Mercurial > repos > nilesh > fastq_validator
view tool_dependencies.xml @ 30:5cdeeb572e5b draft
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author | nilesh |
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date | Thu, 27 Jun 2013 11:13:11 -0400 |
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<?xml version="1.0"?> <tool_dependency> <package name="libStatGen" version="1.0.0"> <install version="1.0"> <actions> <action type="shell_command">git clone https://github.com/statgen/libStatGen.git</action> <action type="shell command">git reset --hard c73a8cde531c624bfd335d2f5cc5067444e0b3dd</action> <action type="shell command">sudo apt-get install g++ libssl-dev zlib1g-dev</action> <action type="shell command">make</action> <action type="set_environment"> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> </action> </actions> </install> <readme> View the FastQ Validator overview at http://genome.sph.umich.edu/wiki/FastQValidator. </readme> <repository changeset_revision="556ca790e027" name="fastq_validator" owner="nilesh" toolshed="http://toolshed.g2.bx.psu.edu" /> </package> <!-- <package name="fastq_validator" version="1.0.0"> <install version="1.0"> <actions> <action type="download_file">http://genome.sph.umich.edu/w/images/2/20/FastQValidatorLibStatGen.0.1.1a.tgz</action> <action type="shell_command">tar xvf FastQValidatorLibStatGen.0.1.1a.tgz</action> <action type="shell command">make all</action> <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> </action> </actions> </install> <readme> View the FastQ Validator overview at http://genome.sph.umich.edu/wiki/FastQValidator. </readme> <repository name="fastq_validator" owner="nilesh" toolshed="http://toolshed.g2.bx.psu.edu" /> </package> --> </tool_dependency>