annotate ChoosePatterns.xml @ 14:eb8e01ed3516 draft

Uploaded
author ning
date Fri, 15 Mar 2013 18:23:46 -0400
parents
children 4b906754aef7
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
14
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
1 <tool id="Choose_Patterns" name="Choose Patterns of interests in a Multiple Condition Design">
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
2 <description>Choose patterns of interests in a multiple condition design</description>
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
3 <command>R --quiet --slave --file=$GALAXY_ROOT_DIR/tools/EBSeq/ChoosePatterns.R --args $All_Possible_Patterns $Rows_of_interests $output</command>
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
4 <inputs>
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
5 <param name="All_Possible_Patterns" type="data" label="All Possible Patterns" help=""/>
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
6 <param name="Rows_of_interests" type="text" size="60" value="1,2,3" label="Enter the rows
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
7 of interests (seperated by comma, no space please)" />
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
8 </inputs>
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
9 <outputs>
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
10 <data format="tabular" name="output" />
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
11 </outputs>
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
12
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
13 <help>
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
14 Input could be obtained from Get All Possible Patterns Function
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
15
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
16 </help>
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
17
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
18
eb8e01ed3516 Uploaded
ning
parents:
diff changeset
19 </tool>