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changeset 23:675d21e7fabc draft

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Uploaded
author ning
date Wed, 20 Mar 2013 00:08:20 -0400
parents b2462f571961
children b6465cb90cc0
files EBGeneMultiCondTest.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/EBGeneMultiCondTest.xml	Wed Mar 20 00:08:06 2013 -0400
+++ b/EBGeneMultiCondTest.xml	Wed Mar 20 00:08:20 2013 -0400
@@ -2,14 +2,14 @@
   <description>Runs EBSeq to find DE genes across multiple (more than two) conditions</description>
   <command>R --quiet --slave --file=$GALAXY_ROOT_DIR/tools/EBSeq/EBGeneMultiCondTest.R --args $Gene_Expression $First_Row_Sample_Names $Conditions $Patterns $PP_of_each_pattern $Pattern_with_highest_PP $Sizes</command>
   <inputs>
-		<param name="Gene_Expression" type="data" format="tabular" label="Gene Expression (tab eliminated)"/>
+		<param name="Gene_Expression" type="data" format="tabular" label="Gene Expression (tab delimited, please use the unnormalized values, e.g. expected counts form RSEM)"/>
 		<param name="First_Row_Sample_Names" type="select" format="text">
 			<label>The First Row is Sample Names?</label>
 			<option value="y">Yes</option>
 			<option value="n">No</option>
 			</param>
 		<param name="Conditions" type="text" size="60" value="C1,C2" label="Enter which condition each
-			sample belongs to (seperated by comma, no space please)." 
+			sample belongs to (separated by comma, no space please)." 
 			help=""/>
 		<param name="Patterns" type="data" format="tabular" label="Patterns of Interests"/>
   </inputs>