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23
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <set_environment version="1.0">
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4 <environment_variable action="set_to" name="FQVAL_SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable>
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5 </set_environment>
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6 <package name="fastq_validator" version="1.0.0">
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7 <install version="1.0">
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8 <actions>
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9 <action type="download_file">http://genome.sph.umich.edu/w/images/2/20/FastQValidatorLibStatGen.0.1.1a.tgz</action>
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10 <action type="shell_command">tar xvf FastQValidatorLibStatGen.0.1.1a.tgz</action>
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11 <action type="shell_command">cd fastQValidator_0.1.1a</action>
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12 <action type="shell command">make all</action>
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13 <action type="set_environment">
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14 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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15 </action>
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16 </actions>
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17 </install>
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18 <readme>
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19 View the FastQ Validator overview at http://genome.sph.umich.edu/wiki/FastQValidator.
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20 </readme>
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21 <repository changeset_revision="458c8de5e552" name="fastq_validator" owner="nilesh" toolshed="http://toolshed.g2.bx.psu.edu" />
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22 </package>
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23 </tool_dependency>
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