Mercurial > repos > nml > sistr_cmd

annotate test-data/sistr-results-13-1101.tabular @ 4:17fcac7ddf54 draft

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"planemo upload commit 5d0cc76371b061089f1399d21aea86540cbcab4f"
author nml
date Thu, 06 Aug 2020 11:48:49 -0400
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17fcac7ddf54 "planemo upload commit 5d0cc76371b061089f1399d21aea86540cbcab4f"
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1 cgmlst_ST cgmlst_distance cgmlst_found_loci cgmlst_genome_match cgmlst_matching_alleles cgmlst_subspecies fasta_filepath genome h1 h2 mash_distance mash_genome mash_match mash_serovar mash_subspecies o_antigen qc_messages qc_status serogroup serovar serovar_antigen serovar_cgmlst
17fcac7ddf54 "planemo upload commit 5d0cc76371b061089f1399d21aea86540cbcab4f"
nml
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2 3782467861 0.045454545454545414 330 SRR2174054 315 enterica /galaxy/database/files/000/dataset_700.dat 13-1101-Paratyphi_B b 1,2 0.00178577 72308 929 Paratyphi B var. Java enterica 1,4,[5],12 INFO: Number of cgMLST330 loci found (n=330) PASS B Paratyphi B var. Java Paratyphi B|Paratyphi B var. Java|Limete Paratyphi B var. Java