlet==1.0.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 77)) (1.0.0) Requirement already satisfied: gunicorn==20.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 78)) (20.1.0) Requirement already satisfied: gxformat2==0.15.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 79)) (0.15.0) Requirement already satisfied: h11==0.12.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 80)) (0.12.0) Requirement already satisfied: h5py==3.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 81)) (3.1.0) Requirement already satisfied: httpcore==0.13.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 82)) (0.13.0) Requirement already satisfied: httplib2==0.19.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 83)) (0.19.1) Requirement already satisfied: httpx==0.18.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 84)) (0.18.0) Requirement already satisfied: humanfriendly==9.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 85)) (9.1) Requirement already satisfied: idna==2.10 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 86)) (2.10) Requirement already satisfied: imagesize==1.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 87)) (1.2.0) Requirement already satisfied: iniconfig==1.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 91)) (1.1.1) Requirement already satisfied: isa-rwval==0.10.10 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 92)) (0.10.10) Requirement already satisfied: iso8601==0.1.14 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 93)) (0.1.14) Requirement already satisfied: isodate==0.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 94)) (0.6.0) Requirement already satisfied: jinja2==2.11.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 95)) (2.11.3) Requirement already satisfied: jmespath==0.10.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 96)) (0.10.0) Requirement already satisfied: jsonpatch==1.32 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 97)) (1.32) Requirement already satisfied: jsonpointer==2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 98)) (2.1) Requirement already satisfied: jsonschema==3.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 99)) (3.2.0) Requirement already satisfied: keystoneauth1==4.3.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 100)) (4.3.1) Requirement already satisfied: kombu==5.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 101)) (5.0.2) Requirement already satisfied: lagom==1.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 102)) (1.2.0) Requirement already satisfied: lockfile==0.12.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 103)) (0.12.2) Requirement already satisfied: lxml==4.6.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 104)) (4.6.3) Requirement already satisfied: mako==1.1.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 105)) (1.1.4) Requirement already satisfied: markdown-it-reporter==0.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 106)) (0.0.2) Requirement already satisfied: markdown==3.3.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 107)) (3.3.4) Requirement already satisfied: markupsafe==1.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 108)) (1.1.1) Requirement already satisfied: mercurial==5.7.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 109)) (5.7.1) Requirement already satisfied: mirakuru==2.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 110)) (2.3.0) Requirement already satisfied: mistune==0.8.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 111)) (0.8.4) Requirement already satisfied: mrcfile==1.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 112)) (1.3.0) Requirement already satisfied: msgpack==1.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 113)) (1.0.2) Requirement already satisfied: munch==2.5.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 114)) (2.5.0) Requirement already satisfied: mypy-extensions==0.4.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 115)) (0.4.3) Requirement already satisfied: netaddr==0.8.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 116)) (0.8.0) Requirement already satisfied: netifaces==0.10.9 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 117)) (0.10.9) Requirement already satisfied: networkx==2.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 118)) (2.5) Requirement already satisfied: nodeenv==1.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 119)) (1.6.0) Requirement already satisfied: nose==1.3.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 120)) (1.3.7) Requirement already satisfied: nosehtml==0.4.6 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 121)) (0.4.6) Requirement already satisfied: numpy==1.19.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 122)) (1.19.5) Requirement already satisfied: oauth2client==4.1.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 123)) (4.1.3) Requirement already satisfied: oauthlib==3.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 124)) (3.1.0) Requirement already satisfied: openstacksdk==0.52.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 125)) (0.52.0) Requirement already satisfied: os-client-config==2.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 126)) (2.1.0) Requirement already satisfied: os-service-types==1.7.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 127)) (1.7.0) Requirement already satisfied: osc-lib==2.3.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 128)) (2.3.1) Requirement already satisfied: oslo.config==8.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 129)) (8.6.0) Requirement already satisfied: oslo.context==3.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 130)) (3.2.0) Requirement already satisfied: oslo.i18n==5.0.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 131)) (5.0.1) Requirement already satisfied: oslo.log==4.4.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 132)) (4.4.0) Requirement already satisfied: oslo.serialization==4.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 133)) (4.1.0) Requirement already satisfied: oslo.utils==4.8.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 134)) (4.8.0) Requirement already satisfied: oyaml==1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 135)) (1.0) Requirement already satisfied: packaging==20.9 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 136)) (20.9) Requirement already satisfied: paramiko==2.7.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 137)) (2.7.2) Requirement already satisfied: parsley==1.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 138)) (1.3) Requirement already satisfied: paste==3.5.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 139)) (3.5.0) Requirement already satisfied: pastedeploy==2.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 140)) (2.1.1) Requirement already satisfied: pbr==5.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 141)) (5.6.0) Requirement already satisfied: pluggy==0.13.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 142)) (0.13.1) Requirement already satisfied: port-for==0.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 143)) (0.4) Requirement already satisfied: prettytable==0.7.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 144)) (0.7.2) Requirement already satisfied: prompt-toolkit==3.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 145)) (3.0.3) Requirement already satisfied: protobuf==3.15.8 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 146)) (3.15.8) Requirement already satisfied: prov==1.5.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 147)) (1.5.1) Requirement already satisfied: psutil==5.8.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 148)) (5.8.0) Requirement already satisfied: pulsar-galaxy-lib==0.14.10 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 149)) (0.14.10) Requirement already satisfied: pyasn1-modules==0.2.8 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 151)) (0.2.8) Requirement already satisfied: pyasn1==0.4.8 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 152)) (0.4.8) Requirement already satisfied: pycryptodome==3.10.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 154)) (3.10.1) Requirement already satisfied: pydantic==1.8.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 155)) (1.8.2) Requirement already satisfied: pydot==1.4.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 156)) (1.4.2) Requirement already satisfied: pyeventsystem==0.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 157)) (0.1.0) Requirement already satisfied: pyfaidx==0.5.9.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 158)) (0.5.9.5) Requirement already satisfied: pygithub==1.55 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 159)) (1.55) Requirement already satisfied: pygments==2.8.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 160)) (2.8.1) Requirement already satisfied: pyinotify==0.9.6 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 161)) (0.9.6) Requirement already satisfied: pyjwt==2.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 162)) (2.1.0) Requirement already satisfied: pykwalify==1.8.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 163)) (1.8.0) Requirement already satisfied: pynacl==1.4.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 164)) (1.4.0) Requirement already satisfied: pyparsing==2.4.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 165)) (2.4.7) Requirement already satisfied: pyperclip==1.8.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 166)) (1.8.2) Requirement already satisfied: pyrsistent==0.17.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 169)) (0.17.3) Requirement already satisfied: pysam==0.16.0.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 170)) (0.16.0.1) Requirement already satisfied: pytest-asyncio==0.15.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 171)) (0.15.1) Requirement already satisfied: pytest-cov==2.11.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 172)) (2.11.1) Requirement already satisfied: pytest-html==3.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 173)) (3.1.1) Requirement already satisfied: pytest-json-report==1.2.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 174)) (1.2.4) Requirement already satisfied: pytest-metadata==1.11.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 175)) (1.11.0) Requirement already satisfied: pytest-mock==3.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 176)) (3.6.0) Requirement already satisfied: pytest-postgresql==2.6.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 177)) (2.6.1) Requirement already satisfied: pytest-pythonpath==0.7.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 178)) (0.7.3) Requirement already satisfied: pytest-shard==0.1.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 179)) (0.1.2) Requirement already satisfied: pytest==6.2.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 180)) (6.2.3) Requirement already satisfied: python-dateutil==2.8.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 181)) (2.8.1) Requirement already satisfied: python-irodsclient==1.0.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 182)) (1.0.0) Requirement already satisfied: python-jose==3.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 183)) (3.2.0) Requirement already satisfied: python-keystoneclient==4.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 184)) (4.1.1) Requirement already satisfied: python-neutronclient==7.2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 185)) (7.2.1) Requirement already satisfied: python-novaclient==17.2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 186)) (17.2.1) Requirement already satisfied: python-swiftclient==3.10.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 187)) (3.10.1) Requirement already satisfied: python3-openid==3.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 188)) (3.2.0) Requirement already satisfied: pytz==2021.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 189)) (2021.1) Requirement already satisfied: pyuwsgi==2.0.19.1.post0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 190)) (2.0.19.1.post0) Requirement already satisfied: pyyaml==5.4.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 191)) (5.4.1) Requirement already satisfied: pyzmq==22.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 192)) (22.0.3) Requirement already satisfied: rdflib-jsonld==0.5.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 193)) (0.5.0) Requirement already satisfied: rdflib==4.2.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 194)) (4.2.2) Requirement already satisfied: recommonmark==0.7.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 195)) (0.7.1) Requirement already satisfied: refgenconf==0.12.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 196)) (0.12.0) Requirement already satisfied: repoze.lru==0.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 197)) (0.7) Requirement already satisfied: requests-oauthlib==1.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 198)) (1.3.0) Requirement already satisfied: requests-toolbelt==0.9.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 199)) (0.9.1) Requirement already satisfied: requests==2.25.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 200)) (2.25.1) Requirement already satisfied: requestsexceptions==1.4.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 201)) (1.4.0) Requirement already satisfied: responses==0.13.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 202)) (0.13.3) Requirement already satisfied: rfc3986==1.4.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 203)) (1.4.0) Requirement already satisfied: routes==2.5.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 204)) (2.5.1) Requirement already satisfied: rsa==4.7.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 205)) (4.7.2) Requirement already satisfied: ruamel.yaml==0.16.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 207)) (0.16.5) Requirement already satisfied: s3transfer==0.3.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 208)) (0.3.7) Requirement already satisfied: schema-salad==7.1.20210316164414 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 209)) (7.1.20210316164414) Requirement already satisfied: selenium==3.141.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 210)) (3.141.0) Requirement already satisfied: setuptools-scm==5.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 211)) (5.0.2) Requirement already satisfied: shellescape==3.4.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 212)) (3.4.1) Requirement already satisfied: simplejson==3.17.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 213)) (3.17.2) Requirement already satisfied: six==1.15.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 214)) (1.15.0) Requirement already satisfied: sniffio==1.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 215)) (1.2.0) Requirement already satisfied: snowballstemmer==2.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 216)) (2.1.0) Requirement already satisfied: social-auth-core==4.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 217)) (4.0.3) Requirement already satisfied: sortedcontainers==2.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 218)) (2.3.0) Requirement already satisfied: sphinx-markdown-tables==0.0.15 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 219)) (0.0.15) Requirement already satisfied: sphinx-rtd-theme==0.5.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 220)) (0.5.2) Requirement already satisfied: sphinx==3.5.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 221)) (3.5.4) Requirement already satisfied: sphinxcontrib-applehelp==1.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 222)) (1.0.2) Requirement already satisfied: sphinxcontrib-devhelp==1.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 223)) (1.0.2) Requirement already satisfied: sphinxcontrib-htmlhelp==1.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 224)) (1.0.3) Requirement already satisfied: sphinxcontrib-jsmath==1.0.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 225)) (1.0.1) Requirement already satisfied: sphinxcontrib-qthelp==1.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 226)) (1.0.3) Requirement already satisfied: sphinxcontrib-serializinghtml==1.1.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 227)) (1.1.4) Requirement already satisfied: sqlalchemy-migrate==0.13.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 228)) (0.13.0) Requirement already satisfied: sqlalchemy==1.4.20 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 229)) (1.4.20) Requirement already satisfied: sqlitedict==1.7.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 230)) (1.7.0) Requirement already satisfied: sqlparse==0.4.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 231)) (0.4.2) Requirement already satisfied: starlette-context==0.3.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 232)) (0.3.2) Requirement already satisfied: starlette==0.14.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 233)) (0.14.2) Requirement already satisfied: statsd==3.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 234)) (3.3.0) Requirement already satisfied: stevedore==3.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 235)) (3.3.0) Requirement already satisfied: svgwrite==1.4.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 236)) (1.4.1) Requirement already satisfied: tempita==0.5.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 237)) (0.5.2) Requirement already satisfied: tenacity==7.0.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 238)) (7.0.0) Requirement already satisfied: testfixtures==6.17.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 239)) (6.17.1) Requirement already satisfied: tifffile==2020.9.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 240)) (2020.9.3) Requirement already satisfied: toml==0.10.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 241)) (0.10.2) Requirement already satisfied: tornado==6.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 242)) (6.1) Requirement already satisfied: tqdm==4.60.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 243)) (4.60.0) Requirement already satisfied: twill==3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 244)) (3.0) Requirement already satisfied: tzlocal==2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 246)) (2.1) Requirement already satisfied: ubiquerg==0.6.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 247)) (0.6.1) Requirement already satisfied: unidecode==1.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 248)) (1.2.0) Requirement already satisfied: uritemplate==3.0.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 249)) (3.0.1) Requirement already satisfied: urllib3==1.26.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 250)) (1.26.4) Requirement already satisfied: uvicorn==0.13.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 251)) (0.13.4) Requirement already satisfied: vine==5.0.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 252)) (5.0.0) Requirement already satisfied: watchdog==2.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 253)) (2.0.3) Requirement already satisfied: wcwidth==0.2.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 254)) (0.2.5) Requirement already satisfied: webencodings==0.5.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 255)) (0.5.1) Requirement already satisfied: webob==1.8.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 256)) (1.8.7) Requirement already satisfied: whoosh==2.7.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 257)) (2.7.4) Requirement already satisfied: wrapt==1.12.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 258)) (1.12.1) Requirement already satisfied: xmlrunner==1.7.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 259)) (1.7.7) Requirement already satisfied: yacman==0.8.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 260)) (0.8.2) Requirement already satisfied: zipstream-new==1.1.8 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 262)) (1.1.8) Requirement already satisfied: cffi>=1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from bcrypt==3.2.0->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 17)) (1.15.0) Requirement already satisfied: colorama>=0.3.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from cmd2==1.5.0->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 44)) (0.4.4) Requirement already satisfied: typing-extensions in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from cwltool==3.0.20201109103151->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 51)) (4.1.1) Requirement already satisfied: setuptools in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from cwltool==3.0.20201109103151->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 51)) (44.0.0) Requirement already satisfied: py>=1.8.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from pytest==6.2.3->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 180)) (1.11.0) Requirement already satisfied: rich>=9.0.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from refgenconf==0.12.0->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 196)) (11.2.0) Requirement already satisfied: pycparser in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from cffi>=1.1->bcrypt==3.2.0->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 17)) (2.21) The Galaxy client has not yet been built and will be built now. yarn install v1.22.17 [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... Done in 41.34s. yarn run v1.22.17 $ NODE_ENV=production gulp && yarn run webpack-production-maps && yarn run save-build-hash [17:13:01] Using gulpfile /tmp/tmp1upz926i/galaxy-dev/client/gulpfile.js [17:13:01] Starting 'default'... [17:13:01] Starting 'fonts'... [17:13:01] Starting 'stageLibs'... [17:13:01] Starting 'buildPlugins'... [17:13:01] Finished 'stageLibs' after 14 ms [17:13:01] Finished 'buildPlugins' after 17 ms [17:13:01] Starting 'cleanPlugins'... [17:13:01] Finished 'fonts' after 26 ms No build hashfile detected for annotate_image, generating now. Installing Dependencies for annotate_image info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. Building annotate_image $ parcel build src/script.js -d static --no-source-maps ✨ Built in 8.69s. static/script.js 424.02 KB 8.36s No build hashfile detected for chiraviz, generating now. Installing Dependencies for chiraviz info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. Building chiraviz $ webpack --mode production Hash: bc470bafb6d4fa387752 Version: webpack 4.46.0 Time: 1529ms Built at: 02/16/2022 5:13:30 PM Asset Size Chunks Chunk Names 448c34a56d699c29117adc64c43affeb.woff2 17.6 KiB [emitted] 674f50d287a8c48dc19ba404d20fe713.eot 162 KiB [emitted] 89889688147bd7575d6327160d64e760.svg 106 KiB [emitted] 912ec66d7572ff821749319396470bde.svg 434 KiB [emitted] [big] af7ae505a9eed503f8b8e6982036873e.woff2 75.4 KiB [emitted] b06871f281fee6b241d60582ae9369b9.ttf 162 KiB [emitted] e18bbf611f2a2e43afc071aa2f4e1512.ttf 44.3 KiB [emitted] f4769f9bdb7466be65088239c12046d1.eot 19.7 KiB [emitted] fa2772327f55d8198301fdb8bcfc8158.woff 22.9 KiB [emitted] fee66e712a8a08eef5805a46892932ad.woff 95.7 KiB [emitted] images/plus-icon.png 2.6 KiB [emitted] images/search-icon.png 9.78 KiB [emitted] main.css 153 KiB 0 [emitted] main script.js 3.72 MiB 0 [emitted] [big] main Entrypoint main [big] = main.css script.js [1] ./src/index.js 390 bytes {0} [built] [4] ./node_modules/script-loader!./src/js/rna-viz.js 318 bytes {0} [built] [5] ./node_modules/raw-loader!./src/js/rna-viz.js 56.8 KiB {0} [built] [10] ./node_modules/script-loader!./src/js/visualize-alignment.js 330 bytes {0} [built] [11] ./node_modules/raw-loader!./src/js/visualize-alignment.js 4.8 KiB {0} [built] [16] ./src/css/rna.viz.css 39 bytes {0} [built] + 14 hidden modules WARNING in asset size limit: The following asset(s) exceed the recommended size limit (244 KiB). This can impact web performance. Assets: 912ec66d7572ff821749319396470bde.svg (434 KiB) script.js (3.72 MiB) WARNING in entrypoint size limit: The following entrypoint(s) combined asset size exceeds the recommended limit (244 KiB). This can impact web performance. Entrypoints: main (3.87 MiB) main.css script.js WARNING in webpack performance recommendations: You can limit the size of your bundles by using import() or require.ensure to lazy load some parts of your application. For more info visit https://webpack.js.org/guides/code-splitting/ Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js!node_modules/bootstrap/dist/css/bootstrap.min.css: Entrypoint mini-css-extract-plugin = * 8 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js!node_modules/font-awesome/css/font-awesome.min.css: Entrypoint mini-css-extract-plugin = * 9 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js!src/css/rna.viz.css: Entrypoint mini-css-extract-plugin = * [0] ./node_modules/css-loader/dist/cjs.js!./src/css/rna.viz.css 4.61 KiB {0} [built] + 1 hidden module No build hashfile detected for editor, generating now. Installing Dependencies for editor info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. Building editor $ webpack --mode production Hash: 0049facab9a1a81ab2fd Version: webpack 4.46.0 Time: 3404ms Built at: 02/16/2022 5:13:39 PM Asset Size Chunks Chunk Names main.css 777 bytes 0 [emitted] main script.js 394 KiB 0 [emitted] [big] main Entrypoint main [big] = main.css script.js [0] (webpack)/buildin/module.js 497 bytes {0} [built] [1] (webpack)/buildin/amd-define.js 85 bytes {0} [built] [2] ./src/index.js 172 bytes {0} [built] [3] ./src/styles/style.css 39 bytes {0} [built] + 4 hidden modules WARNING in asset size limit: The following asset(s) exceed the recommended size limit (244 KiB). This can impact web performance. Assets: script.js (394 KiB) WARNING in entrypoint size limit: The following entrypoint(s) combined asset size exceeds the recommended limit (244 KiB). This can impact web performance. Entrypoints: main (395 KiB) main.css script.js WARNING in webpack performance recommendations: You can limit the size of your bundles by using import() or require.ensure to lazy load some parts of your application. For more info visit https://webpack.js.org/guides/code-splitting/ Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js!src/styles/style.css: Entrypoint mini-css-extract-plugin = * [0] ./node_modules/css-loader/dist/cjs.js!./src/styles/style.css 1.03 KiB {0} [built] + 1 hidden module No build hashfile detected for heatmap_default, generating now. Installing Dependencies for heatmap_default info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. Building heatmap_default $ parcel build src/script.js -d static/dist ✨ Built in 9.07s. static/dist/script.js.map ⚠️ 1.21 MB 76ms static/dist/script.js 360.29 KB 8.63s No build hashfile detected for hyphyvision, generating now. Installing Dependencies for hyphyvision info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. Building hyphyvision $ webpack --mode development Hash: 19951ee18264fd552b31 Version: webpack 4.46.0 Time: 2740ms Built at: 02/16/2022 5:14:12 PM Asset Size Chunks Chunk Names main.css 272 KiB main [emitted] main script.js 5.66 MiB main [emitted] main Entrypoint main = main.css script.js [./node_modules/webpack/buildin/amd-define.js] (webpack)/buildin/amd-define.js 85 bytes {main} [built] [./node_modules/webpack/buildin/amd-options.js] (webpack)/buildin/amd-options.js 80 bytes {main} [built] [./node_modules/webpack/buildin/global.js] (webpack)/buildin/global.js 472 bytes {main} [built] [./node_modules/webpack/buildin/module.js] (webpack)/buildin/module.js 497 bytes {main} [built] [./src/index.js] 215 bytes {main} [built] + 99 hidden modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js!node_modules/hyphy-vision/dist/hyphyvision.css: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js!node_modules/phylotree/phylotree.css: Entrypoint mini-css-extract-plugin = * 2 modules No build hashfile detected for media_player, generating now. Installing Dependencies for media_player info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. Building media_player $ cp node_modules/plyr/dist/plyr.js node_modules/plyr/dist/plyr.css static/dist No build hashfile detected for mvpapp, generating now. Installing Dependencies for mvpapp info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. 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Installing Dependencies for ngl info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. Building ngl $ parcel build src/ngl.js -d static/dist ✨ Built in 16.25s. static/dist/ngl.js.map ⚠️ 2.1 MB 183ms static/dist/ngl.js 958.08 KB 15.73s No build hashfile detected for nora, generating now. Installing Dependencies for nora info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. Building nora $ cpy --cwd='node_modules/@galaxyproject/nora/static/dist' --parents './' '../../../../../static/dist' No build hashfile detected for openlayers, generating now. Installing Dependencies for openlayers info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. Building openlayers $ parcel build src/script.js -d static --no-source-maps npm WARN deprecated babel-preset-es2015@6.24.1: 🙌 Thanks for using Babel: we recommend using babel-preset-env now: please read https://babeljs.io/env to update! npm WARN deprecated core-js@2.6.12: core-js@<3.4 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Please, upgrade your dependencies to the actual version of core-js. npm WARN lifecycle The node binary used for scripts is /tmp/yarn--1645049705295-0.7828872097284614/node but npm is using /home/me/.planemo/gx_venv_3/bin/node itself. Use the `--scripts-prepend-node-path` option to include the path for the node binary npm was executed with. > core-js@2.6.12 postinstall /tmp/tmp1upz926i/galaxy-dev/config/plugins/visualizations/openlayers/node_modules/wkt-parser/node_modules/core-js > node -e "try{require('./postinstall')}catch(e){}" npm notice created a lockfile as package-lock.json. You should commit this file. + babel-preset-es2015@6.24.1 added 66 packages from 14 contributors and audited 66 packages in 3.207s found 0 vulnerabilities ⚠️ Could not infer babel version. Defaulting to babel 7. Please add either babel-core or @babel/core as a dependency. + @babel/core@7.17.4 added 52 packages from 62 contributors and audited 118 packages in 2.432s 3 packages are looking for funding run `npm fund` for details found 0 vulnerabilities ✨ Built in 20.10s. static/script.js ⚠️ 1.33 MB 19.74s No build hashfile detected for openseadragon, generating now. Installing Dependencies for openseadragon info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. Building openseadragon $ cpy --cwd='node_modules/openseadragon/build/openseadragon' --parents './' '../../../../static/dist' No build hashfile detected for pv, generating now. Installing Dependencies for pv info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. Building pv $ parcel build src/pv.js -d static/dist ✨ Built in 3.78s. static/dist/pv.js.map 492.04 KB 44ms static/dist/pv.js 160.92 KB 3.42s No build hashfile detected for new_user, generating now. Installing Dependencies for new_user info No lockfile found. [1/4] Resolving packages... [2/4] Fetching packages... [3/4] Linking dependencies... [4/4] Building fresh packages... success Saved lockfile. 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./src/utils/observable/index.js 897 bytes [built] | + 562 hidden modules [2337] ./src/entry/admin/index.js + 253 modules 272 KiB {7} [built] | ./src/entry/admin/index.js 692 bytes [built] | ./src/entry/admin/AdminRouter.js 7.85 KiB [built] | ./src/entry/panels/admin-panel.js 5.03 KiB [built] | + 251 hidden modules [2338] ./src/entry/login/index.js + 15 modules 14.6 KiB {10} [built] | ./src/entry/login/index.js 1.07 KiB [built] | + 15 hidden modules + 3072 hidden modules WARNING in ./src/components/JobInformation/JobDetails.vue?vue&type=script&lang=js& (./node_modules/babel-loader/lib??ref--2!./node_modules/vue-loader/lib??vue-loader-options!./src/components/JobInformation/JobDetails.vue?vue&type=script&lang=js&) 40:16-26 "export 'JobMetrics' was not found in 'components/JobMetrics/JobMetrics' @ ./src/components/JobInformation/JobDetails.vue?vue&type=script&lang=js& @ ./src/components/JobInformation/JobDetails.vue @ 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Following module has been added: * css ./node_modules/css-loader/dist/cjs.js??ref--8-1!./node_modules/vue-loader/lib/loaders/stylePostLoader.js!./node_modules/postcss-loader/src??ref--8-2!./node_modules/sass-loader/dist/cjs.js??ref--8-3!./node_modules/vue-loader/lib??vue-loader-options!./src/components/Collections/common/ClickToEdit.vue?vue&type=style&index=0&lang=css& despite it was not able to fulfill desired ordering with these modules: * css ./node_modules/css-loader/dist/cjs.js??ref--8-1!./node_modules/vue-loader/lib/loaders/stylePostLoader.js!./node_modules/postcss-loader/src??ref--8-2!./node_modules/sass-loader/dist/cjs.js??ref--8-3!./node_modules/vue-loader/lib??vue-loader-options!./src/components/Collections/UnpairedDatasetElementView.vue?vue&type=style&index=0&lang=css& - couldn't fulfill desired order of chunk group(s) PairedListCollectionCreator - while fulfilling desired order of chunk group(s) analysis WARNING in core-js Multiple versions of core-js found: 2.6.5 ./~/@babel/polyfill/~/core-js 3.18.3 ./~/core-js WARNING in es-abstract Multiple versions of es-abstract found: 1.17.7 ./~/regexp.prototype.flags/~/es-abstract 1.18.0-next.1 ./~/es-abstract WARNING in isarray Multiple versions of isarray found: 1.0.0 ./~/isarray 2.0.5 ./~/deep-equal/~/isarray WARNING in lodash Multiple versions of lodash found: 4.17.11 ./~/vueisotope/~/lodash 4.17.20 ./~/lodash WARNING in object-keys Multiple versions of object-keys found: 1.0.12 ./~/define-properties/~/object-keys 1.1.1 ./~/object-keys WARNING in tslib Multiple versions of tslib found: 1.13.0 ./~/tslib 1.9.3 ./~/rxjs/~/tslib Check how you can resolve duplicate packages: https://github.com/darrenscerri/duplicate-package-checker-webpack-plugin#resolving-duplicate-packages-in-your-bundle WARNING in asset size limit: The following asset(s) exceed the recommended size limit (244 KiB). 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node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Collections/PairedListCollectionCreator.vue?vue&type=style&index=0&lang=scss&: Entrypoint mini-css-extract-plugin = * 13 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Collections/UnpairedDatasetElementView.vue?vue&type=style&index=0&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Collections/common/ClickToEdit.vue?vue&type=style&index=0&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Collections/common/CollectionCreator.vue?vue&type=style&index=0&lang=scss&: Entrypoint mini-css-extract-plugin = * 13 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Dataset/DatasetName.vue?vue&type=style&index=0&id=1281dd7a&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Details/DatasetDetails.vue?vue&type=style&index=0&id=02a2f964&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/DisplayStructured.vue?vue&type=style&index=0&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/History/ContentItem/DatasetCollection/DscUI.vue?vue&type=style&index=0&id=743fa609&lang=scss&scoped=true&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/History/ContentOperations.vue?vue&type=style&index=0&lang=scss&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/History/CopyModal.vue?vue&type=style&index=0&lang=scss&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/History/EditorMenu.vue?vue&type=style&index=0&lang=scss&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/History/Layout.vue?vue&type=style&index=0&lang=scss&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/History/Scroller.vue?vue&type=style&index=0&lang=scss&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/HistoryImport.vue?vue&type=style&index=0&id=d5384606&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/HistoryView.vue?vue&type=style&index=0&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/IconButton.vue?vue&type=style&index=0&lang=scss&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/InheritanceChain/InheritanceChain.vue?vue&type=style&index=0&id=0afaa094&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/JobInformation/CodeRow.vue?vue&type=style&index=0&id=93f9174e&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin 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node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Libraries/LibraryEditField.vue?vue&type=style&index=0&id=4f27b8df&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Libraries/LibraryFolder/LibraryFolder.vue?vue&type=style&index=0&id=6dc9e6a0&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 4 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Libraries/LibraryFolder/LibraryFolderPermissions/LibraryFolderDatasetPermissions.vue?vue&type=style&index=0&id=2eae96c7&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Libraries/LibraryFolder/TopToolbar/FolderTopBar.vue?vue&type=style&index=0&id=1ad141ff&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 3 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Libraries/LibraryPermissions/LibraryPermissions.vue?vue&type=style&index=0&id=78a5d8a1&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Libraries/LibraryPermissions/PermissionsHeader.vue?vue&type=style&index=0&id=31d68c8f&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Libraries/LibraryPermissions/PermissionsInputField.vue?vue&type=style&index=0&id=5b6f0fb4&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Markdown/Elements/HistoryDatasetCollection/CollectionDisplay.vue?vue&type=style&index=0&id=cd677236&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Markdown/Elements/HistoryDatasetDisplay.vue?vue&type=style&index=0&id=c4342bf0&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Markdown/Elements/ToolStd.vue?vue&type=style&index=0&id=45bb71b8&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Markdown/Elements/Workflow/WorkflowDisplay.vue?vue&type=style&index=0&id=4043db7e&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Markdown/Markdown.vue?vue&type=style&index=0&id=faf156e2&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Markdown/MarkdownVisualization.vue?vue&type=style&index=0&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Nametags/Nametag.vue?vue&type=style&index=0&lang=scss&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/Nametags/Nametags.vue?vue&type=style&index=0&lang=scss&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/NewUserWelcome/NewUserWelcome.vue?vue&type=style&index=0&id=534d2a22&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/NewUserWelcome/components/Subtopics.vue?vue&type=style&index=0&id=11ab82ad&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin node_modules/css-loader/dist/cjs.js??ref--8-1!node_modules/vue-loader/lib/loaders/stylePostLoader.js!node_modules/postcss-loader/src/index.js??ref--8-2!node_modules/sass-loader/dist/cjs.js??ref--8-3!node_modules/vue-loader/lib/index.js??vue-loader-options!src/components/NewUserWelcome/components/Topics.vue?vue&type=style&index=0&id=590b7be1&scoped=true&lang=css&: Entrypoint mini-css-extract-plugin = * 2 modules Child mini-css-extract-plugin 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>../static/client_build_hash.txt Done in 372.09s. /tmp/tmp1upz926i/galaxy-dev Starting Galaxy with command [cd /tmp/tmp1upz926i/galaxy-dev && if [ -d .venv ]; then GALAXY_VIRTUAL_ENV=.venv; else GALAXY_VIRTUAL_ENV=/home/me/.planemo/gx_venv_3; fi && export GALAXY_VIRTUAL_ENV && if [ ! -e "$GALAXY_VIRTUAL_ENV" ]; then /usr/bin/python3 -m venv $GALAXY_VIRTUAL_ENV; echo "Created virtualenv"; fi && if [ -e "$GALAXY_VIRTUAL_ENV" ]; then . "$GALAXY_VIRTUAL_ENV"/bin/activate; echo "Activated a virtualenv for Galaxy"; echo "$VIRTUAL_ENV"; else echo "Failed to activate virtualenv."; fi && COMMON_STARTUP_ARGS=; $(grep -q 'skip-venv' run_tests.sh) && COMMON_STARTUP_ARGS="--dev-wheels"; export COMMON_STARTUP_ARGS; echo "Set COMMON_STARTUP_ARGS to ${COMMON_STARTUP_ARGS}" && /tmp/tmp1upz926i/galaxy-dev/run.sh $COMMON_STARTUP_ARGS --server-name main] Activated a virtualenv for Galaxy /home/me/.planemo/gx_venv_3 Set COMMON_STARTUP_ARGS to --dev-wheels Activating virtualenv at /home/me/.planemo/gx_venv_3 Requirement already satisfied: pip>=19.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (20.0.2) Ignoring async-exit-stack: markers 'python_version >= "3.6" and python_version < "3.7"' don't match your environment Ignoring async-generator: markers 'python_version < "3.7" and python_version >= "3.6"' don't match your environment Ignoring atomicwrites: markers 'python_version >= "3.6" and python_full_version < "3.0.0" and sys_platform == "win32" or sys_platform == "win32" and python_version >= "3.6" and python_full_version >= "3.4.0"' don't match your environment Ignoring cached-property: markers 'python_version < "3.8" and python_version >= "3.6"' don't match your environment Ignoring cffi: markers 'implementation_name == "pypy" and python_version >= "3.6" and (python_version >= "2.7" and python_full_version < "3.0.0" or python_full_version >= "3.4.0")' don't match your environment Ignoring colorama: markers 'python_version >= "3.6" and python_full_version < "3.0.0" and sys_platform == "win32" or sys_platform == "win32" and python_version >= "3.6" and python_full_version >= "3.5.0"' don't match your environment Ignoring contextvars: markers 'python_version < "3.7" and python_version >= "3.6"' don't match your environment Ignoring dataclasses: markers 'python_version >= "3.6" and python_version < "3.7"' don't match your environment Ignoring immutables: markers 'python_version >= "3.6" and python_version < "3.7"' don't match your environment Ignoring importlib-metadata: markers 'python_version < "3.8" and python_version >= "3.6" and (python_version == "3.6" or python_version == "3.7") and (python_version >= "3.6" and python_full_version < "3.0.0" and python_version < "3.8" or python_full_version >= "3.4.0" and python_version >= "3.6" and python_version < "3.8")' don't match your environment Ignoring importlib-resources: markers 'python_version < "3.7" and python_version >= "3.6"' don't match your environment Ignoring py: markers 'python_version >= "3.6" and python_full_version < "3.0.0" and implementation_name == "pypy" or python_full_version >= "3.4.0" and python_version >= "3.6" and implementation_name == "pypy"' don't match your environment Ignoring pycparser: markers 'python_version >= "3.6" and python_full_version < "3.0.0" and implementation_name == "pypy" or implementation_name == "pypy" and python_version >= "3.6" and python_full_version >= "3.4.0"' don't match your environment Ignoring pyreadline3: markers 'sys_platform == "win32" and python_version >= "3.8"' don't match your environment Ignoring pyreadline: markers 'python_version >= "3.6" and python_full_version < "3.0.0" and python_version < "3.8" and sys_platform == "win32" or python_version >= "3.6" and python_version < "3.8" and python_full_version >= "3.5.0" and sys_platform == "win32"' don't match your environment Ignoring ruamel.yaml.clib: markers 'platform_python_implementation == "CPython" and python_version < "3.8" and python_version >= "3.6"' don't match your environment Ignoring typing-extensions: markers 'python_version >= "3.6" and python_version < "3.8"' don't match your environment Ignoring zipp: markers 'python_version < "3.7" and python_version >= "3.6"' don't match your environment Looking in indexes: https://wheels.galaxyproject.org/simple, https://pypi.python.org/simple, https://wheels.galaxyproject.org/simple Requirement already satisfied: adal==1.2.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 3)) (1.2.7) Requirement already satisfied: aiofiles==0.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 4)) (0.6.0) Requirement already satisfied: alabaster==0.7.12 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 5)) (0.7.12) Requirement already satisfied: amqp==5.0.6 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 6)) (5.0.6) Requirement already satisfied: appdirs==1.4.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 7)) (1.4.4) Requirement already satisfied: argcomplete==1.12.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 8)) (1.12.3) Requirement already satisfied: attmap==0.13.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 12)) (0.13.0) Requirement already satisfied: attrs==20.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 13)) (20.3.0) Requirement already satisfied: babel==2.9.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 14)) (2.9.0) Requirement already satisfied: bagit-profile==1.3.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 15)) (1.3.1) Requirement already satisfied: bagit==1.8.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 16)) (1.8.1) Requirement already satisfied: bcrypt==3.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 17)) (3.2.0) Requirement already satisfied: bdbag==1.6.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 18)) (1.6.1) Requirement already satisfied: beaker==1.11.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 19)) (1.11.0) Requirement already satisfied: billiard==3.6.4.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 20)) (3.6.4.0) Requirement already satisfied: bioblend==0.15.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 21)) (0.15.0) Requirement already satisfied: bleach==3.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 22)) (3.3.0) Requirement already satisfied: boltons==20.2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 23)) (20.2.1) Requirement already satisfied: boto3==1.16.63 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 24)) (1.16.63) Requirement already satisfied: boto==2.49.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 25)) (2.49.0) Requirement already satisfied: botocore==1.19.63 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 26)) (1.19.63) Requirement already satisfied: bx-python==0.8.11 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 27)) (0.8.11) Requirement already satisfied: cachecontrol==0.11.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 28)) (0.11.7) Requirement already satisfied: cachetools==4.2.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 30)) (4.2.2) Requirement already satisfied: celery==5.0.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 31)) (5.0.5) Requirement already satisfied: certifi==2020.12.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 32)) (2020.12.5) Requirement already satisfied: chardet==4.0.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 34)) (4.0.0) Requirement already satisfied: cheetah3==3.2.6.post1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 35)) (3.2.6.post1) Requirement already satisfied: circus==0.17.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 36)) (0.17.1) Requirement already satisfied: click-didyoumean==0.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 37)) (0.0.3) Requirement already satisfied: click-plugins==1.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 38)) (1.1.1) Requirement already satisfied: click-repl==0.1.6 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 39)) (0.1.6) Requirement already satisfied: click==7.1.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 40)) (7.1.2) Requirement already satisfied: cliff==3.7.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 41)) (3.7.0) Requirement already satisfied: cloudauthz==0.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 42)) (0.6.0) Requirement already satisfied: cloudbridge==2.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 43)) (2.1.0) Requirement already satisfied: cmd2==1.5.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 44)) (1.5.0) Requirement already satisfied: coloredlogs==15.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 46)) (15.0) Requirement already satisfied: commonmark==0.9.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 47)) (0.9.1) Requirement already satisfied: coverage==5.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 49)) (5.5) Requirement already satisfied: cryptography==3.4.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 50)) (3.4.7) Requirement already satisfied: cwltool==3.0.20201109103151 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 51)) (3.0.20201109103151) Requirement already satisfied: debtcollector==2.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 53)) (2.2.0) Requirement already satisfied: decorator==5.0.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 54)) (5.0.7) Requirement already satisfied: defusedxml==0.7.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 55)) (0.7.1) Requirement already satisfied: deprecated==1.2.12 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 56)) (1.2.12) Requirement already satisfied: deprecation==2.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 57)) (2.1.0) Requirement already satisfied: dictobj==0.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 58)) (0.4) Requirement already satisfied: docopt==0.6.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 59)) (0.6.2) Requirement already satisfied: docutils==0.16 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 60)) (0.16) Requirement already satisfied: dogpile.cache==1.1.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 61)) (1.1.2) Requirement already satisfied: ecdsa==0.14.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 62)) (0.14.1) Requirement already satisfied: edam-ontology==1.25.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 63)) (1.25.2) Requirement already satisfied: fabric3==1.14.post1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 64)) (1.14.post1) Requirement already satisfied: fastapi-utils==0.2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 65)) (0.2.1) Requirement already satisfied: fastapi==0.65.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 66)) (0.65.2) Requirement already satisfied: fluent-logger==0.10.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 67)) (0.10.0) Requirement already satisfied: fs==2.4.13 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 68)) (2.4.13) Requirement already satisfied: funcsigs==1.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 69)) (1.0.2) Requirement already satisfied: future==0.18.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 70)) (0.18.2) Requirement already satisfied: galaxy-sequence-utils==1.1.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 71)) (1.1.5) Requirement already satisfied: google-api-core==1.26.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 72)) (1.26.3) Requirement already satisfied: google-api-python-client==1.12.8 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 73)) (1.12.8) Requirement already satisfied: google-auth-httplib2==0.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 74)) (0.1.0) Requirement already satisfied: google-auth==1.30.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 75)) (1.30.0) Requirement already satisfied: googleapis-common-protos==1.53.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 76)) (1.53.0) Requirement already satisfied: greenlet==1.0.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 77)) (1.0.0) Requirement already satisfied: gunicorn==20.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 78)) (20.1.0) Requirement already satisfied: gxformat2==0.15.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 79)) (0.15.0) Requirement already satisfied: h11==0.12.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 80)) (0.12.0) Requirement already satisfied: h5py==3.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 81)) (3.1.0) Requirement already satisfied: httpcore==0.13.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 82)) (0.13.0) Requirement already satisfied: httplib2==0.19.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 83)) (0.19.1) Requirement already satisfied: httpx==0.18.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 84)) (0.18.0) Requirement already satisfied: humanfriendly==9.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 85)) (9.1) Requirement already satisfied: idna==2.10 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 86)) (2.10) Requirement already satisfied: imagesize==1.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 87)) (1.2.0) Requirement already satisfied: iniconfig==1.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 91)) (1.1.1) Requirement already satisfied: isa-rwval==0.10.10 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 92)) (0.10.10) Requirement already satisfied: iso8601==0.1.14 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 93)) (0.1.14) Requirement already satisfied: isodate==0.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 94)) (0.6.0) Requirement already satisfied: jinja2==2.11.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 95)) (2.11.3) Requirement already satisfied: jmespath==0.10.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 96)) (0.10.0) Requirement already satisfied: jsonpatch==1.32 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 97)) (1.32) Requirement already satisfied: jsonpointer==2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 98)) (2.1) Requirement already satisfied: jsonschema==3.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 99)) (3.2.0) Requirement already satisfied: keystoneauth1==4.3.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 100)) (4.3.1) Requirement already satisfied: kombu==5.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 101)) (5.0.2) Requirement already satisfied: lagom==1.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 102)) (1.2.0) Requirement already satisfied: lockfile==0.12.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 103)) (0.12.2) Requirement already satisfied: lxml==4.6.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 104)) (4.6.3) Requirement already satisfied: mako==1.1.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 105)) (1.1.4) Requirement already satisfied: markdown-it-reporter==0.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 106)) (0.0.2) Requirement already satisfied: markdown==3.3.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 107)) (3.3.4) Requirement already satisfied: markupsafe==1.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 108)) (1.1.1) Requirement already satisfied: mercurial==5.7.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 109)) (5.7.1) Requirement already satisfied: mirakuru==2.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 110)) (2.3.0) Requirement already satisfied: mistune==0.8.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 111)) (0.8.4) Requirement already satisfied: mrcfile==1.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 112)) (1.3.0) Requirement already satisfied: msgpack==1.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 113)) (1.0.2) Requirement already satisfied: munch==2.5.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 114)) (2.5.0) Requirement already satisfied: mypy-extensions==0.4.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 115)) (0.4.3) Requirement already satisfied: netaddr==0.8.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 116)) (0.8.0) Requirement already satisfied: netifaces==0.10.9 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 117)) (0.10.9) Requirement already satisfied: networkx==2.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 118)) (2.5) Requirement already satisfied: nodeenv==1.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 119)) (1.6.0) Requirement already satisfied: nose==1.3.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 120)) (1.3.7) Requirement already satisfied: nosehtml==0.4.6 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 121)) (0.4.6) Requirement already satisfied: numpy==1.19.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 122)) (1.19.5) Requirement already satisfied: oauth2client==4.1.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 123)) (4.1.3) Requirement already satisfied: oauthlib==3.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 124)) (3.1.0) Requirement already satisfied: openstacksdk==0.52.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 125)) (0.52.0) Requirement already satisfied: os-client-config==2.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 126)) (2.1.0) Requirement already satisfied: os-service-types==1.7.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 127)) (1.7.0) Requirement already satisfied: osc-lib==2.3.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 128)) (2.3.1) Requirement already satisfied: oslo.config==8.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 129)) (8.6.0) Requirement already satisfied: oslo.context==3.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 130)) (3.2.0) Requirement already satisfied: oslo.i18n==5.0.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 131)) (5.0.1) Requirement already satisfied: oslo.log==4.4.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 132)) (4.4.0) Requirement already satisfied: oslo.serialization==4.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 133)) (4.1.0) Requirement already satisfied: oslo.utils==4.8.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 134)) (4.8.0) Requirement already satisfied: oyaml==1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 135)) (1.0) Requirement already satisfied: packaging==20.9 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 136)) (20.9) Requirement already satisfied: paramiko==2.7.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 137)) (2.7.2) Requirement already satisfied: parsley==1.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 138)) (1.3) Requirement already satisfied: paste==3.5.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 139)) (3.5.0) Requirement already satisfied: pastedeploy==2.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 140)) (2.1.1) Requirement already satisfied: pbr==5.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 141)) (5.6.0) Requirement already satisfied: pluggy==0.13.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 142)) (0.13.1) Requirement already satisfied: port-for==0.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 143)) (0.4) Requirement already satisfied: prettytable==0.7.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 144)) (0.7.2) Requirement already satisfied: prompt-toolkit==3.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 145)) (3.0.3) Requirement already satisfied: protobuf==3.15.8 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 146)) (3.15.8) Requirement already satisfied: prov==1.5.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 147)) (1.5.1) Requirement already satisfied: psutil==5.8.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 148)) (5.8.0) Requirement already satisfied: pulsar-galaxy-lib==0.14.10 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 149)) (0.14.10) Requirement already satisfied: pyasn1-modules==0.2.8 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 151)) (0.2.8) Requirement already satisfied: pyasn1==0.4.8 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 152)) (0.4.8) Requirement already satisfied: pycryptodome==3.10.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 154)) (3.10.1) Requirement already satisfied: pydantic==1.8.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 155)) (1.8.2) Requirement already satisfied: pydot==1.4.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 156)) (1.4.2) Requirement already satisfied: pyeventsystem==0.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 157)) (0.1.0) Requirement already satisfied: pyfaidx==0.5.9.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 158)) (0.5.9.5) Requirement already satisfied: pygithub==1.55 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 159)) (1.55) Requirement already satisfied: pygments==2.8.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 160)) (2.8.1) Requirement already satisfied: pyinotify==0.9.6 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 161)) (0.9.6) Requirement already satisfied: pyjwt==2.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 162)) (2.1.0) Requirement already satisfied: pykwalify==1.8.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 163)) (1.8.0) Requirement already satisfied: pynacl==1.4.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 164)) (1.4.0) Requirement already satisfied: pyparsing==2.4.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 165)) (2.4.7) Requirement already satisfied: pyperclip==1.8.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 166)) (1.8.2) Requirement already satisfied: pyrsistent==0.17.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 169)) (0.17.3) Requirement already satisfied: pysam==0.16.0.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 170)) (0.16.0.1) Requirement already satisfied: pytest-asyncio==0.15.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 171)) (0.15.1) Requirement already satisfied: pytest-cov==2.11.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 172)) (2.11.1) Requirement already satisfied: pytest-html==3.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 173)) (3.1.1) Requirement already satisfied: pytest-json-report==1.2.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 174)) (1.2.4) Requirement already satisfied: pytest-metadata==1.11.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 175)) (1.11.0) Requirement already satisfied: pytest-mock==3.6.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 176)) (3.6.0) Requirement already satisfied: pytest-postgresql==2.6.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 177)) (2.6.1) Requirement already satisfied: pytest-pythonpath==0.7.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 178)) (0.7.3) Requirement already satisfied: pytest-shard==0.1.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 179)) (0.1.2) Requirement already satisfied: pytest==6.2.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 180)) (6.2.3) Requirement already satisfied: python-dateutil==2.8.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 181)) (2.8.1) Requirement already satisfied: python-irodsclient==1.0.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 182)) (1.0.0) Requirement already satisfied: python-jose==3.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 183)) (3.2.0) Requirement already satisfied: python-keystoneclient==4.1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 184)) (4.1.1) Requirement already satisfied: python-neutronclient==7.2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 185)) (7.2.1) Requirement already satisfied: python-novaclient==17.2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 186)) (17.2.1) Requirement already satisfied: python-swiftclient==3.10.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 187)) (3.10.1) Requirement already satisfied: python3-openid==3.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 188)) (3.2.0) Requirement already satisfied: pytz==2021.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 189)) (2021.1) Requirement already satisfied: pyuwsgi==2.0.19.1.post0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 190)) (2.0.19.1.post0) Requirement already satisfied: pyyaml==5.4.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 191)) (5.4.1) Requirement already satisfied: pyzmq==22.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 192)) (22.0.3) Requirement already satisfied: rdflib-jsonld==0.5.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 193)) (0.5.0) Requirement already satisfied: rdflib==4.2.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 194)) (4.2.2) Requirement already satisfied: recommonmark==0.7.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 195)) (0.7.1) Requirement already satisfied: refgenconf==0.12.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 196)) (0.12.0) Requirement already satisfied: repoze.lru==0.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 197)) (0.7) Requirement already satisfied: requests-oauthlib==1.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 198)) (1.3.0) Requirement already satisfied: requests-toolbelt==0.9.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 199)) (0.9.1) Requirement already satisfied: requests==2.25.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 200)) (2.25.1) Requirement already satisfied: requestsexceptions==1.4.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 201)) (1.4.0) Requirement already satisfied: responses==0.13.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 202)) (0.13.3) Requirement already satisfied: rfc3986==1.4.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 203)) (1.4.0) Requirement already satisfied: routes==2.5.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 204)) (2.5.1) Requirement already satisfied: rsa==4.7.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 205)) (4.7.2) Requirement already satisfied: ruamel.yaml==0.16.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 207)) (0.16.5) Requirement already satisfied: s3transfer==0.3.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 208)) (0.3.7) Requirement already satisfied: schema-salad==7.1.20210316164414 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 209)) (7.1.20210316164414) Requirement already satisfied: selenium==3.141.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 210)) (3.141.0) Requirement already satisfied: setuptools-scm==5.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 211)) (5.0.2) Requirement already satisfied: shellescape==3.4.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 212)) (3.4.1) Requirement already satisfied: simplejson==3.17.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 213)) (3.17.2) Requirement already satisfied: six==1.15.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 214)) (1.15.0) Requirement already satisfied: sniffio==1.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 215)) (1.2.0) Requirement already satisfied: snowballstemmer==2.1.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 216)) (2.1.0) Requirement already satisfied: social-auth-core==4.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 217)) (4.0.3) Requirement already satisfied: sortedcontainers==2.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 218)) (2.3.0) Requirement already satisfied: sphinx-markdown-tables==0.0.15 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 219)) (0.0.15) Requirement already satisfied: sphinx-rtd-theme==0.5.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 220)) (0.5.2) Requirement already satisfied: sphinx==3.5.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 221)) (3.5.4) Requirement already satisfied: sphinxcontrib-applehelp==1.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 222)) (1.0.2) Requirement already satisfied: sphinxcontrib-devhelp==1.0.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 223)) (1.0.2) Requirement already satisfied: sphinxcontrib-htmlhelp==1.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 224)) (1.0.3) Requirement already satisfied: sphinxcontrib-jsmath==1.0.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 225)) (1.0.1) Requirement already satisfied: sphinxcontrib-qthelp==1.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 226)) (1.0.3) Requirement already satisfied: sphinxcontrib-serializinghtml==1.1.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 227)) (1.1.4) Requirement already satisfied: sqlalchemy-migrate==0.13.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 228)) (0.13.0) Requirement already satisfied: sqlalchemy==1.4.20 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 229)) (1.4.20) Requirement already satisfied: sqlitedict==1.7.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 230)) (1.7.0) Requirement already satisfied: sqlparse==0.4.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 231)) (0.4.2) Requirement already satisfied: starlette-context==0.3.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 232)) (0.3.2) Requirement already satisfied: starlette==0.14.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 233)) (0.14.2) Requirement already satisfied: statsd==3.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 234)) (3.3.0) Requirement already satisfied: stevedore==3.3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 235)) (3.3.0) Requirement already satisfied: svgwrite==1.4.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 236)) (1.4.1) Requirement already satisfied: tempita==0.5.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 237)) (0.5.2) Requirement already satisfied: tenacity==7.0.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 238)) (7.0.0) Requirement already satisfied: testfixtures==6.17.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 239)) (6.17.1) Requirement already satisfied: tifffile==2020.9.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 240)) (2020.9.3) Requirement already satisfied: toml==0.10.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 241)) (0.10.2) Requirement already satisfied: tornado==6.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 242)) (6.1) Requirement already satisfied: tqdm==4.60.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 243)) (4.60.0) Requirement already satisfied: twill==3.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 244)) (3.0) Requirement already satisfied: tzlocal==2.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 246)) (2.1) Requirement already satisfied: ubiquerg==0.6.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 247)) (0.6.1) Requirement already satisfied: unidecode==1.2.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 248)) (1.2.0) Requirement already satisfied: uritemplate==3.0.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 249)) (3.0.1) Requirement already satisfied: urllib3==1.26.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 250)) (1.26.4) Requirement already satisfied: uvicorn==0.13.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 251)) (0.13.4) Requirement already satisfied: vine==5.0.0 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 252)) (5.0.0) Requirement already satisfied: watchdog==2.0.3 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 253)) (2.0.3) Requirement already satisfied: wcwidth==0.2.5 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 254)) (0.2.5) Requirement already satisfied: webencodings==0.5.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 255)) (0.5.1) Requirement already satisfied: webob==1.8.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 256)) (1.8.7) Requirement already satisfied: whoosh==2.7.4 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 257)) (2.7.4) Requirement already satisfied: wrapt==1.12.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 258)) (1.12.1) Requirement already satisfied: xmlrunner==1.7.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 259)) (1.7.7) Requirement already satisfied: yacman==0.8.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 260)) (0.8.2) Requirement already satisfied: zipstream-new==1.1.8 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r ./lib/galaxy/dependencies/dev-requirements.txt (line 262)) (1.1.8) Requirement already satisfied: cffi>=1.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from bcrypt==3.2.0->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 17)) (1.15.0) Requirement already satisfied: colorama>=0.3.7 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from cmd2==1.5.0->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 44)) (0.4.4) Requirement already satisfied: typing-extensions in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from cwltool==3.0.20201109103151->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 51)) (4.1.1) Requirement already satisfied: setuptools in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from cwltool==3.0.20201109103151->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 51)) (44.0.0) Requirement already satisfied: py>=1.8.2 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from pytest==6.2.3->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 180)) (1.11.0) Requirement already satisfied: rich>=9.0.1 in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from refgenconf==0.12.0->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 196)) (11.2.0) Requirement already satisfied: pycparser in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from cffi>=1.1->bcrypt==3.2.0->-r ./lib/galaxy/dependencies/dev-requirements.txt (line 17)) (2.21) Looking in indexes: https://wheels.galaxyproject.org/simple, https://pypi.python.org/simple Requirement already satisfied: watchdog in /home/me/.planemo/gx_venv_3/lib/python3.8/site-packages (from -r /dev/stdin (line 1)) (2.0.3) The Galaxy client build is up to date and will not be rebuilt at this time. Activating virtualenv at /home/me/.planemo/gx_venv_3 Executing: gunicorn --pythonpath lib --paste "/tmp/tmp1upz926i/galaxy.ini"