annotate test-data/test1-summary.tsv @ 14:4b9a8031ab74 draft

"planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr commit bb824050809fecf04d8f17cd4419033c18927f45"
author nml
date Fri, 05 Mar 2021 16:04:58 +0000
parents 7573a6c11c4d
children 141afacabcfa
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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7573a6c11c4d "planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr commit 69b939934ff9f503c7314cdbe6e3cb08e5f84db5"
nml
parents: 9
diff changeset
1 Isolate ID Quality Module Genotype Predicted Phenotype Plasmid Scheme Sequence Type Genome Length N50 value Number of Contigs Greater Than Or Equal To 300 bp Quality Module Feedback
7573a6c11c4d "planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr commit 69b939934ff9f503c7314cdbe6e3cb08e5f84db5"
nml
parents: 9
diff changeset
2 16S-rc_gyrA-rc_beta-lactam.fsa Failed 16S_rrsD (C1065T), blaIMP-42, gyrA (A67P) spectinomycin, ampicillin, amoxicillin/clavulanic acid, cefoxitin, ceftriaxone, meropenem, ciprofloxacin I/R, nalidixic acid None - - 5220 5220 1 Genome length is not within the acceptable length range [4000000,6000000] ; N50 value is not greater than the specified minimum value [10000]