Mercurial > repos > nikos > bigwig_to_wig

diff bigwig_to_wig.xml @ 2:bce77c02cc5f draft

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Fixed tool dependency errors
author nikos
date Tue, 05 Aug 2014 09:03:05 -0400
parents 561c9a746a81
children
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--- a/bigwig_to_wig.xml	Tue Aug 05 07:51:14 2014 -0400
+++ b/bigwig_to_wig.xml	Tue Aug 05 09:03:05 2014 -0400
@@ -1,9 +1,9 @@
 <tool id="bigwig_to_wig" name="BigWig to Wig" version="1.0.2">
     <description>converter</description>
-    <command>bigwig_to_wig.sh -f $input -b $bin_size -l $mylab > $output </command>
+    <command interpreter="bash">bigwig_to_wig.sh -f $input -b $bin_size -l $mylab > $output </command>
   <requirements>
-      <requirement type="package">bigWigSummary</requirement>
-      <requirement type="package">bigWigInfo</requirement>
+      <requirement type="package" version="1.0">bigWigSummary</requirement>
+      <requirement type="package" version="1.0">bigWigInfo</requirement>
   </requirements>
   <inputs>
       <param format="bigwig" name="input" type="data" label="BigWig file to convert" />