annotate tool_dependencies.xml @ 1:5c0e1d2d674e default tip

first commit
author nilesh
date Fri, 12 Jul 2013 15:25:51 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
1 <?xml version="1.0"?>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
2 <tool_dependency>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
3 <package name="fastq_validator" version="1.0.0">
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
4 <install version="1.0">
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
5 <actions>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
6 <action type="download_by_url" target_filename="fastQValidator_0.1.1a.tgz">
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
7 http://genome.sph.umich.edu/w/images/2/20/FastQValidatorLibStatGen.0.1.1a.tgz
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
8 </action>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
9 <action type="shell_command">make all</action>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
10 <action type="move_file">
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
11 <source>fastQValidator/bin</source>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
12 <destination>$INSTALL_DIR</destination>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
13 </action>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
14 <action type="set_environment">
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
16 </action>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
17 </actions>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
18 </install>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
19 <readme>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
20 View the FastQ Validator overview at http://genome.sph.umich.edu/wiki/FastQValidator.
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
21 </readme>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
22 </package>
5c0e1d2d674e first commit
nilesh
parents:
diff changeset
23 </tool_dependency>