Mercurial > repos > nml > staramr

view test-data/test1-detailed-summary.tsv @ 15:be818ae858e4 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr commit e92a931da272a26f3a16e7b1d31c432890a6fdb3
author nml
date Wed, 22 Jun 2022 14:44:55 +0000
parents 61a3e97aa865
children 141afacabcfa
line wrap: on
line source

Isolate ID	Data	Data Type	Predicted Phenotype	%Identity	%Overlap	HSP Length/Total Length	Contig	Start	End	Accession
16S-rc_gyrA-rc_beta-lactam.fsa	ST- (-)	MLST								
16S-rc_gyrA-rc_beta-lactam.fsa	None	Plasmid								
16S-rc_gyrA-rc_beta-lactam.fsa	16S_rrsD (C1065T)	Resistance	spectinomycin	99.94	100.0	1544/1544	16S_rrsD	1604	61	
16S-rc_gyrA-rc_beta-lactam.fsa	blaIMP-42	Resistance	ampicillin, amoxicillin/clavulanic acid, cefoxitin, ceftriaxone, meropenem	99.73	100.0	741/741	16S_rrsD	4381	5121	AB753456
16S-rc_gyrA-rc_beta-lactam.fsa	gyrA (A67P)	Resistance	ciprofloxacin I/R, nalidixic acid	99.96	100.0	2637/2637	16S_rrsD	4317	1681