Mercurial > repos > nilesh > rseqc
comparison test-data/bamstats.txt @ 49:6b33e31bda10 draft
Uploaded tar based on https://github.com/lparsons/galaxy_tools/tree/master/tools/rseqc 1a3c419bc0ded7c40cb2bc3e7c87bfb01ddfeba2
| author | lparsons |
|---|---|
| date | Thu, 16 Jul 2015 17:43:43 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| 48:2e6190c29c54 | 49:6b33e31bda10 |
|---|---|
| 1 Load BAM file ... Done | |
| 2 | |
| 3 #================================================== | |
| 4 #All numbers are READ count | |
| 5 #================================================== | |
| 6 | |
| 7 Total records: 40 | |
| 8 | |
| 9 QC failed: 0 | |
| 10 Optical/PCR duplicate: 0 | |
| 11 Non primary hits 0 | |
| 12 Unmapped reads: 0 | |
| 13 mapq < mapq_cut (non-unique): 0 | |
| 14 | |
| 15 mapq >= mapq_cut (unique): 40 | |
| 16 Read-1: 20 | |
| 17 Read-2: 20 | |
| 18 Reads map to '+': 20 | |
| 19 Reads map to '-': 20 | |
| 20 Non-splice reads: 36 | |
| 21 Splice reads: 4 | |
| 22 Reads mapped in proper pairs: 39 | |
| 23 Proper-paired reads map to different chrom:0 |