Mercurial > repos > nml > fasta2bed
annotate test-data/contigs.fasta @ 0:1b3c339fd390 draft default tip
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
author | nml |
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date | Wed, 11 Oct 2017 11:46:25 -0400 |
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0
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
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changeset
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1 >lcl|AF319579.1_cds_AAN14420.1_1 [gene=dnaA] [protein=DnaA] [protein_id=AAN14420.1] [location=1090..2430] [gbkey=CDS] |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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2 TTGGAAAATATCTCTGATTTATGGAATAGTGCCTTAAAAGAATTAGAAAAAAAGGTAAGCAAGCCAAGTT |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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3 ATGAAACCTGGTTAAAATCAACAACTGCTCATAACTTAAAAAAAGATGTATTAACTATTACAGCTCCAAA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
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changeset
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4 TGAATTCGCTCGTGACTGGCTAGAATCTCATTATTCGGAACTAATCTCCGAAACACTTTATGATTTAACA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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5 GGGGCAAAACTAGCTATTCGTTTTATCATTCCCCAAAGTCAGGCAGAAGAGGATATAGATCTCCCTTCTG |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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6 TTAAGCAAAAACACGCACATGATGAGTCTAATCACTTACCACAGAGTATGTTAAACCCAAAATATACATT |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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7 TGATACATTTGTTATTGGCTCTGGTAATCGTTTTGCACATGCTGCTTCTTTAGCTGTAGCTGAAGCACCA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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8 GCTAAAGCCTATAATCCGCTCTTTATTTACGGGGGCGTTGGACTTGGAAAAACACATTTAATGCACGCAA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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9 TTGGGCATTATGTAATTGAACACAACCCAAATGCAAAAGTTGTATATTTATCATCTGAAAAATTTACAAA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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10 TGAATTTATTAATTCAATTCGTGATAATAAAGCTGTCGATTTTCGTAATAAATATCGTAATGTAGATGTC |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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11 TTATTGATAGATGATATTCAATTTCTTGCTGGAAAAGAACAAACACAGGAAGAGTTTTTCCATACATTTA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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12 ATGCGTTACATGAAGAAAGTAAACAAATTGTGATTTCAAGCGATAGACCACCAAAAGAAATCCCAACTTT |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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13 AGAAGATCGCCTTCGTTCTCGCTTTGAATGGGGGTTAATTACGGACATTACGCCACCAGATTTAGAAACC |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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14 AGAATCGCAATTTTACGTAAAAAAGCAAAAGCAGAAGGTCTTGATATACCAAATGAAGTTATGCTTTATA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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15 TCGCAAATCAAATCGATTCAAATATTCGTGAACTAGAGGGTGCACTTATTCGAGTTGTAGCTTATTCATC |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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16 TTTAATTAATAAAGATATGAATGCTGATTTAGCGGCTGAAGCGCTTAAAAATATTATTCCAAACTCTATA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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17 CCTAGAATTATTTCTATTTCTGATATTCAAAAGGCTGTTGGGGGCGTCTATCAAGTAAAATTAGAAGATT |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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18 TCAAAGCAAAAAAACGGACAAAATCCGTTGCATTCCCTCGCCAAATTGCGATGTATTTATCACGTGAACT |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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19 TACGGACTCATCTTTGCCAAAAATAGGTGAAGAATTTGGTGGCCGCGATCATACAACAGTAATCCATGCT |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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20 CACGAAAAAATTTCGAAGCTATTAAAAACGGATACTCAATTACAAAAACACGTTGAAGAAGTTAAGGATA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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21 TTTTAAAATAG |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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22 >lcl|AF319579.1_cds_AAN14421.1_2 [gene=dnaN] [protein=DNA polymerase III beta chain] [protein_id=AAN14421.1] [location=2613..3758] [gbkey=CDS] |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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23 ATGCGTTTTACAATACAAAAAGACTATCTTGTAAGAAGTGTACAAGATGTAATGAAGGCAGTTTCTTCTC |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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24 GTACAACAATTCCAATTCTTACAGGGATTAAAGTTGTAGCAACTGAAGAAGGAGTTACTTTAACAGGTAG |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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25 TGATGCAGACATCTCTATCGAATCATTTATCCCAGTCGAAGATGCTGGAAAAGAAATTGTGGAAATTGAA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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26 CAAACAGGAAGTATTATTTTACAAGCAAAATATTTTAGTGAGATCGTAAAAAAATTACCTAAAGAAACTG |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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27 TCGAAATTTCTGTAGAAAATCATTTTATGACAAAAATAAAATCTGGAAAATCAGAGTTCAACTTAAATGG |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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28 TTTAGATGCTGCTGAATATCCGTTATTACCACAAATCGAAGAACATCATGTATTTAAGATTCCAACAGAT |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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29 TTACTAAAGCACATGATTCGTCAAACAGTATTTGCAGTTTCAAGTTCTGAAACAAGACCGATCTTGACAG |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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30 GTGTAAACTGGAAGGTATATAACAGCGAGCTAACTTGTATTGCAACAGATAGTCACAGACTAGCACTTCG |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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31 TAAAGCAAAAATCGAAGGGTATAATATTGCCGATGAATTTCAAGCGAATGTCGTTATTCCTGGTAAGAGC |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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32 TTAAGTGAATTAAGTAAAATTCTAGATGAATCTGAAGAAATGGTAGATATCGTTATTACGGAGTATCAAG |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
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33 TATTATTCCGTACAAAACATTTATTATTCTTCTCAAGATTATTAGAAGGAAATTATCCAGATACAACGCG |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
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34 TTTAATTCCAGCTGAAAGTAAAACTGATATATTTGTAAATACAAAAGAATTTTTACAAGCGATTGATCGT |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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35 GCGTCGCTGTTAGCAAGAGATGGTCGTAACAACGTTGTTAAATTATCGACATTAGAACAACAGATGTTAG |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
diff
changeset
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36 AGATTTCTTCGAATGCACCAGAAATCGGAAAAGTAGTAGAAGAGGTTCAATGTGAAAATGTAGATGGAGA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
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37 AGAATTAAAAATATCTTTTAGTGCAAAATATATGATGGACGCATTAAAGGCTTTAGACAGTACAGAAATT |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
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38 AAAGTTAGTTTTACTGGAGCGATGAGACCGTTTTTAATTCGCACAGTAAATGATAATTCCATTATCCAAT |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
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39 TAATTTTACCAGTCCGTACTTACTAA |
1b3c339fd390
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit a0204b99a722240fe9b03b78a0786b30aa8ecc96
nml
parents:
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40 |