Mercurial > repos > nilesh > rseqc
annotate README.txt @ 36:cd98580c35e3
Removed non-ascii unicode from README.txt, caused issues with toolshed rendering
author | lparsons |
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date | Tue, 22 Jul 2014 16:55:54 -0400 |
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1 == RSeQC Galaxy Wrapper == |
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2 |
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3 This is a Galaxy wrapper for the RSeQC RNA-Seq QC package. |
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4 |
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5 ** Installation ** |
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6 |
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7 Installation from a tool shed provides the necessary tool dependencies, R, numpy, and RSeQC. |
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8 |
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9 Otherwise, make sure that R and the RSeQC scripts are in the path and run under the Galaxy environment. |
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10 Move the xml files to a subdirectory of your tools directory and add lines in tool_conf.xml to point to them. |
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11 Restart the Galaxy server. |
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12 |
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13 Requires Python 2.7 |
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14 |
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15 ** Attribution ** |
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16 |
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17 The RSeQC package and associated documentation can be found at: http://rseqc.sourceforge.net/ |
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18 |
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19 The galaxy wrapper code was written by |
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20 Nilesh Kavthekar, School of Engineering and Applied Sciences, University of Pennsylvania, Class of 2016 |
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21 Modified by |
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22 Lance Parsons, Lewis-Sigler Institute for Integrative Genomics, Princeton University, |
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23 Bjorn Gruning, University of Freiburg, bjoern.gruening@gmail.com |
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24 The development of the wrapper code is housed on BitBucket at: https://bitbucket.org/lance_parsons/rseqc_galaxy_wrapper |