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view test-data/bamstats.txt @ 49:6b33e31bda10 draft

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Uploaded tar based on https://github.com/lparsons/galaxy_tools/tree/master/tools/rseqc 1a3c419bc0ded7c40cb2bc3e7c87bfb01ddfeba2
author lparsons
date Thu, 16 Jul 2015 17:43:43 -0400
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Load BAM file ...  Done

#==================================================
#All numbers are READ count
#==================================================

Total records:                          40

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        0
Unmapped reads:                         0
mapq < mapq_cut (non-unique):           0

mapq >= mapq_cut (unique):              40
Read-1:                                 20
Read-2:                                 20
Reads map to '+':                       20
Reads map to '-':                       20
Non-splice reads:                       36
Splice reads:                           4
Reads mapped in proper pairs:           39
Proper-paired reads map to different chrom:0