Mercurial > repos > nml > combine_assemblystats
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planemo upload for repository https://github.com/phac-nml/galaxy_tools commit 132092ff7fe1c4810d1221054419389180b81657
author | nml |
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date | Wed, 08 Nov 2017 16:38:50 -0500 |
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Statistics for contig lengths: Min contig length: 1,134 Max contig length: 101,601 Mean contig length: 24967.61 Standard deviation of contig length: 23081.09 Median contig length: 16,588 N50 contig length: 44,563 Statistics for numbers of contigs: Number of contigs: 185 Number of contigs >=1kb: 185 Number of contigs in N50: 37 Statistics for bases in the contigs: Number of bases in all contigs: 4,619,008 Number of bases in contigs >=1kb: 4,619,008 GC Content of contigs: 47.50 % Simple Dinucleotide repeats: Number of contigs with over 70% dinucleotode repeats: 0.00 % (0 contigs) AT: 0.00 % (0 contigs) CG: 0.00 % (0 contigs) AC: 0.00 % (0 contigs) TG: 0.00 % (0 contigs) AG: 0.00 % (0 contigs) TC: 0.00 % (0 contigs) Simple mononucleotide repeats: Number of contigs with over 50% mononucleotode repeats: 0.00 % (0 contigs) AA: 0.00 % (0 contigs) TT: 0.00 % (0 contigs) CC: 0.00 % (0 contigs) GG: 0.00 % (0 contigs)