Mercurial > repos > nilesh > fastq_validator
diff tool_dependencies.xml @ 23:1547a2918126 draft
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author | nilesh |
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date | Wed, 26 Jun 2013 21:11:19 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Wed Jun 26 21:11:19 2013 -0400 @@ -0,0 +1,23 @@ +<?xml version="1.0"?> +<tool_dependency> + <set_environment version="1.0"> + <environment_variable action="set_to" name="FQVAL_SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable> + </set_environment> + <package name="fastq_validator" version="1.0.0"> + <install version="1.0"> + <actions> + <action type="download_file">http://genome.sph.umich.edu/w/images/2/20/FastQValidatorLibStatGen.0.1.1a.tgz</action> + <action type="shell_command">tar xvf FastQValidatorLibStatGen.0.1.1a.tgz</action> + <action type="shell_command">cd fastQValidator_0.1.1a</action> + <action type="shell command">make all</action> + <action type="set_environment"> + <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> + </action> + </actions> + </install> + <readme> + View the FastQ Validator overview at http://genome.sph.umich.edu/wiki/FastQValidator. + </readme> + <repository changeset_revision="458c8de5e552" name="fastq_validator" owner="nilesh" toolshed="http://toolshed.g2.bx.psu.edu" /> + </package> +</tool_dependency>