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comparison ITSx_db/HMMs/M.hmm @ 0:f82c70f54bd7 draft

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author okorol
date Tue, 24 Mar 2015 12:02:48 -0400
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-1:000000000000 0:f82c70f54bd7
1 HMMER3/b [3.0 | March 2010]
2 NAME 3_End_Metazoa_58S_end_eight_long
3 LENG 45
4 ALPH DNA
5 RF no
6 CS no
7 MAP yes
8 DATE Sat Feb 25 14:35:27 2012
9 NSEQ 2
10 EFFN 2.000000
11 CKSUM 2003464747
12 STATS LOCAL MSV -7.3950 0.72793
13 STATS LOCAL VITERBI -8.3145 0.72793
14 STATS LOCAL FORWARD -3.2953 0.72793
15 HMM A C G T
16 m->m m->i m->d i->m i->i d->m d->d
17 COMPO 1.58596 1.45659 1.21394 1.32730
18 1.38629 1.38629 1.38629 1.38629
19 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
20 1 2.57915 2.25909 2.64442 0.28946 1 - -
21 1.38629 1.38629 1.38629 1.38629
22 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23 2 2.81865 0.23582 2.88868 2.35662 2 - -
24 1.38629 1.38629 1.38629 1.38629
25 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26 3 0.23862 2.84929 2.43386 2.70756 3 - -
27 1.38629 1.38629 1.38629 1.38629
28 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29 4 2.53331 3.02441 0.20344 2.88069 4 - -
30 1.38629 1.38629 1.38629 1.38629
31 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32 5 2.53331 3.02441 0.20344 2.88069 5 - -
33 1.38629 1.38629 1.38629 1.38629
34 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35 6 0.23862 2.84929 2.43386 2.70756 6 - -
36 1.38629 1.38629 1.38629 1.38629
37 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
38 7 2.81865 0.23582 2.88868 2.35662 7 - -
39 1.38629 1.38629 1.38629 1.38629
40 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41 8 2.81865 0.23582 2.88868 2.35662 8 - -
42 1.38629 1.38629 1.38629 1.38629
43 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
44 9 0.23862 2.84929 2.43386 2.70756 9 - -
45 1.38629 1.38629 1.38629 1.38629
46 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47 10 0.23862 2.84929 2.43386 2.70756 10 - -
48 1.38629 1.38629 1.38629 1.38629
49 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
50 11 2.57915 2.25909 2.64442 0.28946 11 - -
51 1.38629 1.38629 1.38629 1.38629
52 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53 12 0.23862 2.84929 2.43386 2.70756 12 - -
54 1.38629 1.38629 1.38629 1.38629
55 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
56 13 0.23862 2.84929 2.43386 2.70756 13 - -
57 1.38629 1.38629 1.38629 1.38629
58 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
59 14 2.57915 2.25909 2.64442 0.28946 14 - -
60 1.38629 1.38629 1.38629 1.38629
61 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
62 15 2.57915 2.25909 2.64442 0.28946 15 - -
63 1.38629 1.38629 1.38629 1.38629
64 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
65 16 2.81865 0.23582 2.88868 2.35662 16 - -
66 1.38629 1.38629 1.38629 1.38629
67 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
68 17 2.81865 0.23582 2.88868 2.35662 17 - -
69 1.38629 1.38629 1.38629 1.38629
70 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
71 18 2.57915 2.25909 2.64442 0.28946 18 - -
72 1.38629 1.38629 1.38629 1.38629
73 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
74 19 2.53331 3.02441 0.20344 2.88069 19 - -
75 1.38629 1.38629 1.38629 1.38629
76 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
77 20 2.81865 0.23582 2.88868 2.35662 20 - -
78 1.38629 1.38629 1.38629 1.38629
79 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
80 21 2.57915 2.25909 2.64442 0.28946 21 - -
81 1.38629 1.38629 1.38629 1.38629
82 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
83 22 2.53331 3.02441 0.20344 2.88069 22 - -
84 1.38629 1.38629 1.38629 1.38629
85 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
86 23 2.53331 3.02441 0.20344 2.88069 23 - -
87 1.38629 1.38629 1.38629 1.38629
88 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
89 24 2.81865 0.23582 2.88868 2.35662 24 - -
90 1.38629 1.38629 1.38629 1.38629
91 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
92 25 0.23862 2.84929 2.43386 2.70756 25 - -
93 1.38629 1.38629 1.38629 1.38629
94 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
95 26 2.81865 0.23582 2.88868 2.35662 26 - -
96 1.38629 1.38629 1.38629 1.38629
97 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
98 27 2.53331 3.02441 0.20344 2.88069 27 - -
99 1.38629 1.38629 1.38629 1.38629
100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
101 28 2.57915 2.25909 2.64442 0.28946 28 - -
102 1.38629 1.38629 1.38629 1.38629
103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
104 29 2.81865 0.23582 2.88868 2.35662 29 - -
105 1.38629 1.38629 1.38629 1.38629
106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
107 30 2.57915 2.25909 2.64442 0.28946 30 - -
108 1.38629 1.38629 1.38629 1.38629
109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
110 31 2.53331 3.02441 0.20344 2.88069 31 - -
111 1.38629 1.38629 1.38629 1.38629
112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
113 32 2.53331 3.02441 0.20344 2.88069 32 - -
114 1.38629 1.38629 1.38629 1.38629
115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
116 33 2.57915 2.25909 2.64442 0.28946 33 - -
117 1.38629 1.38629 1.38629 1.38629
118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
119 34 2.57915 2.25909 2.64442 0.28946 34 - -
120 1.38629 1.38629 1.38629 1.38629
121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
122 35 2.53331 3.02441 0.20344 2.88069 35 - -
123 1.38629 1.38629 1.38629 1.38629
124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
125 36 0.23862 2.84929 2.43386 2.70756 36 - -
126 1.38629 1.38629 1.38629 1.38629
127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
128 37 2.53331 3.02441 0.20344 2.88069 37 - -
129 1.38629 1.38629 1.38629 1.38629
130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
131 38 2.53331 3.02441 0.20344 2.88069 38 - -
132 1.38629 1.38629 1.38629 1.38629
133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
134 39 2.53331 3.02441 0.20344 2.88069 39 - -
135 1.38629 1.38629 1.38629 1.38629
136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
137 40 2.57915 2.25909 2.64442 0.28946 40 - -
138 1.38629 1.38629 1.38629 1.38629
139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
140 41 2.81865 0.23582 2.88868 2.35662 41 - -
141 1.38629 1.38629 1.38629 1.38629
142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
143 42 2.53331 3.02441 0.20344 2.88069 42 - -
144 1.38629 1.38629 1.38629 1.38629
145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
146 43 2.53331 3.02441 0.20344 2.88069 43 - -
147 1.38629 1.38629 1.38629 1.38629
148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
149 44 2.57915 2.25909 2.64442 0.28946 44 - -
150 1.38629 1.38629 1.38629 1.38629
151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
152 45 2.57915 2.25909 2.64442 0.28946 45 - -
153 1.38629 1.38629 1.38629 1.38629
154 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
155 //
156 HMMER3/b [3.0 | March 2010]
157 NAME 3_End_Metazoa_58S_end_eighteen_long
158 LENG 45
159 ALPH DNA
160 RF no
161 CS no
162 MAP yes
163 DATE Sat Feb 25 14:41:01 2012
164 NSEQ 7
165 EFFN 3.072754
166 CKSUM 853724038
167 STATS LOCAL MSV -8.0712 0.71932
168 STATS LOCAL VITERBI -7.8377 0.71932
169 STATS LOCAL FORWARD -3.9153 0.71932
170 HMM A C G T
171 m->m m->i m->d i->m i->i d->m d->d
172 COMPO 1.72598 1.06114 1.14871 1.83950
173 1.38629 1.38629 1.38629 1.38629
174 0.03867 3.96514 3.96514 1.46634 0.26236 0.00000 *
175 1 2.88838 3.50239 0.12695 3.39840 1 - -
176 1.38629 1.38629 1.38629 1.38629
177 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
178 2 3.33672 0.14232 3.39016 2.75827 2 - -
179 1.38629 1.38629 1.38629 1.38629
180 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
181 3 3.33672 0.14232 3.39016 2.75827 3 - -
182 1.38629 1.38629 1.38629 1.38629
183 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
184 4 3.33672 0.14232 3.39016 2.75827 4 - -
185 1.38629 1.38629 1.38629 1.38629
186 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
187 5 0.15343 3.29681 2.74736 3.19071 5 - -
188 1.38629 1.38629 1.38629 1.38629
189 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
190 6 0.15343 3.29681 2.74736 3.19071 6 - -
191 1.38629 1.38629 1.38629 1.38629
192 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
193 7 2.88838 3.50239 0.12695 3.39840 7 - -
194 1.38629 1.38629 1.38629 1.38629
195 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
196 8 2.88838 3.50239 0.12695 3.39840 8 - -
197 1.38629 1.38629 1.38629 1.38629
198 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
199 9 0.15343 3.29681 2.74736 3.19071 9 - -
200 1.38629 1.38629 1.38629 1.38629
201 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
202 10 3.00514 2.54188 3.05644 0.19274 10 - -
203 1.38629 1.38629 1.38629 1.38629
204 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
205 11 3.33672 0.14232 3.39016 2.75827 11 - -
206 1.38629 1.38629 1.38629 1.38629
207 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
208 12 3.33672 0.14232 3.39016 2.75827 12 - -
209 1.38629 1.38629 1.38629 1.38629
210 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
211 13 3.33672 0.14232 3.39016 2.75827 13 - -
212 1.38629 1.38629 1.38629 1.38629
213 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
214 14 0.15343 3.29681 2.74736 3.19071 14 - -
215 1.38629 1.38629 1.38629 1.38629
216 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
217 15 3.00514 2.54188 3.05644 0.19274 15 - -
218 1.38629 1.38629 1.38629 1.38629
219 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
220 16 3.00514 2.54188 3.05644 0.19274 16 - -
221 1.38629 1.38629 1.38629 1.38629
222 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
223 17 3.33672 0.14232 3.39016 2.75827 17 - -
224 1.38629 1.38629 1.38629 1.38629
225 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
226 18 3.33672 0.14232 3.39016 2.75827 18 - -
227 1.38629 1.38629 1.38629 1.38629
228 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
229 19 3.33672 0.14232 3.39016 2.75827 19 - -
230 1.38629 1.38629 1.38629 1.38629
231 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
232 20 2.88838 3.50239 0.12695 3.39840 20 - -
233 1.38629 1.38629 1.38629 1.38629
234 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
235 21 2.88838 3.50239 0.12695 3.39840 21 - -
236 1.38629 1.38629 1.38629 1.38629
237 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
238 22 2.88838 3.50239 0.12695 3.39840 22 - -
239 1.38629 1.38629 1.38629 1.38629
240 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
241 23 3.33672 0.14232 3.39016 2.75827 23 - -
242 1.38629 1.38629 1.38629 1.38629
243 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
244 24 3.33672 0.14232 3.39016 2.75827 24 - -
245 1.38629 1.38629 1.38629 1.38629
246 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
247 25 0.15343 3.29681 2.74736 3.19071 25 - -
248 1.38629 1.38629 1.38629 1.38629
249 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
250 26 3.33672 0.14232 3.39016 2.75827 26 - -
251 1.38629 1.38629 1.38629 1.38629
252 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
253 27 2.88838 3.50239 0.12695 3.39840 27 - -
254 1.38629 1.38629 1.38629 1.38629
255 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
256 28 3.33672 0.14232 3.39016 2.75827 28 - -
257 1.38629 1.38629 1.38629 1.38629
258 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
259 29 3.33672 0.14232 3.39016 2.75827 29 - -
260 1.38629 1.38629 1.38629 1.38629
261 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
262 30 3.00514 2.54188 3.05644 0.19274 30 - -
263 1.38629 1.38629 1.38629 1.38629
264 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
265 31 2.88838 3.50239 0.12695 3.39840 31 - -
266 1.38629 1.38629 1.38629 1.38629
267 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
268 32 2.88838 3.50239 0.12695 3.39840 32 - -
269 1.38629 1.38629 1.38629 1.38629
270 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
271 33 3.33672 0.14232 3.39016 2.75827 33 - -
272 1.38629 1.38629 1.38629 1.38629
273 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
274 34 3.00514 2.54188 3.05644 0.19274 34 - -
275 1.38629 1.38629 1.38629 1.38629
276 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
277 35 2.88838 3.50239 0.12695 3.39840 35 - -
278 1.38629 1.38629 1.38629 1.38629
279 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
280 36 0.15343 3.29681 2.74736 3.19071 36 - -
281 1.38629 1.38629 1.38629 1.38629
282 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
283 37 2.88838 3.50239 0.12695 3.39840 37 - -
284 1.38629 1.38629 1.38629 1.38629
285 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
286 38 2.88838 3.50239 0.12695 3.39840 38 - -
287 1.38629 1.38629 1.38629 1.38629
288 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
289 39 2.88838 3.50239 0.12695 3.39840 39 - -
290 1.38629 1.38629 1.38629 1.38629
291 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
292 40 3.33672 0.14232 3.39016 2.75827 40 - -
293 1.38629 1.38629 1.38629 1.38629
294 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
295 41 0.15343 3.29681 2.74736 3.19071 41 - -
296 1.38629 1.38629 1.38629 1.38629
297 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
298 42 2.88838 3.50239 0.12695 3.39840 42 - -
299 1.38629 1.38629 1.38629 1.38629
300 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
301 43 2.88838 3.50239 0.12695 3.39840 43 - -
302 1.38629 1.38629 1.38629 1.38629
303 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
304 44 3.33672 0.14232 3.39016 2.75827 44 - -
305 1.38629 1.38629 1.38629 1.38629
306 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547
307 45 3.00514 2.54188 3.05644 0.19274 45 - -
308 1.38629 1.38629 1.38629 1.38629
309 0.01952 3.94599 * 1.46634 0.26236 0.00000 *
310 //
311 HMMER3/b [3.0 | March 2010]
312 NAME 3_End_Metazoa_58S_end_elevena_long
313 LENG 45
314 ALPH DNA
315 RF no
316 CS no
317 MAP yes
318 DATE Sat Feb 25 14:36:50 2012
319 NSEQ 2
320 EFFN 2.000000
321 CKSUM 1769201338
322 STATS LOCAL MSV -7.4098 0.72868
323 STATS LOCAL VITERBI -8.2930 0.72868
324 STATS LOCAL FORWARD -3.7636 0.72868
325 HMM A C G T
326 m->m m->i m->d i->m i->i d->m d->d
327 COMPO 1.65755 1.56600 1.31765 1.10036
328 1.38629 1.38629 1.38629 1.38629
329 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
330 1 2.81865 0.23582 2.88868 2.35662 1 - -
331 1.38629 1.38629 1.38629 1.38629
332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
333 2 2.53331 3.02441 0.20344 2.88069 2 - -
334 1.38629 1.38629 1.38629 1.38629
335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
336 3 2.57915 2.25909 2.64442 0.28946 3 - -
337 1.38629 1.38629 1.38629 1.38629
338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
339 4 2.57915 2.25909 2.64442 0.28946 4 - -
340 1.38629 1.38629 1.38629 1.38629
341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
342 5 2.53331 3.02441 0.20344 2.88069 5 - -
343 1.38629 1.38629 1.38629 1.38629
344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
345 6 2.57915 2.25909 2.64442 0.28946 6 - -
346 1.38629 1.38629 1.38629 1.38629
347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
348 7 2.57915 2.25909 2.64442 0.28946 7 - -
349 1.38629 1.38629 1.38629 1.38629
350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
351 8 2.53331 3.02441 0.20344 2.88069 8 - -
352 1.38629 1.38629 1.38629 1.38629
353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
354 9 2.53331 3.02441 0.20344 2.88069 9 - -
355 1.38629 1.38629 1.38629 1.38629
356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
357 10 2.53331 3.02441 0.20344 2.88069 10 - -
358 1.38629 1.38629 1.38629 1.38629
359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
360 11 2.57915 2.25909 2.64442 0.28946 11 - -
361 1.38629 1.38629 1.38629 1.38629
362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
363 12 2.57915 2.25909 2.64442 0.28946 12 - -
364 1.38629 1.38629 1.38629 1.38629
365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
366 13 2.57915 2.25909 2.64442 0.28946 13 - -
367 1.38629 1.38629 1.38629 1.38629
368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
369 14 2.57915 2.25909 2.64442 0.28946 14 - -
370 1.38629 1.38629 1.38629 1.38629
371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
372 15 2.53331 3.02441 0.20344 2.88069 15 - -
373 1.38629 1.38629 1.38629 1.38629
374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
375 16 2.81865 0.23582 2.88868 2.35662 16 - -
376 1.38629 1.38629 1.38629 1.38629
377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
378 17 2.81865 0.23582 2.88868 2.35662 17 - -
379 1.38629 1.38629 1.38629 1.38629
380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
381 18 2.81865 0.23582 2.88868 2.35662 18 - -
382 1.38629 1.38629 1.38629 1.38629
383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
384 19 2.57915 2.25909 2.64442 0.28946 19 - -
385 1.38629 1.38629 1.38629 1.38629
386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
387 20 2.57915 2.25909 2.64442 0.28946 20 - -
388 1.38629 1.38629 1.38629 1.38629
389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
390 21 2.81865 0.23582 2.88868 2.35662 21 - -
391 1.38629 1.38629 1.38629 1.38629
392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
393 22 0.23862 2.84929 2.43386 2.70756 22 - -
394 1.38629 1.38629 1.38629 1.38629
395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
396 23 0.23862 2.84929 2.43386 2.70756 23 - -
397 1.38629 1.38629 1.38629 1.38629
398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
399 24 2.81865 0.23582 2.88868 2.35662 24 - -
400 1.38629 1.38629 1.38629 1.38629
401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
402 25 0.23862 2.84929 2.43386 2.70756 25 - -
403 1.38629 1.38629 1.38629 1.38629
404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
405 26 2.57915 2.25909 2.64442 0.28946 26 - -
406 1.38629 1.38629 1.38629 1.38629
407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
408 27 0.23862 2.84929 2.43386 2.70756 27 - -
409 1.38629 1.38629 1.38629 1.38629
410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
411 28 0.23862 2.84929 2.43386 2.70756 28 - -
412 1.38629 1.38629 1.38629 1.38629
413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
414 29 2.53331 3.02441 0.20344 2.88069 29 - -
415 1.38629 1.38629 1.38629 1.38629
416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
417 30 2.81865 0.23582 2.88868 2.35662 30 - -
418 1.38629 1.38629 1.38629 1.38629
419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
420 31 2.53331 3.02441 0.20344 2.88069 31 - -
421 1.38629 1.38629 1.38629 1.38629
422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
423 32 0.23862 2.84929 2.43386 2.70756 32 - -
424 1.38629 1.38629 1.38629 1.38629
425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
426 33 2.57915 2.25909 2.64442 0.28946 33 - -
427 1.38629 1.38629 1.38629 1.38629
428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
429 34 2.57915 2.25909 2.64442 0.28946 34 - -
430 1.38629 1.38629 1.38629 1.38629
431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
432 35 2.81865 0.23582 2.88868 2.35662 35 - -
433 1.38629 1.38629 1.38629 1.38629
434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
435 36 0.23862 2.84929 2.43386 2.70756 36 - -
436 1.38629 1.38629 1.38629 1.38629
437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
438 37 2.53331 3.02441 0.20344 2.88069 37 - -
439 1.38629 1.38629 1.38629 1.38629
440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
441 38 2.53331 3.02441 0.20344 2.88069 38 - -
442 1.38629 1.38629 1.38629 1.38629
443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
444 39 2.53331 3.02441 0.20344 2.88069 39 - -
445 1.38629 1.38629 1.38629 1.38629
446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
447 40 2.57915 2.25909 2.64442 0.28946 40 - -
448 1.38629 1.38629 1.38629 1.38629
449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
450 41 2.53331 3.02441 0.20344 2.88069 41 - -
451 1.38629 1.38629 1.38629 1.38629
452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
453 42 2.57915 2.25909 2.64442 0.28946 42 - -
454 1.38629 1.38629 1.38629 1.38629
455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
456 43 2.57915 2.25909 2.64442 0.28946 43 - -
457 1.38629 1.38629 1.38629 1.38629
458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
459 44 2.57915 2.25909 2.64442 0.28946 44 - -
460 1.38629 1.38629 1.38629 1.38629
461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
462 45 2.57915 2.25909 2.64442 0.28946 45 - -
463 1.38629 1.38629 1.38629 1.38629
464 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
465 //
466 HMMER3/b [3.0 | March 2010]
467 NAME 3_End_Metazoa_58S_end_elevenba_long
468 LENG 45
469 ALPH DNA
470 RF no
471 CS no
472 MAP yes
473 DATE Sat Feb 25 14:36:58 2012
474 NSEQ 12
475 EFFN 3.653320
476 CKSUM 2545005974
477 STATS LOCAL MSV -7.2478 0.71933
478 STATS LOCAL VITERBI -7.5667 0.71933
479 STATS LOCAL FORWARD -4.4610 0.71933
480 HMM A C G T
481 m->m m->i m->d i->m i->i d->m d->d
482 COMPO 1.90548 1.55415 1.18492 1.09628
483 1.38629 1.38629 1.38629 1.38629
484 0.03477 4.06959 4.06959 1.46634 0.26236 0.00000 *
485 1 3.54821 0.11728 3.59264 2.91206 1 - -
486 1.38629 1.38629 1.38629 1.38629
487 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
488 2 3.01623 3.68846 0.10671 3.60381 2 - -
489 1.38629 1.38629 1.38629 1.38629
490 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
491 3 3.54821 0.11728 3.59264 2.91206 3 - -
492 1.38629 1.38629 1.38629 1.38629
493 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
494 4 3.54821 0.11728 3.59264 2.91206 4 - -
495 1.38629 1.38629 1.38629 1.38629
496 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
497 5 3.01623 3.68846 0.10671 3.60381 5 - -
498 1.38629 1.38629 1.38629 1.38629
499 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
500 6 3.19097 2.66011 3.23517 0.16302 6 - -
501 1.38629 1.38629 1.38629 1.38629
502 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
503 7 3.19097 2.66011 3.23517 0.16302 7 - -
504 1.38629 1.38629 1.38629 1.38629
505 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
506 8 3.01623 3.68846 0.10671 3.60381 8 - -
507 1.38629 1.38629 1.38629 1.38629
508 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
509 9 3.01623 3.68846 0.10671 3.60381 9 - -
510 1.38629 1.38629 1.38629 1.38629
511 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
512 10 3.01623 3.68846 0.10671 3.60381 10 - -
513 1.38629 1.38629 1.38629 1.38629
514 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
515 11 2.46397 0.95038 2.53528 0.80058 11 - -
516 1.38629 1.38629 1.38629 1.38629
517 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
518 12 3.19097 2.66011 3.23517 0.16302 12 - -
519 1.38629 1.38629 1.38629 1.38629
520 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
521 13 1.31721 2.20518 2.29020 0.65269 13 - -
522 1.38629 1.38629 1.38629 1.38629
523 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
524 14 3.19097 2.66011 3.23517 0.16302 14 - -
525 1.38629 1.38629 1.38629 1.38629
526 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
527 15 3.01623 3.68846 0.10671 3.60381 15 - -
528 1.38629 1.38629 1.38629 1.38629
529 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
530 16 3.54821 0.11728 3.59264 2.91206 16 - -
531 1.38629 1.38629 1.38629 1.38629
532 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
533 17 3.19097 2.66011 3.23517 0.16302 17 - -
534 1.38629 1.38629 1.38629 1.38629
535 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
536 18 3.54821 0.11728 3.59264 2.91206 18 - -
537 1.38629 1.38629 1.38629 1.38629
538 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
539 19 3.19097 2.66011 3.23517 0.16302 19 - -
540 1.38629 1.38629 1.38629 1.38629
541 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
542 20 3.19097 2.66011 3.23517 0.16302 20 - -
543 1.38629 1.38629 1.38629 1.38629
544 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
545 21 3.54821 0.11728 3.59264 2.91206 21 - -
546 1.38629 1.38629 1.38629 1.38629
547 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
548 22 3.01623 3.68846 0.10671 3.60381 22 - -
549 1.38629 1.38629 1.38629 1.38629
550 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
551 23 3.01623 3.68846 0.10671 3.60381 23 - -
552 1.38629 1.38629 1.38629 1.38629
553 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
554 24 3.54821 0.11728 3.59264 2.91206 24 - -
555 1.38629 1.38629 1.38629 1.38629
556 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
557 25 0.12934 3.48051 2.86668 3.39183 25 - -
558 1.38629 1.38629 1.38629 1.38629
559 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
560 26 3.19097 2.66011 3.23517 0.16302 26 - -
561 1.38629 1.38629 1.38629 1.38629
562 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
563 27 0.12934 3.48051 2.86668 3.39183 27 - -
564 1.38629 1.38629 1.38629 1.38629
565 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
566 28 3.19097 2.66011 3.23517 0.16302 28 - -
567 1.38629 1.38629 1.38629 1.38629
568 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
569 29 3.01623 3.68846 0.10671 3.60381 29 - -
570 1.38629 1.38629 1.38629 1.38629
571 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
572 30 2.80925 1.82879 2.86859 0.32523 30 - -
573 1.38629 1.38629 1.38629 1.38629
574 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
575 31 3.01623 3.68846 0.10671 3.60381 31 - -
576 1.38629 1.38629 1.38629 1.38629
577 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
578 32 0.12934 3.48051 2.86668 3.39183 32 - -
579 1.38629 1.38629 1.38629 1.38629
580 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
581 33 3.19097 2.66011 3.23517 0.16302 33 - -
582 1.38629 1.38629 1.38629 1.38629
583 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
584 34 3.19097 2.66011 3.23517 0.16302 34 - -
585 1.38629 1.38629 1.38629 1.38629
586 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
587 35 3.54821 0.11728 3.59264 2.91206 35 - -
588 1.38629 1.38629 1.38629 1.38629
589 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
590 36 0.12934 3.48051 2.86668 3.39183 36 - -
591 1.38629 1.38629 1.38629 1.38629
592 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
593 37 3.01623 3.68846 0.10671 3.60381 37 - -
594 1.38629 1.38629 1.38629 1.38629
595 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
596 38 3.01623 3.68846 0.10671 3.60381 38 - -
597 1.38629 1.38629 1.38629 1.38629
598 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
599 39 3.01623 3.68846 0.10671 3.60381 39 - -
600 1.38629 1.38629 1.38629 1.38629
601 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
602 40 3.19097 2.66011 3.23517 0.16302 40 - -
603 1.38629 1.38629 1.38629 1.38629
604 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
605 41 0.12934 3.48051 2.86668 3.39183 41 - -
606 1.38629 1.38629 1.38629 1.38629
607 0.14651 4.06959 2.12696 1.46634 0.26236 1.09861 0.40547
608 42 2.99921 2.53808 3.05074 0.19379 42 - -
609 1.38629 1.38629 1.38629 1.38629
610 0.03880 3.96188 3.96188 1.46634 0.26236 0.25204 1.50153
611 43 3.01623 3.68846 0.10671 3.60381 43 - -
612 1.38629 1.38629 1.38629 1.38629
613 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
614 44 3.19097 2.66011 3.23517 0.16302 44 - -
615 1.38629 1.38629 1.38629 1.38629
616 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547
617 45 3.19097 2.66011 3.23517 0.16302 45 - -
618 1.38629 1.38629 1.38629 1.38629
619 0.01753 4.05236 * 1.46634 0.26236 0.00000 *
620 //
621 HMMER3/b [3.0 | March 2010]
622 NAME 3_End_Metazoa_58S_end_elevenbb_long
623 LENG 45
624 ALPH DNA
625 RF no
626 CS no
627 MAP yes
628 DATE Sat Feb 25 14:37:05 2012
629 NSEQ 2
630 EFFN 2.000000
631 CKSUM 2492946338
632 STATS LOCAL MSV -7.2784 0.72847
633 STATS LOCAL VITERBI -8.0968 0.72847
634 STATS LOCAL FORWARD -3.6372 0.72847
635 HMM A C G T
636 m->m m->i m->d i->m i->i d->m d->d
637 COMPO 1.73680 1.50236 1.26569 1.14173
638 1.38629 1.38629 1.38629 1.38629
639 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
640 1 2.81865 0.23582 2.88868 2.35662 1 - -
641 1.38629 1.38629 1.38629 1.38629
642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
643 2 2.53331 3.02441 0.20344 2.88069 2 - -
644 1.38629 1.38629 1.38629 1.38629
645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
646 3 2.57915 2.25909 2.64442 0.28946 3 - -
647 1.38629 1.38629 1.38629 1.38629
648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
649 4 2.81865 0.23582 2.88868 2.35662 4 - -
650 1.38629 1.38629 1.38629 1.38629
651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
652 5 2.53331 3.02441 0.20344 2.88069 5 - -
653 1.38629 1.38629 1.38629 1.38629
654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
655 6 2.57915 2.25909 2.64442 0.28946 6 - -
656 1.38629 1.38629 1.38629 1.38629
657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
658 7 2.57915 2.25909 2.64442 0.28946 7 - -
659 1.38629 1.38629 1.38629 1.38629
660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
661 8 2.53331 3.02441 0.20344 2.88069 8 - -
662 1.38629 1.38629 1.38629 1.38629
663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
664 9 2.53331 3.02441 0.20344 2.88069 9 - -
665 1.38629 1.38629 1.38629 1.38629
666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
667 10 2.53331 3.02441 0.20344 2.88069 10 - -
668 1.38629 1.38629 1.38629 1.38629
669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
670 11 2.81865 0.23582 2.88868 2.35662 11 - -
671 1.38629 1.38629 1.38629 1.38629
672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
673 12 2.57915 2.25909 2.64442 0.28946 12 - -
674 1.38629 1.38629 1.38629 1.38629
675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
676 13 2.57915 2.25909 2.64442 0.28946 13 - -
677 1.38629 1.38629 1.38629 1.38629
678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
679 14 2.57915 2.25909 2.64442 0.28946 14 - -
680 1.38629 1.38629 1.38629 1.38629
681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
682 15 2.53331 3.02441 0.20344 2.88069 15 - -
683 1.38629 1.38629 1.38629 1.38629
684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
685 16 2.81865 0.23582 2.88868 2.35662 16 - -
686 1.38629 1.38629 1.38629 1.38629
687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
688 17 2.57915 2.25909 2.64442 0.28946 17 - -
689 1.38629 1.38629 1.38629 1.38629
690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
691 18 2.81865 0.23582 2.88868 2.35662 18 - -
692 1.38629 1.38629 1.38629 1.38629
693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
694 19 2.57915 2.25909 2.64442 0.28946 19 - -
695 1.38629 1.38629 1.38629 1.38629
696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
697 20 2.57915 2.25909 2.64442 0.28946 20 - -
698 1.38629 1.38629 1.38629 1.38629
699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
700 21 2.81865 0.23582 2.88868 2.35662 21 - -
701 1.38629 1.38629 1.38629 1.38629
702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
703 22 2.53331 3.02441 0.20344 2.88069 22 - -
704 1.38629 1.38629 1.38629 1.38629
705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
706 23 0.23862 2.84929 2.43386 2.70756 23 - -
707 1.38629 1.38629 1.38629 1.38629
708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
709 24 2.81865 0.23582 2.88868 2.35662 24 - -
710 1.38629 1.38629 1.38629 1.38629
711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
712 25 0.23862 2.84929 2.43386 2.70756 25 - -
713 1.38629 1.38629 1.38629 1.38629
714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
715 26 2.57915 2.25909 2.64442 0.28946 26 - -
716 1.38629 1.38629 1.38629 1.38629
717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
718 27 0.23862 2.84929 2.43386 2.70756 27 - -
719 1.38629 1.38629 1.38629 1.38629
720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
721 28 2.81865 0.23582 2.88868 2.35662 28 - -
722 1.38629 1.38629 1.38629 1.38629
723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
724 29 2.53331 3.02441 0.20344 2.88069 29 - -
725 1.38629 1.38629 1.38629 1.38629
726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
727 30 2.57915 2.25909 2.64442 0.28946 30 - -
728 1.38629 1.38629 1.38629 1.38629
729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
730 31 2.53331 3.02441 0.20344 2.88069 31 - -
731 1.38629 1.38629 1.38629 1.38629
732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
733 32 0.23862 2.84929 2.43386 2.70756 32 - -
734 1.38629 1.38629 1.38629 1.38629
735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
736 33 2.57915 2.25909 2.64442 0.28946 33 - -
737 1.38629 1.38629 1.38629 1.38629
738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
739 34 2.57915 2.25909 2.64442 0.28946 34 - -
740 1.38629 1.38629 1.38629 1.38629
741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
742 35 2.81865 0.23582 2.88868 2.35662 35 - -
743 1.38629 1.38629 1.38629 1.38629
744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
745 36 0.23862 2.84929 2.43386 2.70756 36 - -
746 1.38629 1.38629 1.38629 1.38629
747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
748 37 2.53331 3.02441 0.20344 2.88069 37 - -
749 1.38629 1.38629 1.38629 1.38629
750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
751 38 2.53331 3.02441 0.20344 2.88069 38 - -
752 1.38629 1.38629 1.38629 1.38629
753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
754 39 2.53331 3.02441 0.20344 2.88069 39 - -
755 1.38629 1.38629 1.38629 1.38629
756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
757 40 2.57915 2.25909 2.64442 0.28946 40 - -
758 1.38629 1.38629 1.38629 1.38629
759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
760 41 0.23862 2.84929 2.43386 2.70756 41 - -
761 1.38629 1.38629 1.38629 1.38629
762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
763 42 2.57915 2.25909 2.64442 0.28946 42 - -
764 1.38629 1.38629 1.38629 1.38629
765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
766 43 2.53331 3.02441 0.20344 2.88069 43 - -
767 1.38629 1.38629 1.38629 1.38629
768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
769 44 2.57915 2.25909 2.64442 0.28946 44 - -
770 1.38629 1.38629 1.38629 1.38629
771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
772 45 2.57915 2.25909 2.64442 0.28946 45 - -
773 1.38629 1.38629 1.38629 1.38629
774 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
775 //
776 HMMER3/b [3.0 | March 2010]
777 NAME 3_End_Metazoa_58S_end_elevenbc_long
778 LENG 45
779 ALPH DNA
780 RF no
781 CS no
782 MAP yes
783 DATE Sat Feb 25 14:37:12 2012
784 NSEQ 2
785 EFFN 2.000000
786 CKSUM 1326273846
787 STATS LOCAL MSV -7.2371 0.72835
788 STATS LOCAL VITERBI -8.2153 0.72835
789 STATS LOCAL FORWARD -3.6602 0.72835
790 HMM A C G T
791 m->m m->i m->d i->m i->i d->m d->d
792 COMPO 1.73864 1.44249 1.26678 1.18363
793 1.38629 1.38629 1.38629 1.38629
794 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
795 1 2.81865 0.23582 2.88868 2.35662 1 - -
796 1.38629 1.38629 1.38629 1.38629
797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
798 2 2.53331 3.02441 0.20344 2.88069 2 - -
799 1.38629 1.38629 1.38629 1.38629
800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
801 3 2.57915 2.25909 2.64442 0.28946 3 - -
802 1.38629 1.38629 1.38629 1.38629
803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
804 4 2.81865 0.23582 2.88868 2.35662 4 - -
805 1.38629 1.38629 1.38629 1.38629
806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
807 5 2.53331 3.02441 0.20344 2.88069 5 - -
808 1.38629 1.38629 1.38629 1.38629
809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
810 6 2.57915 2.25909 2.64442 0.28946 6 - -
811 1.38629 1.38629 1.38629 1.38629
812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
813 7 2.57915 2.25909 2.64442 0.28946 7 - -
814 1.38629 1.38629 1.38629 1.38629
815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
816 8 2.53331 3.02441 0.20344 2.88069 8 - -
817 1.38629 1.38629 1.38629 1.38629
818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
819 9 2.53331 3.02441 0.20344 2.88069 9 - -
820 1.38629 1.38629 1.38629 1.38629
821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
822 10 2.53331 3.02441 0.20344 2.88069 10 - -
823 1.38629 1.38629 1.38629 1.38629
824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
825 11 2.57915 2.25909 2.64442 0.28946 11 - -
826 1.38629 1.38629 1.38629 1.38629
827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
828 12 2.57915 2.25909 2.64442 0.28946 12 - -
829 1.38629 1.38629 1.38629 1.38629
830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
831 13 2.81865 0.23582 2.88868 2.35662 13 - -
832 1.38629 1.38629 1.38629 1.38629
833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
834 14 2.57915 2.25909 2.64442 0.28946 14 - -
835 1.38629 1.38629 1.38629 1.38629
836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
837 15 2.53331 3.02441 0.20344 2.88069 15 - -
838 1.38629 1.38629 1.38629 1.38629
839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
840 16 2.81865 0.23582 2.88868 2.35662 16 - -
841 1.38629 1.38629 1.38629 1.38629
842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
843 17 2.81865 0.23582 2.88868 2.35662 17 - -
844 1.38629 1.38629 1.38629 1.38629
845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
846 18 2.81865 0.23582 2.88868 2.35662 18 - -
847 1.38629 1.38629 1.38629 1.38629
848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
849 19 2.57915 2.25909 2.64442 0.28946 19 - -
850 1.38629 1.38629 1.38629 1.38629
851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
852 20 2.57915 2.25909 2.64442 0.28946 20 - -
853 1.38629 1.38629 1.38629 1.38629
854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
855 21 2.81865 0.23582 2.88868 2.35662 21 - -
856 1.38629 1.38629 1.38629 1.38629
857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
858 22 2.53331 3.02441 0.20344 2.88069 22 - -
859 1.38629 1.38629 1.38629 1.38629
860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
861 23 0.23862 2.84929 2.43386 2.70756 23 - -
862 1.38629 1.38629 1.38629 1.38629
863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
864 24 2.81865 0.23582 2.88868 2.35662 24 - -
865 1.38629 1.38629 1.38629 1.38629
866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
867 25 0.23862 2.84929 2.43386 2.70756 25 - -
868 1.38629 1.38629 1.38629 1.38629
869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
870 26 2.57915 2.25909 2.64442 0.28946 26 - -
871 1.38629 1.38629 1.38629 1.38629
872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
873 27 0.23862 2.84929 2.43386 2.70756 27 - -
874 1.38629 1.38629 1.38629 1.38629
875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
876 28 2.57915 2.25909 2.64442 0.28946 28 - -
877 1.38629 1.38629 1.38629 1.38629
878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
879 29 2.53331 3.02441 0.20344 2.88069 29 - -
880 1.38629 1.38629 1.38629 1.38629
881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
882 30 2.81865 0.23582 2.88868 2.35662 30 - -
883 1.38629 1.38629 1.38629 1.38629
884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
885 31 2.53331 3.02441 0.20344 2.88069 31 - -
886 1.38629 1.38629 1.38629 1.38629
887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
888 32 0.23862 2.84929 2.43386 2.70756 32 - -
889 1.38629 1.38629 1.38629 1.38629
890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
891 33 2.57915 2.25909 2.64442 0.28946 33 - -
892 1.38629 1.38629 1.38629 1.38629
893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
894 34 2.57915 2.25909 2.64442 0.28946 34 - -
895 1.38629 1.38629 1.38629 1.38629
896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
897 35 2.81865 0.23582 2.88868 2.35662 35 - -
898 1.38629 1.38629 1.38629 1.38629
899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
900 36 0.23862 2.84929 2.43386 2.70756 36 - -
901 1.38629 1.38629 1.38629 1.38629
902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
903 37 2.53331 3.02441 0.20344 2.88069 37 - -
904 1.38629 1.38629 1.38629 1.38629
905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
906 38 2.53331 3.02441 0.20344 2.88069 38 - -
907 1.38629 1.38629 1.38629 1.38629
908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
909 39 2.53331 3.02441 0.20344 2.88069 39 - -
910 1.38629 1.38629 1.38629 1.38629
911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
912 40 2.57915 2.25909 2.64442 0.28946 40 - -
913 1.38629 1.38629 1.38629 1.38629
914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
915 41 0.23862 2.84929 2.43386 2.70756 41 - -
916 1.38629 1.38629 1.38629 1.38629
917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
918 42 2.57915 2.25909 2.64442 0.28946 42 - -
919 1.38629 1.38629 1.38629 1.38629
920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
921 43 2.53331 3.02441 0.20344 2.88069 43 - -
922 1.38629 1.38629 1.38629 1.38629
923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
924 44 2.57915 2.25909 2.64442 0.28946 44 - -
925 1.38629 1.38629 1.38629 1.38629
926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
927 45 2.57915 2.25909 2.64442 0.28946 45 - -
928 1.38629 1.38629 1.38629 1.38629
929 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
930 //
931 HMMER3/b [3.0 | March 2010]
932 NAME 3_End_Metazoa_58S_end_elevenbd_long
933 LENG 45
934 ALPH DNA
935 RF no
936 CS no
937 MAP yes
938 DATE Sat Feb 25 14:37:20 2012
939 NSEQ 2
940 EFFN 2.000000
941 CKSUM 3676096652
942 STATS LOCAL MSV -7.2130 0.72850
943 STATS LOCAL VITERBI -8.4369 0.72850
944 STATS LOCAL FORWARD -3.6712 0.72850
945 HMM A C G T
946 m->m m->i m->d i->m i->i d->m d->d
947 COMPO 1.81889 1.56574 1.21422 1.10287
948 1.38629 1.38629 1.38629 1.38629
949 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
950 1 2.81865 0.23582 2.88868 2.35662 1 - -
951 1.38629 1.38629 1.38629 1.38629
952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
953 2 2.53331 3.02441 0.20344 2.88069 2 - -
954 1.38629 1.38629 1.38629 1.38629
955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
956 3 2.81865 0.23582 2.88868 2.35662 3 - -
957 1.38629 1.38629 1.38629 1.38629
958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
959 4 2.81865 0.23582 2.88868 2.35662 4 - -
960 1.38629 1.38629 1.38629 1.38629
961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
962 5 2.53331 3.02441 0.20344 2.88069 5 - -
963 1.38629 1.38629 1.38629 1.38629
964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
965 6 2.57915 2.25909 2.64442 0.28946 6 - -
966 1.38629 1.38629 1.38629 1.38629
967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
968 7 2.57915 2.25909 2.64442 0.28946 7 - -
969 1.38629 1.38629 1.38629 1.38629
970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
971 8 2.53331 3.02441 0.20344 2.88069 8 - -
972 1.38629 1.38629 1.38629 1.38629
973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
974 9 2.53331 3.02441 0.20344 2.88069 9 - -
975 1.38629 1.38629 1.38629 1.38629
976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
977 10 2.53331 3.02441 0.20344 2.88069 10 - -
978 1.38629 1.38629 1.38629 1.38629
979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
980 11 2.57915 2.25909 2.64442 0.28946 11 - -
981 1.38629 1.38629 1.38629 1.38629
982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
983 12 2.57915 2.25909 2.64442 0.28946 12 - -
984 1.38629 1.38629 1.38629 1.38629
985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
986 13 2.57915 2.25909 2.64442 0.28946 13 - -
987 1.38629 1.38629 1.38629 1.38629
988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
989 14 2.57915 2.25909 2.64442 0.28946 14 - -
990 1.38629 1.38629 1.38629 1.38629
991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
992 15 2.53331 3.02441 0.20344 2.88069 15 - -
993 1.38629 1.38629 1.38629 1.38629
994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
995 16 2.81865 0.23582 2.88868 2.35662 16 - -
996 1.38629 1.38629 1.38629 1.38629
997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
998 17 2.57915 2.25909 2.64442 0.28946 17 - -
999 1.38629 1.38629 1.38629 1.38629
1000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1001 18 2.81865 0.23582 2.88868 2.35662 18 - -
1002 1.38629 1.38629 1.38629 1.38629
1003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1004 19 2.57915 2.25909 2.64442 0.28946 19 - -
1005 1.38629 1.38629 1.38629 1.38629
1006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1007 20 2.57915 2.25909 2.64442 0.28946 20 - -
1008 1.38629 1.38629 1.38629 1.38629
1009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1010 21 2.53331 3.02441 0.20344 2.88069 21 - -
1011 1.38629 1.38629 1.38629 1.38629
1012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1013 22 0.23862 2.84929 2.43386 2.70756 22 - -
1014 1.38629 1.38629 1.38629 1.38629
1015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1016 23 2.53331 3.02441 0.20344 2.88069 23 - -
1017 1.38629 1.38629 1.38629 1.38629
1018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1019 24 2.81865 0.23582 2.88868 2.35662 24 - -
1020 1.38629 1.38629 1.38629 1.38629
1021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1022 25 0.23862 2.84929 2.43386 2.70756 25 - -
1023 1.38629 1.38629 1.38629 1.38629
1024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1025 26 2.57915 2.25909 2.64442 0.28946 26 - -
1026 1.38629 1.38629 1.38629 1.38629
1027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1028 27 0.23862 2.84929 2.43386 2.70756 27 - -
1029 1.38629 1.38629 1.38629 1.38629
1030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1031 28 2.57915 2.25909 2.64442 0.28946 28 - -
1032 1.38629 1.38629 1.38629 1.38629
1033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1034 29 2.57915 2.25909 2.64442 0.28946 29 - -
1035 1.38629 1.38629 1.38629 1.38629
1036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1037 30 2.81865 0.23582 2.88868 2.35662 30 - -
1038 1.38629 1.38629 1.38629 1.38629
1039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1040 31 2.53331 3.02441 0.20344 2.88069 31 - -
1041 1.38629 1.38629 1.38629 1.38629
1042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1043 32 0.23862 2.84929 2.43386 2.70756 32 - -
1044 1.38629 1.38629 1.38629 1.38629
1045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1046 33 2.57915 2.25909 2.64442 0.28946 33 - -
1047 1.38629 1.38629 1.38629 1.38629
1048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1049 34 2.57915 2.25909 2.64442 0.28946 34 - -
1050 1.38629 1.38629 1.38629 1.38629
1051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1052 35 2.81865 0.23582 2.88868 2.35662 35 - -
1053 1.38629 1.38629 1.38629 1.38629
1054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1055 36 0.23862 2.84929 2.43386 2.70756 36 - -
1056 1.38629 1.38629 1.38629 1.38629
1057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1058 37 2.53331 3.02441 0.20344 2.88069 37 - -
1059 1.38629 1.38629 1.38629 1.38629
1060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1061 38 2.53331 3.02441 0.20344 2.88069 38 - -
1062 1.38629 1.38629 1.38629 1.38629
1063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1064 39 2.53331 3.02441 0.20344 2.88069 39 - -
1065 1.38629 1.38629 1.38629 1.38629
1066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1067 40 2.57915 2.25909 2.64442 0.28946 40 - -
1068 1.38629 1.38629 1.38629 1.38629
1069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1070 41 2.53331 3.02441 0.20344 2.88069 41 - -
1071 1.38629 1.38629 1.38629 1.38629
1072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1073 42 2.57915 2.25909 2.64442 0.28946 42 - -
1074 1.38629 1.38629 1.38629 1.38629
1075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1076 43 2.53331 3.02441 0.20344 2.88069 43 - -
1077 1.38629 1.38629 1.38629 1.38629
1078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1079 44 2.57915 2.25909 2.64442 0.28946 44 - -
1080 1.38629 1.38629 1.38629 1.38629
1081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1082 45 2.57915 2.25909 2.64442 0.28946 45 - -
1083 1.38629 1.38629 1.38629 1.38629
1084 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1085 //
1086 HMMER3/b [3.0 | March 2010]
1087 NAME 3_End_Metazoa_58S_end_elevenbe_long
1088 LENG 45
1089 ALPH DNA
1090 RF no
1091 CS no
1092 MAP yes
1093 DATE Sat Feb 25 14:37:26 2012
1094 NSEQ 9
1095 EFFN 3.405762
1096 CKSUM 2444157436
1097 STATS LOCAL MSV -7.2647 0.71933
1098 STATS LOCAL VITERBI -7.8111 0.71933
1099 STATS LOCAL FORWARD -4.3285 0.71933
1100 HMM A C G T
1101 m->m m->i m->d i->m i->i d->m d->d
1102 COMPO 1.93599 1.45945 1.25584 1.08318
1103 1.38629 1.38629 1.38629 1.38629
1104 0.03633 4.02638 4.02638 1.46634 0.26236 0.00000 *
1105 1 3.46331 0.12666 3.51148 2.85093 1 - -
1106 1.38629 1.38629 1.38629 1.38629
1107 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1108 2 2.96574 3.61431 0.11430 3.52175 2 - -
1109 1.38629 1.38629 1.38629 1.38629
1110 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1111 3 3.46331 0.12666 3.51148 2.85093 3 - -
1112 1.38629 1.38629 1.38629 1.38629
1113 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1114 4 3.11517 2.61202 3.16230 0.17445 4 - -
1115 1.38629 1.38629 1.38629 1.38629
1116 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1117 5 3.46331 0.12666 3.51148 2.85093 5 - -
1118 1.38629 1.38629 1.38629 1.38629
1119 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1120 6 3.11517 2.61202 3.16230 0.17445 6 - -
1121 1.38629 1.38629 1.38629 1.38629
1122 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1123 7 3.11517 2.61202 3.16230 0.17445 7 - -
1124 1.38629 1.38629 1.38629 1.38629
1125 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1126 8 2.96574 3.61431 0.11430 3.52175 8 - -
1127 1.38629 1.38629 1.38629 1.38629
1128 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1129 9 2.96574 3.61431 0.11430 3.52175 9 - -
1130 1.38629 1.38629 1.38629 1.38629
1131 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1132 10 2.96574 3.61431 0.11430 3.52175 10 - -
1133 1.38629 1.38629 1.38629 1.38629
1134 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1135 11 3.46331 0.12666 3.51148 2.85093 11 - -
1136 1.38629 1.38629 1.38629 1.38629
1137 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1138 12 3.11517 2.61202 3.16230 0.17445 12 - -
1139 1.38629 1.38629 1.38629 1.38629
1140 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1141 13 3.11517 2.61202 3.16230 0.17445 13 - -
1142 1.38629 1.38629 1.38629 1.38629
1143 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1144 14 3.11517 2.61202 3.16230 0.17445 14 - -
1145 1.38629 1.38629 1.38629 1.38629
1146 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1147 15 2.96574 3.61431 0.11430 3.52175 15 - -
1148 1.38629 1.38629 1.38629 1.38629
1149 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1150 16 3.46331 0.12666 3.51148 2.85093 16 - -
1151 1.38629 1.38629 1.38629 1.38629
1152 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1153 17 3.11517 2.61202 3.16230 0.17445 17 - -
1154 1.38629 1.38629 1.38629 1.38629
1155 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1156 18 3.46331 0.12666 3.51148 2.85093 18 - -
1157 1.38629 1.38629 1.38629 1.38629
1158 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1159 19 3.11517 2.61202 3.16230 0.17445 19 - -
1160 1.38629 1.38629 1.38629 1.38629
1161 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1162 20 3.11517 2.61202 3.16230 0.17445 20 - -
1163 1.38629 1.38629 1.38629 1.38629
1164 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1165 21 2.96574 3.61431 0.11430 3.52175 21 - -
1166 1.38629 1.38629 1.38629 1.38629
1167 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1168 22 0.13848 3.40650 2.81894 3.31066 22 - -
1169 1.38629 1.38629 1.38629 1.38629
1170 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1171 23 2.96574 3.61431 0.11430 3.52175 23 - -
1172 1.38629 1.38629 1.38629 1.38629
1173 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1174 24 3.46331 0.12666 3.51148 2.85093 24 - -
1175 1.38629 1.38629 1.38629 1.38629
1176 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1177 25 0.13848 3.40650 2.81894 3.31066 25 - -
1178 1.38629 1.38629 1.38629 1.38629
1179 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1180 26 3.11517 2.61202 3.16230 0.17445 26 - -
1181 1.38629 1.38629 1.38629 1.38629
1182 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1183 27 0.13848 3.40650 2.81894 3.31066 27 - -
1184 1.38629 1.38629 1.38629 1.38629
1185 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1186 28 3.11517 2.61202 3.16230 0.17445 28 - -
1187 1.38629 1.38629 1.38629 1.38629
1188 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1189 29 2.71342 0.39696 2.78195 1.61237 29 - -
1190 1.38629 1.38629 1.38629 1.38629
1191 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1192 30 3.46331 0.12666 3.51148 2.85093 30 - -
1193 1.38629 1.38629 1.38629 1.38629
1194 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1195 31 2.96574 3.61431 0.11430 3.52175 31 - -
1196 1.38629 1.38629 1.38629 1.38629
1197 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1198 32 0.13848 3.40650 2.81894 3.31066 32 - -
1199 1.38629 1.38629 1.38629 1.38629
1200 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1201 33 3.11517 2.61202 3.16230 0.17445 33 - -
1202 1.38629 1.38629 1.38629 1.38629
1203 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1204 34 3.11517 2.61202 3.16230 0.17445 34 - -
1205 1.38629 1.38629 1.38629 1.38629
1206 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1207 35 3.46331 0.12666 3.51148 2.85093 35 - -
1208 1.38629 1.38629 1.38629 1.38629
1209 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1210 36 0.13848 3.40650 2.81894 3.31066 36 - -
1211 1.38629 1.38629 1.38629 1.38629
1212 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1213 37 2.96574 3.61431 0.11430 3.52175 37 - -
1214 1.38629 1.38629 1.38629 1.38629
1215 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1216 38 2.96574 3.61431 0.11430 3.52175 38 - -
1217 1.38629 1.38629 1.38629 1.38629
1218 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1219 39 2.96574 3.61431 0.11430 3.52175 39 - -
1220 1.38629 1.38629 1.38629 1.38629
1221 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1222 40 3.11517 2.61202 3.16230 0.17445 40 - -
1223 1.38629 1.38629 1.38629 1.38629
1224 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1225 41 2.96574 3.61431 0.11430 3.52175 41 - -
1226 1.38629 1.38629 1.38629 1.38629
1227 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1228 42 3.11517 2.61202 3.16230 0.17445 42 - -
1229 1.38629 1.38629 1.38629 1.38629
1230 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1231 43 2.96574 3.61431 0.11430 3.52175 43 - -
1232 1.38629 1.38629 1.38629 1.38629
1233 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1234 44 3.11517 2.61202 3.16230 0.17445 44 - -
1235 1.38629 1.38629 1.38629 1.38629
1236 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
1237 45 3.11517 2.61202 3.16230 0.17445 45 - -
1238 1.38629 1.38629 1.38629 1.38629
1239 0.01833 4.00838 * 1.46634 0.26236 0.00000 *
1240 //
1241 HMMER3/b [3.0 | March 2010]
1242 NAME 3_End_Metazoa_58S_end_elevenbf_long
1243 LENG 45
1244 ALPH DNA
1245 RF no
1246 CS no
1247 MAP yes
1248 DATE Sat Feb 25 14:37:32 2012
1249 NSEQ 2
1250 EFFN 2.000000
1251 CKSUM 4109347638
1252 STATS LOCAL MSV -7.5168 0.72888
1253 STATS LOCAL VITERBI -8.4209 0.72888
1254 STATS LOCAL FORWARD -3.5664 0.72888
1255 HMM A C G T
1256 m->m m->i m->d i->m i->i d->m d->d
1257 COMPO 1.73750 1.49258 1.37811 1.05788
1258 1.38629 1.38629 1.38629 1.38629
1259 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1260 1 2.81865 0.23582 2.88868 2.35662 1 - -
1261 1.38629 1.38629 1.38629 1.38629
1262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1263 2 2.53331 3.02441 0.20344 2.88069 2 - -
1264 1.38629 1.38629 1.38629 1.38629
1265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1266 3 2.57915 2.25909 2.64442 0.28946 3 - -
1267 1.38629 1.38629 1.38629 1.38629
1268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1269 4 2.57915 2.25909 2.64442 0.28946 4 - -
1270 1.38629 1.38629 1.38629 1.38629
1271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1272 5 2.81865 0.23582 2.88868 2.35662 5 - -
1273 1.38629 1.38629 1.38629 1.38629
1274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1275 6 2.57915 2.25909 2.64442 0.28946 6 - -
1276 1.38629 1.38629 1.38629 1.38629
1277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1278 7 2.57915 2.25909 2.64442 0.28946 7 - -
1279 1.38629 1.38629 1.38629 1.38629
1280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1281 8 2.53331 3.02441 0.20344 2.88069 8 - -
1282 1.38629 1.38629 1.38629 1.38629
1283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1284 9 0.23862 2.84929 2.43386 2.70756 9 - -
1285 1.38629 1.38629 1.38629 1.38629
1286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1287 10 2.53331 3.02441 0.20344 2.88069 10 - -
1288 1.38629 1.38629 1.38629 1.38629
1289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1290 11 2.81865 0.23582 2.88868 2.35662 11 - -
1291 1.38629 1.38629 1.38629 1.38629
1292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1293 12 2.57915 2.25909 2.64442 0.28946 12 - -
1294 1.38629 1.38629 1.38629 1.38629
1295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1296 13 2.57915 2.25909 2.64442 0.28946 13 - -
1297 1.38629 1.38629 1.38629 1.38629
1298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1299 14 2.57915 2.25909 2.64442 0.28946 14 - -
1300 1.38629 1.38629 1.38629 1.38629
1301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1302 15 2.53331 3.02441 0.20344 2.88069 15 - -
1303 1.38629 1.38629 1.38629 1.38629
1304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1305 16 2.81865 0.23582 2.88868 2.35662 16 - -
1306 1.38629 1.38629 1.38629 1.38629
1307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1308 17 2.57915 2.25909 2.64442 0.28946 17 - -
1309 1.38629 1.38629 1.38629 1.38629
1310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1311 18 2.81865 0.23582 2.88868 2.35662 18 - -
1312 1.38629 1.38629 1.38629 1.38629
1313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1314 19 2.57915 2.25909 2.64442 0.28946 19 - -
1315 1.38629 1.38629 1.38629 1.38629
1316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1317 20 2.57915 2.25909 2.64442 0.28946 20 - -
1318 1.38629 1.38629 1.38629 1.38629
1319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1320 21 2.53331 3.02441 0.20344 2.88069 21 - -
1321 1.38629 1.38629 1.38629 1.38629
1322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1323 22 0.23862 2.84929 2.43386 2.70756 22 - -
1324 1.38629 1.38629 1.38629 1.38629
1325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1326 23 0.23862 2.84929 2.43386 2.70756 23 - -
1327 1.38629 1.38629 1.38629 1.38629
1328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1329 24 2.81865 0.23582 2.88868 2.35662 24 - -
1330 1.38629 1.38629 1.38629 1.38629
1331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1332 25 2.57915 2.25909 2.64442 0.28946 25 - -
1333 1.38629 1.38629 1.38629 1.38629
1334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1335 26 2.57915 2.25909 2.64442 0.28946 26 - -
1336 1.38629 1.38629 1.38629 1.38629
1337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1338 27 0.23862 2.84929 2.43386 2.70756 27 - -
1339 1.38629 1.38629 1.38629 1.38629
1340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1341 28 2.57915 2.25909 2.64442 0.28946 28 - -
1342 1.38629 1.38629 1.38629 1.38629
1343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1344 29 2.81865 0.23582 2.88868 2.35662 29 - -
1345 1.38629 1.38629 1.38629 1.38629
1346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1347 30 2.81865 0.23582 2.88868 2.35662 30 - -
1348 1.38629 1.38629 1.38629 1.38629
1349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1350 31 2.53331 3.02441 0.20344 2.88069 31 - -
1351 1.38629 1.38629 1.38629 1.38629
1352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1353 32 0.23862 2.84929 2.43386 2.70756 32 - -
1354 1.38629 1.38629 1.38629 1.38629
1355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1356 33 2.57915 2.25909 2.64442 0.28946 33 - -
1357 1.38629 1.38629 1.38629 1.38629
1358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1359 34 2.57915 2.25909 2.64442 0.28946 34 - -
1360 1.38629 1.38629 1.38629 1.38629
1361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1362 35 2.81865 0.23582 2.88868 2.35662 35 - -
1363 1.38629 1.38629 1.38629 1.38629
1364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1365 36 0.23862 2.84929 2.43386 2.70756 36 - -
1366 1.38629 1.38629 1.38629 1.38629
1367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1368 37 2.53331 3.02441 0.20344 2.88069 37 - -
1369 1.38629 1.38629 1.38629 1.38629
1370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1371 38 2.53331 3.02441 0.20344 2.88069 38 - -
1372 1.38629 1.38629 1.38629 1.38629
1373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1374 39 2.53331 3.02441 0.20344 2.88069 39 - -
1375 1.38629 1.38629 1.38629 1.38629
1376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1377 40 2.57915 2.25909 2.64442 0.28946 40 - -
1378 1.38629 1.38629 1.38629 1.38629
1379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1380 41 2.53331 3.02441 0.20344 2.88069 41 - -
1381 1.38629 1.38629 1.38629 1.38629
1382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1383 42 2.57915 2.25909 2.64442 0.28946 42 - -
1384 1.38629 1.38629 1.38629 1.38629
1385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1386 43 2.53331 3.02441 0.20344 2.88069 43 - -
1387 1.38629 1.38629 1.38629 1.38629
1388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1389 44 2.57915 2.25909 2.64442 0.28946 44 - -
1390 1.38629 1.38629 1.38629 1.38629
1391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1392 45 2.57915 2.25909 2.64442 0.28946 45 - -
1393 1.38629 1.38629 1.38629 1.38629
1394 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1395 //
1396 HMMER3/b [3.0 | March 2010]
1397 NAME 3_End_Metazoa_58S_end_elevenc_long
1398 LENG 45
1399 ALPH DNA
1400 RF no
1401 CS no
1402 MAP yes
1403 DATE Sat Feb 25 14:37:41 2012
1404 NSEQ 2
1405 EFFN 2.000000
1406 CKSUM 3825414869
1407 STATS LOCAL MSV -7.2301 0.72872
1408 STATS LOCAL VITERBI -8.2274 0.72872
1409 STATS LOCAL FORWARD -3.6065 0.72872
1410 HMM A C G T
1411 m->m m->i m->d i->m i->i d->m d->d
1412 COMPO 1.73305 1.63696 1.26224 1.06228
1413 1.38629 1.38629 1.38629 1.38629
1414 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1415 1 2.53331 3.02441 0.20344 2.88069 1 - -
1416 1.38629 1.38629 1.38629 1.38629
1417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1418 2 2.57915 2.25909 2.64442 0.28946 2 - -
1419 1.38629 1.38629 1.38629 1.38629
1420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1421 3 2.81865 0.23582 2.88868 2.35662 3 - -
1422 1.38629 1.38629 1.38629 1.38629
1423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1424 4 2.53331 3.02441 0.20344 2.88069 4 - -
1425 1.38629 1.38629 1.38629 1.38629
1426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1427 5 2.57915 2.25909 2.64442 0.28946 5 - -
1428 1.38629 1.38629 1.38629 1.38629
1429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1430 6 2.57915 2.25909 2.64442 0.28946 6 - -
1431 1.38629 1.38629 1.38629 1.38629
1432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1433 7 2.53331 3.02441 0.20344 2.88069 7 - -
1434 1.38629 1.38629 1.38629 1.38629
1435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1436 8 2.53331 3.02441 0.20344 2.88069 8 - -
1437 1.38629 1.38629 1.38629 1.38629
1438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1439 9 2.53331 3.02441 0.20344 2.88069 9 - -
1440 1.38629 1.38629 1.38629 1.38629
1441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1442 10 2.81865 0.23582 2.88868 2.35662 10 - -
1443 1.38629 1.38629 1.38629 1.38629
1444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1445 11 2.57915 2.25909 2.64442 0.28946 11 - -
1446 1.38629 1.38629 1.38629 1.38629
1447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1448 12 2.57915 2.25909 2.64442 0.28946 12 - -
1449 1.38629 1.38629 1.38629 1.38629
1450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1451 13 2.57915 2.25909 2.64442 0.28946 13 - -
1452 1.38629 1.38629 1.38629 1.38629
1453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1454 14 2.57915 2.25909 2.64442 0.28946 14 - -
1455 1.38629 1.38629 1.38629 1.38629
1456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1457 15 2.53331 3.02441 0.20344 2.88069 15 - -
1458 1.38629 1.38629 1.38629 1.38629
1459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1460 16 2.81865 0.23582 2.88868 2.35662 16 - -
1461 1.38629 1.38629 1.38629 1.38629
1462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1463 17 2.57915 2.25909 2.64442 0.28946 17 - -
1464 1.38629 1.38629 1.38629 1.38629
1465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1466 18 2.81865 0.23582 2.88868 2.35662 18 - -
1467 1.38629 1.38629 1.38629 1.38629
1468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1469 19 2.57915 2.25909 2.64442 0.28946 19 - -
1470 1.38629 1.38629 1.38629 1.38629
1471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1472 20 2.57915 2.25909 2.64442 0.28946 20 - -
1473 1.38629 1.38629 1.38629 1.38629
1474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1475 21 2.81865 0.23582 2.88868 2.35662 21 - -
1476 1.38629 1.38629 1.38629 1.38629
1477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1478 22 2.53331 3.02441 0.20344 2.88069 22 - -
1479 1.38629 1.38629 1.38629 1.38629
1480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1481 23 0.23862 2.84929 2.43386 2.70756 23 - -
1482 1.38629 1.38629 1.38629 1.38629
1483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1484 24 2.81865 0.23582 2.88868 2.35662 24 - -
1485 1.38629 1.38629 1.38629 1.38629
1486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1487 25 0.23862 2.84929 2.43386 2.70756 25 - -
1488 1.38629 1.38629 1.38629 1.38629
1489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1490 26 2.57915 2.25909 2.64442 0.28946 26 - -
1491 1.38629 1.38629 1.38629 1.38629
1492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1493 27 0.23862 2.84929 2.43386 2.70756 27 - -
1494 1.38629 1.38629 1.38629 1.38629
1495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1496 28 2.57915 2.25909 2.64442 0.28946 28 - -
1497 1.38629 1.38629 1.38629 1.38629
1498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1499 29 2.53331 3.02441 0.20344 2.88069 29 - -
1500 1.38629 1.38629 1.38629 1.38629
1501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1502 30 2.57915 2.25909 2.64442 0.28946 30 - -
1503 1.38629 1.38629 1.38629 1.38629
1504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1505 31 2.53331 3.02441 0.20344 2.88069 31 - -
1506 1.38629 1.38629 1.38629 1.38629
1507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1508 32 0.23862 2.84929 2.43386 2.70756 32 - -
1509 1.38629 1.38629 1.38629 1.38629
1510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1511 33 2.57915 2.25909 2.64442 0.28946 33 - -
1512 1.38629 1.38629 1.38629 1.38629
1513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1514 34 2.57915 2.25909 2.64442 0.28946 34 - -
1515 1.38629 1.38629 1.38629 1.38629
1516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1517 35 2.81865 0.23582 2.88868 2.35662 35 - -
1518 1.38629 1.38629 1.38629 1.38629
1519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1520 36 0.23862 2.84929 2.43386 2.70756 36 - -
1521 1.38629 1.38629 1.38629 1.38629
1522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1523 37 2.53331 3.02441 0.20344 2.88069 37 - -
1524 1.38629 1.38629 1.38629 1.38629
1525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1526 38 2.53331 3.02441 0.20344 2.88069 38 - -
1527 1.38629 1.38629 1.38629 1.38629
1528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1529 39 2.53331 3.02441 0.20344 2.88069 39 - -
1530 1.38629 1.38629 1.38629 1.38629
1531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1532 40 2.57915 2.25909 2.64442 0.28946 40 - -
1533 1.38629 1.38629 1.38629 1.38629
1534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1535 41 0.23862 2.84929 2.43386 2.70756 41 - -
1536 1.38629 1.38629 1.38629 1.38629
1537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1538 42 2.57915 2.25909 2.64442 0.28946 42 - -
1539 1.38629 1.38629 1.38629 1.38629
1540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1541 43 2.53331 3.02441 0.20344 2.88069 43 - -
1542 1.38629 1.38629 1.38629 1.38629
1543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1544 44 2.57915 2.25909 2.64442 0.28946 44 - -
1545 1.38629 1.38629 1.38629 1.38629
1546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1547 45 2.57915 2.25909 2.64442 0.28946 45 - -
1548 1.38629 1.38629 1.38629 1.38629
1549 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1550 //
1551 HMMER3/b [3.0 | March 2010]
1552 NAME 3_End_Metazoa_58S_end_fifteen_long
1553 LENG 45
1554 ALPH DNA
1555 RF no
1556 CS no
1557 MAP yes
1558 DATE Sat Feb 25 14:38:34 2012
1559 NSEQ 16
1560 EFFN 3.605469
1561 CKSUM 3791217549
1562 STATS LOCAL MSV -7.3241 0.71932
1563 STATS LOCAL VITERBI -7.7948 0.71932
1564 STATS LOCAL FORWARD -4.2664 0.71932
1565 HMM A C G T
1566 m->m m->i m->d i->m i->i d->m d->d
1567 COMPO 1.47195 1.82456 1.19451 1.18292
1568 1.38629 1.38629 1.38629 1.38629
1569 0.03506 4.06139 4.06139 1.46634 0.26236 0.00000 *
1570 1 0.13100 3.46667 2.85777 3.37664 1 - -
1571 1.38629 1.38629 1.38629 1.38629
1572 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1573 2 3.17670 2.65106 3.22145 0.16511 2 - -
1574 1.38629 1.38629 1.38629 1.38629
1575 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1576 3 0.13100 3.46667 2.85777 3.37664 3 - -
1577 1.38629 1.38629 1.38629 1.38629
1578 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1579 4 3.17670 2.65106 3.22145 0.16511 4 - -
1580 1.38629 1.38629 1.38629 1.38629
1581 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1582 5 3.17670 2.65106 3.22145 0.16511 5 - -
1583 1.38629 1.38629 1.38629 1.38629
1584 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1585 6 3.53238 0.11897 3.57752 2.90072 6 - -
1586 1.38629 1.38629 1.38629 1.38629
1587 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1588 7 0.13100 3.46667 2.85777 3.37664 7 - -
1589 1.38629 1.38629 1.38629 1.38629
1590 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1591 8 2.85850 0.32833 2.92410 1.77901 8 - -
1592 1.38629 1.38629 1.38629 1.38629
1593 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1594 9 0.13100 3.46667 2.85777 3.37664 9 - -
1595 1.38629 1.38629 1.38629 1.38629
1596 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1597 10 0.47160 2.71742 1.45125 2.58134 10 - -
1598 1.38629 1.38629 1.38629 1.38629
1599 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1600 11 1.43022 2.74775 0.47311 2.60899 11 - -
1601 1.38629 1.38629 1.38629 1.38629
1602 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1603 12 3.00689 3.67468 0.10808 3.58855 12 - -
1604 1.38629 1.38629 1.38629 1.38629
1605 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1606 13 3.17670 2.65106 3.22145 0.16511 13 - -
1607 1.38629 1.38629 1.38629 1.38629
1608 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1609 14 3.53238 0.11897 3.57752 2.90072 14 - -
1610 1.38629 1.38629 1.38629 1.38629
1611 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1612 15 3.17670 2.65106 3.22145 0.16511 15 - -
1613 1.38629 1.38629 1.38629 1.38629
1614 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1615 16 3.00689 3.67468 0.10808 3.58855 16 - -
1616 1.38629 1.38629 1.38629 1.38629
1617 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1618 17 3.17670 2.65106 3.22145 0.16511 17 - -
1619 1.38629 1.38629 1.38629 1.38629
1620 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1621 18 3.00689 3.67468 0.10808 3.58855 18 - -
1622 1.38629 1.38629 1.38629 1.38629
1623 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1624 19 3.17670 2.65106 3.22145 0.16511 19 - -
1625 1.38629 1.38629 1.38629 1.38629
1626 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1627 20 3.00689 3.67468 0.10808 3.58855 20 - -
1628 1.38629 1.38629 1.38629 1.38629
1629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1630 21 3.00689 3.67468 0.10808 3.58855 21 - -
1631 1.38629 1.38629 1.38629 1.38629
1632 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1633 22 3.00689 3.67468 0.10808 3.58855 22 - -
1634 1.38629 1.38629 1.38629 1.38629
1635 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1636 23 3.00689 3.67468 0.10808 3.58855 23 - -
1637 1.38629 1.38629 1.38629 1.38629
1638 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1639 24 3.17670 2.65106 3.22145 0.16511 24 - -
1640 1.38629 1.38629 1.38629 1.38629
1641 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1642 25 0.13100 3.46667 2.85777 3.37664 25 - -
1643 1.38629 1.38629 1.38629 1.38629
1644 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1645 26 3.53238 0.11897 3.57752 2.90072 26 - -
1646 1.38629 1.38629 1.38629 1.38629
1647 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1648 27 0.13100 3.46667 2.85777 3.37664 27 - -
1649 1.38629 1.38629 1.38629 1.38629
1650 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1651 28 3.53238 0.11897 3.57752 2.90072 28 - -
1652 1.38629 1.38629 1.38629 1.38629
1653 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1654 29 0.13100 3.46667 2.85777 3.37664 29 - -
1655 1.38629 1.38629 1.38629 1.38629
1656 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1657 30 3.17670 2.65106 3.22145 0.16511 30 - -
1658 1.38629 1.38629 1.38629 1.38629
1659 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1660 31 3.00689 3.67468 0.10808 3.58855 31 - -
1661 1.38629 1.38629 1.38629 1.38629
1662 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1663 32 3.00689 3.67468 0.10808 3.58855 32 - -
1664 1.38629 1.38629 1.38629 1.38629
1665 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1666 33 3.17670 2.65106 3.22145 0.16511 33 - -
1667 1.38629 1.38629 1.38629 1.38629
1668 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1669 34 3.17670 2.65106 3.22145 0.16511 34 - -
1670 1.38629 1.38629 1.38629 1.38629
1671 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1672 35 3.00689 3.67468 0.10808 3.58855 35 - -
1673 1.38629 1.38629 1.38629 1.38629
1674 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1675 36 0.13100 3.46667 2.85777 3.37664 36 - -
1676 1.38629 1.38629 1.38629 1.38629
1677 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1678 37 3.00689 3.67468 0.10808 3.58855 37 - -
1679 1.38629 1.38629 1.38629 1.38629
1680 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1681 38 3.17670 2.65106 3.22145 0.16511 38 - -
1682 1.38629 1.38629 1.38629 1.38629
1683 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1684 39 3.00689 3.67468 0.10808 3.58855 39 - -
1685 1.38629 1.38629 1.38629 1.38629
1686 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1687 40 3.17670 2.65106 3.22145 0.16511 40 - -
1688 1.38629 1.38629 1.38629 1.38629
1689 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1690 41 3.53238 0.11897 3.57752 2.90072 41 - -
1691 1.38629 1.38629 1.38629 1.38629
1692 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1693 42 3.00689 3.67468 0.10808 3.58855 42 - -
1694 1.38629 1.38629 1.38629 1.38629
1695 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1696 43 3.17670 2.65106 3.22145 0.16511 43 - -
1697 1.38629 1.38629 1.38629 1.38629
1698 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1699 44 3.17670 2.65106 3.22145 0.16511 44 - -
1700 1.38629 1.38629 1.38629 1.38629
1701 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547
1702 45 0.13100 3.46667 2.85777 3.37664 45 - -
1703 1.38629 1.38629 1.38629 1.38629
1704 0.01768 4.04401 * 1.46634 0.26236 0.00000 *
1705 //
1706 HMMER3/b [3.0 | March 2010]
1707 NAME 3_End_Metazoa_58S_end_fifty_long
1708 LENG 45
1709 ALPH DNA
1710 RF no
1711 CS no
1712 MAP yes
1713 DATE Sat Feb 25 14:51:15 2012
1714 NSEQ 2
1715 EFFN 2.000000
1716 CKSUM 1066684627
1717 STATS LOCAL MSV -7.5812 0.72751
1718 STATS LOCAL VITERBI -8.5194 0.72751
1719 STATS LOCAL FORWARD -3.2857 0.72751
1720 HMM A C G T
1721 m->m m->i m->d i->m i->i d->m d->d
1722 COMPO 1.92302 1.24002 1.12282 1.43089
1723 1.38629 1.38629 1.38629 1.38629
1724 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1725 1 2.53331 3.02441 0.20344 2.88069 1 - -
1726 1.38629 1.38629 1.38629 1.38629
1727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1728 2 2.53331 3.02441 0.20344 2.88069 2 - -
1729 1.38629 1.38629 1.38629 1.38629
1730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1731 3 2.81865 0.23582 2.88868 2.35662 3 - -
1732 1.38629 1.38629 1.38629 1.38629
1733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1734 4 2.53331 3.02441 0.20344 2.88069 4 - -
1735 1.38629 1.38629 1.38629 1.38629
1736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1737 5 2.81865 0.23582 2.88868 2.35662 5 - -
1738 1.38629 1.38629 1.38629 1.38629
1739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1740 6 2.57915 2.25909 2.64442 0.28946 6 - -
1741 1.38629 1.38629 1.38629 1.38629
1742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1743 7 2.81865 0.23582 2.88868 2.35662 7 - -
1744 1.38629 1.38629 1.38629 1.38629
1745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1746 8 2.53331 3.02441 0.20344 2.88069 8 - -
1747 1.38629 1.38629 1.38629 1.38629
1748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1749 9 2.81865 0.23582 2.88868 2.35662 9 - -
1750 1.38629 1.38629 1.38629 1.38629
1751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1752 10 2.53331 3.02441 0.20344 2.88069 10 - -
1753 1.38629 1.38629 1.38629 1.38629
1754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1755 11 0.23862 2.84929 2.43386 2.70756 11 - -
1756 1.38629 1.38629 1.38629 1.38629
1757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1758 12 2.81865 0.23582 2.88868 2.35662 12 - -
1759 1.38629 1.38629 1.38629 1.38629
1760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1761 13 2.53331 3.02441 0.20344 2.88069 13 - -
1762 1.38629 1.38629 1.38629 1.38629
1763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1764 14 2.81865 0.23582 2.88868 2.35662 14 - -
1765 1.38629 1.38629 1.38629 1.38629
1766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1767 15 2.57915 2.25909 2.64442 0.28946 15 - -
1768 1.38629 1.38629 1.38629 1.38629
1769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1770 16 2.81865 0.23582 2.88868 2.35662 16 - -
1771 1.38629 1.38629 1.38629 1.38629
1772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1773 17 2.57915 2.25909 2.64442 0.28946 17 - -
1774 1.38629 1.38629 1.38629 1.38629
1775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1776 18 2.81865 0.23582 2.88868 2.35662 18 - -
1777 1.38629 1.38629 1.38629 1.38629
1778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1779 19 2.53331 3.02441 0.20344 2.88069 19 - -
1780 1.38629 1.38629 1.38629 1.38629
1781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1782 20 2.81865 0.23582 2.88868 2.35662 20 - -
1783 1.38629 1.38629 1.38629 1.38629
1784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1785 21 2.53331 3.02441 0.20344 2.88069 21 - -
1786 1.38629 1.38629 1.38629 1.38629
1787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1788 22 0.23862 2.84929 2.43386 2.70756 22 - -
1789 1.38629 1.38629 1.38629 1.38629
1790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1791 23 2.53331 3.02441 0.20344 2.88069 23 - -
1792 1.38629 1.38629 1.38629 1.38629
1793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1794 24 2.81865 0.23582 2.88868 2.35662 24 - -
1795 1.38629 1.38629 1.38629 1.38629
1796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1797 25 0.23862 2.84929 2.43386 2.70756 25 - -
1798 1.38629 1.38629 1.38629 1.38629
1799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1800 26 2.57915 2.25909 2.64442 0.28946 26 - -
1801 1.38629 1.38629 1.38629 1.38629
1802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1803 27 2.53331 3.02441 0.20344 2.88069 27 - -
1804 1.38629 1.38629 1.38629 1.38629
1805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1806 28 2.57915 2.25909 2.64442 0.28946 28 - -
1807 1.38629 1.38629 1.38629 1.38629
1808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1809 29 2.81865 0.23582 2.88868 2.35662 29 - -
1810 1.38629 1.38629 1.38629 1.38629
1811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1812 30 2.57915 2.25909 2.64442 0.28946 30 - -
1813 1.38629 1.38629 1.38629 1.38629
1814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1815 31 2.53331 3.02441 0.20344 2.88069 31 - -
1816 1.38629 1.38629 1.38629 1.38629
1817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1818 32 2.57915 2.25909 2.64442 0.28946 32 - -
1819 1.38629 1.38629 1.38629 1.38629
1820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1821 33 2.81865 0.23582 2.88868 2.35662 33 - -
1822 1.38629 1.38629 1.38629 1.38629
1823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1824 34 2.57915 2.25909 2.64442 0.28946 34 - -
1825 1.38629 1.38629 1.38629 1.38629
1826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1827 35 2.53331 3.02441 0.20344 2.88069 35 - -
1828 1.38629 1.38629 1.38629 1.38629
1829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1830 36 0.23862 2.84929 2.43386 2.70756 36 - -
1831 1.38629 1.38629 1.38629 1.38629
1832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1833 37 2.53331 3.02441 0.20344 2.88069 37 - -
1834 1.38629 1.38629 1.38629 1.38629
1835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1836 38 2.57915 2.25909 2.64442 0.28946 38 - -
1837 1.38629 1.38629 1.38629 1.38629
1838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1839 39 2.53331 3.02441 0.20344 2.88069 39 - -
1840 1.38629 1.38629 1.38629 1.38629
1841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1842 40 2.57915 2.25909 2.64442 0.28946 40 - -
1843 1.38629 1.38629 1.38629 1.38629
1844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1845 41 2.81865 0.23582 2.88868 2.35662 41 - -
1846 1.38629 1.38629 1.38629 1.38629
1847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1848 42 2.53331 3.02441 0.20344 2.88069 42 - -
1849 1.38629 1.38629 1.38629 1.38629
1850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1851 43 2.53331 3.02441 0.20344 2.88069 43 - -
1852 1.38629 1.38629 1.38629 1.38629
1853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1854 44 2.57915 2.25909 2.64442 0.28946 44 - -
1855 1.38629 1.38629 1.38629 1.38629
1856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1857 45 2.81865 0.23582 2.88868 2.35662 45 - -
1858 1.38629 1.38629 1.38629 1.38629
1859 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1860 //
1861 HMMER3/b [3.0 | March 2010]
1862 NAME 3_End_Metazoa_58S_end_five_long
1863 LENG 45
1864 ALPH DNA
1865 RF no
1866 CS no
1867 MAP yes
1868 DATE Sat Feb 25 14:34:26 2012
1869 NSEQ 15
1870 EFFN 3.533936
1871 CKSUM 1571947734
1872 STATS LOCAL MSV -7.1684 0.71932
1873 STATS LOCAL VITERBI -7.7256 0.71932
1874 STATS LOCAL FORWARD -4.1697 0.71932
1875 HMM A C G T
1876 m->m m->i m->d i->m i->i d->m d->d
1877 COMPO 1.65608 1.33859 1.13998 1.48248
1878 1.38629 1.38629 1.38629 1.38629
1879 0.03550 4.04899 4.04899 1.46634 0.26236 0.00000 *
1880 1 2.99255 3.65360 0.11020 3.56520 1 - -
1881 1.38629 1.38629 1.38629 1.38629
1882 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1883 2 3.50820 0.12160 3.55441 2.88335 2 - -
1884 1.38629 1.38629 1.38629 1.38629
1885 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1886 3 3.50820 0.12160 3.55441 2.88335 3 - -
1887 1.38629 1.38629 1.38629 1.38629
1888 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1889 4 2.10974 3.16236 0.23737 3.04268 4 - -
1890 1.38629 1.38629 1.38629 1.38629
1891 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1892 5 3.15503 2.63732 3.20062 0.16833 5 - -
1893 1.38629 1.38629 1.38629 1.38629
1894 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1895 6 0.13357 3.44557 2.84418 3.35349 6 - -
1896 1.38629 1.38629 1.38629 1.38629
1897 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1898 7 2.99255 3.65360 0.11020 3.56520 7 - -
1899 1.38629 1.38629 1.38629 1.38629
1900 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1901 8 2.99255 3.65360 0.11020 3.56520 8 - -
1902 1.38629 1.38629 1.38629 1.38629
1903 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1904 9 0.13357 3.44557 2.84418 3.35349 9 - -
1905 1.38629 1.38629 1.38629 1.38629
1906 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1907 10 2.51458 2.79731 0.31083 2.07712 10 - -
1908 1.38629 1.38629 1.38629 1.38629
1909 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1910 11 3.15503 2.63732 3.20062 0.16833 11 - -
1911 1.38629 1.38629 1.38629 1.38629
1912 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1913 12 3.50820 0.12160 3.55441 2.88335 12 - -
1914 1.38629 1.38629 1.38629 1.38629
1915 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1916 13 3.50820 0.12160 3.55441 2.88335 13 - -
1917 1.38629 1.38629 1.38629 1.38629
1918 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1919 14 3.15503 2.63732 3.20062 0.16833 14 - -
1920 1.38629 1.38629 1.38629 1.38629
1921 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1922 15 0.13357 3.44557 2.84418 3.35349 15 - -
1923 1.38629 1.38629 1.38629 1.38629
1924 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1925 16 2.99970 0.26047 3.06184 2.01961 16 - -
1926 1.38629 1.38629 1.38629 1.38629
1927 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1928 17 3.50820 0.12160 3.55441 2.88335 17 - -
1929 1.38629 1.38629 1.38629 1.38629
1930 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1931 18 3.50820 0.12160 3.55441 2.88335 18 - -
1932 1.38629 1.38629 1.38629 1.38629
1933 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1934 19 3.15503 2.63732 3.20062 0.16833 19 - -
1935 1.38629 1.38629 1.38629 1.38629
1936 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1937 20 0.53351 2.65200 1.33972 2.51297 20 - -
1938 1.38629 1.38629 1.38629 1.38629
1939 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1940 21 2.95831 0.27708 3.02151 1.95635 21 - -
1941 1.38629 1.38629 1.38629 1.38629
1942 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1943 22 2.99255 3.65360 0.11020 3.56520 22 - -
1944 1.38629 1.38629 1.38629 1.38629
1945 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1946 23 2.99255 3.65360 0.11020 3.56520 23 - -
1947 1.38629 1.38629 1.38629 1.38629
1948 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1949 24 3.50820 0.12160 3.55441 2.88335 24 - -
1950 1.38629 1.38629 1.38629 1.38629
1951 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1952 25 0.13357 3.44557 2.84418 3.35349 25 - -
1953 1.38629 1.38629 1.38629 1.38629
1954 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1955 26 3.50820 0.12160 3.55441 2.88335 26 - -
1956 1.38629 1.38629 1.38629 1.38629
1957 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1958 27 0.13357 3.44557 2.84418 3.35349 27 - -
1959 1.38629 1.38629 1.38629 1.38629
1960 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1961 28 3.15503 2.63732 3.20062 0.16833 28 - -
1962 1.38629 1.38629 1.38629 1.38629
1963 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1964 29 3.50820 0.12160 3.55441 2.88335 29 - -
1965 1.38629 1.38629 1.38629 1.38629
1966 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1967 30 3.15503 2.63732 3.20062 0.16833 30 - -
1968 1.38629 1.38629 1.38629 1.38629
1969 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1970 31 2.99255 3.65360 0.11020 3.56520 31 - -
1971 1.38629 1.38629 1.38629 1.38629
1972 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1973 32 2.99255 3.65360 0.11020 3.56520 32 - -
1974 1.38629 1.38629 1.38629 1.38629
1975 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1976 33 3.15503 2.63732 3.20062 0.16833 33 - -
1977 1.38629 1.38629 1.38629 1.38629
1978 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1979 34 3.15503 2.63732 3.20062 0.16833 34 - -
1980 1.38629 1.38629 1.38629 1.38629
1981 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1982 35 2.99255 3.65360 0.11020 3.56520 35 - -
1983 1.38629 1.38629 1.38629 1.38629
1984 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1985 36 0.13357 3.44557 2.84418 3.35349 36 - -
1986 1.38629 1.38629 1.38629 1.38629
1987 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1988 37 2.99255 3.65360 0.11020 3.56520 37 - -
1989 1.38629 1.38629 1.38629 1.38629
1990 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1991 38 2.99255 3.65360 0.11020 3.56520 38 - -
1992 1.38629 1.38629 1.38629 1.38629
1993 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1994 39 2.99255 3.65360 0.11020 3.56520 39 - -
1995 1.38629 1.38629 1.38629 1.38629
1996 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
1997 40 3.15503 2.63732 3.20062 0.16833 40 - -
1998 1.38629 1.38629 1.38629 1.38629
1999 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
2000 41 3.50820 0.12160 3.55441 2.88335 41 - -
2001 1.38629 1.38629 1.38629 1.38629
2002 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
2003 42 2.99255 3.65360 0.11020 3.56520 42 - -
2004 1.38629 1.38629 1.38629 1.38629
2005 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
2006 43 3.15503 2.63732 3.20062 0.16833 43 - -
2007 1.38629 1.38629 1.38629 1.38629
2008 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
2009 44 2.99255 3.65360 0.11020 3.56520 44 - -
2010 1.38629 1.38629 1.38629 1.38629
2011 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547
2012 45 0.13357 3.44557 2.84418 3.35349 45 - -
2013 1.38629 1.38629 1.38629 1.38629
2014 0.01791 4.03139 * 1.46634 0.26236 0.00000 *
2015 //
2016 HMMER3/b [3.0 | March 2010]
2017 NAME 3_End_Metazoa_58S_end_fortya_long
2018 LENG 45
2019 ALPH DNA
2020 RF no
2021 CS no
2022 MAP yes
2023 DATE Sat Feb 25 14:45:07 2012
2024 NSEQ 2
2025 EFFN 2.000000
2026 CKSUM 347263349
2027 STATS LOCAL MSV -7.4224 0.72886
2028 STATS LOCAL VITERBI -8.2750 0.72886
2029 STATS LOCAL FORWARD -3.5290 0.72886
2030 HMM A C G T
2031 m->m m->i m->d i->m i->i d->m d->d
2032 COMPO 1.51640 1.56418 1.43422 1.09980
2033 1.38629 1.38629 1.38629 1.38629
2034 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2035 1 2.81865 0.23582 2.88868 2.35662 1 - -
2036 1.38629 1.38629 1.38629 1.38629
2037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2038 2 0.23862 2.84929 2.43386 2.70756 2 - -
2039 1.38629 1.38629 1.38629 1.38629
2040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2041 3 2.57915 2.25909 2.64442 0.28946 3 - -
2042 1.38629 1.38629 1.38629 1.38629
2043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2044 4 2.53331 3.02441 0.20344 2.88069 4 - -
2045 1.38629 1.38629 1.38629 1.38629
2046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2047 5 2.53331 3.02441 0.20344 2.88069 5 - -
2048 1.38629 1.38629 1.38629 1.38629
2049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2050 6 0.23862 2.84929 2.43386 2.70756 6 - -
2051 1.38629 1.38629 1.38629 1.38629
2052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2053 7 2.57915 2.25909 2.64442 0.28946 7 - -
2054 1.38629 1.38629 1.38629 1.38629
2055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2056 8 2.53331 3.02441 0.20344 2.88069 8 - -
2057 1.38629 1.38629 1.38629 1.38629
2058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2059 9 2.81865 0.23582 2.88868 2.35662 9 - -
2060 1.38629 1.38629 1.38629 1.38629
2061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2062 10 0.23862 2.84929 2.43386 2.70756 10 - -
2063 1.38629 1.38629 1.38629 1.38629
2064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2065 11 2.57915 2.25909 2.64442 0.28946 11 - -
2066 1.38629 1.38629 1.38629 1.38629
2067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2068 12 2.53331 3.02441 0.20344 2.88069 12 - -
2069 1.38629 1.38629 1.38629 1.38629
2070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2071 13 2.81865 0.23582 2.88868 2.35662 13 - -
2072 1.38629 1.38629 1.38629 1.38629
2073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2074 14 2.53331 3.02441 0.20344 2.88069 14 - -
2075 1.38629 1.38629 1.38629 1.38629
2076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2077 15 2.57915 2.25909 2.64442 0.28946 15 - -
2078 1.38629 1.38629 1.38629 1.38629
2079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2080 16 2.53331 3.02441 0.20344 2.88069 16 - -
2081 1.38629 1.38629 1.38629 1.38629
2082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2083 17 2.57915 2.25909 2.64442 0.28946 17 - -
2084 1.38629 1.38629 1.38629 1.38629
2085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2086 18 2.81865 0.23582 2.88868 2.35662 18 - -
2087 1.38629 1.38629 1.38629 1.38629
2088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2089 19 2.57915 2.25909 2.64442 0.28946 19 - -
2090 1.38629 1.38629 1.38629 1.38629
2091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2092 20 0.23862 2.84929 2.43386 2.70756 20 - -
2093 1.38629 1.38629 1.38629 1.38629
2094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2095 21 2.57915 2.25909 2.64442 0.28946 21 - -
2096 1.38629 1.38629 1.38629 1.38629
2097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2098 22 2.53331 3.02441 0.20344 2.88069 22 - -
2099 1.38629 1.38629 1.38629 1.38629
2100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2101 23 2.81865 0.23582 2.88868 2.35662 23 - -
2102 1.38629 1.38629 1.38629 1.38629
2103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2104 24 2.57915 2.25909 2.64442 0.28946 24 - -
2105 1.38629 1.38629 1.38629 1.38629
2106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2107 25 2.53331 3.02441 0.20344 2.88069 25 - -
2108 1.38629 1.38629 1.38629 1.38629
2109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2110 26 2.81865 0.23582 2.88868 2.35662 26 - -
2111 1.38629 1.38629 1.38629 1.38629
2112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2113 27 0.23862 2.84929 2.43386 2.70756 27 - -
2114 1.38629 1.38629 1.38629 1.38629
2115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2116 28 2.57915 2.25909 2.64442 0.28946 28 - -
2117 1.38629 1.38629 1.38629 1.38629
2118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2119 29 2.57915 2.25909 2.64442 0.28946 29 - -
2120 1.38629 1.38629 1.38629 1.38629
2121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2122 30 2.57915 2.25909 2.64442 0.28946 30 - -
2123 1.38629 1.38629 1.38629 1.38629
2124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2125 31 2.53331 3.02441 0.20344 2.88069 31 - -
2126 1.38629 1.38629 1.38629 1.38629
2127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2128 32 2.57915 2.25909 2.64442 0.28946 32 - -
2129 1.38629 1.38629 1.38629 1.38629
2130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2131 33 2.57915 2.25909 2.64442 0.28946 33 - -
2132 1.38629 1.38629 1.38629 1.38629
2133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2134 34 2.57915 2.25909 2.64442 0.28946 34 - -
2135 1.38629 1.38629 1.38629 1.38629
2136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2137 35 2.81865 0.23582 2.88868 2.35662 35 - -
2138 1.38629 1.38629 1.38629 1.38629
2139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2140 36 0.23862 2.84929 2.43386 2.70756 36 - -
2141 1.38629 1.38629 1.38629 1.38629
2142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2143 37 2.53331 3.02441 0.20344 2.88069 37 - -
2144 1.38629 1.38629 1.38629 1.38629
2145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2146 38 2.57915 2.25909 2.64442 0.28946 38 - -
2147 1.38629 1.38629 1.38629 1.38629
2148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2149 39 0.23862 2.84929 2.43386 2.70756 39 - -
2150 1.38629 1.38629 1.38629 1.38629
2151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2152 40 2.57915 2.25909 2.64442 0.28946 40 - -
2153 1.38629 1.38629 1.38629 1.38629
2154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2155 41 0.23862 2.84929 2.43386 2.70756 41 - -
2156 1.38629 1.38629 1.38629 1.38629
2157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2158 42 2.57915 2.25909 2.64442 0.28946 42 - -
2159 1.38629 1.38629 1.38629 1.38629
2160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2161 43 0.23862 2.84929 2.43386 2.70756 43 - -
2162 1.38629 1.38629 1.38629 1.38629
2163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2164 44 2.57915 2.25909 2.64442 0.28946 44 - -
2165 1.38629 1.38629 1.38629 1.38629
2166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2167 45 2.81865 0.23582 2.88868 2.35662 45 - -
2168 1.38629 1.38629 1.38629 1.38629
2169 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2170 //
2171 HMMER3/b [3.0 | March 2010]
2172 NAME 3_End_Metazoa_58S_end_fortyb_long
2173 LENG 45
2174 ALPH DNA
2175 RF no
2176 CS no
2177 MAP yes
2178 DATE Sat Feb 25 14:45:12 2012
2179 NSEQ 21
2180 EFFN 3.652954
2181 CKSUM 2037448344
2182 STATS LOCAL MSV -7.7448 0.71932
2183 STATS LOCAL VITERBI -7.7103 0.71932
2184 STATS LOCAL FORWARD -4.4879 0.71932
2185 HMM A C G T
2186 m->m m->i m->d i->m i->i d->m d->d
2187 COMPO 1.34393 1.57885 1.68779 1.05544
2188 1.38629 1.38629 1.38629 1.38629
2189 0.03477 4.06953 4.06953 1.46634 0.26236 0.00000 *
2190 1 3.54809 0.11729 3.59253 2.91198 1 - -
2191 1.38629 1.38629 1.38629 1.38629
2192 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2193 2 0.12935 3.48040 2.86661 3.39172 2 - -
2194 1.38629 1.38629 1.38629 1.38629
2195 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2196 3 2.63410 1.48888 2.69945 0.45358 3 - -
2197 1.38629 1.38629 1.38629 1.38629
2198 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2199 4 3.01616 3.68835 0.10672 3.60370 4 - -
2200 1.38629 1.38629 1.38629 1.38629
2201 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2202 5 3.01616 3.68835 0.10672 3.60370 5 - -
2203 1.38629 1.38629 1.38629 1.38629
2204 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2205 6 0.12935 3.48040 2.86661 3.39172 6 - -
2206 1.38629 1.38629 1.38629 1.38629
2207 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2208 7 3.54809 0.11729 3.59253 2.91198 7 - -
2209 1.38629 1.38629 1.38629 1.38629
2210 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2211 8 0.12935 3.48040 2.86661 3.39172 8 - -
2212 1.38629 1.38629 1.38629 1.38629
2213 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2214 9 3.54809 0.11729 3.59253 2.91198 9 - -
2215 1.38629 1.38629 1.38629 1.38629
2216 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2217 10 3.19086 2.66004 3.23506 0.16304 10 - -
2218 1.38629 1.38629 1.38629 1.38629
2219 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2220 11 3.19086 2.66004 3.23506 0.16304 11 - -
2221 1.38629 1.38629 1.38629 1.38629
2222 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2223 12 3.54809 0.11729 3.59253 2.91198 12 - -
2224 1.38629 1.38629 1.38629 1.38629
2225 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2226 13 2.67383 2.44140 2.20688 0.30934 13 - -
2227 1.38629 1.38629 1.38629 1.38629
2228 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2229 14 3.01616 3.68835 0.10672 3.60370 14 - -
2230 1.38629 1.38629 1.38629 1.38629
2231 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2232 15 3.19086 2.66004 3.23506 0.16304 15 - -
2233 1.38629 1.38629 1.38629 1.38629
2234 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2235 16 0.30858 2.96134 1.86288 2.83816 16 - -
2236 1.38629 1.38629 1.38629 1.38629
2237 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2238 17 3.19086 2.66004 3.23506 0.16304 17 - -
2239 1.38629 1.38629 1.38629 1.38629
2240 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2241 18 3.54809 0.11729 3.59253 2.91198 18 - -
2242 1.38629 1.38629 1.38629 1.38629
2243 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2244 19 3.19086 2.66004 3.23506 0.16304 19 - -
2245 1.38629 1.38629 1.38629 1.38629
2246 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2247 20 3.01616 3.68835 0.10672 3.60370 20 - -
2248 1.38629 1.38629 1.38629 1.38629
2249 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2250 21 3.19086 2.66004 3.23506 0.16304 21 - -
2251 1.38629 1.38629 1.38629 1.38629
2252 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2253 22 3.01616 3.68835 0.10672 3.60370 22 - -
2254 1.38629 1.38629 1.38629 1.38629
2255 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2256 23 3.54809 0.11729 3.59253 2.91198 23 - -
2257 1.38629 1.38629 1.38629 1.38629
2258 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2259 24 3.19086 2.66004 3.23506 0.16304 24 - -
2260 1.38629 1.38629 1.38629 1.38629
2261 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2262 25 0.12935 3.48040 2.86661 3.39172 25 - -
2263 1.38629 1.38629 1.38629 1.38629
2264 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2265 26 3.54809 0.11729 3.59253 2.91198 26 - -
2266 1.38629 1.38629 1.38629 1.38629
2267 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2268 27 0.12935 3.48040 2.86661 3.39172 27 - -
2269 1.38629 1.38629 1.38629 1.38629
2270 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2271 28 3.19086 2.66004 3.23506 0.16304 28 - -
2272 1.38629 1.38629 1.38629 1.38629
2273 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2274 29 3.19086 2.66004 3.23506 0.16304 29 - -
2275 1.38629 1.38629 1.38629 1.38629
2276 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2277 30 3.19086 2.66004 3.23506 0.16304 30 - -
2278 1.38629 1.38629 1.38629 1.38629
2279 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2280 31 3.01616 3.68835 0.10672 3.60370 31 - -
2281 1.38629 1.38629 1.38629 1.38629
2282 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2283 32 3.19086 2.66004 3.23506 0.16304 32 - -
2284 1.38629 1.38629 1.38629 1.38629
2285 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2286 33 3.19086 2.66004 3.23506 0.16304 33 - -
2287 1.38629 1.38629 1.38629 1.38629
2288 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2289 34 3.19086 2.66004 3.23506 0.16304 34 - -
2290 1.38629 1.38629 1.38629 1.38629
2291 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2292 35 3.54809 0.11729 3.59253 2.91198 35 - -
2293 1.38629 1.38629 1.38629 1.38629
2294 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2295 36 0.12935 3.48040 2.86661 3.39172 36 - -
2296 1.38629 1.38629 1.38629 1.38629
2297 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2298 37 3.01616 3.68835 0.10672 3.60370 37 - -
2299 1.38629 1.38629 1.38629 1.38629
2300 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2301 38 3.19086 2.66004 3.23506 0.16304 38 - -
2302 1.38629 1.38629 1.38629 1.38629
2303 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2304 39 0.12935 3.48040 2.86661 3.39172 39 - -
2305 1.38629 1.38629 1.38629 1.38629
2306 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2307 40 3.19086 2.66004 3.23506 0.16304 40 - -
2308 1.38629 1.38629 1.38629 1.38629
2309 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2310 41 0.12935 3.48040 2.86661 3.39172 41 - -
2311 1.38629 1.38629 1.38629 1.38629
2312 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2313 42 3.19086 2.66004 3.23506 0.16304 42 - -
2314 1.38629 1.38629 1.38629 1.38629
2315 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2316 43 0.12935 3.48040 2.86661 3.39172 43 - -
2317 1.38629 1.38629 1.38629 1.38629
2318 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2319 44 0.12935 3.48040 2.86661 3.39172 44 - -
2320 1.38629 1.38629 1.38629 1.38629
2321 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547
2322 45 0.12935 3.48040 2.86661 3.39172 45 - -
2323 1.38629 1.38629 1.38629 1.38629
2324 0.01754 4.05230 * 1.46634 0.26236 0.00000 *
2325 //
2326 HMMER3/b [3.0 | March 2010]
2327 NAME 3_End_Metazoa_58S_end_fortyc_long
2328 LENG 45
2329 ALPH DNA
2330 RF no
2331 CS no
2332 MAP yes
2333 DATE Sat Feb 25 14:45:18 2012
2334 NSEQ 2
2335 EFFN 2.000000
2336 CKSUM 1875509194
2337 STATS LOCAL MSV -7.4593 0.72883
2338 STATS LOCAL VITERBI -8.2848 0.72883
2339 STATS LOCAL FORWARD -3.4483 0.72883
2340 HMM A C G T
2341 m->m m->i m->d i->m i->i d->m d->d
2342 COMPO 1.45589 1.50091 1.49628 1.13969
2343 1.38629 1.38629 1.38629 1.38629
2344 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2345 1 2.53331 3.02441 0.20344 2.88069 1 - -
2346 1.38629 1.38629 1.38629 1.38629
2347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2348 2 2.81865 0.23582 2.88868 2.35662 2 - -
2349 1.38629 1.38629 1.38629 1.38629
2350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2351 3 0.23862 2.84929 2.43386 2.70756 3 - -
2352 1.38629 1.38629 1.38629 1.38629
2353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2354 4 2.57915 2.25909 2.64442 0.28946 4 - -
2355 1.38629 1.38629 1.38629 1.38629
2356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2357 5 2.53331 3.02441 0.20344 2.88069 5 - -
2358 1.38629 1.38629 1.38629 1.38629
2359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2360 6 2.53331 3.02441 0.20344 2.88069 6 - -
2361 1.38629 1.38629 1.38629 1.38629
2362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2363 7 0.23862 2.84929 2.43386 2.70756 7 - -
2364 1.38629 1.38629 1.38629 1.38629
2365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2366 8 2.57915 2.25909 2.64442 0.28946 8 - -
2367 1.38629 1.38629 1.38629 1.38629
2368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2369 9 2.53331 3.02441 0.20344 2.88069 9 - -
2370 1.38629 1.38629 1.38629 1.38629
2371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2372 10 2.81865 0.23582 2.88868 2.35662 10 - -
2373 1.38629 1.38629 1.38629 1.38629
2374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2375 11 2.81865 0.23582 2.88868 2.35662 11 - -
2376 1.38629 1.38629 1.38629 1.38629
2377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2378 12 2.57915 2.25909 2.64442 0.28946 12 - -
2379 1.38629 1.38629 1.38629 1.38629
2380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2381 13 2.57915 2.25909 2.64442 0.28946 13 - -
2382 1.38629 1.38629 1.38629 1.38629
2383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2384 14 2.53331 3.02441 0.20344 2.88069 14 - -
2385 1.38629 1.38629 1.38629 1.38629
2386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2387 15 2.57915 2.25909 2.64442 0.28946 15 - -
2388 1.38629 1.38629 1.38629 1.38629
2389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2390 16 2.53331 3.02441 0.20344 2.88069 16 - -
2391 1.38629 1.38629 1.38629 1.38629
2392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2393 17 2.57915 2.25909 2.64442 0.28946 17 - -
2394 1.38629 1.38629 1.38629 1.38629
2395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2396 18 2.81865 0.23582 2.88868 2.35662 18 - -
2397 1.38629 1.38629 1.38629 1.38629
2398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2399 19 2.57915 2.25909 2.64442 0.28946 19 - -
2400 1.38629 1.38629 1.38629 1.38629
2401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2402 20 0.23862 2.84929 2.43386 2.70756 20 - -
2403 1.38629 1.38629 1.38629 1.38629
2404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2405 21 2.57915 2.25909 2.64442 0.28946 21 - -
2406 1.38629 1.38629 1.38629 1.38629
2407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2408 22 2.53331 3.02441 0.20344 2.88069 22 - -
2409 1.38629 1.38629 1.38629 1.38629
2410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2411 23 2.81865 0.23582 2.88868 2.35662 23 - -
2412 1.38629 1.38629 1.38629 1.38629
2413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2414 24 2.57915 2.25909 2.64442 0.28946 24 - -
2415 1.38629 1.38629 1.38629 1.38629
2416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2417 25 0.23862 2.84929 2.43386 2.70756 25 - -
2418 1.38629 1.38629 1.38629 1.38629
2419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2420 26 2.81865 0.23582 2.88868 2.35662 26 - -
2421 1.38629 1.38629 1.38629 1.38629
2422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2423 27 0.23862 2.84929 2.43386 2.70756 27 - -
2424 1.38629 1.38629 1.38629 1.38629
2425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2426 28 2.81865 0.23582 2.88868 2.35662 28 - -
2427 1.38629 1.38629 1.38629 1.38629
2428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2429 29 2.57915 2.25909 2.64442 0.28946 29 - -
2430 1.38629 1.38629 1.38629 1.38629
2431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2432 30 2.57915 2.25909 2.64442 0.28946 30 - -
2433 1.38629 1.38629 1.38629 1.38629
2434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2435 31 2.53331 3.02441 0.20344 2.88069 31 - -
2436 1.38629 1.38629 1.38629 1.38629
2437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2438 32 2.57915 2.25909 2.64442 0.28946 32 - -
2439 1.38629 1.38629 1.38629 1.38629
2440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2441 33 2.57915 2.25909 2.64442 0.28946 33 - -
2442 1.38629 1.38629 1.38629 1.38629
2443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2444 34 2.57915 2.25909 2.64442 0.28946 34 - -
2445 1.38629 1.38629 1.38629 1.38629
2446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2447 35 2.81865 0.23582 2.88868 2.35662 35 - -
2448 1.38629 1.38629 1.38629 1.38629
2449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2450 36 0.23862 2.84929 2.43386 2.70756 36 - -
2451 1.38629 1.38629 1.38629 1.38629
2452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2453 37 2.53331 3.02441 0.20344 2.88069 37 - -
2454 1.38629 1.38629 1.38629 1.38629
2455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2456 38 2.57915 2.25909 2.64442 0.28946 38 - -
2457 1.38629 1.38629 1.38629 1.38629
2458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2459 39 0.23862 2.84929 2.43386 2.70756 39 - -
2460 1.38629 1.38629 1.38629 1.38629
2461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2462 40 2.57915 2.25909 2.64442 0.28946 40 - -
2463 1.38629 1.38629 1.38629 1.38629
2464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2465 41 0.23862 2.84929 2.43386 2.70756 41 - -
2466 1.38629 1.38629 1.38629 1.38629
2467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2468 42 2.57915 2.25909 2.64442 0.28946 42 - -
2469 1.38629 1.38629 1.38629 1.38629
2470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2471 43 0.23862 2.84929 2.43386 2.70756 43 - -
2472 1.38629 1.38629 1.38629 1.38629
2473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2474 44 0.23862 2.84929 2.43386 2.70756 44 - -
2475 1.38629 1.38629 1.38629 1.38629
2476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2477 45 2.81865 0.23582 2.88868 2.35662 45 - -
2478 1.38629 1.38629 1.38629 1.38629
2479 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2480 //
2481 HMMER3/b [3.0 | March 2010]
2482 NAME 3_End_Metazoa_58S_end_fortyd_long
2483 LENG 45
2484 ALPH DNA
2485 RF no
2486 CS no
2487 MAP yes
2488 DATE Sat Feb 25 14:45:24 2012
2489 NSEQ 2
2490 EFFN 2.000000
2491 CKSUM 2094167418
2492 STATS LOCAL MSV -7.2815 0.72957
2493 STATS LOCAL VITERBI -8.1713 0.72957
2494 STATS LOCAL FORWARD -3.4471 0.72957
2495 HMM A C G T
2496 m->m m->i m->d i->m i->i d->m d->d
2497 COMPO 1.21312 1.69555 1.55125 1.18009
2498 1.38629 1.38629 1.38629 1.38629
2499 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2500 1 2.57915 2.25909 2.64442 0.28946 1 - -
2501 1.38629 1.38629 1.38629 1.38629
2502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2503 2 0.23862 2.84929 2.43386 2.70756 2 - -
2504 1.38629 1.38629 1.38629 1.38629
2505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2506 3 2.81865 0.23582 2.88868 2.35662 3 - -
2507 1.38629 1.38629 1.38629 1.38629
2508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2509 4 0.23862 2.84929 2.43386 2.70756 4 - -
2510 1.38629 1.38629 1.38629 1.38629
2511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2512 5 2.53331 3.02441 0.20344 2.88069 5 - -
2513 1.38629 1.38629 1.38629 1.38629
2514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2515 6 0.23862 2.84929 2.43386 2.70756 6 - -
2516 1.38629 1.38629 1.38629 1.38629
2517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2518 7 2.57915 2.25909 2.64442 0.28946 7 - -
2519 1.38629 1.38629 1.38629 1.38629
2520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2521 8 2.53331 3.02441 0.20344 2.88069 8 - -
2522 1.38629 1.38629 1.38629 1.38629
2523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2524 9 2.81865 0.23582 2.88868 2.35662 9 - -
2525 1.38629 1.38629 1.38629 1.38629
2526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2527 10 2.53331 3.02441 0.20344 2.88069 10 - -
2528 1.38629 1.38629 1.38629 1.38629
2529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2530 11 0.23862 2.84929 2.43386 2.70756 11 - -
2531 1.38629 1.38629 1.38629 1.38629
2532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2533 12 0.23862 2.84929 2.43386 2.70756 12 - -
2534 1.38629 1.38629 1.38629 1.38629
2535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2536 13 2.57915 2.25909 2.64442 0.28946 13 - -
2537 1.38629 1.38629 1.38629 1.38629
2538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2539 14 2.53331 3.02441 0.20344 2.88069 14 - -
2540 1.38629 1.38629 1.38629 1.38629
2541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2542 15 2.57915 2.25909 2.64442 0.28946 15 - -
2543 1.38629 1.38629 1.38629 1.38629
2544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2545 16 0.23862 2.84929 2.43386 2.70756 16 - -
2546 1.38629 1.38629 1.38629 1.38629
2547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2548 17 2.57915 2.25909 2.64442 0.28946 17 - -
2549 1.38629 1.38629 1.38629 1.38629
2550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2551 18 2.81865 0.23582 2.88868 2.35662 18 - -
2552 1.38629 1.38629 1.38629 1.38629
2553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2554 19 2.57915 2.25909 2.64442 0.28946 19 - -
2555 1.38629 1.38629 1.38629 1.38629
2556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2557 20 0.23862 2.84929 2.43386 2.70756 20 - -
2558 1.38629 1.38629 1.38629 1.38629
2559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2560 21 2.57915 2.25909 2.64442 0.28946 21 - -
2561 1.38629 1.38629 1.38629 1.38629
2562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2563 22 2.53331 3.02441 0.20344 2.88069 22 - -
2564 1.38629 1.38629 1.38629 1.38629
2565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2566 23 2.81865 0.23582 2.88868 2.35662 23 - -
2567 1.38629 1.38629 1.38629 1.38629
2568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2569 24 2.57915 2.25909 2.64442 0.28946 24 - -
2570 1.38629 1.38629 1.38629 1.38629
2571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2572 25 2.53331 3.02441 0.20344 2.88069 25 - -
2573 1.38629 1.38629 1.38629 1.38629
2574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2575 26 2.81865 0.23582 2.88868 2.35662 26 - -
2576 1.38629 1.38629 1.38629 1.38629
2577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2578 27 0.23862 2.84929 2.43386 2.70756 27 - -
2579 1.38629 1.38629 1.38629 1.38629
2580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2581 28 2.57915 2.25909 2.64442 0.28946 28 - -
2582 1.38629 1.38629 1.38629 1.38629
2583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2584 29 2.57915 2.25909 2.64442 0.28946 29 - -
2585 1.38629 1.38629 1.38629 1.38629
2586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2587 30 2.57915 2.25909 2.64442 0.28946 30 - -
2588 1.38629 1.38629 1.38629 1.38629
2589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2590 31 2.53331 3.02441 0.20344 2.88069 31 - -
2591 1.38629 1.38629 1.38629 1.38629
2592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2593 32 2.57915 2.25909 2.64442 0.28946 32 - -
2594 1.38629 1.38629 1.38629 1.38629
2595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2596 33 2.57915 2.25909 2.64442 0.28946 33 - -
2597 1.38629 1.38629 1.38629 1.38629
2598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2599 34 2.57915 2.25909 2.64442 0.28946 34 - -
2600 1.38629 1.38629 1.38629 1.38629
2601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2602 35 2.81865 0.23582 2.88868 2.35662 35 - -
2603 1.38629 1.38629 1.38629 1.38629
2604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2605 36 0.23862 2.84929 2.43386 2.70756 36 - -
2606 1.38629 1.38629 1.38629 1.38629
2607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2608 37 2.53331 3.02441 0.20344 2.88069 37 - -
2609 1.38629 1.38629 1.38629 1.38629
2610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2611 38 2.57915 2.25909 2.64442 0.28946 38 - -
2612 1.38629 1.38629 1.38629 1.38629
2613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2614 39 0.23862 2.84929 2.43386 2.70756 39 - -
2615 1.38629 1.38629 1.38629 1.38629
2616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2617 40 2.57915 2.25909 2.64442 0.28946 40 - -
2618 1.38629 1.38629 1.38629 1.38629
2619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2620 41 0.23862 2.84929 2.43386 2.70756 41 - -
2621 1.38629 1.38629 1.38629 1.38629
2622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2623 42 1.01448 1.11006 1.95471 1.79419 42 - -
2624 1.38629 1.38629 1.38629 1.38629
2625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2626 43 0.23862 2.84929 2.43386 2.70756 43 - -
2627 1.38629 1.38629 1.38629 1.38629
2628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2629 44 0.23862 2.84929 2.43386 2.70756 44 - -
2630 1.38629 1.38629 1.38629 1.38629
2631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2632 45 0.23862 2.84929 2.43386 2.70756 45 - -
2633 1.38629 1.38629 1.38629 1.38629
2634 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2635 //
2636 HMMER3/b [3.0 | March 2010]
2637 NAME 3_End_Metazoa_58S_end_fortye_long
2638 LENG 45
2639 ALPH DNA
2640 RF no
2641 CS no
2642 MAP yes
2643 DATE Sat Feb 25 14:45:29 2012
2644 NSEQ 3
2645 EFFN 3.000000
2646 CKSUM 3941219966
2647 STATS LOCAL MSV -8.0155 0.72136
2648 STATS LOCAL VITERBI -7.9080 0.72136
2649 STATS LOCAL FORWARD -3.8167 0.72136
2650 HMM A C G T
2651 m->m m->i m->d i->m i->i d->m d->d
2652 COMPO 1.38221 1.76473 1.47045 1.05577
2653 1.38629 1.38629 1.38629 1.38629
2654 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
2655 1 2.97980 2.52563 3.03204 0.19727 1 - -
2656 1.38629 1.38629 1.38629 1.38629
2657 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2658 2 3.30705 0.14631 3.36166 2.73626 2 - -
2659 1.38629 1.38629 1.38629 1.38629
2660 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2661 3 0.15719 3.27118 2.73043 3.16274 3 - -
2662 1.38629 1.38629 1.38629 1.38629
2663 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2664 4 2.86982 3.47591 0.13017 3.36931 4 - -
2665 1.38629 1.38629 1.38629 1.38629
2666 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2667 5 2.97980 2.52563 3.03204 0.19727 5 - -
2668 1.38629 1.38629 1.38629 1.38629
2669 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2670 6 0.15719 3.27118 2.73043 3.16274 6 - -
2671 1.38629 1.38629 1.38629 1.38629
2672 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2673 7 2.97980 2.52563 3.03204 0.19727 7 - -
2674 1.38629 1.38629 1.38629 1.38629
2675 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2676 8 1.34853 2.58976 0.54705 2.44542 8 - -
2677 1.38629 1.38629 1.38629 1.38629
2678 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2679 9 2.86982 3.47591 0.13017 3.36931 9 - -
2680 1.38629 1.38629 1.38629 1.38629
2681 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2682 10 0.15719 3.27118 2.73043 3.16274 10 - -
2683 1.38629 1.38629 1.38629 1.38629
2684 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2685 11 2.97980 2.52563 3.03204 0.19727 11 - -
2686 1.38629 1.38629 1.38629 1.38629
2687 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2688 12 0.15719 3.27118 2.73043 3.16274 12 - -
2689 1.38629 1.38629 1.38629 1.38629
2690 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2691 13 2.97980 2.52563 3.03204 0.19727 13 - -
2692 1.38629 1.38629 1.38629 1.38629
2693 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2694 14 2.97980 2.52563 3.03204 0.19727 14 - -
2695 1.38629 1.38629 1.38629 1.38629
2696 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2697 15 0.15719 3.27118 2.73043 3.16274 15 - -
2698 1.38629 1.38629 1.38629 1.38629
2699 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2700 16 2.97980 2.52563 3.03204 0.19727 16 - -
2701 1.38629 1.38629 1.38629 1.38629
2702 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2703 17 2.97980 2.52563 3.03204 0.19727 17 - -
2704 1.38629 1.38629 1.38629 1.38629
2705 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2706 18 3.30705 0.14631 3.36166 2.73626 18 - -
2707 1.38629 1.38629 1.38629 1.38629
2708 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2709 19 2.97980 2.52563 3.03204 0.19727 19 - -
2710 1.38629 1.38629 1.38629 1.38629
2711 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2712 20 2.86982 3.47591 0.13017 3.36931 20 - -
2713 1.38629 1.38629 1.38629 1.38629
2714 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2715 21 2.97980 2.52563 3.03204 0.19727 21 - -
2716 1.38629 1.38629 1.38629 1.38629
2717 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2718 22 2.86982 3.47591 0.13017 3.36931 22 - -
2719 1.38629 1.38629 1.38629 1.38629
2720 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2721 23 3.30705 0.14631 3.36166 2.73626 23 - -
2722 1.38629 1.38629 1.38629 1.38629
2723 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2724 24 2.97980 2.52563 3.03204 0.19727 24 - -
2725 1.38629 1.38629 1.38629 1.38629
2726 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2727 25 0.15719 3.27118 2.73043 3.16274 25 - -
2728 1.38629 1.38629 1.38629 1.38629
2729 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2730 26 3.30705 0.14631 3.36166 2.73626 26 - -
2731 1.38629 1.38629 1.38629 1.38629
2732 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2733 27 0.15719 3.27118 2.73043 3.16274 27 - -
2734 1.38629 1.38629 1.38629 1.38629
2735 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2736 28 2.86982 3.47591 0.13017 3.36931 28 - -
2737 1.38629 1.38629 1.38629 1.38629
2738 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2739 29 2.97980 2.52563 3.03204 0.19727 29 - -
2740 1.38629 1.38629 1.38629 1.38629
2741 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2742 30 2.97980 2.52563 3.03204 0.19727 30 - -
2743 1.38629 1.38629 1.38629 1.38629
2744 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2745 31 2.86982 3.47591 0.13017 3.36931 31 - -
2746 1.38629 1.38629 1.38629 1.38629
2747 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2748 32 2.97980 2.52563 3.03204 0.19727 32 - -
2749 1.38629 1.38629 1.38629 1.38629
2750 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2751 33 2.97980 2.52563 3.03204 0.19727 33 - -
2752 1.38629 1.38629 1.38629 1.38629
2753 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2754 34 2.97980 2.52563 3.03204 0.19727 34 - -
2755 1.38629 1.38629 1.38629 1.38629
2756 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2757 35 3.30705 0.14631 3.36166 2.73626 35 - -
2758 1.38629 1.38629 1.38629 1.38629
2759 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2760 36 0.15719 3.27118 2.73043 3.16274 36 - -
2761 1.38629 1.38629 1.38629 1.38629
2762 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2763 37 2.86982 3.47591 0.13017 3.36931 37 - -
2764 1.38629 1.38629 1.38629 1.38629
2765 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2766 38 3.30705 0.14631 3.36166 2.73626 38 - -
2767 1.38629 1.38629 1.38629 1.38629
2768 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2769 39 0.15719 3.27118 2.73043 3.16274 39 - -
2770 1.38629 1.38629 1.38629 1.38629
2771 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2772 40 2.97980 2.52563 3.03204 0.19727 40 - -
2773 1.38629 1.38629 1.38629 1.38629
2774 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2775 41 0.15719 3.27118 2.73043 3.16274 41 - -
2776 1.38629 1.38629 1.38629 1.38629
2777 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2778 42 2.97980 2.52563 3.03204 0.19727 42 - -
2779 1.38629 1.38629 1.38629 1.38629
2780 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2781 43 2.86982 3.47591 0.13017 3.36931 43 - -
2782 1.38629 1.38629 1.38629 1.38629
2783 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2784 44 0.15719 3.27118 2.73043 3.16274 44 - -
2785 1.38629 1.38629 1.38629 1.38629
2786 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2787 45 2.86982 3.47591 0.13017 3.36931 45 - -
2788 1.38629 1.38629 1.38629 1.38629
2789 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
2790 //
2791 HMMER3/b [3.0 | March 2010]
2792 NAME 3_End_Metazoa_58S_end_fortyeighta_long
2793 LENG 45
2794 ALPH DNA
2795 RF no
2796 CS no
2797 MAP yes
2798 DATE Sat Feb 25 14:50:28 2012
2799 NSEQ 24
2800 EFFN 3.600586
2801 CKSUM 339122880
2802 STATS LOCAL MSV -7.1812 0.71931
2803 STATS LOCAL VITERBI -7.6039 0.71931
2804 STATS LOCAL FORWARD -4.3803 0.71931
2805 HMM A C G T
2806 m->m m->i m->d i->m i->i d->m d->d
2807 COMPO 1.90120 1.55283 1.08317 1.20250
2808 1.38629 1.38629 1.38629 1.38629
2809 0.03509 4.06054 4.06054 1.46634 0.26236 0.00000 *
2810 1 2.67626 3.05106 0.22851 2.42866 1 - -
2811 1.38629 1.38629 1.38629 1.38629
2812 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2813 2 3.00592 3.67326 0.10822 3.58698 2 - -
2814 1.38629 1.38629 1.38629 1.38629
2815 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2816 3 3.53074 0.11914 3.57596 2.89955 3 - -
2817 1.38629 1.38629 1.38629 1.38629
2818 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2819 4 3.00592 3.67326 0.10822 3.58698 4 - -
2820 1.38629 1.38629 1.38629 1.38629
2821 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2822 5 3.53074 0.11914 3.57596 2.89955 5 - -
2823 1.38629 1.38629 1.38629 1.38629
2824 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2825 6 3.17523 2.65013 3.22004 0.16532 6 - -
2826 1.38629 1.38629 1.38629 1.38629
2827 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2828 7 3.53074 0.11914 3.57596 2.89955 7 - -
2829 1.38629 1.38629 1.38629 1.38629
2830 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2831 8 3.17523 2.65013 3.22004 0.16532 8 - -
2832 1.38629 1.38629 1.38629 1.38629
2833 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2834 9 2.54397 0.59494 2.61524 1.21503 9 - -
2835 1.38629 1.38629 1.38629 1.38629
2836 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2837 10 3.00592 3.67326 0.10822 3.58698 10 - -
2838 1.38629 1.38629 1.38629 1.38629
2839 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2840 11 3.00592 3.67326 0.10822 3.58698 11 - -
2841 1.38629 1.38629 1.38629 1.38629
2842 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2843 12 3.17523 2.65013 3.22004 0.16532 12 - -
2844 1.38629 1.38629 1.38629 1.38629
2845 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2846 13 2.94163 2.11334 2.99577 0.25310 13 - -
2847 1.38629 1.38629 1.38629 1.38629
2848 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2849 14 0.13117 3.46525 2.85686 3.37508 14 - -
2850 1.38629 1.38629 1.38629 1.38629
2851 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2852 15 3.17523 2.65013 3.22004 0.16532 15 - -
2853 1.38629 1.38629 1.38629 1.38629
2854 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2855 16 0.13117 3.46525 2.85686 3.37508 16 - -
2856 1.38629 1.38629 1.38629 1.38629
2857 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2858 17 3.53074 0.11914 3.57596 2.89955 17 - -
2859 1.38629 1.38629 1.38629 1.38629
2860 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2861 18 3.53074 0.11914 3.57596 2.89955 18 - -
2862 1.38629 1.38629 1.38629 1.38629
2863 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2864 19 3.00592 3.67326 0.10822 3.58698 19 - -
2865 1.38629 1.38629 1.38629 1.38629
2866 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2867 20 3.00592 3.67326 0.10822 3.58698 20 - -
2868 1.38629 1.38629 1.38629 1.38629
2869 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2870 21 3.00592 3.67326 0.10822 3.58698 21 - -
2871 1.38629 1.38629 1.38629 1.38629
2872 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2873 22 0.13117 3.46525 2.85686 3.37508 22 - -
2874 1.38629 1.38629 1.38629 1.38629
2875 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2876 23 3.00592 3.67326 0.10822 3.58698 23 - -
2877 1.38629 1.38629 1.38629 1.38629
2878 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2879 24 3.53074 0.11914 3.57596 2.89955 24 - -
2880 1.38629 1.38629 1.38629 1.38629
2881 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2882 25 0.13117 3.46525 2.85686 3.37508 25 - -
2883 1.38629 1.38629 1.38629 1.38629
2884 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2885 26 3.17523 2.65013 3.22004 0.16532 26 - -
2886 1.38629 1.38629 1.38629 1.38629
2887 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2888 27 3.00592 3.67326 0.10822 3.58698 27 - -
2889 1.38629 1.38629 1.38629 1.38629
2890 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2891 28 3.17523 2.65013 3.22004 0.16532 28 - -
2892 1.38629 1.38629 1.38629 1.38629
2893 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2894 29 3.53074 0.11914 3.57596 2.89955 29 - -
2895 1.38629 1.38629 1.38629 1.38629
2896 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2897 30 3.17523 2.65013 3.22004 0.16532 30 - -
2898 1.38629 1.38629 1.38629 1.38629
2899 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2900 31 3.00592 3.67326 0.10822 3.58698 31 - -
2901 1.38629 1.38629 1.38629 1.38629
2902 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2903 32 3.17523 2.65013 3.22004 0.16532 32 - -
2904 1.38629 1.38629 1.38629 1.38629
2905 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2906 33 3.53074 0.11914 3.57596 2.89955 33 - -
2907 1.38629 1.38629 1.38629 1.38629
2908 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2909 34 3.17523 2.65013 3.22004 0.16532 34 - -
2910 1.38629 1.38629 1.38629 1.38629
2911 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2912 35 3.00592 3.67326 0.10822 3.58698 35 - -
2913 1.38629 1.38629 1.38629 1.38629
2914 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2915 36 0.13117 3.46525 2.85686 3.37508 36 - -
2916 1.38629 1.38629 1.38629 1.38629
2917 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2918 37 3.00592 3.67326 0.10822 3.58698 37 - -
2919 1.38629 1.38629 1.38629 1.38629
2920 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2921 38 3.17523 2.65013 3.22004 0.16532 38 - -
2922 1.38629 1.38629 1.38629 1.38629
2923 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2924 39 3.00592 3.67326 0.10822 3.58698 39 - -
2925 1.38629 1.38629 1.38629 1.38629
2926 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2927 40 3.17523 2.65013 3.22004 0.16532 40 - -
2928 1.38629 1.38629 1.38629 1.38629
2929 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2930 41 3.17523 2.65013 3.22004 0.16532 41 - -
2931 1.38629 1.38629 1.38629 1.38629
2932 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2933 42 3.00592 3.67326 0.10822 3.58698 42 - -
2934 1.38629 1.38629 1.38629 1.38629
2935 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2936 43 3.00592 3.67326 0.10822 3.58698 43 - -
2937 1.38629 1.38629 1.38629 1.38629
2938 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2939 44 3.17523 2.65013 3.22004 0.16532 44 - -
2940 1.38629 1.38629 1.38629 1.38629
2941 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547
2942 45 1.27511 2.19060 2.26638 0.68307 45 - -
2943 1.38629 1.38629 1.38629 1.38629
2944 0.01770 4.04315 * 1.46634 0.26236 0.00000 *
2945 //
2946 HMMER3/b [3.0 | March 2010]
2947 NAME 3_End_Metazoa_58S_end_fortyeightb_long
2948 LENG 45
2949 ALPH DNA
2950 RF no
2951 CS no
2952 MAP yes
2953 DATE Sat Feb 25 14:50:35 2012
2954 NSEQ 2
2955 EFFN 2.000000
2956 CKSUM 3925285296
2957 STATS LOCAL MSV -7.6206 0.72748
2958 STATS LOCAL VITERBI -8.1867 0.72748
2959 STATS LOCAL FORWARD -3.4877 0.72748
2960 HMM A C G T
2961 m->m m->i m->d i->m i->i d->m d->d
2962 COMPO 1.83239 1.19294 1.16979 1.48630
2963 1.38629 1.38629 1.38629 1.38629
2964 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2965 1 2.53331 3.02441 0.20344 2.88069 1 - -
2966 1.38629 1.38629 1.38629 1.38629
2967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2968 2 2.53331 3.02441 0.20344 2.88069 2 - -
2969 1.38629 1.38629 1.38629 1.38629
2970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2971 3 2.81865 0.23582 2.88868 2.35662 3 - -
2972 1.38629 1.38629 1.38629 1.38629
2973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2974 4 2.53331 3.02441 0.20344 2.88069 4 - -
2975 1.38629 1.38629 1.38629 1.38629
2976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2977 5 2.81865 0.23582 2.88868 2.35662 5 - -
2978 1.38629 1.38629 1.38629 1.38629
2979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2980 6 2.57915 2.25909 2.64442 0.28946 6 - -
2981 1.38629 1.38629 1.38629 1.38629
2982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2983 7 2.81865 0.23582 2.88868 2.35662 7 - -
2984 1.38629 1.38629 1.38629 1.38629
2985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2986 8 2.81865 0.23582 2.88868 2.35662 8 - -
2987 1.38629 1.38629 1.38629 1.38629
2988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2989 9 2.81865 0.23582 2.88868 2.35662 9 - -
2990 1.38629 1.38629 1.38629 1.38629
2991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2992 10 2.53331 3.02441 0.20344 2.88069 10 - -
2993 1.38629 1.38629 1.38629 1.38629
2994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2995 11 2.53331 3.02441 0.20344 2.88069 11 - -
2996 1.38629 1.38629 1.38629 1.38629
2997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2998 12 2.57915 2.25909 2.64442 0.28946 12 - -
2999 1.38629 1.38629 1.38629 1.38629
3000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3001 13 2.81865 0.23582 2.88868 2.35662 13 - -
3002 1.38629 1.38629 1.38629 1.38629
3003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3004 14 0.23862 2.84929 2.43386 2.70756 14 - -
3005 1.38629 1.38629 1.38629 1.38629
3006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3007 15 0.23862 2.84929 2.43386 2.70756 15 - -
3008 1.38629 1.38629 1.38629 1.38629
3009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3010 16 2.53331 3.02441 0.20344 2.88069 16 - -
3011 1.38629 1.38629 1.38629 1.38629
3012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3013 17 2.81865 0.23582 2.88868 2.35662 17 - -
3014 1.38629 1.38629 1.38629 1.38629
3015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3016 18 2.81865 0.23582 2.88868 2.35662 18 - -
3017 1.38629 1.38629 1.38629 1.38629
3018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3019 19 2.53331 3.02441 0.20344 2.88069 19 - -
3020 1.38629 1.38629 1.38629 1.38629
3021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3022 20 2.53331 3.02441 0.20344 2.88069 20 - -
3023 1.38629 1.38629 1.38629 1.38629
3024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3025 21 2.53331 3.02441 0.20344 2.88069 21 - -
3026 1.38629 1.38629 1.38629 1.38629
3027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3028 22 0.23862 2.84929 2.43386 2.70756 22 - -
3029 1.38629 1.38629 1.38629 1.38629
3030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3031 23 2.53331 3.02441 0.20344 2.88069 23 - -
3032 1.38629 1.38629 1.38629 1.38629
3033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3034 24 2.81865 0.23582 2.88868 2.35662 24 - -
3035 1.38629 1.38629 1.38629 1.38629
3036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3037 25 0.23862 2.84929 2.43386 2.70756 25 - -
3038 1.38629 1.38629 1.38629 1.38629
3039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3040 26 2.81865 0.23582 2.88868 2.35662 26 - -
3041 1.38629 1.38629 1.38629 1.38629
3042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3043 27 2.53331 3.02441 0.20344 2.88069 27 - -
3044 1.38629 1.38629 1.38629 1.38629
3045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3046 28 2.57915 2.25909 2.64442 0.28946 28 - -
3047 1.38629 1.38629 1.38629 1.38629
3048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3049 29 2.81865 0.23582 2.88868 2.35662 29 - -
3050 1.38629 1.38629 1.38629 1.38629
3051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3052 30 2.57915 2.25909 2.64442 0.28946 30 - -
3053 1.38629 1.38629 1.38629 1.38629
3054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3055 31 2.53331 3.02441 0.20344 2.88069 31 - -
3056 1.38629 1.38629 1.38629 1.38629
3057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3058 32 2.57915 2.25909 2.64442 0.28946 32 - -
3059 1.38629 1.38629 1.38629 1.38629
3060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3061 33 2.81865 0.23582 2.88868 2.35662 33 - -
3062 1.38629 1.38629 1.38629 1.38629
3063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3064 34 2.57915 2.25909 2.64442 0.28946 34 - -
3065 1.38629 1.38629 1.38629 1.38629
3066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3067 35 2.53331 3.02441 0.20344 2.88069 35 - -
3068 1.38629 1.38629 1.38629 1.38629
3069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3070 36 0.23862 2.84929 2.43386 2.70756 36 - -
3071 1.38629 1.38629 1.38629 1.38629
3072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3073 37 2.53331 3.02441 0.20344 2.88069 37 - -
3074 1.38629 1.38629 1.38629 1.38629
3075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3076 38 2.81865 0.23582 2.88868 2.35662 38 - -
3077 1.38629 1.38629 1.38629 1.38629
3078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3079 39 2.53331 3.02441 0.20344 2.88069 39 - -
3080 1.38629 1.38629 1.38629 1.38629
3081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3082 40 2.57915 2.25909 2.64442 0.28946 40 - -
3083 1.38629 1.38629 1.38629 1.38629
3084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3085 41 2.81865 0.23582 2.88868 2.35662 41 - -
3086 1.38629 1.38629 1.38629 1.38629
3087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3088 42 2.81865 0.23582 2.88868 2.35662 42 - -
3089 1.38629 1.38629 1.38629 1.38629
3090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3091 43 2.57915 2.25909 2.64442 0.28946 43 - -
3092 1.38629 1.38629 1.38629 1.38629
3093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3094 44 2.57915 2.25909 2.64442 0.28946 44 - -
3095 1.38629 1.38629 1.38629 1.38629
3096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3097 45 2.57915 2.25909 2.64442 0.28946 45 - -
3098 1.38629 1.38629 1.38629 1.38629
3099 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
3100 //
3101 HMMER3/b [3.0 | March 2010]
3102 NAME 3_End_Metazoa_58S_end_fortyeightc_long
3103 LENG 45
3104 ALPH DNA
3105 RF no
3106 CS no
3107 MAP yes
3108 DATE Sat Feb 25 14:50:39 2012
3109 NSEQ 5
3110 EFFN 3.159180
3111 CKSUM 993596914
3112 STATS LOCAL MSV -8.2623 0.71933
3113 STATS LOCAL VITERBI -7.7665 0.71933
3114 STATS LOCAL FORWARD -4.2175 0.71933
3115 HMM A C G T
3116 m->m m->i m->d i->m i->i d->m d->d
3117 COMPO 1.92935 1.26519 1.09230 1.43915
3118 1.38629 1.38629 1.38629 1.38629
3119 0.03803 3.98140 3.98140 1.46634 0.26236 0.00000 *
3120 1 2.90962 3.53288 0.12335 3.43193 1 - -
3121 1.38629 1.38629 1.38629 1.38629
3122 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3123 2 2.90962 3.53288 0.12335 3.43193 2 - -
3124 1.38629 1.38629 1.38629 1.38629
3125 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3126 3 3.37101 0.13787 3.42306 2.78357 3 - -
3127 1.38629 1.38629 1.38629 1.38629
3128 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3129 4 2.90962 3.53288 0.12335 3.43193 4 - -
3130 1.38629 1.38629 1.38629 1.38629
3131 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3132 5 3.37101 0.13787 3.42306 2.78357 5 - -
3133 1.38629 1.38629 1.38629 1.38629
3134 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3135 6 3.03462 2.56074 3.08483 0.18763 6 - -
3136 1.38629 1.38629 1.38629 1.38629
3137 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3138 7 3.37101 0.13787 3.42306 2.78357 7 - -
3139 1.38629 1.38629 1.38629 1.38629
3140 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3141 8 3.03462 2.56074 3.08483 0.18763 8 - -
3142 1.38629 1.38629 1.38629 1.38629
3143 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3144 9 3.37101 0.13787 3.42306 2.78357 9 - -
3145 1.38629 1.38629 1.38629 1.38629
3146 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3147 10 2.90962 3.53288 0.12335 3.43193 10 - -
3148 1.38629 1.38629 1.38629 1.38629
3149 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3150 11 2.90962 3.53288 0.12335 3.43193 11 - -
3151 1.38629 1.38629 1.38629 1.38629
3152 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3153 12 3.03462 2.56074 3.08483 0.18763 12 - -
3154 1.38629 1.38629 1.38629 1.38629
3155 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3156 13 3.37101 0.13787 3.42306 2.78357 13 - -
3157 1.38629 1.38629 1.38629 1.38629
3158 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3159 14 0.14921 3.32646 2.76683 3.22308 14 - -
3160 1.38629 1.38629 1.38629 1.38629
3161 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3162 15 0.14921 3.32646 2.76683 3.22308 15 - -
3163 1.38629 1.38629 1.38629 1.38629
3164 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3165 16 2.90962 3.53288 0.12335 3.43193 16 - -
3166 1.38629 1.38629 1.38629 1.38629
3167 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3168 17 3.37101 0.13787 3.42306 2.78357 17 - -
3169 1.38629 1.38629 1.38629 1.38629
3170 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3171 18 3.37101 0.13787 3.42306 2.78357 18 - -
3172 1.38629 1.38629 1.38629 1.38629
3173 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3174 19 2.90962 3.53288 0.12335 3.43193 19 - -
3175 1.38629 1.38629 1.38629 1.38629
3176 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3177 20 2.90962 3.53288 0.12335 3.43193 20 - -
3178 1.38629 1.38629 1.38629 1.38629
3179 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3180 21 2.90962 3.53288 0.12335 3.43193 21 - -
3181 1.38629 1.38629 1.38629 1.38629
3182 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3183 22 0.14921 3.32646 2.76683 3.22308 22 - -
3184 1.38629 1.38629 1.38629 1.38629
3185 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3186 23 2.90962 3.53288 0.12335 3.43193 23 - -
3187 1.38629 1.38629 1.38629 1.38629
3188 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3189 24 3.37101 0.13787 3.42306 2.78357 24 - -
3190 1.38629 1.38629 1.38629 1.38629
3191 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3192 25 0.14921 3.32646 2.76683 3.22308 25 - -
3193 1.38629 1.38629 1.38629 1.38629
3194 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3195 26 3.37101 0.13787 3.42306 2.78357 26 - -
3196 1.38629 1.38629 1.38629 1.38629
3197 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3198 27 2.90962 3.53288 0.12335 3.43193 27 - -
3199 1.38629 1.38629 1.38629 1.38629
3200 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3201 28 3.03462 2.56074 3.08483 0.18763 28 - -
3202 1.38629 1.38629 1.38629 1.38629
3203 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3204 29 3.37101 0.13787 3.42306 2.78357 29 - -
3205 1.38629 1.38629 1.38629 1.38629
3206 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3207 30 3.03462 2.56074 3.08483 0.18763 30 - -
3208 1.38629 1.38629 1.38629 1.38629
3209 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3210 31 2.90962 3.53288 0.12335 3.43193 31 - -
3211 1.38629 1.38629 1.38629 1.38629
3212 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3213 32 3.03462 2.56074 3.08483 0.18763 32 - -
3214 1.38629 1.38629 1.38629 1.38629
3215 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3216 33 3.37101 0.13787 3.42306 2.78357 33 - -
3217 1.38629 1.38629 1.38629 1.38629
3218 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3219 34 3.03462 2.56074 3.08483 0.18763 34 - -
3220 1.38629 1.38629 1.38629 1.38629
3221 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3222 35 2.90962 3.53288 0.12335 3.43193 35 - -
3223 1.38629 1.38629 1.38629 1.38629
3224 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3225 36 0.14921 3.32646 2.76683 3.22308 36 - -
3226 1.38629 1.38629 1.38629 1.38629
3227 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3228 37 2.90962 3.53288 0.12335 3.43193 37 - -
3229 1.38629 1.38629 1.38629 1.38629
3230 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3231 38 3.37101 0.13787 3.42306 2.78357 38 - -
3232 1.38629 1.38629 1.38629 1.38629
3233 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3234 39 2.90962 3.53288 0.12335 3.43193 39 - -
3235 1.38629 1.38629 1.38629 1.38629
3236 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3237 40 3.03462 2.56074 3.08483 0.18763 40 - -
3238 1.38629 1.38629 1.38629 1.38629
3239 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3240 41 3.37101 0.13787 3.42306 2.78357 41 - -
3241 1.38629 1.38629 1.38629 1.38629
3242 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3243 42 3.03462 2.56074 3.08483 0.18763 42 - -
3244 1.38629 1.38629 1.38629 1.38629
3245 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3246 43 2.90962 3.53288 0.12335 3.43193 43 - -
3247 1.38629 1.38629 1.38629 1.38629
3248 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3249 44 3.03462 2.56074 3.08483 0.18763 44 - -
3250 1.38629 1.38629 1.38629 1.38629
3251 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
3252 45 3.03462 2.56074 3.08483 0.18763 45 - -
3253 1.38629 1.38629 1.38629 1.38629
3254 0.01920 3.96256 * 1.46634 0.26236 0.00000 *
3255 //
3256 HMMER3/b [3.0 | March 2010]
3257 NAME 3_End_Metazoa_58S_end_fortyeightd_long
3258 LENG 45
3259 ALPH DNA
3260 RF no
3261 CS no
3262 MAP yes
3263 DATE Sat Feb 25 14:50:46 2012
3264 NSEQ 4
3265 EFFN 3.472656
3266 CKSUM 2657486391
3267 STATS LOCAL MSV -7.5605 0.71932
3268 STATS LOCAL VITERBI -7.7169 0.71932
3269 STATS LOCAL FORWARD -4.4119 0.71932
3270 HMM A C G T
3271 m->m m->i m->d i->m i->i d->m d->d
3272 COMPO 1.88361 1.29724 1.11506 1.39926
3273 1.38629 1.38629 1.38629 1.38629
3274 0.03589 4.03824 4.03824 1.46634 0.26236 0.00000 *
3275 1 2.97992 3.63506 0.11211 3.54469 1 - -
3276 1.38629 1.38629 1.38629 1.38629
3277 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3278 2 2.97992 3.63506 0.11211 3.54469 2 - -
3279 1.38629 1.38629 1.38629 1.38629
3280 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3281 3 3.48700 0.12396 3.53414 2.86806 3 - -
3282 1.38629 1.38629 1.38629 1.38629
3283 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3284 4 2.97992 3.63506 0.11211 3.54469 4 - -
3285 1.38629 1.38629 1.38629 1.38629
3286 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3287 5 3.48700 0.12396 3.53414 2.86806 5 - -
3288 1.38629 1.38629 1.38629 1.38629
3289 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3290 6 3.13614 2.62533 3.18246 0.17120 6 - -
3291 1.38629 1.38629 1.38629 1.38629
3292 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3293 7 3.13614 2.62533 3.18246 0.17120 7 - -
3294 1.38629 1.38629 1.38629 1.38629
3295 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3296 8 3.13614 2.62533 3.18246 0.17120 8 - -
3297 1.38629 1.38629 1.38629 1.38629
3298 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3299 9 3.48700 0.12396 3.53414 2.86806 9 - -
3300 1.38629 1.38629 1.38629 1.38629
3301 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3302 10 2.97992 3.63506 0.11211 3.54469 10 - -
3303 1.38629 1.38629 1.38629 1.38629
3304 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3305 11 2.97992 3.63506 0.11211 3.54469 11 - -
3306 1.38629 1.38629 1.38629 1.38629
3307 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3308 12 3.13614 2.62533 3.18246 0.17120 12 - -
3309 1.38629 1.38629 1.38629 1.38629
3310 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3311 13 0.13586 3.42710 2.83226 3.33324 13 - -
3312 1.38629 1.38629 1.38629 1.38629
3313 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3314 14 0.13586 3.42710 2.83226 3.33324 14 - -
3315 1.38629 1.38629 1.38629 1.38629
3316 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3317 15 0.83642 2.54006 0.92443 2.39556 15 - -
3318 1.38629 1.38629 1.38629 1.38629
3319 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3320 16 2.97992 3.63506 0.11211 3.54469 16 - -
3321 1.38629 1.38629 1.38629 1.38629
3322 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3323 17 3.48700 0.12396 3.53414 2.86806 17 - -
3324 1.38629 1.38629 1.38629 1.38629
3325 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3326 18 3.48700 0.12396 3.53414 2.86806 18 - -
3327 1.38629 1.38629 1.38629 1.38629
3328 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3329 19 2.97992 3.63506 0.11211 3.54469 19 - -
3330 1.38629 1.38629 1.38629 1.38629
3331 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3332 20 2.97992 3.63506 0.11211 3.54469 20 - -
3333 1.38629 1.38629 1.38629 1.38629
3334 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3335 21 2.97992 3.63506 0.11211 3.54469 21 - -
3336 1.38629 1.38629 1.38629 1.38629
3337 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3338 22 0.13586 3.42710 2.83226 3.33324 22 - -
3339 1.38629 1.38629 1.38629 1.38629
3340 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3341 23 2.97992 3.63506 0.11211 3.54469 23 - -
3342 1.38629 1.38629 1.38629 1.38629
3343 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3344 24 3.48700 0.12396 3.53414 2.86806 24 - -
3345 1.38629 1.38629 1.38629 1.38629
3346 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3347 25 0.13586 3.42710 2.83226 3.33324 25 - -
3348 1.38629 1.38629 1.38629 1.38629
3349 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3350 26 3.48700 0.12396 3.53414 2.86806 26 - -
3351 1.38629 1.38629 1.38629 1.38629
3352 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3353 27 2.97992 3.63506 0.11211 3.54469 27 - -
3354 1.38629 1.38629 1.38629 1.38629
3355 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3356 28 3.13614 2.62533 3.18246 0.17120 28 - -
3357 1.38629 1.38629 1.38629 1.38629
3358 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3359 29 3.48700 0.12396 3.53414 2.86806 29 - -
3360 1.38629 1.38629 1.38629 1.38629
3361 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3362 30 3.13614 2.62533 3.18246 0.17120 30 - -
3363 1.38629 1.38629 1.38629 1.38629
3364 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3365 31 2.97992 3.63506 0.11211 3.54469 31 - -
3366 1.38629 1.38629 1.38629 1.38629
3367 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3368 32 3.13614 2.62533 3.18246 0.17120 32 - -
3369 1.38629 1.38629 1.38629 1.38629
3370 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3371 33 3.48700 0.12396 3.53414 2.86806 33 - -
3372 1.38629 1.38629 1.38629 1.38629
3373 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3374 34 3.13614 2.62533 3.18246 0.17120 34 - -
3375 1.38629 1.38629 1.38629 1.38629
3376 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3377 35 2.97992 3.63506 0.11211 3.54469 35 - -
3378 1.38629 1.38629 1.38629 1.38629
3379 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3380 36 0.13586 3.42710 2.83226 3.33324 36 - -
3381 1.38629 1.38629 1.38629 1.38629
3382 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3383 37 2.97992 3.63506 0.11211 3.54469 37 - -
3384 1.38629 1.38629 1.38629 1.38629
3385 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3386 38 3.48700 0.12396 3.53414 2.86806 38 - -
3387 1.38629 1.38629 1.38629 1.38629
3388 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3389 39 2.97992 3.63506 0.11211 3.54469 39 - -
3390 1.38629 1.38629 1.38629 1.38629
3391 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3392 40 3.13614 2.62533 3.18246 0.17120 40 - -
3393 1.38629 1.38629 1.38629 1.38629
3394 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3395 41 3.48700 0.12396 3.53414 2.86806 41 - -
3396 1.38629 1.38629 1.38629 1.38629
3397 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3398 42 3.48700 0.12396 3.53414 2.86806 42 - -
3399 1.38629 1.38629 1.38629 1.38629
3400 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3401 43 2.62567 1.55366 2.69076 0.43339 43 - -
3402 1.38629 1.38629 1.38629 1.38629
3403 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3404 44 2.62567 1.55366 2.69076 0.43339 44 - -
3405 1.38629 1.38629 1.38629 1.38629
3406 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
3407 45 3.13614 2.62533 3.18246 0.17120 45 - -
3408 1.38629 1.38629 1.38629 1.38629
3409 0.01811 4.02046 * 1.46634 0.26236 0.00000 *
3410 //
3411 HMMER3/b [3.0 | March 2010]
3412 NAME 3_End_Metazoa_58S_end_fortyeighte_long
3413 LENG 45
3414 ALPH DNA
3415 RF no
3416 CS no
3417 MAP yes
3418 DATE Sat Feb 25 14:50:51 2012
3419 NSEQ 8
3420 EFFN 3.214844
3421 CKSUM 964389477
3422 STATS LOCAL MSV -8.0488 0.71933
3423 STATS LOCAL VITERBI -7.8773 0.71933
3424 STATS LOCAL FORWARD -4.3191 0.71933
3425 HMM A C G T
3426 m->m m->i m->d i->m i->i d->m d->d
3427 COMPO 2.19308 1.31777 1.09283 1.25376
3428 1.38629 1.38629 1.38629 1.38629
3429 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 *
3430 1 2.92285 3.55196 0.12115 3.45295 1 - -
3431 1.38629 1.38629 1.38629 1.38629
3432 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3433 2 2.92285 3.55196 0.12115 3.45295 2 - -
3434 1.38629 1.38629 1.38629 1.38629
3435 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3436 3 3.39256 0.13515 3.44371 2.79938 3 - -
3437 1.38629 1.38629 1.38629 1.38629
3438 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3439 4 2.92285 3.55196 0.12115 3.45295 4 - -
3440 1.38629 1.38629 1.38629 1.38629
3441 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3442 5 3.39256 0.13515 3.44371 2.79938 5 - -
3443 1.38629 1.38629 1.38629 1.38629
3444 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3445 6 3.05326 2.57263 3.10276 0.18448 6 - -
3446 1.38629 1.38629 1.38629 1.38629
3447 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3448 7 3.39256 0.13515 3.44371 2.79938 7 - -
3449 1.38629 1.38629 1.38629 1.38629
3450 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3451 8 3.05326 2.57263 3.10276 0.18448 8 - -
3452 1.38629 1.38629 1.38629 1.38629
3453 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3454 9 3.39256 0.13515 3.44371 2.79938 9 - -
3455 1.38629 1.38629 1.38629 1.38629
3456 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3457 10 2.92285 3.55196 0.12115 3.45295 10 - -
3458 1.38629 1.38629 1.38629 1.38629
3459 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3460 11 2.92285 3.55196 0.12115 3.45295 11 - -
3461 1.38629 1.38629 1.38629 1.38629
3462 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3463 12 3.05326 2.57263 3.10276 0.18448 12 - -
3464 1.38629 1.38629 1.38629 1.38629
3465 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3466 13 3.05326 2.57263 3.10276 0.18448 13 - -
3467 1.38629 1.38629 1.38629 1.38629
3468 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3469 14 3.05326 2.57263 3.10276 0.18448 14 - -
3470 1.38629 1.38629 1.38629 1.38629
3471 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3472 15 3.05326 2.57263 3.10276 0.18448 15 - -
3473 1.38629 1.38629 1.38629 1.38629
3474 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3475 16 2.92285 3.55196 0.12115 3.45295 16 - -
3476 1.38629 1.38629 1.38629 1.38629
3477 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3478 17 3.39256 0.13515 3.44371 2.79938 17 - -
3479 1.38629 1.38629 1.38629 1.38629
3480 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3481 18 3.39256 0.13515 3.44371 2.79938 18 - -
3482 1.38629 1.38629 1.38629 1.38629
3483 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3484 19 2.92285 3.55196 0.12115 3.45295 19 - -
3485 1.38629 1.38629 1.38629 1.38629
3486 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3487 20 2.92285 3.55196 0.12115 3.45295 20 - -
3488 1.38629 1.38629 1.38629 1.38629
3489 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3490 21 2.92285 3.55196 0.12115 3.45295 21 - -
3491 1.38629 1.38629 1.38629 1.38629
3492 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3493 22 0.14663 3.34511 2.77903 3.24347 22 - -
3494 1.38629 1.38629 1.38629 1.38629
3495 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3496 23 2.92285 3.55196 0.12115 3.45295 23 - -
3497 1.38629 1.38629 1.38629 1.38629
3498 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3499 24 3.39256 0.13515 3.44371 2.79938 24 - -
3500 1.38629 1.38629 1.38629 1.38629
3501 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3502 25 0.14663 3.34511 2.77903 3.24347 25 - -
3503 1.38629 1.38629 1.38629 1.38629
3504 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3505 26 3.39256 0.13515 3.44371 2.79938 26 - -
3506 1.38629 1.38629 1.38629 1.38629
3507 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3508 27 2.92285 3.55196 0.12115 3.45295 27 - -
3509 1.38629 1.38629 1.38629 1.38629
3510 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3511 28 3.05326 2.57263 3.10276 0.18448 28 - -
3512 1.38629 1.38629 1.38629 1.38629
3513 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3514 29 3.39256 0.13515 3.44371 2.79938 29 - -
3515 1.38629 1.38629 1.38629 1.38629
3516 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3517 30 3.05326 2.57263 3.10276 0.18448 30 - -
3518 1.38629 1.38629 1.38629 1.38629
3519 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3520 31 2.92285 3.55196 0.12115 3.45295 31 - -
3521 1.38629 1.38629 1.38629 1.38629
3522 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3523 32 3.05326 2.57263 3.10276 0.18448 32 - -
3524 1.38629 1.38629 1.38629 1.38629
3525 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3526 33 3.39256 0.13515 3.44371 2.79938 33 - -
3527 1.38629 1.38629 1.38629 1.38629
3528 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3529 34 3.05326 2.57263 3.10276 0.18448 34 - -
3530 1.38629 1.38629 1.38629 1.38629
3531 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3532 35 2.92285 3.55196 0.12115 3.45295 35 - -
3533 1.38629 1.38629 1.38629 1.38629
3534 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3535 36 0.14663 3.34511 2.77903 3.24347 36 - -
3536 1.38629 1.38629 1.38629 1.38629
3537 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3538 37 2.92285 3.55196 0.12115 3.45295 37 - -
3539 1.38629 1.38629 1.38629 1.38629
3540 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3541 38 3.39256 0.13515 3.44371 2.79938 38 - -
3542 1.38629 1.38629 1.38629 1.38629
3543 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3544 39 2.92285 3.55196 0.12115 3.45295 39 - -
3545 1.38629 1.38629 1.38629 1.38629
3546 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3547 40 3.05326 2.57263 3.10276 0.18448 40 - -
3548 1.38629 1.38629 1.38629 1.38629
3549 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3550 41 3.05326 2.57263 3.10276 0.18448 41 - -
3551 1.38629 1.38629 1.38629 1.38629
3552 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3553 42 3.39256 0.13515 3.44371 2.79938 42 - -
3554 1.38629 1.38629 1.38629 1.38629
3555 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3556 43 2.92285 3.55196 0.12115 3.45295 43 - -
3557 1.38629 1.38629 1.38629 1.38629
3558 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3559 44 3.05326 2.57263 3.10276 0.18448 44 - -
3560 1.38629 1.38629 1.38629 1.38629
3561 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
3562 45 3.05326 2.57263 3.10276 0.18448 45 - -
3563 1.38629 1.38629 1.38629 1.38629
3564 0.01899 3.97309 * 1.46634 0.26236 0.00000 *
3565 //
3566 HMMER3/b [3.0 | March 2010]
3567 NAME 3_End_Metazoa_58S_end_fortyeightf_long
3568 LENG 45
3569 ALPH DNA
3570 RF no
3571 CS no
3572 MAP yes
3573 DATE Sat Feb 25 14:50:56 2012
3574 NSEQ 11
3575 EFFN 3.316650
3576 CKSUM 2204535920
3577 STATS LOCAL MSV -8.0261 0.71932
3578 STATS LOCAL VITERBI -7.9269 0.71932
3579 STATS LOCAL FORWARD -4.2355 0.71932
3580 HMM A C G T
3581 m->m m->i m->d i->m i->i d->m d->d
3582 COMPO 1.86940 1.25480 1.19492 1.35510
3583 1.38629 1.38629 1.38629 1.38629
3584 0.03693 4.01036 4.01036 1.46634 0.26236 0.00000 *
3585 1 2.94618 3.58579 0.11737 3.49026 1 - -
3586 1.38629 1.38629 1.38629 1.38629
3587 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3588 2 2.94618 3.58579 0.11737 3.49026 2 - -
3589 1.38629 1.38629 1.38629 1.38629
3590 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3591 3 3.43088 0.13047 3.48043 2.82738 3 - -
3592 1.38629 1.38629 1.38629 1.38629
3593 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3594 4 2.94618 3.58579 0.11737 3.49026 4 - -
3595 1.38629 1.38629 1.38629 1.38629
3596 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3597 5 3.43088 0.13047 3.48043 2.82738 5 - -
3598 1.38629 1.38629 1.38629 1.38629
3599 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3600 6 3.08666 2.59390 3.13489 0.17899 6 - -
3601 1.38629 1.38629 1.38629 1.38629
3602 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3603 7 3.43088 0.13047 3.48043 2.82738 7 - -
3604 1.38629 1.38629 1.38629 1.38629
3605 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3606 8 3.08666 2.59390 3.13489 0.17899 8 - -
3607 1.38629 1.38629 1.38629 1.38629
3608 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3609 9 3.43088 0.13047 3.48043 2.82738 9 - -
3610 1.38629 1.38629 1.38629 1.38629
3611 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3612 10 2.94618 3.58579 0.11737 3.49026 10 - -
3613 1.38629 1.38629 1.38629 1.38629
3614 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3615 11 2.94618 3.58579 0.11737 3.49026 11 - -
3616 1.38629 1.38629 1.38629 1.38629
3617 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3618 12 3.08666 2.59390 3.13489 0.17899 12 - -
3619 1.38629 1.38629 1.38629 1.38629
3620 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3621 13 3.08666 2.59390 3.13489 0.17899 13 - -
3622 1.38629 1.38629 1.38629 1.38629
3623 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3624 14 3.08666 2.59390 3.13489 0.17899 14 - -
3625 1.38629 1.38629 1.38629 1.38629
3626 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3627 15 3.43088 0.13047 3.48043 2.82738 15 - -
3628 1.38629 1.38629 1.38629 1.38629
3629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3630 16 0.14215 3.37833 2.80067 3.27981 16 - -
3631 1.38629 1.38629 1.38629 1.38629
3632 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3633 17 3.43088 0.13047 3.48043 2.82738 17 - -
3634 1.38629 1.38629 1.38629 1.38629
3635 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3636 18 3.43088 0.13047 3.48043 2.82738 18 - -
3637 1.38629 1.38629 1.38629 1.38629
3638 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3639 19 2.94618 3.58579 0.11737 3.49026 19 - -
3640 1.38629 1.38629 1.38629 1.38629
3641 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3642 20 2.94618 3.58579 0.11737 3.49026 20 - -
3643 1.38629 1.38629 1.38629 1.38629
3644 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3645 21 2.94618 3.58579 0.11737 3.49026 21 - -
3646 1.38629 1.38629 1.38629 1.38629
3647 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3648 22 0.14215 3.37833 2.80067 3.27981 22 - -
3649 1.38629 1.38629 1.38629 1.38629
3650 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3651 23 2.94618 3.58579 0.11737 3.49026 23 - -
3652 1.38629 1.38629 1.38629 1.38629
3653 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3654 24 3.43088 0.13047 3.48043 2.82738 24 - -
3655 1.38629 1.38629 1.38629 1.38629
3656 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3657 25 0.14215 3.37833 2.80067 3.27981 25 - -
3658 1.38629 1.38629 1.38629 1.38629
3659 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3660 26 3.43088 0.13047 3.48043 2.82738 26 - -
3661 1.38629 1.38629 1.38629 1.38629
3662 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3663 27 2.94618 3.58579 0.11737 3.49026 27 - -
3664 1.38629 1.38629 1.38629 1.38629
3665 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3666 28 3.08666 2.59390 3.13489 0.17899 28 - -
3667 1.38629 1.38629 1.38629 1.38629
3668 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3669 29 3.43088 0.13047 3.48043 2.82738 29 - -
3670 1.38629 1.38629 1.38629 1.38629
3671 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3672 30 3.08666 2.59390 3.13489 0.17899 30 - -
3673 1.38629 1.38629 1.38629 1.38629
3674 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3675 31 2.94618 3.58579 0.11737 3.49026 31 - -
3676 1.38629 1.38629 1.38629 1.38629
3677 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3678 32 3.08666 2.59390 3.13489 0.17899 32 - -
3679 1.38629 1.38629 1.38629 1.38629
3680 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3681 33 3.43088 0.13047 3.48043 2.82738 33 - -
3682 1.38629 1.38629 1.38629 1.38629
3683 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3684 34 3.08666 2.59390 3.13489 0.17899 34 - -
3685 1.38629 1.38629 1.38629 1.38629
3686 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3687 35 2.94618 3.58579 0.11737 3.49026 35 - -
3688 1.38629 1.38629 1.38629 1.38629
3689 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3690 36 0.14215 3.37833 2.80067 3.27981 36 - -
3691 1.38629 1.38629 1.38629 1.38629
3692 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3693 37 2.94618 3.58579 0.11737 3.49026 37 - -
3694 1.38629 1.38629 1.38629 1.38629
3695 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3696 38 3.43088 0.13047 3.48043 2.82738 38 - -
3697 1.38629 1.38629 1.38629 1.38629
3698 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3699 39 0.14215 3.37833 2.80067 3.27981 39 - -
3700 1.38629 1.38629 1.38629 1.38629
3701 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3702 40 3.08666 2.59390 3.13489 0.17899 40 - -
3703 1.38629 1.38629 1.38629 1.38629
3704 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3705 41 3.08666 2.59390 3.13489 0.17899 41 - -
3706 1.38629 1.38629 1.38629 1.38629
3707 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3708 42 3.43088 0.13047 3.48043 2.82738 42 - -
3709 1.38629 1.38629 1.38629 1.38629
3710 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3711 43 2.94618 3.58579 0.11737 3.49026 43 - -
3712 1.38629 1.38629 1.38629 1.38629
3713 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3714 44 0.57713 2.32692 2.24167 1.44981 44 - -
3715 1.38629 1.38629 1.38629 1.38629
3716 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
3717 45 3.08666 2.59390 3.13489 0.17899 45 - -
3718 1.38629 1.38629 1.38629 1.38629
3719 0.01863 3.99206 * 1.46634 0.26236 0.00000 *
3720 //
3721 HMMER3/b [3.0 | March 2010]
3722 NAME 3_End_Metazoa_58S_end_fortyfive_long
3723 LENG 45
3724 ALPH DNA
3725 RF no
3726 CS no
3727 MAP yes
3728 DATE Sat Feb 25 14:49:50 2012
3729 NSEQ 4
3730 EFFN 3.167969
3731 CKSUM 3104217627
3732 STATS LOCAL MSV -8.1787 0.71934
3733 STATS LOCAL VITERBI -7.9801 0.71934
3734 STATS LOCAL FORWARD -3.9468 0.71934
3735 HMM A C G T
3736 m->m m->i m->d i->m i->i d->m d->d
3737 COMPO 2.19556 1.04296 1.09808 1.59562
3738 1.38629 1.38629 1.38629 1.38629
3739 0.03797 3.98303 3.98303 1.46634 0.26236 0.00000 *
3740 1 3.37444 0.13743 3.42635 2.78609 1 - -
3741 1.38629 1.38629 1.38629 1.38629
3742 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3743 2 2.91173 3.53592 0.12299 3.43528 2 - -
3744 1.38629 1.38629 1.38629 1.38629
3745 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3746 3 3.37444 0.13743 3.42635 2.78609 3 - -
3747 1.38629 1.38629 1.38629 1.38629
3748 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3749 4 2.56050 1.56301 2.62680 0.44485 4 - -
3750 1.38629 1.38629 1.38629 1.38629
3751 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3752 5 3.37444 0.13743 3.42635 2.78609 5 - -
3753 1.38629 1.38629 1.38629 1.38629
3754 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3755 6 3.37444 0.13743 3.42635 2.78609 6 - -
3756 1.38629 1.38629 1.38629 1.38629
3757 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3758 7 3.37444 0.13743 3.42635 2.78609 7 - -
3759 1.38629 1.38629 1.38629 1.38629
3760 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3761 8 2.91173 3.53592 0.12299 3.43528 8 - -
3762 1.38629 1.38629 1.38629 1.38629
3763 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3764 9 2.91173 3.53592 0.12299 3.43528 9 - -
3765 1.38629 1.38629 1.38629 1.38629
3766 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3767 10 2.91173 3.53592 0.12299 3.43528 10 - -
3768 1.38629 1.38629 1.38629 1.38629
3769 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3770 11 2.91173 3.53592 0.12299 3.43528 11 - -
3771 1.38629 1.38629 1.38629 1.38629
3772 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3773 12 3.03758 2.56263 3.08768 0.18713 12 - -
3774 1.38629 1.38629 1.38629 1.38629
3775 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3776 13 3.37444 0.13743 3.42635 2.78609 13 - -
3777 1.38629 1.38629 1.38629 1.38629
3778 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3779 14 3.03758 2.56263 3.08768 0.18713 14 - -
3780 1.38629 1.38629 1.38629 1.38629
3781 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3782 15 3.37444 0.13743 3.42635 2.78609 15 - -
3783 1.38629 1.38629 1.38629 1.38629
3784 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3785 16 3.37444 0.13743 3.42635 2.78609 16 - -
3786 1.38629 1.38629 1.38629 1.38629
3787 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3788 17 3.03758 2.56263 3.08768 0.18713 17 - -
3789 1.38629 1.38629 1.38629 1.38629
3790 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3791 18 3.37444 0.13743 3.42635 2.78609 18 - -
3792 1.38629 1.38629 1.38629 1.38629
3793 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3794 19 2.91173 3.53592 0.12299 3.43528 19 - -
3795 1.38629 1.38629 1.38629 1.38629
3796 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3797 20 2.91173 3.53592 0.12299 3.43528 20 - -
3798 1.38629 1.38629 1.38629 1.38629
3799 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3800 21 2.91173 3.53592 0.12299 3.43528 21 - -
3801 1.38629 1.38629 1.38629 1.38629
3802 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3803 22 0.14880 3.32943 2.76878 3.22633 22 - -
3804 1.38629 1.38629 1.38629 1.38629
3805 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3806 23 2.91173 3.53592 0.12299 3.43528 23 - -
3807 1.38629 1.38629 1.38629 1.38629
3808 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3809 24 3.37444 0.13743 3.42635 2.78609 24 - -
3810 1.38629 1.38629 1.38629 1.38629
3811 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3812 25 0.14880 3.32943 2.76878 3.22633 25 - -
3813 1.38629 1.38629 1.38629 1.38629
3814 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3815 26 2.91173 3.53592 0.12299 3.43528 26 - -
3816 1.38629 1.38629 1.38629 1.38629
3817 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3818 27 2.91173 3.53592 0.12299 3.43528 27 - -
3819 1.38629 1.38629 1.38629 1.38629
3820 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3821 28 3.03758 2.56263 3.08768 0.18713 28 - -
3822 1.38629 1.38629 1.38629 1.38629
3823 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3824 29 3.37444 0.13743 3.42635 2.78609 29 - -
3825 1.38629 1.38629 1.38629 1.38629
3826 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3827 30 3.03758 2.56263 3.08768 0.18713 30 - -
3828 1.38629 1.38629 1.38629 1.38629
3829 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3830 31 2.91173 3.53592 0.12299 3.43528 31 - -
3831 1.38629 1.38629 1.38629 1.38629
3832 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3833 32 3.03758 2.56263 3.08768 0.18713 32 - -
3834 1.38629 1.38629 1.38629 1.38629
3835 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3836 33 3.37444 0.13743 3.42635 2.78609 33 - -
3837 1.38629 1.38629 1.38629 1.38629
3838 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3839 34 3.37444 0.13743 3.42635 2.78609 34 - -
3840 1.38629 1.38629 1.38629 1.38629
3841 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3842 35 2.91173 3.53592 0.12299 3.43528 35 - -
3843 1.38629 1.38629 1.38629 1.38629
3844 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3845 36 0.14880 3.32943 2.76878 3.22633 36 - -
3846 1.38629 1.38629 1.38629 1.38629
3847 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3848 37 2.91173 3.53592 0.12299 3.43528 37 - -
3849 1.38629 1.38629 1.38629 1.38629
3850 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3851 38 3.37444 0.13743 3.42635 2.78609 38 - -
3852 1.38629 1.38629 1.38629 1.38629
3853 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3854 39 2.91173 3.53592 0.12299 3.43528 39 - -
3855 1.38629 1.38629 1.38629 1.38629
3856 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3857 40 3.03758 2.56263 3.08768 0.18713 40 - -
3858 1.38629 1.38629 1.38629 1.38629
3859 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3860 41 3.37444 0.13743 3.42635 2.78609 41 - -
3861 1.38629 1.38629 1.38629 1.38629
3862 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3863 42 3.03758 2.56263 3.08768 0.18713 42 - -
3864 1.38629 1.38629 1.38629 1.38629
3865 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3866 43 2.91173 3.53592 0.12299 3.43528 43 - -
3867 1.38629 1.38629 1.38629 1.38629
3868 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3869 44 3.37444 0.13743 3.42635 2.78609 44 - -
3870 1.38629 1.38629 1.38629 1.38629
3871 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
3872 45 3.37444 0.13743 3.42635 2.78609 45 - -
3873 1.38629 1.38629 1.38629 1.38629
3874 0.01917 3.96423 * 1.46634 0.26236 0.00000 *
3875 //
3876 HMMER3/b [3.0 | March 2010]
3877 NAME 3_End_Metazoa_58S_end_fortyfour_long
3878 LENG 45
3879 ALPH DNA
3880 RF no
3881 CS no
3882 MAP yes
3883 DATE Sat Feb 25 14:49:38 2012
3884 NSEQ 6
3885 EFFN 3.161133
3886 CKSUM 3736386509
3887 STATS LOCAL MSV -7.9213 0.71932
3888 STATS LOCAL VITERBI -7.8583 0.71932
3889 STATS LOCAL FORWARD -3.8470 0.71932
3890 HMM A C G T
3891 m->m m->i m->d i->m i->i d->m d->d
3892 COMPO 1.92961 1.26295 1.09548 1.43717
3893 1.38629 1.38629 1.38629 1.38629
3894 0.03802 3.98176 3.98176 1.46634 0.26236 0.00000 *
3895 1 3.37178 0.13777 3.42379 2.78413 1 - -
3896 1.38629 1.38629 1.38629 1.38629
3897 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3898 2 3.03528 2.56116 3.08546 0.18752 2 - -
3899 1.38629 1.38629 1.38629 1.38629
3900 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3901 3 3.37178 0.13777 3.42379 2.78413 3 - -
3902 1.38629 1.38629 1.38629 1.38629
3903 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3904 4 3.03528 2.56116 3.08546 0.18752 4 - -
3905 1.38629 1.38629 1.38629 1.38629
3906 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3907 5 3.37178 0.13777 3.42379 2.78413 5 - -
3908 1.38629 1.38629 1.38629 1.38629
3909 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3910 6 2.91009 3.53355 0.12327 3.43268 6 - -
3911 1.38629 1.38629 1.38629 1.38629
3912 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3913 7 2.91009 3.53355 0.12327 3.43268 7 - -
3914 1.38629 1.38629 1.38629 1.38629
3915 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3916 8 2.91009 3.53355 0.12327 3.43268 8 - -
3917 1.38629 1.38629 1.38629 1.38629
3918 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3919 9 3.37178 0.13777 3.42379 2.78413 9 - -
3920 1.38629 1.38629 1.38629 1.38629
3921 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3922 10 3.37178 0.13777 3.42379 2.78413 10 - -
3923 1.38629 1.38629 1.38629 1.38629
3924 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3925 11 3.37178 0.13777 3.42379 2.78413 11 - -
3926 1.38629 1.38629 1.38629 1.38629
3927 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3928 12 3.03528 2.56116 3.08546 0.18752 12 - -
3929 1.38629 1.38629 1.38629 1.38629
3930 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3931 13 2.91009 3.53355 0.12327 3.43268 13 - -
3932 1.38629 1.38629 1.38629 1.38629
3933 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3934 14 2.91009 3.53355 0.12327 3.43268 14 - -
3935 1.38629 1.38629 1.38629 1.38629
3936 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3937 15 3.03528 2.56116 3.08546 0.18752 15 - -
3938 1.38629 1.38629 1.38629 1.38629
3939 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3940 16 3.37178 0.13777 3.42379 2.78413 16 - -
3941 1.38629 1.38629 1.38629 1.38629
3942 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3943 17 3.37178 0.13777 3.42379 2.78413 17 - -
3944 1.38629 1.38629 1.38629 1.38629
3945 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3946 18 3.37178 0.13777 3.42379 2.78413 18 - -
3947 1.38629 1.38629 1.38629 1.38629
3948 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3949 19 2.91009 3.53355 0.12327 3.43268 19 - -
3950 1.38629 1.38629 1.38629 1.38629
3951 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3952 20 2.91009 3.53355 0.12327 3.43268 20 - -
3953 1.38629 1.38629 1.38629 1.38629
3954 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3955 21 2.91009 3.53355 0.12327 3.43268 21 - -
3956 1.38629 1.38629 1.38629 1.38629
3957 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3958 22 0.14912 3.32712 2.76727 3.22381 22 - -
3959 1.38629 1.38629 1.38629 1.38629
3960 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3961 23 2.91009 3.53355 0.12327 3.43268 23 - -
3962 1.38629 1.38629 1.38629 1.38629
3963 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3964 24 3.37178 0.13777 3.42379 2.78413 24 - -
3965 1.38629 1.38629 1.38629 1.38629
3966 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3967 25 0.14912 3.32712 2.76727 3.22381 25 - -
3968 1.38629 1.38629 1.38629 1.38629
3969 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3970 26 3.03528 2.56116 3.08546 0.18752 26 - -
3971 1.38629 1.38629 1.38629 1.38629
3972 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3973 27 2.91009 3.53355 0.12327 3.43268 27 - -
3974 1.38629 1.38629 1.38629 1.38629
3975 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3976 28 3.03528 2.56116 3.08546 0.18752 28 - -
3977 1.38629 1.38629 1.38629 1.38629
3978 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3979 29 3.37178 0.13777 3.42379 2.78413 29 - -
3980 1.38629 1.38629 1.38629 1.38629
3981 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3982 30 3.03528 2.56116 3.08546 0.18752 30 - -
3983 1.38629 1.38629 1.38629 1.38629
3984 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3985 31 2.91009 3.53355 0.12327 3.43268 31 - -
3986 1.38629 1.38629 1.38629 1.38629
3987 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3988 32 3.03528 2.56116 3.08546 0.18752 32 - -
3989 1.38629 1.38629 1.38629 1.38629
3990 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3991 33 3.37178 0.13777 3.42379 2.78413 33 - -
3992 1.38629 1.38629 1.38629 1.38629
3993 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3994 34 3.03528 2.56116 3.08546 0.18752 34 - -
3995 1.38629 1.38629 1.38629 1.38629
3996 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
3997 35 2.91009 3.53355 0.12327 3.43268 35 - -
3998 1.38629 1.38629 1.38629 1.38629
3999 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
4000 36 0.14912 3.32712 2.76727 3.22381 36 - -
4001 1.38629 1.38629 1.38629 1.38629
4002 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
4003 37 2.91009 3.53355 0.12327 3.43268 37 - -
4004 1.38629 1.38629 1.38629 1.38629
4005 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
4006 38 2.91009 3.53355 0.12327 3.43268 38 - -
4007 1.38629 1.38629 1.38629 1.38629
4008 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
4009 39 2.91009 3.53355 0.12327 3.43268 39 - -
4010 1.38629 1.38629 1.38629 1.38629
4011 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
4012 40 3.03528 2.56116 3.08546 0.18752 40 - -
4013 1.38629 1.38629 1.38629 1.38629
4014 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
4015 41 3.37178 0.13777 3.42379 2.78413 41 - -
4016 1.38629 1.38629 1.38629 1.38629
4017 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
4018 42 2.91009 3.53355 0.12327 3.43268 42 - -
4019 1.38629 1.38629 1.38629 1.38629
4020 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
4021 43 0.14912 3.32712 2.76727 3.22381 43 - -
4022 1.38629 1.38629 1.38629 1.38629
4023 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
4024 44 0.14912 3.32712 2.76727 3.22381 44 - -
4025 1.38629 1.38629 1.38629 1.38629
4026 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547
4027 45 3.03528 2.56116 3.08546 0.18752 45 - -
4028 1.38629 1.38629 1.38629 1.38629
4029 0.01919 3.96293 * 1.46634 0.26236 0.00000 *
4030 //
4031 HMMER3/b [3.0 | March 2010]
4032 NAME 3_End_Metazoa_58S_end_fortynine_long
4033 LENG 45
4034 ALPH DNA
4035 RF no
4036 CS no
4037 MAP yes
4038 DATE Sat Feb 25 14:51:08 2012
4039 NSEQ 15
4040 EFFN 3.211670
4041 CKSUM 3750062705
4042 STATS LOCAL MSV -8.2153 0.71932
4043 STATS LOCAL VITERBI -7.8337 0.71932
4044 STATS LOCAL FORWARD -4.0703 0.71932
4045 HMM A C G T
4046 m->m m->i m->d i->m i->i d->m d->d
4047 COMPO 2.05372 1.19574 1.09436 1.45026
4048 1.38629 1.38629 1.38629 1.38629
4049 0.03766 3.99114 3.99114 1.46634 0.26236 0.00000 *
4050 1 3.39134 0.13530 3.44255 2.79849 1 - -
4051 1.38629 1.38629 1.38629 1.38629
4052 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4053 2 2.92210 3.55089 0.12127 3.45176 2 - -
4054 1.38629 1.38629 1.38629 1.38629
4055 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4056 3 3.39134 0.13530 3.44255 2.79849 3 - -
4057 1.38629 1.38629 1.38629 1.38629
4058 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4059 4 3.39134 0.13530 3.44255 2.79849 4 - -
4060 1.38629 1.38629 1.38629 1.38629
4061 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4062 5 3.39134 0.13530 3.44255 2.79849 5 - -
4063 1.38629 1.38629 1.38629 1.38629
4064 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4065 6 3.05221 2.57196 3.10175 0.18466 6 - -
4066 1.38629 1.38629 1.38629 1.38629
4067 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4068 7 3.39134 0.13530 3.44255 2.79849 7 - -
4069 1.38629 1.38629 1.38629 1.38629
4070 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4071 8 2.92210 3.55089 0.12127 3.45176 8 - -
4072 1.38629 1.38629 1.38629 1.38629
4073 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4074 9 2.92210 3.55089 0.12127 3.45176 9 - -
4075 1.38629 1.38629 1.38629 1.38629
4076 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4077 10 3.05221 2.57196 3.10175 0.18466 10 - -
4078 1.38629 1.38629 1.38629 1.38629
4079 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4080 11 3.05221 2.57196 3.10175 0.18466 11 - -
4081 1.38629 1.38629 1.38629 1.38629
4082 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4083 12 2.64062 1.70487 2.70448 0.38569 12 - -
4084 1.38629 1.38629 1.38629 1.38629
4085 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4086 13 2.92210 3.55089 0.12127 3.45176 13 - -
4087 1.38629 1.38629 1.38629 1.38629
4088 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4089 14 0.14677 3.34406 2.77834 3.24231 14 - -
4090 1.38629 1.38629 1.38629 1.38629
4091 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4092 15 0.14677 3.34406 2.77834 3.24231 15 - -
4093 1.38629 1.38629 1.38629 1.38629
4094 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4095 16 2.92210 3.55089 0.12127 3.45176 16 - -
4096 1.38629 1.38629 1.38629 1.38629
4097 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4098 17 3.39134 0.13530 3.44255 2.79849 17 - -
4099 1.38629 1.38629 1.38629 1.38629
4100 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4101 18 3.39134 0.13530 3.44255 2.79849 18 - -
4102 1.38629 1.38629 1.38629 1.38629
4103 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4104 19 2.92210 3.55089 0.12127 3.45176 19 - -
4105 1.38629 1.38629 1.38629 1.38629
4106 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4107 20 2.92210 3.55089 0.12127 3.45176 20 - -
4108 1.38629 1.38629 1.38629 1.38629
4109 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4110 21 2.92210 3.55089 0.12127 3.45176 21 - -
4111 1.38629 1.38629 1.38629 1.38629
4112 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4113 22 2.92210 3.55089 0.12127 3.45176 22 - -
4114 1.38629 1.38629 1.38629 1.38629
4115 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4116 23 2.92210 3.55089 0.12127 3.45176 23 - -
4117 1.38629 1.38629 1.38629 1.38629
4118 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4119 24 3.39134 0.13530 3.44255 2.79849 24 - -
4120 1.38629 1.38629 1.38629 1.38629
4121 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4122 25 0.14677 3.34406 2.77834 3.24231 25 - -
4123 1.38629 1.38629 1.38629 1.38629
4124 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4125 26 3.39134 0.13530 3.44255 2.79849 26 - -
4126 1.38629 1.38629 1.38629 1.38629
4127 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4128 27 2.92210 3.55089 0.12127 3.45176 27 - -
4129 1.38629 1.38629 1.38629 1.38629
4130 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4131 28 3.05221 2.57196 3.10175 0.18466 28 - -
4132 1.38629 1.38629 1.38629 1.38629
4133 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4134 29 3.39134 0.13530 3.44255 2.79849 29 - -
4135 1.38629 1.38629 1.38629 1.38629
4136 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4137 30 3.05221 2.57196 3.10175 0.18466 30 - -
4138 1.38629 1.38629 1.38629 1.38629
4139 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4140 31 2.92210 3.55089 0.12127 3.45176 31 - -
4141 1.38629 1.38629 1.38629 1.38629
4142 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4143 32 3.05221 2.57196 3.10175 0.18466 32 - -
4144 1.38629 1.38629 1.38629 1.38629
4145 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4146 33 3.39134 0.13530 3.44255 2.79849 33 - -
4147 1.38629 1.38629 1.38629 1.38629
4148 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4149 34 3.05221 2.57196 3.10175 0.18466 34 - -
4150 1.38629 1.38629 1.38629 1.38629
4151 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4152 35 2.92210 3.55089 0.12127 3.45176 35 - -
4153 1.38629 1.38629 1.38629 1.38629
4154 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4155 36 0.14677 3.34406 2.77834 3.24231 36 - -
4156 1.38629 1.38629 1.38629 1.38629
4157 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4158 37 2.92210 3.55089 0.12127 3.45176 37 - -
4159 1.38629 1.38629 1.38629 1.38629
4160 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4161 38 3.39134 0.13530 3.44255 2.79849 38 - -
4162 1.38629 1.38629 1.38629 1.38629
4163 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4164 39 2.92210 3.55089 0.12127 3.45176 39 - -
4165 1.38629 1.38629 1.38629 1.38629
4166 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4167 40 3.05221 2.57196 3.10175 0.18466 40 - -
4168 1.38629 1.38629 1.38629 1.38629
4169 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4170 41 3.39134 0.13530 3.44255 2.79849 41 - -
4171 1.38629 1.38629 1.38629 1.38629
4172 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4173 42 3.39134 0.13530 3.44255 2.79849 42 - -
4174 1.38629 1.38629 1.38629 1.38629
4175 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4176 43 2.92210 3.55089 0.12127 3.45176 43 - -
4177 1.38629 1.38629 1.38629 1.38629
4178 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4179 44 3.05221 2.57196 3.10175 0.18466 44 - -
4180 1.38629 1.38629 1.38629 1.38629
4181 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547
4182 45 3.05221 2.57196 3.10175 0.18466 45 - -
4183 1.38629 1.38629 1.38629 1.38629
4184 0.01901 3.97249 * 1.46634 0.26236 0.00000 *
4185 //
4186 HMMER3/b [3.0 | March 2010]
4187 NAME 3_End_Metazoa_58S_end_fortyonea_long
4188 LENG 45
4189 ALPH DNA
4190 RF no
4191 CS no
4192 MAP yes
4193 DATE Sat Feb 25 14:45:44 2012
4194 NSEQ 2
4195 EFFN 2.000000
4196 CKSUM 3351881953
4197 STATS LOCAL MSV -7.4836 0.72751
4198 STATS LOCAL VITERBI -8.3118 0.72751
4199 STATS LOCAL FORWARD -3.4363 0.72751
4200 HMM A C G T
4201 m->m m->i m->d i->m i->i d->m d->d
4202 COMPO 1.92284 1.23828 1.12440 1.43096
4203 1.38629 1.38629 1.38629 1.38629
4204 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
4205 1 2.81865 0.23582 2.88868 2.35662 1 - -
4206 1.38629 1.38629 1.38629 1.38629
4207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4208 2 2.53331 3.02441 0.20344 2.88069 2 - -
4209 1.38629 1.38629 1.38629 1.38629
4210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4211 3 2.53331 3.02441 0.20344 2.88069 3 - -
4212 1.38629 1.38629 1.38629 1.38629
4213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4214 4 2.81865 0.23582 2.88868 2.35662 4 - -
4215 1.38629 1.38629 1.38629 1.38629
4216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4217 5 2.81865 0.23582 2.88868 2.35662 5 - -
4218 1.38629 1.38629 1.38629 1.38629
4219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4220 6 2.53331 3.02441 0.20344 2.88069 6 - -
4221 1.38629 1.38629 1.38629 1.38629
4222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4223 7 0.23862 2.84929 2.43386 2.70756 7 - -
4224 1.38629 1.38629 1.38629 1.38629
4225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4226 8 2.53331 3.02441 0.20344 2.88069 8 - -
4227 1.38629 1.38629 1.38629 1.38629
4228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4229 9 2.53331 3.02441 0.20344 2.88069 9 - -
4230 1.38629 1.38629 1.38629 1.38629
4231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4232 10 2.57915 2.25909 2.64442 0.28946 10 - -
4233 1.38629 1.38629 1.38629 1.38629
4234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4235 11 2.57915 2.25909 2.64442 0.28946 11 - -
4236 1.38629 1.38629 1.38629 1.38629
4237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4238 12 2.57915 2.25909 2.64442 0.28946 12 - -
4239 1.38629 1.38629 1.38629 1.38629
4240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4241 13 2.81865 0.23582 2.88868 2.35662 13 - -
4242 1.38629 1.38629 1.38629 1.38629
4243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4244 14 2.57915 2.25909 2.64442 0.28946 14 - -
4245 1.38629 1.38629 1.38629 1.38629
4246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4247 15 0.23862 2.84929 2.43386 2.70756 15 - -
4248 1.38629 1.38629 1.38629 1.38629
4249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4250 16 2.53331 3.02441 0.20344 2.88069 16 - -
4251 1.38629 1.38629 1.38629 1.38629
4252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4253 17 2.81865 0.23582 2.88868 2.35662 17 - -
4254 1.38629 1.38629 1.38629 1.38629
4255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4256 18 2.81865 0.23582 2.88868 2.35662 18 - -
4257 1.38629 1.38629 1.38629 1.38629
4258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4259 19 2.57915 2.25909 2.64442 0.28946 19 - -
4260 1.38629 1.38629 1.38629 1.38629
4261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4262 20 2.81865 0.23582 2.88868 2.35662 20 - -
4263 1.38629 1.38629 1.38629 1.38629
4264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4265 21 2.53331 3.02441 0.20344 2.88069 21 - -
4266 1.38629 1.38629 1.38629 1.38629
4267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4268 22 2.53331 3.02441 0.20344 2.88069 22 - -
4269 1.38629 1.38629 1.38629 1.38629
4270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4271 23 2.81865 0.23582 2.88868 2.35662 23 - -
4272 1.38629 1.38629 1.38629 1.38629
4273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4274 24 2.81865 0.23582 2.88868 2.35662 24 - -
4275 1.38629 1.38629 1.38629 1.38629
4276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4277 25 0.23862 2.84929 2.43386 2.70756 25 - -
4278 1.38629 1.38629 1.38629 1.38629
4279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4280 26 2.81865 0.23582 2.88868 2.35662 26 - -
4281 1.38629 1.38629 1.38629 1.38629
4282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4283 27 2.53331 3.02441 0.20344 2.88069 27 - -
4284 1.38629 1.38629 1.38629 1.38629
4285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4286 28 2.57915 2.25909 2.64442 0.28946 28 - -
4287 1.38629 1.38629 1.38629 1.38629
4288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4289 29 2.81865 0.23582 2.88868 2.35662 29 - -
4290 1.38629 1.38629 1.38629 1.38629
4291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4292 30 2.57915 2.25909 2.64442 0.28946 30 - -
4293 1.38629 1.38629 1.38629 1.38629
4294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4295 31 2.53331 3.02441 0.20344 2.88069 31 - -
4296 1.38629 1.38629 1.38629 1.38629
4297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4298 32 2.57915 2.25909 2.64442 0.28946 32 - -
4299 1.38629 1.38629 1.38629 1.38629
4300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4301 33 2.81865 0.23582 2.88868 2.35662 33 - -
4302 1.38629 1.38629 1.38629 1.38629
4303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4304 34 2.57915 2.25909 2.64442 0.28946 34 - -
4305 1.38629 1.38629 1.38629 1.38629
4306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4307 35 2.53331 3.02441 0.20344 2.88069 35 - -
4308 1.38629 1.38629 1.38629 1.38629
4309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4310 36 0.23862 2.84929 2.43386 2.70756 36 - -
4311 1.38629 1.38629 1.38629 1.38629
4312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4313 37 2.53331 3.02441 0.20344 2.88069 37 - -
4314 1.38629 1.38629 1.38629 1.38629
4315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4316 38 2.53331 3.02441 0.20344 2.88069 38 - -
4317 1.38629 1.38629 1.38629 1.38629
4318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4319 39 2.53331 3.02441 0.20344 2.88069 39 - -
4320 1.38629 1.38629 1.38629 1.38629
4321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4322 40 2.57915 2.25909 2.64442 0.28946 40 - -
4323 1.38629 1.38629 1.38629 1.38629
4324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4325 41 2.81865 0.23582 2.88868 2.35662 41 - -
4326 1.38629 1.38629 1.38629 1.38629
4327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4328 42 2.53331 3.02441 0.20344 2.88069 42 - -
4329 1.38629 1.38629 1.38629 1.38629
4330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4331 43 2.53331 3.02441 0.20344 2.88069 43 - -
4332 1.38629 1.38629 1.38629 1.38629
4333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4334 44 2.81865 0.23582 2.88868 2.35662 44 - -
4335 1.38629 1.38629 1.38629 1.38629
4336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4337 45 2.57915 2.25909 2.64442 0.28946 45 - -
4338 1.38629 1.38629 1.38629 1.38629
4339 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
4340 //
4341 HMMER3/b [3.0 | March 2010]
4342 NAME 3_End_Metazoa_58S_end_fortyoneb_long
4343 LENG 45
4344 ALPH DNA
4345 RF no
4346 CS no
4347 MAP yes
4348 DATE Sat Feb 25 14:45:56 2012
4349 NSEQ 68
4350 EFFN 3.523682
4351 CKSUM 178105420
4352 STATS LOCAL MSV -7.2532 0.71932
4353 STATS LOCAL VITERBI -7.8642 0.71932
4354 STATS LOCAL FORWARD -3.8274 0.71932
4355 HMM A C G T
4356 m->m m->i m->d i->m i->i d->m d->d
4357 COMPO 2.33793 1.03819 1.08795 1.54895
4358 1.38629 1.38629 1.38629 1.38629
4359 0.03557 4.04720 4.04720 1.46634 0.26236 0.00000 *
4360 1 3.50468 0.12199 3.55105 2.88082 1 - -
4361 1.38629 1.38629 1.38629 1.38629
4362 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4363 2 2.99046 3.65053 0.11052 3.56181 2 - -
4364 1.38629 1.38629 1.38629 1.38629
4365 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4366 3 2.99046 3.65053 0.11052 3.56181 3 - -
4367 1.38629 1.38629 1.38629 1.38629
4368 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4369 4 3.50468 0.12199 3.55105 2.88082 4 - -
4370 1.38629 1.38629 1.38629 1.38629
4371 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4372 5 3.50468 0.12199 3.55105 2.88082 5 - -
4373 1.38629 1.38629 1.38629 1.38629
4374 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4375 6 3.50468 0.12199 3.55105 2.88082 6 - -
4376 1.38629 1.38629 1.38629 1.38629
4377 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4378 7 3.50468 0.12199 3.55105 2.88082 7 - -
4379 1.38629 1.38629 1.38629 1.38629
4380 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4381 8 2.99046 3.65053 0.11052 3.56181 8 - -
4382 1.38629 1.38629 1.38629 1.38629
4383 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4384 9 2.99046 3.65053 0.11052 3.56181 9 - -
4385 1.38629 1.38629 1.38629 1.38629
4386 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4387 10 2.99046 3.65053 0.11052 3.56181 10 - -
4388 1.38629 1.38629 1.38629 1.38629
4389 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4390 11 3.15189 2.63533 3.19760 0.16881 11 - -
4391 1.38629 1.38629 1.38629 1.38629
4392 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4393 12 2.44366 0.84925 2.51567 0.90483 12 - -
4394 1.38629 1.38629 1.38629 1.38629
4395 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4396 13 2.09412 0.42212 2.19206 2.21199 13 - -
4397 1.38629 1.38629 1.38629 1.38629
4398 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4399 14 3.50468 0.12199 3.55105 2.88082 14 - -
4400 1.38629 1.38629 1.38629 1.38629
4401 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4402 15 3.15189 2.63533 3.19760 0.16881 15 - -
4403 1.38629 1.38629 1.38629 1.38629
4404 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4405 16 3.50468 0.12199 3.55105 2.88082 16 - -
4406 1.38629 1.38629 1.38629 1.38629
4407 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4408 17 3.50468 0.12199 3.55105 2.88082 17 - -
4409 1.38629 1.38629 1.38629 1.38629
4410 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4411 18 3.50468 0.12199 3.55105 2.88082 18 - -
4412 1.38629 1.38629 1.38629 1.38629
4413 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4414 19 2.99046 3.65053 0.11052 3.56181 19 - -
4415 1.38629 1.38629 1.38629 1.38629
4416 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4417 20 2.99046 3.65053 0.11052 3.56181 20 - -
4418 1.38629 1.38629 1.38629 1.38629
4419 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4420 21 2.99046 3.65053 0.11052 3.56181 21 - -
4421 1.38629 1.38629 1.38629 1.38629
4422 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4423 22 2.99046 3.65053 0.11052 3.56181 22 - -
4424 1.38629 1.38629 1.38629 1.38629
4425 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4426 23 3.50468 0.12199 3.55105 2.88082 23 - -
4427 1.38629 1.38629 1.38629 1.38629
4428 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4429 24 3.15189 2.63533 3.19760 0.16881 24 - -
4430 1.38629 1.38629 1.38629 1.38629
4431 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4432 25 0.13394 3.44251 2.84220 3.35013 25 - -
4433 1.38629 1.38629 1.38629 1.38629
4434 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4435 26 3.50468 0.12199 3.55105 2.88082 26 - -
4436 1.38629 1.38629 1.38629 1.38629
4437 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4438 27 2.99046 3.65053 0.11052 3.56181 27 - -
4439 1.38629 1.38629 1.38629 1.38629
4440 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4441 28 2.92172 0.23620 2.53930 2.55598 28 - -
4442 1.38629 1.38629 1.38629 1.38629
4443 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4444 29 3.50468 0.12199 3.55105 2.88082 29 - -
4445 1.38629 1.38629 1.38629 1.38629
4446 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4447 30 3.15189 2.63533 3.19760 0.16881 30 - -
4448 1.38629 1.38629 1.38629 1.38629
4449 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4450 31 2.99046 3.65053 0.11052 3.56181 31 - -
4451 1.38629 1.38629 1.38629 1.38629
4452 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4453 32 3.15189 2.63533 3.19760 0.16881 32 - -
4454 1.38629 1.38629 1.38629 1.38629
4455 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4456 33 3.34624 0.15613 3.39785 2.57846 33 - -
4457 1.38629 1.38629 1.38629 1.38629
4458 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4459 34 3.15189 2.63533 3.19760 0.16881 34 - -
4460 1.38629 1.38629 1.38629 1.38629
4461 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4462 35 2.20651 3.22353 0.21643 3.10742 35 - -
4463 1.38629 1.38629 1.38629 1.38629
4464 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4465 36 0.13394 3.44251 2.84220 3.35013 36 - -
4466 1.38629 1.38629 1.38629 1.38629
4467 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4468 37 2.99046 3.65053 0.11052 3.56181 37 - -
4469 1.38629 1.38629 1.38629 1.38629
4470 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4471 38 2.99046 3.65053 0.11052 3.56181 38 - -
4472 1.38629 1.38629 1.38629 1.38629
4473 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4474 39 2.99046 3.65053 0.11052 3.56181 39 - -
4475 1.38629 1.38629 1.38629 1.38629
4476 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4477 40 3.15189 2.63533 3.19760 0.16881 40 - -
4478 1.38629 1.38629 1.38629 1.38629
4479 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4480 41 3.50468 0.12199 3.55105 2.88082 41 - -
4481 1.38629 1.38629 1.38629 1.38629
4482 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4483 42 2.99046 3.65053 0.11052 3.56181 42 - -
4484 1.38629 1.38629 1.38629 1.38629
4485 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4486 43 3.50468 0.12199 3.55105 2.88082 43 - -
4487 1.38629 1.38629 1.38629 1.38629
4488 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4489 44 3.15189 2.63533 3.19760 0.16881 44 - -
4490 1.38629 1.38629 1.38629 1.38629
4491 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547
4492 45 1.98377 2.36627 2.60703 0.36404 45 - -
4493 1.38629 1.38629 1.38629 1.38629
4494 0.01794 4.02957 * 1.46634 0.26236 0.00000 *
4495 //
4496 HMMER3/b [3.0 | March 2010]
4497 NAME 3_End_Metazoa_58S_end_fortyoned_long
4498 LENG 45
4499 ALPH DNA
4500 RF no
4501 CS no
4502 MAP yes
4503 DATE Sat Feb 25 14:46:22 2012
4504 NSEQ 3
4505 EFFN 3.000000
4506 CKSUM 2629441741
4507 STATS LOCAL MSV -7.8868 0.72036
4508 STATS LOCAL VITERBI -7.8389 0.72036
4509 STATS LOCAL FORWARD -3.5128 0.72036
4510 HMM A C G T
4511 m->m m->i m->d i->m i->i d->m d->d
4512 COMPO 1.79123 1.15229 1.19955 1.53246
4513 1.38629 1.38629 1.38629 1.38629
4514 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
4515 1 3.30705 0.14631 3.36166 2.73626 1 - -
4516 1.38629 1.38629 1.38629 1.38629
4517 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4518 2 2.86982 3.47591 0.13017 3.36931 2 - -
4519 1.38629 1.38629 1.38629 1.38629
4520 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4521 3 2.86982 3.47591 0.13017 3.36931 3 - -
4522 1.38629 1.38629 1.38629 1.38629
4523 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4524 4 2.97980 2.52563 3.03204 0.19727 4 - -
4525 1.38629 1.38629 1.38629 1.38629
4526 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4527 5 3.30705 0.14631 3.36166 2.73626 5 - -
4528 1.38629 1.38629 1.38629 1.38629
4529 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4530 6 2.97980 2.52563 3.03204 0.19727 6 - -
4531 1.38629 1.38629 1.38629 1.38629
4532 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4533 7 3.30705 0.14631 3.36166 2.73626 7 - -
4534 1.38629 1.38629 1.38629 1.38629
4535 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4536 8 2.86982 3.47591 0.13017 3.36931 8 - -
4537 1.38629 1.38629 1.38629 1.38629
4538 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4539 9 2.86982 3.47591 0.13017 3.36931 9 - -
4540 1.38629 1.38629 1.38629 1.38629
4541 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4542 10 2.86982 3.47591 0.13017 3.36931 10 - -
4543 1.38629 1.38629 1.38629 1.38629
4544 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4545 11 2.97980 2.52563 3.03204 0.19727 11 - -
4546 1.38629 1.38629 1.38629 1.38629
4547 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4548 12 0.15719 3.27118 2.73043 3.16274 12 - -
4549 1.38629 1.38629 1.38629 1.38629
4550 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4551 13 0.15719 3.27118 2.73043 3.16274 13 - -
4552 1.38629 1.38629 1.38629 1.38629
4553 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4554 14 3.30705 0.14631 3.36166 2.73626 14 - -
4555 1.38629 1.38629 1.38629 1.38629
4556 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4557 15 2.97980 2.52563 3.03204 0.19727 15 - -
4558 1.38629 1.38629 1.38629 1.38629
4559 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4560 16 3.30705 0.14631 3.36166 2.73626 16 - -
4561 1.38629 1.38629 1.38629 1.38629
4562 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4563 17 3.30705 0.14631 3.36166 2.73626 17 - -
4564 1.38629 1.38629 1.38629 1.38629
4565 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4566 18 3.30705 0.14631 3.36166 2.73626 18 - -
4567 1.38629 1.38629 1.38629 1.38629
4568 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4569 19 2.86982 3.47591 0.13017 3.36931 19 - -
4570 1.38629 1.38629 1.38629 1.38629
4571 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4572 20 2.86982 3.47591 0.13017 3.36931 20 - -
4573 1.38629 1.38629 1.38629 1.38629
4574 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4575 21 2.86982 3.47591 0.13017 3.36931 21 - -
4576 1.38629 1.38629 1.38629 1.38629
4577 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4578 22 0.15719 3.27118 2.73043 3.16274 22 - -
4579 1.38629 1.38629 1.38629 1.38629
4580 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4581 23 3.30705 0.14631 3.36166 2.73626 23 - -
4582 1.38629 1.38629 1.38629 1.38629
4583 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4584 24 3.30705 0.14631 3.36166 2.73626 24 - -
4585 1.38629 1.38629 1.38629 1.38629
4586 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4587 25 0.15719 3.27118 2.73043 3.16274 25 - -
4588 1.38629 1.38629 1.38629 1.38629
4589 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4590 26 3.30705 0.14631 3.36166 2.73626 26 - -
4591 1.38629 1.38629 1.38629 1.38629
4592 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4593 27 2.86982 3.47591 0.13017 3.36931 27 - -
4594 1.38629 1.38629 1.38629 1.38629
4595 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4596 28 3.30705 0.14631 3.36166 2.73626 28 - -
4597 1.38629 1.38629 1.38629 1.38629
4598 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4599 29 3.30705 0.14631 3.36166 2.73626 29 - -
4600 1.38629 1.38629 1.38629 1.38629
4601 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4602 30 2.97980 2.52563 3.03204 0.19727 30 - -
4603 1.38629 1.38629 1.38629 1.38629
4604 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4605 31 2.86982 3.47591 0.13017 3.36931 31 - -
4606 1.38629 1.38629 1.38629 1.38629
4607 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4608 32 2.97980 2.52563 3.03204 0.19727 32 - -
4609 1.38629 1.38629 1.38629 1.38629
4610 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4611 33 3.30705 0.14631 3.36166 2.73626 33 - -
4612 1.38629 1.38629 1.38629 1.38629
4613 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4614 34 2.97980 2.52563 3.03204 0.19727 34 - -
4615 1.38629 1.38629 1.38629 1.38629
4616 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4617 35 3.30705 0.14631 3.36166 2.73626 35 - -
4618 1.38629 1.38629 1.38629 1.38629
4619 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4620 36 0.15719 3.27118 2.73043 3.16274 36 - -
4621 1.38629 1.38629 1.38629 1.38629
4622 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4623 37 2.86982 3.47591 0.13017 3.36931 37 - -
4624 1.38629 1.38629 1.38629 1.38629
4625 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4626 38 2.86982 3.47591 0.13017 3.36931 38 - -
4627 1.38629 1.38629 1.38629 1.38629
4628 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4629 39 2.86982 3.47591 0.13017 3.36931 39 - -
4630 1.38629 1.38629 1.38629 1.38629
4631 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4632 40 2.97980 2.52563 3.03204 0.19727 40 - -
4633 1.38629 1.38629 1.38629 1.38629
4634 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4635 41 3.30705 0.14631 3.36166 2.73626 41 - -
4636 1.38629 1.38629 1.38629 1.38629
4637 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4638 42 2.86982 3.47591 0.13017 3.36931 42 - -
4639 1.38629 1.38629 1.38629 1.38629
4640 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4641 43 0.15719 3.27118 2.73043 3.16274 43 - -
4642 1.38629 1.38629 1.38629 1.38629
4643 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4644 44 2.97980 2.52563 3.03204 0.19727 44 - -
4645 1.38629 1.38629 1.38629 1.38629
4646 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4647 45 1.31633 2.11286 2.18717 0.69564 45 - -
4648 1.38629 1.38629 1.38629 1.38629
4649 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
4650 //
4651 HMMER3/b [3.0 | March 2010]
4652 NAME 3_End_Metazoa_58S_end_fortyonee_long
4653 LENG 45
4654 ALPH DNA
4655 RF no
4656 CS no
4657 MAP yes
4658 DATE Sat Feb 25 14:46:29 2012
4659 NSEQ 8
4660 EFFN 3.199219
4661 CKSUM 1510523105
4662 STATS LOCAL MSV -8.0942 0.71931
4663 STATS LOCAL VITERBI -7.7144 0.71931
4664 STATS LOCAL FORWARD -3.8492 0.71931
4665 HMM A C G T
4666 m->m m->i m->d i->m i->i d->m d->d
4667 COMPO 1.92718 1.19573 1.04178 1.61378
4668 1.38629 1.38629 1.38629 1.38629
4669 0.03775 3.98884 3.98884 1.46634 0.26236 0.00000 *
4670 1 3.38655 0.13590 3.43796 2.79498 1 - -
4671 1.38629 1.38629 1.38629 1.38629
4672 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4673 2 2.91917 3.54665 0.12176 3.44709 2 - -
4674 1.38629 1.38629 1.38629 1.38629
4675 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4676 3 2.91917 3.54665 0.12176 3.44709 3 - -
4677 1.38629 1.38629 1.38629 1.38629
4678 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4679 4 3.38655 0.13590 3.43796 2.79498 4 - -
4680 1.38629 1.38629 1.38629 1.38629
4681 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4682 5 3.38655 0.13590 3.43796 2.79498 5 - -
4683 1.38629 1.38629 1.38629 1.38629
4684 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4685 6 3.04806 2.56931 3.09775 0.18535 6 - -
4686 1.38629 1.38629 1.38629 1.38629
4687 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4688 7 3.38655 0.13590 3.43796 2.79498 7 - -
4689 1.38629 1.38629 1.38629 1.38629
4690 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4691 8 2.91917 3.54665 0.12176 3.44709 8 - -
4692 1.38629 1.38629 1.38629 1.38629
4693 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4694 9 2.91917 3.54665 0.12176 3.44709 9 - -
4695 1.38629 1.38629 1.38629 1.38629
4696 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4697 10 2.91917 3.54665 0.12176 3.44709 10 - -
4698 1.38629 1.38629 1.38629 1.38629
4699 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4700 11 3.04806 2.56931 3.09775 0.18535 11 - -
4701 1.38629 1.38629 1.38629 1.38629
4702 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4703 12 0.14734 3.33991 2.77563 3.23778 12 - -
4704 1.38629 1.38629 1.38629 1.38629
4705 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4706 13 0.14734 3.33991 2.77563 3.23778 13 - -
4707 1.38629 1.38629 1.38629 1.38629
4708 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4709 14 3.38655 0.13590 3.43796 2.79498 14 - -
4710 1.38629 1.38629 1.38629 1.38629
4711 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4712 15 3.04806 2.56931 3.09775 0.18535 15 - -
4713 1.38629 1.38629 1.38629 1.38629
4714 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4715 16 3.38655 0.13590 3.43796 2.79498 16 - -
4716 1.38629 1.38629 1.38629 1.38629
4717 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4718 17 3.38655 0.13590 3.43796 2.79498 17 - -
4719 1.38629 1.38629 1.38629 1.38629
4720 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4721 18 3.38655 0.13590 3.43796 2.79498 18 - -
4722 1.38629 1.38629 1.38629 1.38629
4723 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4724 19 2.91917 3.54665 0.12176 3.44709 19 - -
4725 1.38629 1.38629 1.38629 1.38629
4726 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4727 20 0.14734 3.33991 2.77563 3.23778 20 - -
4728 1.38629 1.38629 1.38629 1.38629
4729 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4730 21 2.91917 3.54665 0.12176 3.44709 21 - -
4731 1.38629 1.38629 1.38629 1.38629
4732 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4733 22 2.91917 3.54665 0.12176 3.44709 22 - -
4734 1.38629 1.38629 1.38629 1.38629
4735 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4736 23 3.38655 0.13590 3.43796 2.79498 23 - -
4737 1.38629 1.38629 1.38629 1.38629
4738 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4739 24 3.38655 0.13590 3.43796 2.79498 24 - -
4740 1.38629 1.38629 1.38629 1.38629
4741 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4742 25 0.14734 3.33991 2.77563 3.23778 25 - -
4743 1.38629 1.38629 1.38629 1.38629
4744 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4745 26 3.38655 0.13590 3.43796 2.79498 26 - -
4746 1.38629 1.38629 1.38629 1.38629
4747 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4748 27 2.91917 3.54665 0.12176 3.44709 27 - -
4749 1.38629 1.38629 1.38629 1.38629
4750 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4751 28 3.04806 2.56931 3.09775 0.18535 28 - -
4752 1.38629 1.38629 1.38629 1.38629
4753 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4754 29 3.38655 0.13590 3.43796 2.79498 29 - -
4755 1.38629 1.38629 1.38629 1.38629
4756 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4757 30 3.04806 2.56931 3.09775 0.18535 30 - -
4758 1.38629 1.38629 1.38629 1.38629
4759 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4760 31 2.91917 3.54665 0.12176 3.44709 31 - -
4761 1.38629 1.38629 1.38629 1.38629
4762 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4763 32 3.04806 2.56931 3.09775 0.18535 32 - -
4764 1.38629 1.38629 1.38629 1.38629
4765 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4766 33 3.38655 0.13590 3.43796 2.79498 33 - -
4767 1.38629 1.38629 1.38629 1.38629
4768 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4769 34 3.04806 2.56931 3.09775 0.18535 34 - -
4770 1.38629 1.38629 1.38629 1.38629
4771 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4772 35 2.91917 3.54665 0.12176 3.44709 35 - -
4773 1.38629 1.38629 1.38629 1.38629
4774 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4775 36 0.14734 3.33991 2.77563 3.23778 36 - -
4776 1.38629 1.38629 1.38629 1.38629
4777 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4778 37 2.91917 3.54665 0.12176 3.44709 37 - -
4779 1.38629 1.38629 1.38629 1.38629
4780 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4781 38 2.91917 3.54665 0.12176 3.44709 38 - -
4782 1.38629 1.38629 1.38629 1.38629
4783 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4784 39 2.91917 3.54665 0.12176 3.44709 39 - -
4785 1.38629 1.38629 1.38629 1.38629
4786 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4787 40 3.04806 2.56931 3.09775 0.18535 40 - -
4788 1.38629 1.38629 1.38629 1.38629
4789 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4790 41 3.38655 0.13590 3.43796 2.79498 41 - -
4791 1.38629 1.38629 1.38629 1.38629
4792 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4793 42 2.91917 3.54665 0.12176 3.44709 42 - -
4794 1.38629 1.38629 1.38629 1.38629
4795 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4796 43 2.91917 3.54665 0.12176 3.44709 43 - -
4797 1.38629 1.38629 1.38629 1.38629
4798 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4799 44 2.43829 1.24940 2.50849 0.60766 44 - -
4800 1.38629 1.38629 1.38629 1.38629
4801 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
4802 45 2.91917 3.54665 0.12176 3.44709 45 - -
4803 1.38629 1.38629 1.38629 1.38629
4804 0.01905 3.97014 * 1.46634 0.26236 0.00000 *
4805 //
4806 HMMER3/b [3.0 | March 2010]
4807 NAME 3_End_Metazoa_58S_end_fortyonef_long
4808 LENG 45
4809 ALPH DNA
4810 RF no
4811 CS no
4812 MAP yes
4813 DATE Sat Feb 25 14:46:34 2012
4814 NSEQ 8
4815 EFFN 3.300781
4816 CKSUM 1006154723
4817 STATS LOCAL MSV -8.1502 0.71931
4818 STATS LOCAL VITERBI -7.8569 0.71931
4819 STATS LOCAL FORWARD -3.8991 0.71931
4820 HMM A C G T
4821 m->m m->i m->d i->m i->i d->m d->d
4822 COMPO 2.19096 1.09950 0.99259 1.68991
4823 1.38629 1.38629 1.38629 1.38629
4824 0.03704 4.00748 4.00748 1.46634 0.26236 0.00000 *
4825 1 3.42500 0.13118 3.47480 2.82309 1 - -
4826 1.38629 1.38629 1.38629 1.38629
4827 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4828 2 2.94261 3.58061 0.11794 3.48454 2 - -
4829 1.38629 1.38629 1.38629 1.38629
4830 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4831 3 2.94261 3.58061 0.11794 3.48454 3 - -
4832 1.38629 1.38629 1.38629 1.38629
4833 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4834 4 3.42500 0.13118 3.47480 2.82309 4 - -
4835 1.38629 1.38629 1.38629 1.38629
4836 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4837 5 2.58757 1.55569 2.65338 0.44108 5 - -
4838 1.38629 1.38629 1.38629 1.38629
4839 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4840 6 3.42500 0.13118 3.47480 2.82309 6 - -
4841 1.38629 1.38629 1.38629 1.38629
4842 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4843 7 3.42500 0.13118 3.47480 2.82309 7 - -
4844 1.38629 1.38629 1.38629 1.38629
4845 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4846 8 2.94261 3.58061 0.11794 3.48454 8 - -
4847 1.38629 1.38629 1.38629 1.38629
4848 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4849 9 2.94261 3.58061 0.11794 3.48454 9 - -
4850 1.38629 1.38629 1.38629 1.38629
4851 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4852 10 2.94261 3.58061 0.11794 3.48454 10 - -
4853 1.38629 1.38629 1.38629 1.38629
4854 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4855 11 3.08151 2.59063 3.12994 0.17982 11 - -
4856 1.38629 1.38629 1.38629 1.38629
4857 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4858 12 3.42500 0.13118 3.47480 2.82309 12 - -
4859 1.38629 1.38629 1.38629 1.38629
4860 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4861 13 0.14283 3.37323 2.79735 3.27422 13 - -
4862 1.38629 1.38629 1.38629 1.38629
4863 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4864 14 2.63568 0.44340 2.70558 1.51574 14 - -
4865 1.38629 1.38629 1.38629 1.38629
4866 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4867 15 3.08151 2.59063 3.12994 0.17982 15 - -
4868 1.38629 1.38629 1.38629 1.38629
4869 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4870 16 3.42500 0.13118 3.47480 2.82309 16 - -
4871 1.38629 1.38629 1.38629 1.38629
4872 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4873 17 3.42500 0.13118 3.47480 2.82309 17 - -
4874 1.38629 1.38629 1.38629 1.38629
4875 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4876 18 3.42500 0.13118 3.47480 2.82309 18 - -
4877 1.38629 1.38629 1.38629 1.38629
4878 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4879 19 2.94261 3.58061 0.11794 3.48454 19 - -
4880 1.38629 1.38629 1.38629 1.38629
4881 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4882 20 2.94261 3.58061 0.11794 3.48454 20 - -
4883 1.38629 1.38629 1.38629 1.38629
4884 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4885 21 2.94261 3.58061 0.11794 3.48454 21 - -
4886 1.38629 1.38629 1.38629 1.38629
4887 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4888 22 2.94261 3.58061 0.11794 3.48454 22 - -
4889 1.38629 1.38629 1.38629 1.38629
4890 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4891 23 3.42500 0.13118 3.47480 2.82309 23 - -
4892 1.38629 1.38629 1.38629 1.38629
4893 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4894 24 3.42500 0.13118 3.47480 2.82309 24 - -
4895 1.38629 1.38629 1.38629 1.38629
4896 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4897 25 0.14283 3.37323 2.79735 3.27422 25 - -
4898 1.38629 1.38629 1.38629 1.38629
4899 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4900 26 3.42500 0.13118 3.47480 2.82309 26 - -
4901 1.38629 1.38629 1.38629 1.38629
4902 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4903 27 2.94261 3.58061 0.11794 3.48454 27 - -
4904 1.38629 1.38629 1.38629 1.38629
4905 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4906 28 2.58757 1.55569 2.65338 0.44108 28 - -
4907 1.38629 1.38629 1.38629 1.38629
4908 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4909 29 3.42500 0.13118 3.47480 2.82309 29 - -
4910 1.38629 1.38629 1.38629 1.38629
4911 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4912 30 3.08151 2.59063 3.12994 0.17982 30 - -
4913 1.38629 1.38629 1.38629 1.38629
4914 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4915 31 2.94261 3.58061 0.11794 3.48454 31 - -
4916 1.38629 1.38629 1.38629 1.38629
4917 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4918 32 3.08151 2.59063 3.12994 0.17982 32 - -
4919 1.38629 1.38629 1.38629 1.38629
4920 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4921 33 3.42500 0.13118 3.47480 2.82309 33 - -
4922 1.38629 1.38629 1.38629 1.38629
4923 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4924 34 3.08151 2.59063 3.12994 0.17982 34 - -
4925 1.38629 1.38629 1.38629 1.38629
4926 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4927 35 2.94261 3.58061 0.11794 3.48454 35 - -
4928 1.38629 1.38629 1.38629 1.38629
4929 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4930 36 0.14283 3.37323 2.79735 3.27422 36 - -
4931 1.38629 1.38629 1.38629 1.38629
4932 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4933 37 2.94261 3.58061 0.11794 3.48454 37 - -
4934 1.38629 1.38629 1.38629 1.38629
4935 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4936 38 2.94261 3.58061 0.11794 3.48454 38 - -
4937 1.38629 1.38629 1.38629 1.38629
4938 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4939 39 2.94261 3.58061 0.11794 3.48454 39 - -
4940 1.38629 1.38629 1.38629 1.38629
4941 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4942 40 3.08151 2.59063 3.12994 0.17982 40 - -
4943 1.38629 1.38629 1.38629 1.38629
4944 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4945 41 3.42500 0.13118 3.47480 2.82309 41 - -
4946 1.38629 1.38629 1.38629 1.38629
4947 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4948 42 2.94261 3.58061 0.11794 3.48454 42 - -
4949 1.38629 1.38629 1.38629 1.38629
4950 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4951 43 2.94261 3.58061 0.11794 3.48454 43 - -
4952 1.38629 1.38629 1.38629 1.38629
4953 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4954 44 3.42500 0.13118 3.47480 2.82309 44 - -
4955 1.38629 1.38629 1.38629 1.38629
4956 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4957 45 2.94261 3.58061 0.11794 3.48454 45 - -
4958 1.38629 1.38629 1.38629 1.38629
4959 0.01869 3.98913 * 1.46634 0.26236 0.00000 *
4960 //
4961 HMMER3/b [3.0 | March 2010]
4962 NAME 3_End_Metazoa_58S_end_fortyoneg_long
4963 LENG 45
4964 ALPH DNA
4965 RF no
4966 CS no
4967 MAP yes
4968 DATE Sat Feb 25 14:46:39 2012
4969 NSEQ 3
4970 EFFN 3.000000
4971 CKSUM 2752023140
4972 STATS LOCAL MSV -8.0112 0.71987
4973 STATS LOCAL VITERBI -7.8601 0.71987
4974 STATS LOCAL FORWARD -4.0646 0.71987
4975 HMM A C G T
4976 m->m m->i m->d i->m i->i d->m d->d
4977 COMPO 2.04242 1.15565 1.09893 1.50414
4978 1.38629 1.38629 1.38629 1.38629
4979 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
4980 1 3.30705 0.14631 3.36166 2.73626 1 - -
4981 1.38629 1.38629 1.38629 1.38629
4982 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4983 2 2.86982 3.47591 0.13017 3.36931 2 - -
4984 1.38629 1.38629 1.38629 1.38629
4985 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4986 3 2.86982 3.47591 0.13017 3.36931 3 - -
4987 1.38629 1.38629 1.38629 1.38629
4988 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4989 4 3.30705 0.14631 3.36166 2.73626 4 - -
4990 1.38629 1.38629 1.38629 1.38629
4991 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4992 5 2.97980 2.52563 3.03204 0.19727 5 - -
4993 1.38629 1.38629 1.38629 1.38629
4994 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4995 6 2.97980 2.52563 3.03204 0.19727 6 - -
4996 1.38629 1.38629 1.38629 1.38629
4997 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
4998 7 3.30705 0.14631 3.36166 2.73626 7 - -
4999 1.38629 1.38629 1.38629 1.38629
5000 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5001 8 2.86982 3.47591 0.13017 3.36931 8 - -
5002 1.38629 1.38629 1.38629 1.38629
5003 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5004 9 2.86982 3.47591 0.13017 3.36931 9 - -
5005 1.38629 1.38629 1.38629 1.38629
5006 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5007 10 2.86982 3.47591 0.13017 3.36931 10 - -
5008 1.38629 1.38629 1.38629 1.38629
5009 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5010 11 2.97980 2.52563 3.03204 0.19727 11 - -
5011 1.38629 1.38629 1.38629 1.38629
5012 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5013 12 3.30705 0.14631 3.36166 2.73626 12 - -
5014 1.38629 1.38629 1.38629 1.38629
5015 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5016 13 0.15719 3.27118 2.73043 3.16274 13 - -
5017 1.38629 1.38629 1.38629 1.38629
5018 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5019 14 3.30705 0.14631 3.36166 2.73626 14 - -
5020 1.38629 1.38629 1.38629 1.38629
5021 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5022 15 2.97980 2.52563 3.03204 0.19727 15 - -
5023 1.38629 1.38629 1.38629 1.38629
5024 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5025 16 3.30705 0.14631 3.36166 2.73626 16 - -
5026 1.38629 1.38629 1.38629 1.38629
5027 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5028 17 3.30705 0.14631 3.36166 2.73626 17 - -
5029 1.38629 1.38629 1.38629 1.38629
5030 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5031 18 3.30705 0.14631 3.36166 2.73626 18 - -
5032 1.38629 1.38629 1.38629 1.38629
5033 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5034 19 2.86982 3.47591 0.13017 3.36931 19 - -
5035 1.38629 1.38629 1.38629 1.38629
5036 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5037 20 2.86982 3.47591 0.13017 3.36931 20 - -
5038 1.38629 1.38629 1.38629 1.38629
5039 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5040 21 0.15719 3.27118 2.73043 3.16274 21 - -
5041 1.38629 1.38629 1.38629 1.38629
5042 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5043 22 2.86982 3.47591 0.13017 3.36931 22 - -
5044 1.38629 1.38629 1.38629 1.38629
5045 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5046 23 3.30705 0.14631 3.36166 2.73626 23 - -
5047 1.38629 1.38629 1.38629 1.38629
5048 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5049 24 3.30705 0.14631 3.36166 2.73626 24 - -
5050 1.38629 1.38629 1.38629 1.38629
5051 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5052 25 0.15719 3.27118 2.73043 3.16274 25 - -
5053 1.38629 1.38629 1.38629 1.38629
5054 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5055 26 3.30705 0.14631 3.36166 2.73626 26 - -
5056 1.38629 1.38629 1.38629 1.38629
5057 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5058 27 2.86982 3.47591 0.13017 3.36931 27 - -
5059 1.38629 1.38629 1.38629 1.38629
5060 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5061 28 3.30705 0.14631 3.36166 2.73626 28 - -
5062 1.38629 1.38629 1.38629 1.38629
5063 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5064 29 3.30705 0.14631 3.36166 2.73626 29 - -
5065 1.38629 1.38629 1.38629 1.38629
5066 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5067 30 2.97980 2.52563 3.03204 0.19727 30 - -
5068 1.38629 1.38629 1.38629 1.38629
5069 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5070 31 2.86982 3.47591 0.13017 3.36931 31 - -
5071 1.38629 1.38629 1.38629 1.38629
5072 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5073 32 2.97980 2.52563 3.03204 0.19727 32 - -
5074 1.38629 1.38629 1.38629 1.38629
5075 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5076 33 3.30705 0.14631 3.36166 2.73626 33 - -
5077 1.38629 1.38629 1.38629 1.38629
5078 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5079 34 2.97980 2.52563 3.03204 0.19727 34 - -
5080 1.38629 1.38629 1.38629 1.38629
5081 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5082 35 2.86982 3.47591 0.13017 3.36931 35 - -
5083 1.38629 1.38629 1.38629 1.38629
5084 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5085 36 0.15719 3.27118 2.73043 3.16274 36 - -
5086 1.38629 1.38629 1.38629 1.38629
5087 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5088 37 2.86982 3.47591 0.13017 3.36931 37 - -
5089 1.38629 1.38629 1.38629 1.38629
5090 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5091 38 2.86982 3.47591 0.13017 3.36931 38 - -
5092 1.38629 1.38629 1.38629 1.38629
5093 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5094 39 2.86982 3.47591 0.13017 3.36931 39 - -
5095 1.38629 1.38629 1.38629 1.38629
5096 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5097 40 2.97980 2.52563 3.03204 0.19727 40 - -
5098 1.38629 1.38629 1.38629 1.38629
5099 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5100 41 3.30705 0.14631 3.36166 2.73626 41 - -
5101 1.38629 1.38629 1.38629 1.38629
5102 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5103 42 2.86982 3.47591 0.13017 3.36931 42 - -
5104 1.38629 1.38629 1.38629 1.38629
5105 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5106 43 2.86982 3.47591 0.13017 3.36931 43 - -
5107 1.38629 1.38629 1.38629 1.38629
5108 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5109 44 2.97980 2.52563 3.03204 0.19727 44 - -
5110 1.38629 1.38629 1.38629 1.38629
5111 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5112 45 2.97980 2.52563 3.03204 0.19727 45 - -
5113 1.38629 1.38629 1.38629 1.38629
5114 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
5115 //
5116 HMMER3/b [3.0 | March 2010]
5117 NAME 3_End_Metazoa_58S_end_fortyoneh_long
5118 LENG 45
5119 ALPH DNA
5120 RF no
5121 CS no
5122 MAP yes
5123 DATE Sat Feb 25 14:46:46 2012
5124 NSEQ 11
5125 EFFN 3.370361
5126 CKSUM 3371393112
5127 STATS LOCAL MSV -7.2193 0.71933
5128 STATS LOCAL VITERBI -7.8016 0.71933
5129 STATS LOCAL FORWARD -4.0798 0.71933
5130 HMM A C G T
5131 m->m m->i m->d i->m i->i d->m d->d
5132 COMPO 1.99517 1.04017 1.08680 1.75262
5133 1.38629 1.38629 1.38629 1.38629
5134 0.03656 4.02004 4.02004 1.46634 0.26236 0.00000 *
5135 1 3.45055 0.12815 3.49927 2.84168 1 - -
5136 1.38629 1.38629 1.38629 1.38629
5137 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5138 2 2.95806 3.60310 0.11549 3.50937 2 - -
5139 1.38629 1.38629 1.38629 1.38629
5140 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5141 3 2.95806 3.60310 0.11549 3.50937 3 - -
5142 1.38629 1.38629 1.38629 1.38629
5143 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5144 4 3.45055 0.12815 3.49927 2.84168 4 - -
5145 1.38629 1.38629 1.38629 1.38629
5146 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5147 5 2.42298 1.04864 2.49442 0.73734 5 - -
5148 1.38629 1.38629 1.38629 1.38629
5149 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5150 6 3.45055 0.12815 3.49927 2.84168 6 - -
5151 1.38629 1.38629 1.38629 1.38629
5152 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5153 7 2.80636 0.33742 2.87302 1.77528 7 - -
5154 1.38629 1.38629 1.38629 1.38629
5155 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5156 8 2.95806 3.60310 0.11549 3.50937 8 - -
5157 1.38629 1.38629 1.38629 1.38629
5158 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5159 9 2.95806 3.60310 0.11549 3.50937 9 - -
5160 1.38629 1.38629 1.38629 1.38629
5161 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5162 10 2.95806 3.60310 0.11549 3.50937 10 - -
5163 1.38629 1.38629 1.38629 1.38629
5164 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5165 11 3.10392 2.60488 3.15149 0.17623 11 - -
5166 1.38629 1.38629 1.38629 1.38629
5167 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5168 12 3.45055 0.12815 3.49927 2.84168 12 - -
5169 1.38629 1.38629 1.38629 1.38629
5170 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5171 13 0.13991 3.39541 2.81175 3.29851 13 - -
5172 1.38629 1.38629 1.38629 1.38629
5173 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5174 14 3.45055 0.12815 3.49927 2.84168 14 - -
5175 1.38629 1.38629 1.38629 1.38629
5176 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5177 15 3.10392 2.60488 3.15149 0.17623 15 - -
5178 1.38629 1.38629 1.38629 1.38629
5179 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5180 16 3.45055 0.12815 3.49927 2.84168 16 - -
5181 1.38629 1.38629 1.38629 1.38629
5182 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5183 17 3.45055 0.12815 3.49927 2.84168 17 - -
5184 1.38629 1.38629 1.38629 1.38629
5185 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5186 18 3.45055 0.12815 3.49927 2.84168 18 - -
5187 1.38629 1.38629 1.38629 1.38629
5188 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5189 19 2.95806 3.60310 0.11549 3.50937 19 - -
5190 1.38629 1.38629 1.38629 1.38629
5191 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5192 20 2.95806 3.60310 0.11549 3.50937 20 - -
5193 1.38629 1.38629 1.38629 1.38629
5194 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5195 21 0.13991 3.39541 2.81175 3.29851 21 - -
5196 1.38629 1.38629 1.38629 1.38629
5197 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5198 22 2.95806 3.60310 0.11549 3.50937 22 - -
5199 1.38629 1.38629 1.38629 1.38629
5200 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5201 23 3.45055 0.12815 3.49927 2.84168 23 - -
5202 1.38629 1.38629 1.38629 1.38629
5203 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5204 24 3.45055 0.12815 3.49927 2.84168 24 - -
5205 1.38629 1.38629 1.38629 1.38629
5206 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5207 25 0.13991 3.39541 2.81175 3.29851 25 - -
5208 1.38629 1.38629 1.38629 1.38629
5209 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5210 26 3.45055 0.12815 3.49927 2.84168 26 - -
5211 1.38629 1.38629 1.38629 1.38629
5212 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5213 27 2.95806 3.60310 0.11549 3.50937 27 - -
5214 1.38629 1.38629 1.38629 1.38629
5215 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5216 28 3.45055 0.12815 3.49927 2.84168 28 - -
5217 1.38629 1.38629 1.38629 1.38629
5218 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5219 29 3.45055 0.12815 3.49927 2.84168 29 - -
5220 1.38629 1.38629 1.38629 1.38629
5221 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5222 30 3.10392 2.60488 3.15149 0.17623 30 - -
5223 1.38629 1.38629 1.38629 1.38629
5224 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5225 31 2.95806 3.60310 0.11549 3.50937 31 - -
5226 1.38629 1.38629 1.38629 1.38629
5227 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5228 32 3.10392 2.60488 3.15149 0.17623 32 - -
5229 1.38629 1.38629 1.38629 1.38629
5230 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5231 33 3.45055 0.12815 3.49927 2.84168 33 - -
5232 1.38629 1.38629 1.38629 1.38629
5233 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5234 34 3.10392 2.60488 3.15149 0.17623 34 - -
5235 1.38629 1.38629 1.38629 1.38629
5236 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5237 35 2.95806 3.60310 0.11549 3.50937 35 - -
5238 1.38629 1.38629 1.38629 1.38629
5239 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5240 36 0.13991 3.39541 2.81175 3.29851 36 - -
5241 1.38629 1.38629 1.38629 1.38629
5242 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5243 37 2.95806 3.60310 0.11549 3.50937 37 - -
5244 1.38629 1.38629 1.38629 1.38629
5245 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5246 38 2.95806 3.60310 0.11549 3.50937 38 - -
5247 1.38629 1.38629 1.38629 1.38629
5248 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5249 39 2.95806 3.60310 0.11549 3.50937 39 - -
5250 1.38629 1.38629 1.38629 1.38629
5251 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5252 40 3.10392 2.60488 3.15149 0.17623 40 - -
5253 1.38629 1.38629 1.38629 1.38629
5254 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5255 41 3.45055 0.12815 3.49927 2.84168 41 - -
5256 1.38629 1.38629 1.38629 1.38629
5257 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5258 42 2.95806 3.60310 0.11549 3.50937 42 - -
5259 1.38629 1.38629 1.38629 1.38629
5260 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5261 43 2.95806 3.60310 0.11549 3.50937 43 - -
5262 1.38629 1.38629 1.38629 1.38629
5263 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5264 44 3.45055 0.12815 3.49927 2.84168 44 - -
5265 1.38629 1.38629 1.38629 1.38629
5266 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547
5267 45 0.72443 2.22589 2.18730 1.22007 45 - -
5268 1.38629 1.38629 1.38629 1.38629
5269 0.01845 4.00193 * 1.46634 0.26236 0.00000 *
5270 //
5271 HMMER3/b [3.0 | March 2010]
5272 NAME 3_End_Metazoa_58S_end_fortyonei_long
5273 LENG 45
5274 ALPH DNA
5275 RF no
5276 CS no
5277 MAP yes
5278 DATE Sat Feb 25 14:46:51 2012
5279 NSEQ 4
5280 EFFN 3.253906
5281 CKSUM 2638254345
5282 STATS LOCAL MSV -7.9634 0.71932
5283 STATS LOCAL VITERBI -7.8088 0.71932
5284 STATS LOCAL FORWARD -4.1822 0.71932
5285 HMM A C G T
5286 m->m m->i m->d i->m i->i d->m d->d
5287 COMPO 2.00216 1.20315 1.07261 1.50239
5288 1.38629 1.38629 1.38629 1.38629
5289 0.03736 3.99892 3.99892 1.46634 0.26236 0.00000 *
5290 1 3.40742 0.13331 3.45796 2.81026 1 - -
5291 1.38629 1.38629 1.38629 1.38629
5292 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5293 2 2.93193 3.56511 0.11967 3.46744 2 - -
5294 1.38629 1.38629 1.38629 1.38629
5295 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5296 3 2.93193 3.56511 0.11967 3.46744 3 - -
5297 1.38629 1.38629 1.38629 1.38629
5298 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5299 4 3.40742 0.13331 3.45796 2.81026 4 - -
5300 1.38629 1.38629 1.38629 1.38629
5301 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5302 5 3.06618 2.58087 3.11519 0.18233 5 - -
5303 1.38629 1.38629 1.38629 1.38629
5304 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5305 6 3.06618 2.58087 3.11519 0.18233 6 - -
5306 1.38629 1.38629 1.38629 1.38629
5307 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5308 7 3.06618 2.58087 3.11519 0.18233 7 - -
5309 1.38629 1.38629 1.38629 1.38629
5310 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5311 8 2.93193 3.56511 0.11967 3.46744 8 - -
5312 1.38629 1.38629 1.38629 1.38629
5313 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5314 9 2.93193 3.56511 0.11967 3.46744 9 - -
5315 1.38629 1.38629 1.38629 1.38629
5316 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5317 10 2.93193 3.56511 0.11967 3.46744 10 - -
5318 1.38629 1.38629 1.38629 1.38629
5319 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5320 11 3.06618 2.58087 3.11519 0.18233 11 - -
5321 1.38629 1.38629 1.38629 1.38629
5322 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5323 12 3.40742 0.13331 3.45796 2.81026 12 - -
5324 1.38629 1.38629 1.38629 1.38629
5325 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5326 13 0.14487 3.35799 2.78743 3.25755 13 - -
5327 1.38629 1.38629 1.38629 1.38629
5328 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5329 14 3.40742 0.13331 3.45796 2.81026 14 - -
5330 1.38629 1.38629 1.38629 1.38629
5331 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5332 15 3.06618 2.58087 3.11519 0.18233 15 - -
5333 1.38629 1.38629 1.38629 1.38629
5334 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5335 16 3.40742 0.13331 3.45796 2.81026 16 - -
5336 1.38629 1.38629 1.38629 1.38629
5337 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5338 17 3.40742 0.13331 3.45796 2.81026 17 - -
5339 1.38629 1.38629 1.38629 1.38629
5340 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5341 18 3.40742 0.13331 3.45796 2.81026 18 - -
5342 1.38629 1.38629 1.38629 1.38629
5343 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5344 19 2.93193 3.56511 0.11967 3.46744 19 - -
5345 1.38629 1.38629 1.38629 1.38629
5346 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5347 20 0.86439 2.50382 0.91051 2.35812 20 - -
5348 1.38629 1.38629 1.38629 1.38629
5349 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5350 21 0.14487 3.35799 2.78743 3.25755 21 - -
5351 1.38629 1.38629 1.38629 1.38629
5352 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5353 22 2.93193 3.56511 0.11967 3.46744 22 - -
5354 1.38629 1.38629 1.38629 1.38629
5355 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5356 23 3.40742 0.13331 3.45796 2.81026 23 - -
5357 1.38629 1.38629 1.38629 1.38629
5358 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5359 24 3.40742 0.13331 3.45796 2.81026 24 - -
5360 1.38629 1.38629 1.38629 1.38629
5361 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5362 25 0.14487 3.35799 2.78743 3.25755 25 - -
5363 1.38629 1.38629 1.38629 1.38629
5364 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5365 26 3.40742 0.13331 3.45796 2.81026 26 - -
5366 1.38629 1.38629 1.38629 1.38629
5367 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5368 27 2.93193 3.56511 0.11967 3.46744 27 - -
5369 1.38629 1.38629 1.38629 1.38629
5370 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5371 28 3.40742 0.13331 3.45796 2.81026 28 - -
5372 1.38629 1.38629 1.38629 1.38629
5373 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5374 29 3.40742 0.13331 3.45796 2.81026 29 - -
5375 1.38629 1.38629 1.38629 1.38629
5376 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5377 30 3.06618 2.58087 3.11519 0.18233 30 - -
5378 1.38629 1.38629 1.38629 1.38629
5379 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5380 31 2.93193 3.56511 0.11967 3.46744 31 - -
5381 1.38629 1.38629 1.38629 1.38629
5382 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5383 32 3.06618 2.58087 3.11519 0.18233 32 - -
5384 1.38629 1.38629 1.38629 1.38629
5385 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5386 33 3.40742 0.13331 3.45796 2.81026 33 - -
5387 1.38629 1.38629 1.38629 1.38629
5388 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5389 34 3.06618 2.58087 3.11519 0.18233 34 - -
5390 1.38629 1.38629 1.38629 1.38629
5391 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5392 35 2.93193 3.56511 0.11967 3.46744 35 - -
5393 1.38629 1.38629 1.38629 1.38629
5394 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5395 36 0.14487 3.35799 2.78743 3.25755 36 - -
5396 1.38629 1.38629 1.38629 1.38629
5397 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5398 37 2.93193 3.56511 0.11967 3.46744 37 - -
5399 1.38629 1.38629 1.38629 1.38629
5400 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5401 38 2.93193 3.56511 0.11967 3.46744 38 - -
5402 1.38629 1.38629 1.38629 1.38629
5403 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5404 39 2.93193 3.56511 0.11967 3.46744 39 - -
5405 1.38629 1.38629 1.38629 1.38629
5406 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5407 40 3.06618 2.58087 3.11519 0.18233 40 - -
5408 1.38629 1.38629 1.38629 1.38629
5409 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5410 41 3.40742 0.13331 3.45796 2.81026 41 - -
5411 1.38629 1.38629 1.38629 1.38629
5412 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5413 42 2.93193 3.56511 0.11967 3.46744 42 - -
5414 1.38629 1.38629 1.38629 1.38629
5415 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5416 43 2.93193 3.56511 0.11967 3.46744 43 - -
5417 1.38629 1.38629 1.38629 1.38629
5418 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5419 44 3.06618 2.58087 3.11519 0.18233 44 - -
5420 1.38629 1.38629 1.38629 1.38629
5421 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547
5422 45 2.93193 3.56511 0.11967 3.46744 45 - -
5423 1.38629 1.38629 1.38629 1.38629
5424 0.01885 3.98041 * 1.46634 0.26236 0.00000 *
5425 //
5426 HMMER3/b [3.0 | March 2010]
5427 NAME 3_End_Metazoa_58S_end_fortyonej_long
5428 LENG 45
5429 ALPH DNA
5430 RF no
5431 CS no
5432 MAP yes
5433 DATE Sat Feb 25 14:46:56 2012
5434 NSEQ 2
5435 EFFN 2.000000
5436 CKSUM 4204561327
5437 STATS LOCAL MSV -7.3459 0.72810
5438 STATS LOCAL VITERBI -8.2466 0.72810
5439 STATS LOCAL FORWARD -3.4606 0.72810
5440 HMM A C G T
5441 m->m m->i m->d i->m i->i d->m d->d
5442 COMPO 1.82402 1.11829 1.12097 1.68296
5443 1.38629 1.38629 1.38629 1.38629
5444 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
5445 1 2.81865 0.23582 2.88868 2.35662 1 - -
5446 1.38629 1.38629 1.38629 1.38629
5447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5448 2 2.53331 3.02441 0.20344 2.88069 2 - -
5449 1.38629 1.38629 1.38629 1.38629
5450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5451 3 2.53331 3.02441 0.20344 2.88069 3 - -
5452 1.38629 1.38629 1.38629 1.38629
5453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5454 4 2.81865 0.23582 2.88868 2.35662 4 - -
5455 1.38629 1.38629 1.38629 1.38629
5456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5457 5 2.15554 1.00938 2.23102 0.88601 5 - -
5458 1.38629 1.38629 1.38629 1.38629
5459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5460 6 2.57915 2.25909 2.64442 0.28946 6 - -
5461 1.38629 1.38629 1.38629 1.38629
5462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5463 7 2.81865 0.23582 2.88868 2.35662 7 - -
5464 1.38629 1.38629 1.38629 1.38629
5465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5466 8 2.53331 3.02441 0.20344 2.88069 8 - -
5467 1.38629 1.38629 1.38629 1.38629
5468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5469 9 2.53331 3.02441 0.20344 2.88069 9 - -
5470 1.38629 1.38629 1.38629 1.38629
5471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5472 10 2.53331 3.02441 0.20344 2.88069 10 - -
5473 1.38629 1.38629 1.38629 1.38629
5474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5475 11 2.57915 2.25909 2.64442 0.28946 11 - -
5476 1.38629 1.38629 1.38629 1.38629
5477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5478 12 2.81865 0.23582 2.88868 2.35662 12 - -
5479 1.38629 1.38629 1.38629 1.38629
5480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5481 13 0.23862 2.84929 2.43386 2.70756 13 - -
5482 1.38629 1.38629 1.38629 1.38629
5483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5484 14 2.81865 0.23582 2.88868 2.35662 14 - -
5485 1.38629 1.38629 1.38629 1.38629
5486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5487 15 2.57915 2.25909 2.64442 0.28946 15 - -
5488 1.38629 1.38629 1.38629 1.38629
5489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5490 16 2.81865 0.23582 2.88868 2.35662 16 - -
5491 1.38629 1.38629 1.38629 1.38629
5492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5493 17 2.81865 0.23582 2.88868 2.35662 17 - -
5494 1.38629 1.38629 1.38629 1.38629
5495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5496 18 2.81865 0.23582 2.88868 2.35662 18 - -
5497 1.38629 1.38629 1.38629 1.38629
5498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5499 19 2.53331 3.02441 0.20344 2.88069 19 - -
5500 1.38629 1.38629 1.38629 1.38629
5501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5502 20 2.53331 3.02441 0.20344 2.88069 20 - -
5503 1.38629 1.38629 1.38629 1.38629
5504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5505 21 0.23862 2.84929 2.43386 2.70756 21 - -
5506 1.38629 1.38629 1.38629 1.38629
5507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5508 22 2.53331 3.02441 0.20344 2.88069 22 - -
5509 1.38629 1.38629 1.38629 1.38629
5510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5511 23 2.81865 0.23582 2.88868 2.35662 23 - -
5512 1.38629 1.38629 1.38629 1.38629
5513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5514 24 2.81865 0.23582 2.88868 2.35662 24 - -
5515 1.38629 1.38629 1.38629 1.38629
5516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5517 25 0.23862 2.84929 2.43386 2.70756 25 - -
5518 1.38629 1.38629 1.38629 1.38629
5519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5520 26 2.81865 0.23582 2.88868 2.35662 26 - -
5521 1.38629 1.38629 1.38629 1.38629
5522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5523 27 2.53331 3.02441 0.20344 2.88069 27 - -
5524 1.38629 1.38629 1.38629 1.38629
5525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5526 28 2.81865 0.23582 2.88868 2.35662 28 - -
5527 1.38629 1.38629 1.38629 1.38629
5528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5529 29 2.81865 0.23582 2.88868 2.35662 29 - -
5530 1.38629 1.38629 1.38629 1.38629
5531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5532 30 2.57915 2.25909 2.64442 0.28946 30 - -
5533 1.38629 1.38629 1.38629 1.38629
5534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5535 31 2.53331 3.02441 0.20344 2.88069 31 - -
5536 1.38629 1.38629 1.38629 1.38629
5537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5538 32 2.57915 2.25909 2.64442 0.28946 32 - -
5539 1.38629 1.38629 1.38629 1.38629
5540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5541 33 2.81865 0.23582 2.88868 2.35662 33 - -
5542 1.38629 1.38629 1.38629 1.38629
5543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5544 34 2.81865 0.23582 2.88868 2.35662 34 - -
5545 1.38629 1.38629 1.38629 1.38629
5546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5547 35 2.53331 3.02441 0.20344 2.88069 35 - -
5548 1.38629 1.38629 1.38629 1.38629
5549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5550 36 0.23862 2.84929 2.43386 2.70756 36 - -
5551 1.38629 1.38629 1.38629 1.38629
5552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5553 37 2.53331 3.02441 0.20344 2.88069 37 - -
5554 1.38629 1.38629 1.38629 1.38629
5555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5556 38 2.53331 3.02441 0.20344 2.88069 38 - -
5557 1.38629 1.38629 1.38629 1.38629
5558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5559 39 2.53331 3.02441 0.20344 2.88069 39 - -
5560 1.38629 1.38629 1.38629 1.38629
5561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5562 40 2.57915 2.25909 2.64442 0.28946 40 - -
5563 1.38629 1.38629 1.38629 1.38629
5564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5565 41 2.15554 1.00938 2.23102 0.88601 41 - -
5566 1.38629 1.38629 1.38629 1.38629
5567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5568 42 2.53331 3.02441 0.20344 2.88069 42 - -
5569 1.38629 1.38629 1.38629 1.38629
5570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5571 43 2.53331 3.02441 0.20344 2.88069 43 - -
5572 1.38629 1.38629 1.38629 1.38629
5573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5574 44 2.81865 0.23582 2.88868 2.35662 44 - -
5575 1.38629 1.38629 1.38629 1.38629
5576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5577 45 0.23862 2.84929 2.43386 2.70756 45 - -
5578 1.38629 1.38629 1.38629 1.38629
5579 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
5580 //
5581 HMMER3/b [3.0 | March 2010]
5582 NAME 3_End_Metazoa_58S_end_fortyonek_long
5583 LENG 45
5584 ALPH DNA
5585 RF no
5586 CS no
5587 MAP yes
5588 DATE Sat Feb 25 14:47:03 2012
5589 NSEQ 2
5590 EFFN 2.000000
5591 CKSUM 1792586209
5592 STATS LOCAL MSV -7.4246 0.72709
5593 STATS LOCAL VITERBI -8.3745 0.72709
5594 STATS LOCAL FORWARD -3.2313 0.72709
5595 HMM A C G T
5596 m->m m->i m->d i->m i->i d->m d->d
5597 COMPO 1.92710 1.15123 1.08134 1.61425
5598 1.38629 1.38629 1.38629 1.38629
5599 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
5600 1 2.81865 0.23582 2.88868 2.35662 1 - -
5601 1.38629 1.38629 1.38629 1.38629
5602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5603 2 2.53331 3.02441 0.20344 2.88069 2 - -
5604 1.38629 1.38629 1.38629 1.38629
5605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5606 3 2.53331 3.02441 0.20344 2.88069 3 - -
5607 1.38629 1.38629 1.38629 1.38629
5608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5609 4 2.81865 0.23582 2.88868 2.35662 4 - -
5610 1.38629 1.38629 1.38629 1.38629
5611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5612 5 2.81865 0.23582 2.88868 2.35662 5 - -
5613 1.38629 1.38629 1.38629 1.38629
5614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5615 6 2.57915 2.25909 2.64442 0.28946 6 - -
5616 1.38629 1.38629 1.38629 1.38629
5617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5618 7 2.53331 3.02441 0.20344 2.88069 7 - -
5619 1.38629 1.38629 1.38629 1.38629
5620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5621 8 2.53331 3.02441 0.20344 2.88069 8 - -
5622 1.38629 1.38629 1.38629 1.38629
5623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5624 9 2.53331 3.02441 0.20344 2.88069 9 - -
5625 1.38629 1.38629 1.38629 1.38629
5626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5627 10 2.53331 3.02441 0.20344 2.88069 10 - -
5628 1.38629 1.38629 1.38629 1.38629
5629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5630 11 2.57915 2.25909 2.64442 0.28946 11 - -
5631 1.38629 1.38629 1.38629 1.38629
5632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5633 12 2.81865 0.23582 2.88868 2.35662 12 - -
5634 1.38629 1.38629 1.38629 1.38629
5635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5636 13 0.23862 2.84929 2.43386 2.70756 13 - -
5637 1.38629 1.38629 1.38629 1.38629
5638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5639 14 2.81865 0.23582 2.88868 2.35662 14 - -
5640 1.38629 1.38629 1.38629 1.38629
5641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5642 15 2.57915 2.25909 2.64442 0.28946 15 - -
5643 1.38629 1.38629 1.38629 1.38629
5644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5645 16 2.81865 0.23582 2.88868 2.35662 16 - -
5646 1.38629 1.38629 1.38629 1.38629
5647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5648 17 2.81865 0.23582 2.88868 2.35662 17 - -
5649 1.38629 1.38629 1.38629 1.38629
5650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5651 18 2.81865 0.23582 2.88868 2.35662 18 - -
5652 1.38629 1.38629 1.38629 1.38629
5653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5654 19 2.81865 0.23582 2.88868 2.35662 19 - -
5655 1.38629 1.38629 1.38629 1.38629
5656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5657 20 0.23862 2.84929 2.43386 2.70756 20 - -
5658 1.38629 1.38629 1.38629 1.38629
5659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5660 21 2.53331 3.02441 0.20344 2.88069 21 - -
5661 1.38629 1.38629 1.38629 1.38629
5662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5663 22 2.53331 3.02441 0.20344 2.88069 22 - -
5664 1.38629 1.38629 1.38629 1.38629
5665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5666 23 2.81865 0.23582 2.88868 2.35662 23 - -
5667 1.38629 1.38629 1.38629 1.38629
5668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5669 24 2.81865 0.23582 2.88868 2.35662 24 - -
5670 1.38629 1.38629 1.38629 1.38629
5671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5672 25 0.23862 2.84929 2.43386 2.70756 25 - -
5673 1.38629 1.38629 1.38629 1.38629
5674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5675 26 2.81865 0.23582 2.88868 2.35662 26 - -
5676 1.38629 1.38629 1.38629 1.38629
5677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5678 27 2.53331 3.02441 0.20344 2.88069 27 - -
5679 1.38629 1.38629 1.38629 1.38629
5680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5681 28 2.57915 2.25909 2.64442 0.28946 28 - -
5682 1.38629 1.38629 1.38629 1.38629
5683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5684 29 2.81865 0.23582 2.88868 2.35662 29 - -
5685 1.38629 1.38629 1.38629 1.38629
5686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5687 30 2.57915 2.25909 2.64442 0.28946 30 - -
5688 1.38629 1.38629 1.38629 1.38629
5689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5690 31 2.53331 3.02441 0.20344 2.88069 31 - -
5691 1.38629 1.38629 1.38629 1.38629
5692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5693 32 2.57915 2.25909 2.64442 0.28946 32 - -
5694 1.38629 1.38629 1.38629 1.38629
5695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5696 33 2.81865 0.23582 2.88868 2.35662 33 - -
5697 1.38629 1.38629 1.38629 1.38629
5698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5699 34 2.57915 2.25909 2.64442 0.28946 34 - -
5700 1.38629 1.38629 1.38629 1.38629
5701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5702 35 2.53331 3.02441 0.20344 2.88069 35 - -
5703 1.38629 1.38629 1.38629 1.38629
5704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5705 36 0.23862 2.84929 2.43386 2.70756 36 - -
5706 1.38629 1.38629 1.38629 1.38629
5707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5708 37 2.53331 3.02441 0.20344 2.88069 37 - -
5709 1.38629 1.38629 1.38629 1.38629
5710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5711 38 2.53331 3.02441 0.20344 2.88069 38 - -
5712 1.38629 1.38629 1.38629 1.38629
5713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5714 39 2.53331 3.02441 0.20344 2.88069 39 - -
5715 1.38629 1.38629 1.38629 1.38629
5716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5717 40 2.57915 2.25909 2.64442 0.28946 40 - -
5718 1.38629 1.38629 1.38629 1.38629
5719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5720 41 2.81865 0.23582 2.88868 2.35662 41 - -
5721 1.38629 1.38629 1.38629 1.38629
5722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5723 42 2.53331 3.02441 0.20344 2.88069 42 - -
5724 1.38629 1.38629 1.38629 1.38629
5725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5726 43 2.53331 3.02441 0.20344 2.88069 43 - -
5727 1.38629 1.38629 1.38629 1.38629
5728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5729 44 2.81865 0.23582 2.88868 2.35662 44 - -
5730 1.38629 1.38629 1.38629 1.38629
5731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5732 45 2.53331 3.02441 0.20344 2.88069 45 - -
5733 1.38629 1.38629 1.38629 1.38629
5734 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
5735 //
5736 HMMER3/b [3.0 | March 2010]
5737 NAME 3_End_Metazoa_58S_end_fortyonel_long
5738 LENG 45
5739 ALPH DNA
5740 RF no
5741 CS no
5742 MAP yes
5743 DATE Sat Feb 25 14:47:08 2012
5744 NSEQ 47
5745 EFFN 3.278870
5746 CKSUM 1171561476
5747 STATS LOCAL MSV -7.9855 0.71932
5748 STATS LOCAL VITERBI -7.7310 0.71932
5749 STATS LOCAL FORWARD -3.7739 0.71932
5750 HMM A C G T
5751 m->m m->i m->d i->m i->i d->m d->d
5752 COMPO 2.09004 1.00197 1.05220 1.83263
5753 1.38629 1.38629 1.38629 1.38629
5754 0.03719 4.00348 4.00348 1.46634 0.26236 0.00000 *
5755 1 3.41682 0.13217 3.46697 2.81712 1 - -
5756 1.38629 1.38629 1.38629 1.38629
5757 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5758 2 2.93765 3.57340 0.11874 3.47658 2 - -
5759 1.38629 1.38629 1.38629 1.38629
5760 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5761 3 2.93765 3.57340 0.11874 3.47658 3 - -
5762 1.38629 1.38629 1.38629 1.38629
5763 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5764 4 3.41682 0.13217 3.46697 2.81712 4 - -
5765 1.38629 1.38629 1.38629 1.38629
5766 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5767 5 3.41682 0.13217 3.46697 2.81712 5 - -
5768 1.38629 1.38629 1.38629 1.38629
5769 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5770 6 3.07437 2.58608 3.12307 0.18099 6 - -
5771 1.38629 1.38629 1.38629 1.38629
5772 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5773 7 3.41682 0.13217 3.46697 2.81712 7 - -
5774 1.38629 1.38629 1.38629 1.38629
5775 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5776 8 2.93765 3.57340 0.11874 3.47658 8 - -
5777 1.38629 1.38629 1.38629 1.38629
5778 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5779 9 2.93765 3.57340 0.11874 3.47658 9 - -
5780 1.38629 1.38629 1.38629 1.38629
5781 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5782 10 2.93765 3.57340 0.11874 3.47658 10 - -
5783 1.38629 1.38629 1.38629 1.38629
5784 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5785 11 3.07437 2.58608 3.12307 0.18099 11 - -
5786 1.38629 1.38629 1.38629 1.38629
5787 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5788 12 3.41682 0.13217 3.46697 2.81712 12 - -
5789 1.38629 1.38629 1.38629 1.38629
5790 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5791 13 3.41682 0.13217 3.46697 2.81712 13 - -
5792 1.38629 1.38629 1.38629 1.38629
5793 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5794 14 1.00314 2.52316 0.77589 2.37760 14 - -
5795 1.38629 1.38629 1.38629 1.38629
5796 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5797 15 3.07437 2.58608 3.12307 0.18099 15 - -
5798 1.38629 1.38629 1.38629 1.38629
5799 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5800 16 3.41682 0.13217 3.46697 2.81712 16 - -
5801 1.38629 1.38629 1.38629 1.38629
5802 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5803 17 3.41682 0.13217 3.46697 2.81712 17 - -
5804 1.38629 1.38629 1.38629 1.38629
5805 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5806 18 3.41682 0.13217 3.46697 2.81712 18 - -
5807 1.38629 1.38629 1.38629 1.38629
5808 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5809 19 2.93765 3.57340 0.11874 3.47658 19 - -
5810 1.38629 1.38629 1.38629 1.38629
5811 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5812 20 0.14377 3.36613 2.79274 3.26646 20 - -
5813 1.38629 1.38629 1.38629 1.38629
5814 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5815 21 2.93765 3.57340 0.11874 3.47658 21 - -
5816 1.38629 1.38629 1.38629 1.38629
5817 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5818 22 2.93765 3.57340 0.11874 3.47658 22 - -
5819 1.38629 1.38629 1.38629 1.38629
5820 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5821 23 3.41682 0.13217 3.46697 2.81712 23 - -
5822 1.38629 1.38629 1.38629 1.38629
5823 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5824 24 3.41682 0.13217 3.46697 2.81712 24 - -
5825 1.38629 1.38629 1.38629 1.38629
5826 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5827 25 0.14377 3.36613 2.79274 3.26646 25 - -
5828 1.38629 1.38629 1.38629 1.38629
5829 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5830 26 3.41682 0.13217 3.46697 2.81712 26 - -
5831 1.38629 1.38629 1.38629 1.38629
5832 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5833 27 2.93765 3.57340 0.11874 3.47658 27 - -
5834 1.38629 1.38629 1.38629 1.38629
5835 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5836 28 3.41682 0.13217 3.46697 2.81712 28 - -
5837 1.38629 1.38629 1.38629 1.38629
5838 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5839 29 3.41682 0.13217 3.46697 2.81712 29 - -
5840 1.38629 1.38629 1.38629 1.38629
5841 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5842 30 3.41682 0.13217 3.46697 2.81712 30 - -
5843 1.38629 1.38629 1.38629 1.38629
5844 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5845 31 2.93765 3.57340 0.11874 3.47658 31 - -
5846 1.38629 1.38629 1.38629 1.38629
5847 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5848 32 3.07437 2.58608 3.12307 0.18099 32 - -
5849 1.38629 1.38629 1.38629 1.38629
5850 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5851 33 3.41682 0.13217 3.46697 2.81712 33 - -
5852 1.38629 1.38629 1.38629 1.38629
5853 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5854 34 3.07437 2.58608 3.12307 0.18099 34 - -
5855 1.38629 1.38629 1.38629 1.38629
5856 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5857 35 2.93765 3.57340 0.11874 3.47658 35 - -
5858 1.38629 1.38629 1.38629 1.38629
5859 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5860 36 0.14377 3.36613 2.79274 3.26646 36 - -
5861 1.38629 1.38629 1.38629 1.38629
5862 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5863 37 2.93765 3.57340 0.11874 3.47658 37 - -
5864 1.38629 1.38629 1.38629 1.38629
5865 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5866 38 2.93765 3.57340 0.11874 3.47658 38 - -
5867 1.38629 1.38629 1.38629 1.38629
5868 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5869 39 2.93765 3.57340 0.11874 3.47658 39 - -
5870 1.38629 1.38629 1.38629 1.38629
5871 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5872 40 3.07437 2.58608 3.12307 0.18099 40 - -
5873 1.38629 1.38629 1.38629 1.38629
5874 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5875 41 3.41682 0.13217 3.46697 2.81712 41 - -
5876 1.38629 1.38629 1.38629 1.38629
5877 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5878 42 2.93765 3.57340 0.11874 3.47658 42 - -
5879 1.38629 1.38629 1.38629 1.38629
5880 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5881 43 2.93765 3.57340 0.11874 3.47658 43 - -
5882 1.38629 1.38629 1.38629 1.38629
5883 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5884 44 3.41682 0.13217 3.46697 2.81712 44 - -
5885 1.38629 1.38629 1.38629 1.38629
5886 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547
5887 45 0.83989 2.50807 0.93487 2.36258 45 - -
5888 1.38629 1.38629 1.38629 1.38629
5889 0.01877 3.98506 * 1.46634 0.26236 0.00000 *
5890 //
5891 HMMER3/b [3.0 | March 2010]
5892 NAME 3_End_Metazoa_58S_end_fortyonem_long
5893 LENG 45
5894 ALPH DNA
5895 RF no
5896 CS no
5897 MAP yes
5898 DATE Sat Feb 25 14:47:14 2012
5899 NSEQ 15
5900 EFFN 3.101807
5901 CKSUM 122630504
5902 STATS LOCAL MSV -8.1264 0.71934
5903 STATS LOCAL VITERBI -7.7491 0.71934
5904 STATS LOCAL FORWARD -3.9428 0.71934
5905 HMM A C G T
5906 m->m m->i m->d i->m i->i d->m d->d
5907 COMPO 2.04999 1.15617 1.04738 1.58125
5908 1.38629 1.38629 1.38629 1.38629
5909 0.03845 3.97063 3.97063 1.46634 0.26236 0.00000 *
5910 1 3.34837 0.14079 3.40133 2.76688 1 - -
5911 1.38629 1.38629 1.38629 1.38629
5912 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5913 2 2.89562 3.51276 0.12571 3.40979 2 - -
5914 1.38629 1.38629 1.38629 1.38629
5915 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5916 3 2.89562 3.51276 0.12571 3.40979 3 - -
5917 1.38629 1.38629 1.38629 1.38629
5918 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5919 4 3.34837 0.14079 3.40133 2.76688 4 - -
5920 1.38629 1.38629 1.38629 1.38629
5921 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5922 5 3.34837 0.14079 3.40133 2.76688 5 - -
5923 1.38629 1.38629 1.38629 1.38629
5924 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5925 6 3.01512 2.54827 3.06606 0.19099 6 - -
5926 1.38629 1.38629 1.38629 1.38629
5927 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5928 7 3.34837 0.14079 3.40133 2.76688 7 - -
5929 1.38629 1.38629 1.38629 1.38629
5930 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5931 8 2.89562 3.51276 0.12571 3.40979 8 - -
5932 1.38629 1.38629 1.38629 1.38629
5933 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5934 9 2.89562 3.51276 0.12571 3.40979 9 - -
5935 1.38629 1.38629 1.38629 1.38629
5936 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5937 10 2.89562 3.51276 0.12571 3.40979 10 - -
5938 1.38629 1.38629 1.38629 1.38629
5939 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5940 11 3.01512 2.54827 3.06606 0.19099 11 - -
5941 1.38629 1.38629 1.38629 1.38629
5942 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5943 12 3.34837 0.14079 3.40133 2.76688 12 - -
5944 1.38629 1.38629 1.38629 1.38629
5945 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5946 13 0.15198 3.30687 2.75398 3.20169 13 - -
5947 1.38629 1.38629 1.38629 1.38629
5948 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5949 14 0.15198 3.30687 2.75398 3.20169 14 - -
5950 1.38629 1.38629 1.38629 1.38629
5951 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5952 15 3.01512 2.54827 3.06606 0.19099 15 - -
5953 1.38629 1.38629 1.38629 1.38629
5954 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5955 16 3.34837 0.14079 3.40133 2.76688 16 - -
5956 1.38629 1.38629 1.38629 1.38629
5957 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5958 17 3.34837 0.14079 3.40133 2.76688 17 - -
5959 1.38629 1.38629 1.38629 1.38629
5960 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5961 18 3.34837 0.14079 3.40133 2.76688 18 - -
5962 1.38629 1.38629 1.38629 1.38629
5963 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5964 19 2.89562 3.51276 0.12571 3.40979 19 - -
5965 1.38629 1.38629 1.38629 1.38629
5966 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5967 20 2.89562 3.51276 0.12571 3.40979 20 - -
5968 1.38629 1.38629 1.38629 1.38629
5969 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5970 21 2.89562 3.51276 0.12571 3.40979 21 - -
5971 1.38629 1.38629 1.38629 1.38629
5972 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5973 22 2.89562 3.51276 0.12571 3.40979 22 - -
5974 1.38629 1.38629 1.38629 1.38629
5975 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5976 23 3.34837 0.14079 3.40133 2.76688 23 - -
5977 1.38629 1.38629 1.38629 1.38629
5978 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5979 24 3.34837 0.14079 3.40133 2.76688 24 - -
5980 1.38629 1.38629 1.38629 1.38629
5981 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5982 25 0.15198 3.30687 2.75398 3.20169 25 - -
5983 1.38629 1.38629 1.38629 1.38629
5984 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5985 26 3.34837 0.14079 3.40133 2.76688 26 - -
5986 1.38629 1.38629 1.38629 1.38629
5987 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5988 27 2.89562 3.51276 0.12571 3.40979 27 - -
5989 1.38629 1.38629 1.38629 1.38629
5990 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5991 28 3.01512 2.54827 3.06606 0.19099 28 - -
5992 1.38629 1.38629 1.38629 1.38629
5993 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5994 29 3.34837 0.14079 3.40133 2.76688 29 - -
5995 1.38629 1.38629 1.38629 1.38629
5996 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
5997 30 3.34837 0.14079 3.40133 2.76688 30 - -
5998 1.38629 1.38629 1.38629 1.38629
5999 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6000 31 2.89562 3.51276 0.12571 3.40979 31 - -
6001 1.38629 1.38629 1.38629 1.38629
6002 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6003 32 3.01512 2.54827 3.06606 0.19099 32 - -
6004 1.38629 1.38629 1.38629 1.38629
6005 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6006 33 3.34837 0.14079 3.40133 2.76688 33 - -
6007 1.38629 1.38629 1.38629 1.38629
6008 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6009 34 3.01512 2.54827 3.06606 0.19099 34 - -
6010 1.38629 1.38629 1.38629 1.38629
6011 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6012 35 2.89562 3.51276 0.12571 3.40979 35 - -
6013 1.38629 1.38629 1.38629 1.38629
6014 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6015 36 0.15198 3.30687 2.75398 3.20169 36 - -
6016 1.38629 1.38629 1.38629 1.38629
6017 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6018 37 2.89562 3.51276 0.12571 3.40979 37 - -
6019 1.38629 1.38629 1.38629 1.38629
6020 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6021 38 2.89562 3.51276 0.12571 3.40979 38 - -
6022 1.38629 1.38629 1.38629 1.38629
6023 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6024 39 2.89562 3.51276 0.12571 3.40979 39 - -
6025 1.38629 1.38629 1.38629 1.38629
6026 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6027 40 3.01512 2.54827 3.06606 0.19099 40 - -
6028 1.38629 1.38629 1.38629 1.38629
6029 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6030 41 3.34837 0.14079 3.40133 2.76688 41 - -
6031 1.38629 1.38629 1.38629 1.38629
6032 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6033 42 2.89562 3.51276 0.12571 3.40979 42 - -
6034 1.38629 1.38629 1.38629 1.38629
6035 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6036 43 2.89562 3.51276 0.12571 3.40979 43 - -
6037 1.38629 1.38629 1.38629 1.38629
6038 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6039 44 3.01512 2.54827 3.06606 0.19099 44 - -
6040 1.38629 1.38629 1.38629 1.38629
6041 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547
6042 45 3.01512 2.54827 3.06606 0.19099 45 - -
6043 1.38629 1.38629 1.38629 1.38629
6044 0.01941 3.95159 * 1.46634 0.26236 0.00000 *
6045 //
6046 HMMER3/b [3.0 | March 2010]
6047 NAME 3_End_Metazoa_58S_end_fortyonen_long
6048 LENG 45
6049 ALPH DNA
6050 RF no
6051 CS no
6052 MAP yes
6053 DATE Sat Feb 25 14:47:19 2012
6054 NSEQ 14
6055 EFFN 3.496582
6056 CKSUM 454827207
6057 STATS LOCAL MSV -7.1258 0.71933
6058 STATS LOCAL VITERBI -7.6320 0.71933
6059 STATS LOCAL FORWARD -4.0437 0.71933
6060 HMM A C G T
6061 m->m m->i m->d i->m i->i d->m d->d
6062 COMPO 2.07348 1.02582 1.07126 1.75347
6063 1.38629 1.38629 1.38629 1.38629
6064 0.03574 4.04245 4.04245 1.46634 0.26236 0.00000 *
6065 1 3.49533 0.12303 3.54211 2.87408 1 - -
6066 1.38629 1.38629 1.38629 1.38629
6067 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6068 2 2.98489 3.64235 0.11136 3.55276 2 - -
6069 1.38629 1.38629 1.38629 1.38629
6070 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6071 3 2.98489 3.64235 0.11136 3.55276 3 - -
6072 1.38629 1.38629 1.38629 1.38629
6073 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6074 4 3.49533 0.12303 3.54211 2.87408 4 - -
6075 1.38629 1.38629 1.38629 1.38629
6076 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6077 5 2.78530 1.85386 2.84503 0.32362 5 - -
6078 1.38629 1.38629 1.38629 1.38629
6079 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6080 6 3.49533 0.12303 3.54211 2.87408 6 - -
6081 1.38629 1.38629 1.38629 1.38629
6082 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6083 7 2.56878 1.42220 2.63576 0.49344 7 - -
6084 1.38629 1.38629 1.38629 1.38629
6085 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6086 8 2.98489 3.64235 0.11136 3.55276 8 - -
6087 1.38629 1.38629 1.38629 1.38629
6088 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6089 9 2.98489 3.64235 0.11136 3.55276 9 - -
6090 1.38629 1.38629 1.38629 1.38629
6091 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6092 10 3.49533 0.12303 3.54211 2.87408 10 - -
6093 1.38629 1.38629 1.38629 1.38629
6094 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6095 11 3.14355 2.63004 3.18959 0.17007 11 - -
6096 1.38629 1.38629 1.38629 1.38629
6097 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6098 12 3.49533 0.12303 3.54211 2.87408 12 - -
6099 1.38629 1.38629 1.38629 1.38629
6100 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6101 13 0.13496 3.43436 2.83695 3.34119 13 - -
6102 1.38629 1.38629 1.38629 1.38629
6103 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6104 14 3.49533 0.12303 3.54211 2.87408 14 - -
6105 1.38629 1.38629 1.38629 1.38629
6106 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6107 15 3.14355 2.63004 3.18959 0.17007 15 - -
6108 1.38629 1.38629 1.38629 1.38629
6109 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6110 16 2.98489 3.64235 0.11136 3.55276 16 - -
6111 1.38629 1.38629 1.38629 1.38629
6112 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6113 17 3.49533 0.12303 3.54211 2.87408 17 - -
6114 1.38629 1.38629 1.38629 1.38629
6115 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6116 18 3.49533 0.12303 3.54211 2.87408 18 - -
6117 1.38629 1.38629 1.38629 1.38629
6118 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6119 19 0.46429 2.70804 1.47690 2.57173 19 - -
6120 1.38629 1.38629 1.38629 1.38629
6121 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6122 20 2.98489 3.64235 0.11136 3.55276 20 - -
6123 1.38629 1.38629 1.38629 1.38629
6124 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6125 21 0.27794 3.00111 1.98907 2.88058 21 - -
6126 1.38629 1.38629 1.38629 1.38629
6127 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6128 22 2.98489 3.64235 0.11136 3.55276 22 - -
6129 1.38629 1.38629 1.38629 1.38629
6130 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6131 23 3.49533 0.12303 3.54211 2.87408 23 - -
6132 1.38629 1.38629 1.38629 1.38629
6133 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6134 24 3.49533 0.12303 3.54211 2.87408 24 - -
6135 1.38629 1.38629 1.38629 1.38629
6136 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6137 25 0.87142 2.18300 2.17975 1.03319 25 - -
6138 1.38629 1.38629 1.38629 1.38629
6139 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6140 26 3.49533 0.12303 3.54211 2.87408 26 - -
6141 1.38629 1.38629 1.38629 1.38629
6142 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6143 27 2.98489 3.64235 0.11136 3.55276 27 - -
6144 1.38629 1.38629 1.38629 1.38629
6145 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6146 28 3.49533 0.12303 3.54211 2.87408 28 - -
6147 1.38629 1.38629 1.38629 1.38629
6148 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6149 29 3.49533 0.12303 3.54211 2.87408 29 - -
6150 1.38629 1.38629 1.38629 1.38629
6151 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6152 30 3.14355 2.63004 3.18959 0.17007 30 - -
6153 1.38629 1.38629 1.38629 1.38629
6154 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6155 31 2.98489 3.64235 0.11136 3.55276 31 - -
6156 1.38629 1.38629 1.38629 1.38629
6157 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6158 32 3.14355 2.63004 3.18959 0.17007 32 - -
6159 1.38629 1.38629 1.38629 1.38629
6160 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6161 33 3.49533 0.12303 3.54211 2.87408 33 - -
6162 1.38629 1.38629 1.38629 1.38629
6163 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6164 34 3.49533 0.12303 3.54211 2.87408 34 - -
6165 1.38629 1.38629 1.38629 1.38629
6166 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6167 35 2.98489 3.64235 0.11136 3.55276 35 - -
6168 1.38629 1.38629 1.38629 1.38629
6169 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6170 36 0.13496 3.43436 2.83695 3.34119 36 - -
6171 1.38629 1.38629 1.38629 1.38629
6172 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6173 37 2.98489 3.64235 0.11136 3.55276 37 - -
6174 1.38629 1.38629 1.38629 1.38629
6175 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6176 38 2.98489 3.64235 0.11136 3.55276 38 - -
6177 1.38629 1.38629 1.38629 1.38629
6178 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6179 39 2.98489 3.64235 0.11136 3.55276 39 - -
6180 1.38629 1.38629 1.38629 1.38629
6181 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6182 40 3.14355 2.63004 3.18959 0.17007 40 - -
6183 1.38629 1.38629 1.38629 1.38629
6184 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6185 41 3.49533 0.12303 3.54211 2.87408 41 - -
6186 1.38629 1.38629 1.38629 1.38629
6187 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6188 42 2.98489 3.64235 0.11136 3.55276 42 - -
6189 1.38629 1.38629 1.38629 1.38629
6190 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6191 43 2.98489 3.64235 0.11136 3.55276 43 - -
6192 1.38629 1.38629 1.38629 1.38629
6193 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6194 44 3.49533 0.12303 3.54211 2.87408 44 - -
6195 1.38629 1.38629 1.38629 1.38629
6196 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
6197 45 2.98489 3.64235 0.11136 3.55276 45 - -
6198 1.38629 1.38629 1.38629 1.38629
6199 0.01803 4.02474 * 1.46634 0.26236 0.00000 *
6200 //
6201 HMMER3/b [3.0 | March 2010]
6202 NAME 3_End_Metazoa_58S_end_fortyoneo_long
6203 LENG 45
6204 ALPH DNA
6205 RF no
6206 CS no
6207 MAP yes
6208 DATE Sat Feb 25 14:47:23 2012
6209 NSEQ 24
6210 EFFN 3.477539
6211 CKSUM 2321990089
6212 STATS LOCAL MSV -7.2176 0.71931
6213 STATS LOCAL VITERBI -7.8215 0.71931
6214 STATS LOCAL FORWARD -3.6009 0.71931
6215 HMM A C G T
6216 m->m m->i m->d i->m i->i d->m d->d
6217 COMPO 2.02877 1.12529 1.08171 1.58510
6218 1.38629 1.38629 1.38629 1.38629
6219 0.03586 4.03910 4.03910 1.46634 0.26236 0.00000 *
6220 1 2.98094 3.63655 0.11196 3.54635 1 - -
6221 1.38629 1.38629 1.38629 1.38629
6222 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6223 2 3.48870 0.12377 3.53577 2.86929 2 - -
6224 1.38629 1.38629 1.38629 1.38629
6225 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6226 3 2.98094 3.63655 0.11196 3.54635 3 - -
6227 1.38629 1.38629 1.38629 1.38629
6228 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6229 4 2.98094 3.63655 0.11196 3.54635 4 - -
6230 1.38629 1.38629 1.38629 1.38629
6231 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6232 5 3.48870 0.12377 3.53577 2.86929 5 - -
6233 1.38629 1.38629 1.38629 1.38629
6234 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6235 6 3.48870 0.12377 3.53577 2.86929 6 - -
6236 1.38629 1.38629 1.38629 1.38629
6237 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6238 7 3.13765 2.62630 3.18392 0.17097 7 - -
6239 1.38629 1.38629 1.38629 1.38629
6240 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6241 8 3.48870 0.12377 3.53577 2.86929 8 - -
6242 1.38629 1.38629 1.38629 1.38629
6243 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6244 9 2.98094 3.63655 0.11196 3.54635 9 - -
6245 1.38629 1.38629 1.38629 1.38629
6246 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6247 10 2.98094 3.63655 0.11196 3.54635 10 - -
6248 1.38629 1.38629 1.38629 1.38629
6249 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6250 11 2.98094 3.63655 0.11196 3.54635 11 - -
6251 1.38629 1.38629 1.38629 1.38629
6252 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6253 12 2.48121 1.20688 2.55094 0.61763 12 - -
6254 1.38629 1.38629 1.38629 1.38629
6255 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6256 13 0.13568 3.42858 2.83322 3.33486 13 - -
6257 1.38629 1.38629 1.38629 1.38629
6258 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6259 14 1.44121 1.61091 2.13965 0.80754 14 - -
6260 1.38629 1.38629 1.38629 1.38629
6261 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6262 15 3.13765 2.62630 3.18392 0.17097 15 - -
6263 1.38629 1.38629 1.38629 1.38629
6264 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6265 16 3.48870 0.12377 3.53577 2.86929 16 - -
6266 1.38629 1.38629 1.38629 1.38629
6267 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6268 17 3.48870 0.12377 3.53577 2.86929 17 - -
6269 1.38629 1.38629 1.38629 1.38629
6270 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6271 18 3.48870 0.12377 3.53577 2.86929 18 - -
6272 1.38629 1.38629 1.38629 1.38629
6273 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6274 19 2.98094 3.63655 0.11196 3.54635 19 - -
6275 1.38629 1.38629 1.38629 1.38629
6276 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6277 20 0.13568 3.42858 2.83322 3.33486 20 - -
6278 1.38629 1.38629 1.38629 1.38629
6279 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6280 21 2.98094 3.63655 0.11196 3.54635 21 - -
6281 1.38629 1.38629 1.38629 1.38629
6282 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6283 22 2.98094 3.63655 0.11196 3.54635 22 - -
6284 1.38629 1.38629 1.38629 1.38629
6285 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6286 23 3.48870 0.12377 3.53577 2.86929 23 - -
6287 1.38629 1.38629 1.38629 1.38629
6288 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6289 24 3.48870 0.12377 3.53577 2.86929 24 - -
6290 1.38629 1.38629 1.38629 1.38629
6291 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6292 25 0.13568 3.42858 2.83322 3.33486 25 - -
6293 1.38629 1.38629 1.38629 1.38629
6294 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6295 26 2.42167 0.25236 2.92944 2.51535 26 - -
6296 1.38629 1.38629 1.38629 1.38629
6297 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6298 27 2.98094 3.63655 0.11196 3.54635 27 - -
6299 1.38629 1.38629 1.38629 1.38629
6300 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6301 28 3.48870 0.12377 3.53577 2.86929 28 - -
6302 1.38629 1.38629 1.38629 1.38629
6303 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6304 29 3.48870 0.12377 3.53577 2.86929 29 - -
6305 1.38629 1.38629 1.38629 1.38629
6306 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6307 30 2.75701 1.80810 2.81769 0.33854 30 - -
6308 1.38629 1.38629 1.38629 1.38629
6309 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6310 31 2.98094 3.63655 0.11196 3.54635 31 - -
6311 1.38629 1.38629 1.38629 1.38629
6312 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6313 32 3.13765 2.62630 3.18392 0.17097 32 - -
6314 1.38629 1.38629 1.38629 1.38629
6315 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6316 33 3.48870 0.12377 3.53577 2.86929 33 - -
6317 1.38629 1.38629 1.38629 1.38629
6318 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6319 34 3.13765 2.62630 3.18392 0.17097 34 - -
6320 1.38629 1.38629 1.38629 1.38629
6321 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6322 35 3.48870 0.12377 3.53577 2.86929 35 - -
6323 1.38629 1.38629 1.38629 1.38629
6324 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6325 36 0.13568 3.42858 2.83322 3.33486 36 - -
6326 1.38629 1.38629 1.38629 1.38629
6327 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6328 37 2.98094 3.63655 0.11196 3.54635 37 - -
6329 1.38629 1.38629 1.38629 1.38629
6330 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6331 38 2.98094 3.63655 0.11196 3.54635 38 - -
6332 1.38629 1.38629 1.38629 1.38629
6333 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6334 39 2.98094 3.63655 0.11196 3.54635 39 - -
6335 1.38629 1.38629 1.38629 1.38629
6336 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6337 40 3.13765 2.62630 3.18392 0.17097 40 - -
6338 1.38629 1.38629 1.38629 1.38629
6339 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6340 41 3.48870 0.12377 3.53577 2.86929 41 - -
6341 1.38629 1.38629 1.38629 1.38629
6342 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6343 42 2.98094 3.63655 0.11196 3.54635 42 - -
6344 1.38629 1.38629 1.38629 1.38629
6345 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6346 43 2.98094 3.63655 0.11196 3.54635 43 - -
6347 1.38629 1.38629 1.38629 1.38629
6348 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6349 44 3.13765 2.62630 3.18392 0.17097 44 - -
6350 1.38629 1.38629 1.38629 1.38629
6351 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
6352 45 3.13765 2.62630 3.18392 0.17097 45 - -
6353 1.38629 1.38629 1.38629 1.38629
6354 0.01809 4.02133 * 1.46634 0.26236 0.00000 *
6355 //
6356 HMMER3/b [3.0 | March 2010]
6357 NAME 3_End_Metazoa_58S_end_fortyonep_long
6358 LENG 45
6359 ALPH DNA
6360 RF no
6361 CS no
6362 MAP yes
6363 DATE Sat Feb 25 14:47:28 2012
6364 NSEQ 2
6365 EFFN 2.000000
6366 CKSUM 488441447
6367 STATS LOCAL MSV -7.4471 0.72733
6368 STATS LOCAL VITERBI -8.3499 0.72733
6369 STATS LOCAL FORWARD -3.0393 0.72733
6370 HMM A C G T
6371 m->m m->i m->d i->m i->i d->m d->d
6372 COMPO 1.75073 1.10536 1.22053 1.60851
6373 1.38629 1.38629 1.38629 1.38629
6374 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
6375 1 2.53331 3.02441 0.20344 2.88069 1 - -
6376 1.38629 1.38629 1.38629 1.38629
6377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6378 2 2.81865 0.23582 2.88868 2.35662 2 - -
6379 1.38629 1.38629 1.38629 1.38629
6380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6381 3 2.53331 3.02441 0.20344 2.88069 3 - -
6382 1.38629 1.38629 1.38629 1.38629
6383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6384 4 2.53331 3.02441 0.20344 2.88069 4 - -
6385 1.38629 1.38629 1.38629 1.38629
6386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6387 5 2.81865 0.23582 2.88868 2.35662 5 - -
6388 1.38629 1.38629 1.38629 1.38629
6389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6390 6 0.23862 2.84929 2.43386 2.70756 6 - -
6391 1.38629 1.38629 1.38629 1.38629
6392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6393 7 2.57915 2.25909 2.64442 0.28946 7 - -
6394 1.38629 1.38629 1.38629 1.38629
6395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6396 8 2.81865 0.23582 2.88868 2.35662 8 - -
6397 1.38629 1.38629 1.38629 1.38629
6398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6399 9 2.53331 3.02441 0.20344 2.88069 9 - -
6400 1.38629 1.38629 1.38629 1.38629
6401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6402 10 2.53331 3.02441 0.20344 2.88069 10 - -
6403 1.38629 1.38629 1.38629 1.38629
6404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6405 11 2.81865 0.23582 2.88868 2.35662 11 - -
6406 1.38629 1.38629 1.38629 1.38629
6407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6408 12 2.81865 0.23582 2.88868 2.35662 12 - -
6409 1.38629 1.38629 1.38629 1.38629
6410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6411 13 2.81865 0.23582 2.88868 2.35662 13 - -
6412 1.38629 1.38629 1.38629 1.38629
6413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6414 14 0.23862 2.84929 2.43386 2.70756 14 - -
6415 1.38629 1.38629 1.38629 1.38629
6416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6417 15 2.81865 0.23582 2.88868 2.35662 15 - -
6418 1.38629 1.38629 1.38629 1.38629
6419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6420 16 0.23862 2.84929 2.43386 2.70756 16 - -
6421 1.38629 1.38629 1.38629 1.38629
6422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6423 17 2.81865 0.23582 2.88868 2.35662 17 - -
6424 1.38629 1.38629 1.38629 1.38629
6425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6426 18 2.81865 0.23582 2.88868 2.35662 18 - -
6427 1.38629 1.38629 1.38629 1.38629
6428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6429 19 2.53331 3.02441 0.20344 2.88069 19 - -
6430 1.38629 1.38629 1.38629 1.38629
6431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6432 20 0.23862 2.84929 2.43386 2.70756 20 - -
6433 1.38629 1.38629 1.38629 1.38629
6434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6435 21 2.57915 2.25909 2.64442 0.28946 21 - -
6436 1.38629 1.38629 1.38629 1.38629
6437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6438 22 2.53331 3.02441 0.20344 2.88069 22 - -
6439 1.38629 1.38629 1.38629 1.38629
6440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6441 23 2.81865 0.23582 2.88868 2.35662 23 - -
6442 1.38629 1.38629 1.38629 1.38629
6443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6444 24 2.81865 0.23582 2.88868 2.35662 24 - -
6445 1.38629 1.38629 1.38629 1.38629
6446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6447 25 0.23862 2.84929 2.43386 2.70756 25 - -
6448 1.38629 1.38629 1.38629 1.38629
6449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6450 26 2.81865 0.23582 2.88868 2.35662 26 - -
6451 1.38629 1.38629 1.38629 1.38629
6452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6453 27 2.53331 3.02441 0.20344 2.88069 27 - -
6454 1.38629 1.38629 1.38629 1.38629
6455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6456 28 2.81865 0.23582 2.88868 2.35662 28 - -
6457 1.38629 1.38629 1.38629 1.38629
6458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6459 29 2.81865 0.23582 2.88868 2.35662 29 - -
6460 1.38629 1.38629 1.38629 1.38629
6461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6462 30 2.57915 2.25909 2.64442 0.28946 30 - -
6463 1.38629 1.38629 1.38629 1.38629
6464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6465 31 2.53331 3.02441 0.20344 2.88069 31 - -
6466 1.38629 1.38629 1.38629 1.38629
6467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6468 32 2.57915 2.25909 2.64442 0.28946 32 - -
6469 1.38629 1.38629 1.38629 1.38629
6470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6471 33 2.81865 0.23582 2.88868 2.35662 33 - -
6472 1.38629 1.38629 1.38629 1.38629
6473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6474 34 2.57915 2.25909 2.64442 0.28946 34 - -
6475 1.38629 1.38629 1.38629 1.38629
6476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6477 35 2.81865 0.23582 2.88868 2.35662 35 - -
6478 1.38629 1.38629 1.38629 1.38629
6479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6480 36 0.23862 2.84929 2.43386 2.70756 36 - -
6481 1.38629 1.38629 1.38629 1.38629
6482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6483 37 2.53331 3.02441 0.20344 2.88069 37 - -
6484 1.38629 1.38629 1.38629 1.38629
6485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6486 38 2.53331 3.02441 0.20344 2.88069 38 - -
6487 1.38629 1.38629 1.38629 1.38629
6488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6489 39 2.53331 3.02441 0.20344 2.88069 39 - -
6490 1.38629 1.38629 1.38629 1.38629
6491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6492 40 2.57915 2.25909 2.64442 0.28946 40 - -
6493 1.38629 1.38629 1.38629 1.38629
6494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6495 41 2.81865 0.23582 2.88868 2.35662 41 - -
6496 1.38629 1.38629 1.38629 1.38629
6497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6498 42 2.53331 3.02441 0.20344 2.88069 42 - -
6499 1.38629 1.38629 1.38629 1.38629
6500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6501 43 2.53331 3.02441 0.20344 2.88069 43 - -
6502 1.38629 1.38629 1.38629 1.38629
6503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6504 44 2.57915 2.25909 2.64442 0.28946 44 - -
6505 1.38629 1.38629 1.38629 1.38629
6506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6507 45 2.57915 2.25909 2.64442 0.28946 45 - -
6508 1.38629 1.38629 1.38629 1.38629
6509 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
6510 //
6511 HMMER3/b [3.0 | March 2010]
6512 NAME 3_End_Metazoa_58S_end_fortyoneq_long
6513 LENG 45
6514 ALPH DNA
6515 RF no
6516 CS no
6517 MAP yes
6518 DATE Sat Feb 25 14:47:35 2012
6519 NSEQ 13
6520 EFFN 3.380127
6521 CKSUM 962922846
6522 STATS LOCAL MSV -7.3474 0.71932
6523 STATS LOCAL VITERBI -7.7040 0.71932
6524 STATS LOCAL FORWARD -3.8646 0.71932
6525 HMM A C G T
6526 m->m m->i m->d i->m i->i d->m d->d
6527 COMPO 2.04819 1.08537 1.24545 1.40469
6528 1.38629 1.38629 1.38629 1.38629
6529 0.03650 4.02180 4.02180 1.46634 0.26236 0.00000 *
6530 1 2.96019 3.60621 0.11516 3.51280 1 - -
6531 1.38629 1.38629 1.38629 1.38629
6532 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6533 2 3.45409 0.12773 3.50265 2.84425 2 - -
6534 1.38629 1.38629 1.38629 1.38629
6535 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6536 3 2.96019 3.60621 0.11516 3.51280 3 - -
6537 1.38629 1.38629 1.38629 1.38629
6538 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6539 4 2.96019 3.60621 0.11516 3.51280 4 - -
6540 1.38629 1.38629 1.38629 1.38629
6541 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6542 5 3.45409 0.12773 3.50265 2.84425 5 - -
6543 1.38629 1.38629 1.38629 1.38629
6544 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6545 6 0.13951 3.39848 2.81374 3.30187 6 - -
6546 1.38629 1.38629 1.38629 1.38629
6547 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6548 7 3.10704 2.60685 3.15448 0.17574 7 - -
6549 1.38629 1.38629 1.38629 1.38629
6550 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6551 8 3.45409 0.12773 3.50265 2.84425 8 - -
6552 1.38629 1.38629 1.38629 1.38629
6553 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6554 9 2.96019 3.60621 0.11516 3.51280 9 - -
6555 1.38629 1.38629 1.38629 1.38629
6556 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6557 10 2.96019 3.60621 0.11516 3.51280 10 - -
6558 1.38629 1.38629 1.38629 1.38629
6559 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6560 11 3.45409 0.12773 3.50265 2.84425 11 - -
6561 1.38629 1.38629 1.38629 1.38629
6562 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6563 12 3.10704 2.60685 3.15448 0.17574 12 - -
6564 1.38629 1.38629 1.38629 1.38629
6565 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6566 13 3.10704 2.60685 3.15448 0.17574 13 - -
6567 1.38629 1.38629 1.38629 1.38629
6568 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6569 14 3.45409 0.12773 3.50265 2.84425 14 - -
6570 1.38629 1.38629 1.38629 1.38629
6571 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6572 15 3.45409 0.12773 3.50265 2.84425 15 - -
6573 1.38629 1.38629 1.38629 1.38629
6574 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6575 16 0.13951 3.39848 2.81374 3.30187 16 - -
6576 1.38629 1.38629 1.38629 1.38629
6577 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6578 17 3.45409 0.12773 3.50265 2.84425 17 - -
6579 1.38629 1.38629 1.38629 1.38629
6580 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6581 18 3.45409 0.12773 3.50265 2.84425 18 - -
6582 1.38629 1.38629 1.38629 1.38629
6583 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6584 19 2.96019 3.60621 0.11516 3.51280 19 - -
6585 1.38629 1.38629 1.38629 1.38629
6586 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6587 20 1.84363 2.30298 2.50331 0.41554 20 - -
6588 1.38629 1.38629 1.38629 1.38629
6589 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6590 21 3.10704 2.60685 3.15448 0.17574 21 - -
6591 1.38629 1.38629 1.38629 1.38629
6592 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6593 22 2.96019 3.60621 0.11516 3.51280 22 - -
6594 1.38629 1.38629 1.38629 1.38629
6595 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6596 23 3.45409 0.12773 3.50265 2.84425 23 - -
6597 1.38629 1.38629 1.38629 1.38629
6598 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6599 24 3.45409 0.12773 3.50265 2.84425 24 - -
6600 1.38629 1.38629 1.38629 1.38629
6601 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6602 25 0.13951 3.39848 2.81374 3.30187 25 - -
6603 1.38629 1.38629 1.38629 1.38629
6604 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6605 26 3.45409 0.12773 3.50265 2.84425 26 - -
6606 1.38629 1.38629 1.38629 1.38629
6607 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6608 27 2.96019 3.60621 0.11516 3.51280 27 - -
6609 1.38629 1.38629 1.38629 1.38629
6610 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6611 28 3.45409 0.12773 3.50265 2.84425 28 - -
6612 1.38629 1.38629 1.38629 1.38629
6613 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6614 29 3.45409 0.12773 3.50265 2.84425 29 - -
6615 1.38629 1.38629 1.38629 1.38629
6616 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6617 30 3.10704 2.60685 3.15448 0.17574 30 - -
6618 1.38629 1.38629 1.38629 1.38629
6619 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6620 31 2.96019 3.60621 0.11516 3.51280 31 - -
6621 1.38629 1.38629 1.38629 1.38629
6622 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6623 32 3.10704 2.60685 3.15448 0.17574 32 - -
6624 1.38629 1.38629 1.38629 1.38629
6625 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6626 33 3.45409 0.12773 3.50265 2.84425 33 - -
6627 1.38629 1.38629 1.38629 1.38629
6628 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6629 34 3.10704 2.60685 3.15448 0.17574 34 - -
6630 1.38629 1.38629 1.38629 1.38629
6631 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6632 35 3.45409 0.12773 3.50265 2.84425 35 - -
6633 1.38629 1.38629 1.38629 1.38629
6634 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6635 36 0.13951 3.39848 2.81374 3.30187 36 - -
6636 1.38629 1.38629 1.38629 1.38629
6637 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6638 37 2.96019 3.60621 0.11516 3.51280 37 - -
6639 1.38629 1.38629 1.38629 1.38629
6640 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6641 38 2.96019 3.60621 0.11516 3.51280 38 - -
6642 1.38629 1.38629 1.38629 1.38629
6643 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6644 39 2.96019 3.60621 0.11516 3.51280 39 - -
6645 1.38629 1.38629 1.38629 1.38629
6646 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6647 40 3.10704 2.60685 3.15448 0.17574 40 - -
6648 1.38629 1.38629 1.38629 1.38629
6649 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6650 41 3.45409 0.12773 3.50265 2.84425 41 - -
6651 1.38629 1.38629 1.38629 1.38629
6652 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6653 42 2.96019 3.60621 0.11516 3.51280 42 - -
6654 1.38629 1.38629 1.38629 1.38629
6655 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6656 43 2.20232 2.18081 1.41085 0.63005 43 - -
6657 1.38629 1.38629 1.38629 1.38629
6658 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6659 44 3.10704 2.60685 3.15448 0.17574 44 - -
6660 1.38629 1.38629 1.38629 1.38629
6661 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547
6662 45 3.10704 2.60685 3.15448 0.17574 45 - -
6663 1.38629 1.38629 1.38629 1.38629
6664 0.01842 4.00371 * 1.46634 0.26236 0.00000 *
6665 //
6666 HMMER3/b [3.0 | March 2010]
6667 NAME 3_End_Metazoa_58S_end_fortyoner_long
6668 LENG 45
6669 ALPH DNA
6670 RF no
6671 CS no
6672 MAP yes
6673 DATE Sat Feb 25 14:47:41 2012
6674 NSEQ 6
6675 EFFN 3.284180
6676 CKSUM 1160924706
6677 STATS LOCAL MSV -8.1910 0.71932
6678 STATS LOCAL VITERBI -7.7546 0.71932
6679 STATS LOCAL FORWARD -4.1572 0.71932
6680 HMM A C G T
6681 m->m m->i m->d i->m i->i d->m d->d
6682 COMPO 1.92186 1.19878 1.11086 1.50135
6683 1.38629 1.38629 1.38629 1.38629
6684 0.03715 4.00445 4.00445 1.46634 0.26236 0.00000 *
6685 1 2.93885 3.57515 0.11855 3.47852 1 - -
6686 1.38629 1.38629 1.38629 1.38629
6687 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6688 2 2.93885 3.57515 0.11855 3.47852 2 - -
6689 1.38629 1.38629 1.38629 1.38629
6690 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6691 3 3.41881 0.13193 3.46887 2.81857 3 - -
6692 1.38629 1.38629 1.38629 1.38629
6693 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6694 4 3.41881 0.13193 3.46887 2.81857 4 - -
6695 1.38629 1.38629 1.38629 1.38629
6696 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6697 5 3.07610 2.58718 3.12474 0.18071 5 - -
6698 1.38629 1.38629 1.38629 1.38629
6699 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6700 6 3.41881 0.13193 3.46887 2.81857 6 - -
6701 1.38629 1.38629 1.38629 1.38629
6702 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6703 7 3.07610 2.58718 3.12474 0.18071 7 - -
6704 1.38629 1.38629 1.38629 1.38629
6705 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6706 8 2.93885 3.57515 0.11855 3.47852 8 - -
6707 1.38629 1.38629 1.38629 1.38629
6708 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6709 9 2.93885 3.57515 0.11855 3.47852 9 - -
6710 1.38629 1.38629 1.38629 1.38629
6711 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6712 10 2.93885 3.57515 0.11855 3.47852 10 - -
6713 1.38629 1.38629 1.38629 1.38629
6714 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6715 11 3.07610 2.58718 3.12474 0.18071 11 - -
6716 1.38629 1.38629 1.38629 1.38629
6717 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6718 12 3.41881 0.13193 3.46887 2.81857 12 - -
6719 1.38629 1.38629 1.38629 1.38629
6720 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6721 13 0.14354 3.36786 2.79386 3.26835 13 - -
6722 1.38629 1.38629 1.38629 1.38629
6723 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6724 14 3.41881 0.13193 3.46887 2.81857 14 - -
6725 1.38629 1.38629 1.38629 1.38629
6726 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6727 15 3.07610 2.58718 3.12474 0.18071 15 - -
6728 1.38629 1.38629 1.38629 1.38629
6729 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6730 16 3.41881 0.13193 3.46887 2.81857 16 - -
6731 1.38629 1.38629 1.38629 1.38629
6732 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6733 17 3.41881 0.13193 3.46887 2.81857 17 - -
6734 1.38629 1.38629 1.38629 1.38629
6735 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6736 18 0.14354 3.36786 2.79386 3.26835 18 - -
6737 1.38629 1.38629 1.38629 1.38629
6738 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6739 19 2.93885 3.57515 0.11855 3.47852 19 - -
6740 1.38629 1.38629 1.38629 1.38629
6741 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6742 20 0.14354 3.36786 2.79386 3.26835 20 - -
6743 1.38629 1.38629 1.38629 1.38629
6744 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6745 21 2.93885 3.57515 0.11855 3.47852 21 - -
6746 1.38629 1.38629 1.38629 1.38629
6747 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6748 22 2.93885 3.57515 0.11855 3.47852 22 - -
6749 1.38629 1.38629 1.38629 1.38629
6750 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6751 23 3.41881 0.13193 3.46887 2.81857 23 - -
6752 1.38629 1.38629 1.38629 1.38629
6753 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6754 24 3.41881 0.13193 3.46887 2.81857 24 - -
6755 1.38629 1.38629 1.38629 1.38629
6756 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6757 25 0.14354 3.36786 2.79386 3.26835 25 - -
6758 1.38629 1.38629 1.38629 1.38629
6759 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6760 26 3.41881 0.13193 3.46887 2.81857 26 - -
6761 1.38629 1.38629 1.38629 1.38629
6762 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6763 27 2.93885 3.57515 0.11855 3.47852 27 - -
6764 1.38629 1.38629 1.38629 1.38629
6765 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6766 28 3.07610 2.58718 3.12474 0.18071 28 - -
6767 1.38629 1.38629 1.38629 1.38629
6768 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6769 29 3.41881 0.13193 3.46887 2.81857 29 - -
6770 1.38629 1.38629 1.38629 1.38629
6771 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6772 30 3.07610 2.58718 3.12474 0.18071 30 - -
6773 1.38629 1.38629 1.38629 1.38629
6774 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6775 31 2.93885 3.57515 0.11855 3.47852 31 - -
6776 1.38629 1.38629 1.38629 1.38629
6777 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6778 32 3.07610 2.58718 3.12474 0.18071 32 - -
6779 1.38629 1.38629 1.38629 1.38629
6780 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6781 33 3.41881 0.13193 3.46887 2.81857 33 - -
6782 1.38629 1.38629 1.38629 1.38629
6783 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6784 34 3.07610 2.58718 3.12474 0.18071 34 - -
6785 1.38629 1.38629 1.38629 1.38629
6786 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6787 35 2.93885 3.57515 0.11855 3.47852 35 - -
6788 1.38629 1.38629 1.38629 1.38629
6789 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6790 36 0.14354 3.36786 2.79386 3.26835 36 - -
6791 1.38629 1.38629 1.38629 1.38629
6792 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6793 37 2.93885 3.57515 0.11855 3.47852 37 - -
6794 1.38629 1.38629 1.38629 1.38629
6795 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6796 38 1.99573 3.03008 0.27322 2.90320 38 - -
6797 1.38629 1.38629 1.38629 1.38629
6798 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6799 39 2.42471 2.07135 0.34812 2.53243 39 - -
6800 1.38629 1.38629 1.38629 1.38629
6801 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6802 40 3.07610 2.58718 3.12474 0.18071 40 - -
6803 1.38629 1.38629 1.38629 1.38629
6804 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6805 41 3.41881 0.13193 3.46887 2.81857 41 - -
6806 1.38629 1.38629 1.38629 1.38629
6807 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6808 42 2.93885 3.57515 0.11855 3.47852 42 - -
6809 1.38629 1.38629 1.38629 1.38629
6810 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6811 43 2.93885 3.57515 0.11855 3.47852 43 - -
6812 1.38629 1.38629 1.38629 1.38629
6813 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6814 44 3.41881 0.13193 3.46887 2.81857 44 - -
6815 1.38629 1.38629 1.38629 1.38629
6816 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
6817 45 3.07610 2.58718 3.12474 0.18071 45 - -
6818 1.38629 1.38629 1.38629 1.38629
6819 0.01875 3.98605 * 1.46634 0.26236 0.00000 *
6820 //
6821 HMMER3/b [3.0 | March 2010]
6822 NAME 3_End_Metazoa_58S_end_fortysevena_long
6823 LENG 45
6824 ALPH DNA
6825 RF no
6826 CS no
6827 MAP yes
6828 DATE Sat Feb 25 14:50:05 2012
6829 NSEQ 15
6830 EFFN 3.409424
6831 CKSUM 1562515902
6832 STATS LOCAL MSV -7.2512 0.71932
6833 STATS LOCAL VITERBI -7.7652 0.71932
6834 STATS LOCAL FORWARD -4.0508 0.71932
6835 HMM A C G T
6836 m->m m->i m->d i->m i->i d->m d->d
6837 COMPO 1.80417 1.23325 1.19344 1.42350
6838 1.38629 1.38629 1.38629 1.38629
6839 0.03631 4.02703 4.02703 1.46634 0.26236 0.00000 *
6840 1 3.46462 0.12651 3.51274 2.85188 1 - -
6841 1.38629 1.38629 1.38629 1.38629
6842 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6843 2 2.96653 3.61546 0.11417 3.52302 2 - -
6844 1.38629 1.38629 1.38629 1.38629
6845 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6846 3 3.46462 0.12651 3.51274 2.85188 3 - -
6847 1.38629 1.38629 1.38629 1.38629
6848 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6849 4 3.11633 2.61276 3.16342 0.17427 4 - -
6850 1.38629 1.38629 1.38629 1.38629
6851 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6852 5 3.46462 0.12651 3.51274 2.85188 5 - -
6853 1.38629 1.38629 1.38629 1.38629
6854 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6855 6 0.13833 3.40764 2.81967 3.31191 6 - -
6856 1.38629 1.38629 1.38629 1.38629
6857 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6858 7 3.46462 0.12651 3.51274 2.85188 7 - -
6859 1.38629 1.38629 1.38629 1.38629
6860 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6861 8 3.11633 2.61276 3.16342 0.17427 8 - -
6862 1.38629 1.38629 1.38629 1.38629
6863 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6864 9 2.96653 3.61546 0.11417 3.52302 9 - -
6865 1.38629 1.38629 1.38629 1.38629
6866 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6867 10 2.96653 3.61546 0.11417 3.52302 10 - -
6868 1.38629 1.38629 1.38629 1.38629
6869 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6870 11 0.13833 3.40764 2.81967 3.31191 11 - -
6871 1.38629 1.38629 1.38629 1.38629
6872 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6873 12 2.96653 3.61546 0.11417 3.52302 12 - -
6874 1.38629 1.38629 1.38629 1.38629
6875 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6876 13 2.42658 1.02241 2.49809 0.75568 13 - -
6877 1.38629 1.38629 1.38629 1.38629
6878 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6879 14 1.47909 2.20605 2.32061 0.57304 14 - -
6880 1.38629 1.38629 1.38629 1.38629
6881 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6882 15 3.46462 0.12651 3.51274 2.85188 15 - -
6883 1.38629 1.38629 1.38629 1.38629
6884 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6885 16 3.46462 0.12651 3.51274 2.85188 16 - -
6886 1.38629 1.38629 1.38629 1.38629
6887 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6888 17 3.46462 0.12651 3.51274 2.85188 17 - -
6889 1.38629 1.38629 1.38629 1.38629
6890 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6891 18 0.13833 3.40764 2.81967 3.31191 18 - -
6892 1.38629 1.38629 1.38629 1.38629
6893 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6894 19 2.96653 3.61546 0.11417 3.52302 19 - -
6895 1.38629 1.38629 1.38629 1.38629
6896 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6897 20 3.11633 2.61276 3.16342 0.17427 20 - -
6898 1.38629 1.38629 1.38629 1.38629
6899 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6900 21 2.96653 3.61546 0.11417 3.52302 21 - -
6901 1.38629 1.38629 1.38629 1.38629
6902 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6903 22 0.13833 3.40764 2.81967 3.31191 22 - -
6904 1.38629 1.38629 1.38629 1.38629
6905 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6906 23 2.96653 3.61546 0.11417 3.52302 23 - -
6907 1.38629 1.38629 1.38629 1.38629
6908 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6909 24 3.46462 0.12651 3.51274 2.85188 24 - -
6910 1.38629 1.38629 1.38629 1.38629
6911 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6912 25 0.13833 3.40764 2.81967 3.31191 25 - -
6913 1.38629 1.38629 1.38629 1.38629
6914 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6915 26 3.11633 2.61276 3.16342 0.17427 26 - -
6916 1.38629 1.38629 1.38629 1.38629
6917 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6918 27 2.96653 3.61546 0.11417 3.52302 27 - -
6919 1.38629 1.38629 1.38629 1.38629
6920 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6921 28 3.46462 0.12651 3.51274 2.85188 28 - -
6922 1.38629 1.38629 1.38629 1.38629
6923 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6924 29 3.46462 0.12651 3.51274 2.85188 29 - -
6925 1.38629 1.38629 1.38629 1.38629
6926 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6927 30 3.11633 2.61276 3.16342 0.17427 30 - -
6928 1.38629 1.38629 1.38629 1.38629
6929 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6930 31 2.96653 3.61546 0.11417 3.52302 31 - -
6931 1.38629 1.38629 1.38629 1.38629
6932 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6933 32 3.11633 2.61276 3.16342 0.17427 32 - -
6934 1.38629 1.38629 1.38629 1.38629
6935 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6936 33 3.46462 0.12651 3.51274 2.85188 33 - -
6937 1.38629 1.38629 1.38629 1.38629
6938 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6939 34 3.11633 2.61276 3.16342 0.17427 34 - -
6940 1.38629 1.38629 1.38629 1.38629
6941 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6942 35 2.96653 3.61546 0.11417 3.52302 35 - -
6943 1.38629 1.38629 1.38629 1.38629
6944 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6945 36 0.13833 3.40764 2.81967 3.31191 36 - -
6946 1.38629 1.38629 1.38629 1.38629
6947 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6948 37 2.96653 3.61546 0.11417 3.52302 37 - -
6949 1.38629 1.38629 1.38629 1.38629
6950 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6951 38 3.46462 0.12651 3.51274 2.85188 38 - -
6952 1.38629 1.38629 1.38629 1.38629
6953 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6954 39 2.96653 3.61546 0.11417 3.52302 39 - -
6955 1.38629 1.38629 1.38629 1.38629
6956 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6957 40 3.11633 2.61276 3.16342 0.17427 40 - -
6958 1.38629 1.38629 1.38629 1.38629
6959 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6960 41 3.46462 0.12651 3.51274 2.85188 41 - -
6961 1.38629 1.38629 1.38629 1.38629
6962 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6963 42 2.96653 3.61546 0.11417 3.52302 42 - -
6964 1.38629 1.38629 1.38629 1.38629
6965 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6966 43 3.11633 2.61276 3.16342 0.17427 43 - -
6967 1.38629 1.38629 1.38629 1.38629
6968 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6969 44 2.96653 3.61546 0.11417 3.52302 44 - -
6970 1.38629 1.38629 1.38629 1.38629
6971 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547
6972 45 3.11633 2.61276 3.16342 0.17427 45 - -
6973 1.38629 1.38629 1.38629 1.38629
6974 0.01832 4.00905 * 1.46634 0.26236 0.00000 *
6975 //
6976 HMMER3/b [3.0 | March 2010]
6977 NAME 3_End_Metazoa_58S_end_fortysevenb_long
6978 LENG 45
6979 ALPH DNA
6980 RF no
6981 CS no
6982 MAP yes
6983 DATE Sat Feb 25 14:50:12 2012
6984 NSEQ 3
6985 EFFN 3.000000
6986 CKSUM 3961930010
6987 STATS LOCAL MSV -8.0281 0.72000
6988 STATS LOCAL VITERBI -7.7576 0.72000
6989 STATS LOCAL FORWARD -3.9753 0.72000
6990 HMM A C G T
6991 m->m m->i m->d i->m i->i d->m d->d
6992 COMPO 1.92209 1.20667 1.15009 1.43590
6993 1.38629 1.38629 1.38629 1.38629
6994 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
6995 1 3.30705 0.14631 3.36166 2.73626 1 - -
6996 1.38629 1.38629 1.38629 1.38629
6997 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6998 2 2.86982 3.47591 0.13017 3.36931 2 - -
6999 1.38629 1.38629 1.38629 1.38629
7000 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7001 3 3.30705 0.14631 3.36166 2.73626 3 - -
7002 1.38629 1.38629 1.38629 1.38629
7003 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7004 4 2.97980 2.52563 3.03204 0.19727 4 - -
7005 1.38629 1.38629 1.38629 1.38629
7006 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7007 5 3.30705 0.14631 3.36166 2.73626 5 - -
7008 1.38629 1.38629 1.38629 1.38629
7009 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7010 6 2.97980 2.52563 3.03204 0.19727 6 - -
7011 1.38629 1.38629 1.38629 1.38629
7012 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7013 7 3.30705 0.14631 3.36166 2.73626 7 - -
7014 1.38629 1.38629 1.38629 1.38629
7015 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7016 8 2.97980 2.52563 3.03204 0.19727 8 - -
7017 1.38629 1.38629 1.38629 1.38629
7018 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7019 9 2.86982 3.47591 0.13017 3.36931 9 - -
7020 1.38629 1.38629 1.38629 1.38629
7021 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7022 10 2.86982 3.47591 0.13017 3.36931 10 - -
7023 1.38629 1.38629 1.38629 1.38629
7024 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7025 11 0.15719 3.27118 2.73043 3.16274 11 - -
7026 1.38629 1.38629 1.38629 1.38629
7027 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7028 12 2.86982 3.47591 0.13017 3.36931 12 - -
7029 1.38629 1.38629 1.38629 1.38629
7030 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7031 13 3.30705 0.14631 3.36166 2.73626 13 - -
7032 1.38629 1.38629 1.38629 1.38629
7033 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7034 14 2.97980 2.52563 3.03204 0.19727 14 - -
7035 1.38629 1.38629 1.38629 1.38629
7036 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7037 15 3.30705 0.14631 3.36166 2.73626 15 - -
7038 1.38629 1.38629 1.38629 1.38629
7039 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7040 16 3.30705 0.14631 3.36166 2.73626 16 - -
7041 1.38629 1.38629 1.38629 1.38629
7042 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7043 17 3.30705 0.14631 3.36166 2.73626 17 - -
7044 1.38629 1.38629 1.38629 1.38629
7045 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7046 18 0.15719 3.27118 2.73043 3.16274 18 - -
7047 1.38629 1.38629 1.38629 1.38629
7048 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7049 19 2.86982 3.47591 0.13017 3.36931 19 - -
7050 1.38629 1.38629 1.38629 1.38629
7051 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7052 20 2.86982 3.47591 0.13017 3.36931 20 - -
7053 1.38629 1.38629 1.38629 1.38629
7054 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7055 21 2.86982 3.47591 0.13017 3.36931 21 - -
7056 1.38629 1.38629 1.38629 1.38629
7057 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7058 22 0.15719 3.27118 2.73043 3.16274 22 - -
7059 1.38629 1.38629 1.38629 1.38629
7060 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7061 23 2.86982 3.47591 0.13017 3.36931 23 - -
7062 1.38629 1.38629 1.38629 1.38629
7063 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7064 24 3.30705 0.14631 3.36166 2.73626 24 - -
7065 1.38629 1.38629 1.38629 1.38629
7066 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7067 25 0.15719 3.27118 2.73043 3.16274 25 - -
7068 1.38629 1.38629 1.38629 1.38629
7069 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7070 26 2.97980 2.52563 3.03204 0.19727 26 - -
7071 1.38629 1.38629 1.38629 1.38629
7072 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7073 27 2.86982 3.47591 0.13017 3.36931 27 - -
7074 1.38629 1.38629 1.38629 1.38629
7075 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7076 28 3.30705 0.14631 3.36166 2.73626 28 - -
7077 1.38629 1.38629 1.38629 1.38629
7078 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7079 29 3.30705 0.14631 3.36166 2.73626 29 - -
7080 1.38629 1.38629 1.38629 1.38629
7081 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7082 30 2.97980 2.52563 3.03204 0.19727 30 - -
7083 1.38629 1.38629 1.38629 1.38629
7084 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7085 31 2.86982 3.47591 0.13017 3.36931 31 - -
7086 1.38629 1.38629 1.38629 1.38629
7087 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7088 32 2.97980 2.52563 3.03204 0.19727 32 - -
7089 1.38629 1.38629 1.38629 1.38629
7090 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7091 33 3.30705 0.14631 3.36166 2.73626 33 - -
7092 1.38629 1.38629 1.38629 1.38629
7093 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7094 34 2.97980 2.52563 3.03204 0.19727 34 - -
7095 1.38629 1.38629 1.38629 1.38629
7096 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7097 35 2.86982 3.47591 0.13017 3.36931 35 - -
7098 1.38629 1.38629 1.38629 1.38629
7099 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7100 36 0.15719 3.27118 2.73043 3.16274 36 - -
7101 1.38629 1.38629 1.38629 1.38629
7102 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7103 37 2.86982 3.47591 0.13017 3.36931 37 - -
7104 1.38629 1.38629 1.38629 1.38629
7105 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7106 38 3.30705 0.14631 3.36166 2.73626 38 - -
7107 1.38629 1.38629 1.38629 1.38629
7108 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7109 39 2.86982 3.47591 0.13017 3.36931 39 - -
7110 1.38629 1.38629 1.38629 1.38629
7111 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7112 40 2.97980 2.52563 3.03204 0.19727 40 - -
7113 1.38629 1.38629 1.38629 1.38629
7114 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7115 41 3.30705 0.14631 3.36166 2.73626 41 - -
7116 1.38629 1.38629 1.38629 1.38629
7117 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7118 42 2.86982 3.47591 0.13017 3.36931 42 - -
7119 1.38629 1.38629 1.38629 1.38629
7120 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7121 43 2.97980 2.52563 3.03204 0.19727 43 - -
7122 1.38629 1.38629 1.38629 1.38629
7123 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7124 44 2.86982 3.47591 0.13017 3.36931 44 - -
7125 1.38629 1.38629 1.38629 1.38629
7126 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7127 45 2.97980 2.52563 3.03204 0.19727 45 - -
7128 1.38629 1.38629 1.38629 1.38629
7129 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
7130 //
7131 HMMER3/b [3.0 | March 2010]
7132 NAME 3_End_Metazoa_58S_end_fortysix_long
7133 LENG 45
7134 ALPH DNA
7135 RF no
7136 CS no
7137 MAP yes
7138 DATE Sat Feb 25 14:49:57 2012
7139 NSEQ 3
7140 EFFN 3.000000
7141 CKSUM 1910693752
7142 STATS LOCAL MSV -8.1780 0.72010
7143 STATS LOCAL VITERBI -7.9339 0.72010
7144 STATS LOCAL FORWARD -3.7083 0.72010
7145 HMM A C G T
7146 m->m m->i m->d i->m i->i d->m d->d
7147 COMPO 2.04431 1.14945 1.20707 1.36788
7148 1.38629 1.38629 1.38629 1.38629
7149 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
7150 1 3.30705 0.14631 3.36166 2.73626 1 - -
7151 1.38629 1.38629 1.38629 1.38629
7152 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7153 2 2.86982 3.47591 0.13017 3.36931 2 - -
7154 1.38629 1.38629 1.38629 1.38629
7155 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7156 3 2.97980 2.52563 3.03204 0.19727 3 - -
7157 1.38629 1.38629 1.38629 1.38629
7158 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7159 4 2.97980 2.52563 3.03204 0.19727 4 - -
7160 1.38629 1.38629 1.38629 1.38629
7161 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7162 5 3.30705 0.14631 3.36166 2.73626 5 - -
7163 1.38629 1.38629 1.38629 1.38629
7164 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7165 6 2.97980 2.52563 3.03204 0.19727 6 - -
7166 1.38629 1.38629 1.38629 1.38629
7167 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7168 7 3.30705 0.14631 3.36166 2.73626 7 - -
7169 1.38629 1.38629 1.38629 1.38629
7170 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7171 8 2.86982 3.47591 0.13017 3.36931 8 - -
7172 1.38629 1.38629 1.38629 1.38629
7173 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7174 9 2.86982 3.47591 0.13017 3.36931 9 - -
7175 1.38629 1.38629 1.38629 1.38629
7176 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7177 10 2.86982 3.47591 0.13017 3.36931 10 - -
7178 1.38629 1.38629 1.38629 1.38629
7179 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7180 11 2.86982 3.47591 0.13017 3.36931 11 - -
7181 1.38629 1.38629 1.38629 1.38629
7182 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7183 12 2.97980 2.52563 3.03204 0.19727 12 - -
7184 1.38629 1.38629 1.38629 1.38629
7185 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7186 13 3.30705 0.14631 3.36166 2.73626 13 - -
7187 1.38629 1.38629 1.38629 1.38629
7188 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7189 14 2.97980 2.52563 3.03204 0.19727 14 - -
7190 1.38629 1.38629 1.38629 1.38629
7191 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7192 15 2.97980 2.52563 3.03204 0.19727 15 - -
7193 1.38629 1.38629 1.38629 1.38629
7194 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7195 16 3.30705 0.14631 3.36166 2.73626 16 - -
7196 1.38629 1.38629 1.38629 1.38629
7197 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7198 17 3.30705 0.14631 3.36166 2.73626 17 - -
7199 1.38629 1.38629 1.38629 1.38629
7200 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7201 18 3.30705 0.14631 3.36166 2.73626 18 - -
7202 1.38629 1.38629 1.38629 1.38629
7203 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7204 19 2.86982 3.47591 0.13017 3.36931 19 - -
7205 1.38629 1.38629 1.38629 1.38629
7206 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7207 20 0.15719 3.27118 2.73043 3.16274 20 - -
7208 1.38629 1.38629 1.38629 1.38629
7209 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7210 21 2.86982 3.47591 0.13017 3.36931 21 - -
7211 1.38629 1.38629 1.38629 1.38629
7212 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7213 22 0.15719 3.27118 2.73043 3.16274 22 - -
7214 1.38629 1.38629 1.38629 1.38629
7215 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7216 23 2.86982 3.47591 0.13017 3.36931 23 - -
7217 1.38629 1.38629 1.38629 1.38629
7218 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7219 24 3.30705 0.14631 3.36166 2.73626 24 - -
7220 1.38629 1.38629 1.38629 1.38629
7221 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7222 25 0.15719 3.27118 2.73043 3.16274 25 - -
7223 1.38629 1.38629 1.38629 1.38629
7224 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7225 26 3.30705 0.14631 3.36166 2.73626 26 - -
7226 1.38629 1.38629 1.38629 1.38629
7227 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7228 27 2.86982 3.47591 0.13017 3.36931 27 - -
7229 1.38629 1.38629 1.38629 1.38629
7230 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7231 28 2.97980 2.52563 3.03204 0.19727 28 - -
7232 1.38629 1.38629 1.38629 1.38629
7233 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7234 29 3.30705 0.14631 3.36166 2.73626 29 - -
7235 1.38629 1.38629 1.38629 1.38629
7236 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7237 30 2.97980 2.52563 3.03204 0.19727 30 - -
7238 1.38629 1.38629 1.38629 1.38629
7239 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7240 31 2.86982 3.47591 0.13017 3.36931 31 - -
7241 1.38629 1.38629 1.38629 1.38629
7242 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7243 32 3.30705 0.14631 3.36166 2.73626 32 - -
7244 1.38629 1.38629 1.38629 1.38629
7245 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7246 33 3.30705 0.14631 3.36166 2.73626 33 - -
7247 1.38629 1.38629 1.38629 1.38629
7248 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7249 34 2.97980 2.52563 3.03204 0.19727 34 - -
7250 1.38629 1.38629 1.38629 1.38629
7251 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7252 35 2.86982 3.47591 0.13017 3.36931 35 - -
7253 1.38629 1.38629 1.38629 1.38629
7254 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7255 36 0.15719 3.27118 2.73043 3.16274 36 - -
7256 1.38629 1.38629 1.38629 1.38629
7257 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7258 37 2.86982 3.47591 0.13017 3.36931 37 - -
7259 1.38629 1.38629 1.38629 1.38629
7260 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7261 38 2.97980 2.52563 3.03204 0.19727 38 - -
7262 1.38629 1.38629 1.38629 1.38629
7263 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7264 39 2.86982 3.47591 0.13017 3.36931 39 - -
7265 1.38629 1.38629 1.38629 1.38629
7266 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7267 40 3.30705 0.14631 3.36166 2.73626 40 - -
7268 1.38629 1.38629 1.38629 1.38629
7269 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7270 41 3.30705 0.14631 3.36166 2.73626 41 - -
7271 1.38629 1.38629 1.38629 1.38629
7272 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7273 42 3.30705 0.14631 3.36166 2.73626 42 - -
7274 1.38629 1.38629 1.38629 1.38629
7275 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7276 43 2.86982 3.47591 0.13017 3.36931 43 - -
7277 1.38629 1.38629 1.38629 1.38629
7278 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7279 44 2.97980 2.52563 3.03204 0.19727 44 - -
7280 1.38629 1.38629 1.38629 1.38629
7281 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7282 45 2.97980 2.52563 3.03204 0.19727 45 - -
7283 1.38629 1.38629 1.38629 1.38629
7284 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
7285 //
7286 HMMER3/b [3.0 | March 2010]
7287 NAME 3_End_Metazoa_58S_end_fortythreea_long
7288 LENG 45
7289 ALPH DNA
7290 RF no
7291 CS no
7292 MAP yes
7293 DATE Sat Feb 25 14:48:03 2012
7294 NSEQ 91
7295 EFFN 3.340851
7296 CKSUM 1476701771
7297 STATS LOCAL MSV -8.0383 0.71932
7298 STATS LOCAL VITERBI -7.8104 0.71932
7299 STATS LOCAL FORWARD -3.8961 0.71932
7300 HMM A C G T
7301 m->m m->i m->d i->m i->i d->m d->d
7302 COMPO 1.93857 1.37910 1.13933 1.25790
7303 1.38629 1.38629 1.38629 1.38629
7304 0.03676 4.01473 4.01473 1.46634 0.26236 0.00000 *
7305 1 2.95157 3.59364 0.11652 3.49892 1 - -
7306 1.38629 1.38629 1.38629 1.38629
7307 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7308 2 3.43979 0.12941 3.48897 2.83386 2 - -
7309 1.38629 1.38629 1.38629 1.38629
7310 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7311 3 2.95157 3.59364 0.11652 3.49892 3 - -
7312 1.38629 1.38629 1.38629 1.38629
7313 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7314 4 3.43979 0.12941 3.48897 2.83386 4 - -
7315 1.38629 1.38629 1.38629 1.38629
7316 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7317 5 3.09447 2.59887 3.14240 0.17774 5 - -
7318 1.38629 1.38629 1.38629 1.38629
7319 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7320 6 3.43979 0.12941 3.48897 2.83386 6 - -
7321 1.38629 1.38629 1.38629 1.38629
7322 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7323 7 3.09447 2.59887 3.14240 0.17774 7 - -
7324 1.38629 1.38629 1.38629 1.38629
7325 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7326 8 3.09447 2.59887 3.14240 0.17774 8 - -
7327 1.38629 1.38629 1.38629 1.38629
7328 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7329 9 2.95157 3.59364 0.11652 3.49892 9 - -
7330 1.38629 1.38629 1.38629 1.38629
7331 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7332 10 2.95157 3.59364 0.11652 3.49892 10 - -
7333 1.38629 1.38629 1.38629 1.38629
7334 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7335 11 2.95157 3.59364 0.11652 3.49892 11 - -
7336 1.38629 1.38629 1.38629 1.38629
7337 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7338 12 3.09447 2.59887 3.14240 0.17774 12 - -
7339 1.38629 1.38629 1.38629 1.38629
7340 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7341 13 3.09447 2.59887 3.14240 0.17774 13 - -
7342 1.38629 1.38629 1.38629 1.38629
7343 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7344 14 3.43979 0.12941 3.48897 2.83386 14 - -
7345 1.38629 1.38629 1.38629 1.38629
7346 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7347 15 3.09447 2.59887 3.14240 0.17774 15 - -
7348 1.38629 1.38629 1.38629 1.38629
7349 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7350 16 3.43979 0.12941 3.48897 2.83386 16 - -
7351 1.38629 1.38629 1.38629 1.38629
7352 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7353 17 3.43979 0.12941 3.48897 2.83386 17 - -
7354 1.38629 1.38629 1.38629 1.38629
7355 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7356 18 3.43979 0.12941 3.48897 2.83386 18 - -
7357 1.38629 1.38629 1.38629 1.38629
7358 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7359 19 0.14113 3.38606 2.80569 3.28828 19 - -
7360 1.38629 1.38629 1.38629 1.38629
7361 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7362 20 2.95157 3.59364 0.11652 3.49892 20 - -
7363 1.38629 1.38629 1.38629 1.38629
7364 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7365 21 2.95157 3.59364 0.11652 3.49892 21 - -
7366 1.38629 1.38629 1.38629 1.38629
7367 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7368 22 0.14113 3.38606 2.80569 3.28828 22 - -
7369 1.38629 1.38629 1.38629 1.38629
7370 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7371 23 2.95157 3.59364 0.11652 3.49892 23 - -
7372 1.38629 1.38629 1.38629 1.38629
7373 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7374 24 3.43979 0.12941 3.48897 2.83386 24 - -
7375 1.38629 1.38629 1.38629 1.38629
7376 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7377 25 0.14113 3.38606 2.80569 3.28828 25 - -
7378 1.38629 1.38629 1.38629 1.38629
7379 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7380 26 3.09447 2.59887 3.14240 0.17774 26 - -
7381 1.38629 1.38629 1.38629 1.38629
7382 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7383 27 2.95157 3.59364 0.11652 3.49892 27 - -
7384 1.38629 1.38629 1.38629 1.38629
7385 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7386 28 3.09447 2.59887 3.14240 0.17774 28 - -
7387 1.38629 1.38629 1.38629 1.38629
7388 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7389 29 3.43979 0.12941 3.48897 2.83386 29 - -
7390 1.38629 1.38629 1.38629 1.38629
7391 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7392 30 3.09447 2.59887 3.14240 0.17774 30 - -
7393 1.38629 1.38629 1.38629 1.38629
7394 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7395 31 2.95157 3.59364 0.11652 3.49892 31 - -
7396 1.38629 1.38629 1.38629 1.38629
7397 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7398 32 3.09447 2.59887 3.14240 0.17774 32 - -
7399 1.38629 1.38629 1.38629 1.38629
7400 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7401 33 3.43979 0.12941 3.48897 2.83386 33 - -
7402 1.38629 1.38629 1.38629 1.38629
7403 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7404 34 3.09447 2.59887 3.14240 0.17774 34 - -
7405 1.38629 1.38629 1.38629 1.38629
7406 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7407 35 2.95157 3.59364 0.11652 3.49892 35 - -
7408 1.38629 1.38629 1.38629 1.38629
7409 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7410 36 0.14113 3.38606 2.80569 3.28828 36 - -
7411 1.38629 1.38629 1.38629 1.38629
7412 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7413 37 2.95157 3.59364 0.11652 3.49892 37 - -
7414 1.38629 1.38629 1.38629 1.38629
7415 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7416 38 3.09447 2.59887 3.14240 0.17774 38 - -
7417 1.38629 1.38629 1.38629 1.38629
7418 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7419 39 2.95157 3.59364 0.11652 3.49892 39 - -
7420 1.38629 1.38629 1.38629 1.38629
7421 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7422 40 3.09447 2.59887 3.14240 0.17774 40 - -
7423 1.38629 1.38629 1.38629 1.38629
7424 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7425 41 3.43979 0.12941 3.48897 2.83386 41 - -
7426 1.38629 1.38629 1.38629 1.38629
7427 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7428 42 2.95157 3.59364 0.11652 3.49892 42 - -
7429 1.38629 1.38629 1.38629 1.38629
7430 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7431 43 2.95157 3.59364 0.11652 3.49892 43 - -
7432 1.38629 1.38629 1.38629 1.38629
7433 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7434 44 0.25356 2.90313 2.57702 2.37388 44 - -
7435 1.38629 1.38629 1.38629 1.38629
7436 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547
7437 45 2.05766 2.35964 2.61577 0.35001 45 - -
7438 1.38629 1.38629 1.38629 1.38629
7439 0.01855 3.99652 * 1.46634 0.26236 0.00000 *
7440 //
7441 HMMER3/b [3.0 | March 2010]
7442 NAME 3_End_Metazoa_58S_end_fortythreeb_long
7443 LENG 45
7444 ALPH DNA
7445 RF no
7446 CS no
7447 MAP yes
7448 DATE Sat Feb 25 14:48:12 2012
7449 NSEQ 10
7450 EFFN 3.344727
7451 CKSUM 3904922218
7452 STATS LOCAL MSV -8.0935 0.71933
7453 STATS LOCAL VITERBI -7.7454 0.71933
7454 STATS LOCAL FORWARD -3.8675 0.71933
7455 HMM A C G T
7456 m->m m->i m->d i->m i->i d->m d->d
7457 COMPO 2.05450 1.18855 1.08806 1.46832
7458 1.38629 1.38629 1.38629 1.38629
7459 0.03674 4.01543 4.01543 1.46634 0.26236 0.00000 *
7460 1 2.95243 3.59489 0.11638 3.50030 1 - -
7461 1.38629 1.38629 1.38629 1.38629
7462 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7463 2 3.44121 0.12925 3.49033 2.83489 2 - -
7464 1.38629 1.38629 1.38629 1.38629
7465 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7466 3 2.95243 3.59489 0.11638 3.50030 3 - -
7467 1.38629 1.38629 1.38629 1.38629
7468 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7469 4 3.44121 0.12925 3.49033 2.83489 4 - -
7470 1.38629 1.38629 1.38629 1.38629
7471 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7472 5 3.09571 2.59966 3.14360 0.17754 5 - -
7473 1.38629 1.38629 1.38629 1.38629
7474 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7475 6 3.44121 0.12925 3.49033 2.83489 6 - -
7476 1.38629 1.38629 1.38629 1.38629
7477 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7478 7 3.09571 2.59966 3.14360 0.17754 7 - -
7479 1.38629 1.38629 1.38629 1.38629
7480 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7481 8 3.44121 0.12925 3.49033 2.83489 8 - -
7482 1.38629 1.38629 1.38629 1.38629
7483 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7484 9 2.95243 3.59489 0.11638 3.50030 9 - -
7485 1.38629 1.38629 1.38629 1.38629
7486 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7487 10 2.95243 3.59489 0.11638 3.50030 10 - -
7488 1.38629 1.38629 1.38629 1.38629
7489 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7490 11 2.95243 3.59489 0.11638 3.50030 11 - -
7491 1.38629 1.38629 1.38629 1.38629
7492 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7493 12 3.09571 2.59966 3.14360 0.17754 12 - -
7494 1.38629 1.38629 1.38629 1.38629
7495 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7496 13 3.09571 2.59966 3.14360 0.17754 13 - -
7497 1.38629 1.38629 1.38629 1.38629
7498 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7499 14 3.44121 0.12925 3.49033 2.83489 14 - -
7500 1.38629 1.38629 1.38629 1.38629
7501 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7502 15 3.09571 2.59966 3.14360 0.17754 15 - -
7503 1.38629 1.38629 1.38629 1.38629
7504 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7505 16 3.44121 0.12925 3.49033 2.83489 16 - -
7506 1.38629 1.38629 1.38629 1.38629
7507 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7508 17 3.44121 0.12925 3.49033 2.83489 17 - -
7509 1.38629 1.38629 1.38629 1.38629
7510 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7511 18 3.44121 0.12925 3.49033 2.83489 18 - -
7512 1.38629 1.38629 1.38629 1.38629
7513 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7514 19 2.95243 3.59489 0.11638 3.50030 19 - -
7515 1.38629 1.38629 1.38629 1.38629
7516 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7517 20 2.95243 3.59489 0.11638 3.50030 20 - -
7518 1.38629 1.38629 1.38629 1.38629
7519 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7520 21 2.95243 3.59489 0.11638 3.50030 21 - -
7521 1.38629 1.38629 1.38629 1.38629
7522 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7523 22 0.14097 3.38730 2.80649 3.28963 22 - -
7524 1.38629 1.38629 1.38629 1.38629
7525 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7526 23 2.95243 3.59489 0.11638 3.50030 23 - -
7527 1.38629 1.38629 1.38629 1.38629
7528 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7529 24 3.44121 0.12925 3.49033 2.83489 24 - -
7530 1.38629 1.38629 1.38629 1.38629
7531 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7532 25 0.14097 3.38730 2.80649 3.28963 25 - -
7533 1.38629 1.38629 1.38629 1.38629
7534 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7535 26 2.54110 0.54447 2.61246 1.31782 26 - -
7536 1.38629 1.38629 1.38629 1.38629
7537 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7538 27 2.95243 3.59489 0.11638 3.50030 27 - -
7539 1.38629 1.38629 1.38629 1.38629
7540 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7541 28 3.09571 2.59966 3.14360 0.17754 28 - -
7542 1.38629 1.38629 1.38629 1.38629
7543 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7544 29 3.44121 0.12925 3.49033 2.83489 29 - -
7545 1.38629 1.38629 1.38629 1.38629
7546 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7547 30 2.54110 0.54447 2.61246 1.31782 30 - -
7548 1.38629 1.38629 1.38629 1.38629
7549 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7550 31 2.95243 3.59489 0.11638 3.50030 31 - -
7551 1.38629 1.38629 1.38629 1.38629
7552 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7553 32 3.09571 2.59966 3.14360 0.17754 32 - -
7554 1.38629 1.38629 1.38629 1.38629
7555 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7556 33 3.44121 0.12925 3.49033 2.83489 33 - -
7557 1.38629 1.38629 1.38629 1.38629
7558 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7559 34 3.09571 2.59966 3.14360 0.17754 34 - -
7560 1.38629 1.38629 1.38629 1.38629
7561 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7562 35 2.95243 3.59489 0.11638 3.50030 35 - -
7563 1.38629 1.38629 1.38629 1.38629
7564 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7565 36 0.14097 3.38730 2.80649 3.28963 36 - -
7566 1.38629 1.38629 1.38629 1.38629
7567 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7568 37 2.95243 3.59489 0.11638 3.50030 37 - -
7569 1.38629 1.38629 1.38629 1.38629
7570 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7571 38 3.09571 2.59966 3.14360 0.17754 38 - -
7572 1.38629 1.38629 1.38629 1.38629
7573 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7574 39 2.95243 3.59489 0.11638 3.50030 39 - -
7575 1.38629 1.38629 1.38629 1.38629
7576 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7577 40 3.09571 2.59966 3.14360 0.17754 40 - -
7578 1.38629 1.38629 1.38629 1.38629
7579 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7580 41 3.44121 0.12925 3.49033 2.83489 41 - -
7581 1.38629 1.38629 1.38629 1.38629
7582 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7583 42 2.95243 3.59489 0.11638 3.50030 42 - -
7584 1.38629 1.38629 1.38629 1.38629
7585 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7586 43 2.95243 3.59489 0.11638 3.50030 43 - -
7587 1.38629 1.38629 1.38629 1.38629
7588 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7589 44 3.44121 0.12925 3.49033 2.83489 44 - -
7590 1.38629 1.38629 1.38629 1.38629
7591 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547
7592 45 0.14097 3.38730 2.80649 3.28963 45 - -
7593 1.38629 1.38629 1.38629 1.38629
7594 0.01854 3.99723 * 1.46634 0.26236 0.00000 *
7595 //
7596 HMMER3/b [3.0 | March 2010]
7597 NAME 3_End_Metazoa_58S_end_fortythreec_long
7598 LENG 45
7599 ALPH DNA
7600 RF no
7601 CS no
7602 MAP yes
7603 DATE Sat Feb 25 14:48:18 2012
7604 NSEQ 41
7605 EFFN 3.410828
7606 CKSUM 1774296887
7607 STATS LOCAL MSV -7.2090 0.71932
7608 STATS LOCAL VITERBI -7.7796 0.71932
7609 STATS LOCAL FORWARD -3.8751 0.71932
7610 HMM A C G T
7611 m->m m->i m->d i->m i->i d->m d->d
7612 COMPO 2.06490 1.38686 1.13813 1.19438
7613 1.38629 1.38629 1.38629 1.38629
7614 0.03630 4.02728 4.02728 1.46634 0.26236 0.00000 *
7615 1 2.96683 3.61590 0.11413 3.52351 1 - -
7616 1.38629 1.38629 1.38629 1.38629
7617 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7618 2 3.46513 0.12645 3.51322 2.85225 2 - -
7619 1.38629 1.38629 1.38629 1.38629
7620 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7621 3 2.96683 3.61590 0.11413 3.52351 3 - -
7622 1.38629 1.38629 1.38629 1.38629
7623 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7624 4 3.46513 0.12645 3.51322 2.85225 4 - -
7625 1.38629 1.38629 1.38629 1.38629
7626 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7627 5 3.11677 2.61304 3.16384 0.17420 5 - -
7628 1.38629 1.38629 1.38629 1.38629
7629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7630 6 3.46513 0.12645 3.51322 2.85225 6 - -
7631 1.38629 1.38629 1.38629 1.38629
7632 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7633 7 3.11677 2.61304 3.16384 0.17420 7 - -
7634 1.38629 1.38629 1.38629 1.38629
7635 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7636 8 3.11677 2.61304 3.16384 0.17420 8 - -
7637 1.38629 1.38629 1.38629 1.38629
7638 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7639 9 2.96683 3.61590 0.11413 3.52351 9 - -
7640 1.38629 1.38629 1.38629 1.38629
7641 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7642 10 2.96683 3.61590 0.11413 3.52351 10 - -
7643 1.38629 1.38629 1.38629 1.38629
7644 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7645 11 2.96683 3.61590 0.11413 3.52351 11 - -
7646 1.38629 1.38629 1.38629 1.38629
7647 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7648 12 3.11677 2.61304 3.16384 0.17420 12 - -
7649 1.38629 1.38629 1.38629 1.38629
7650 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7651 13 3.11677 2.61304 3.16384 0.17420 13 - -
7652 1.38629 1.38629 1.38629 1.38629
7653 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7654 14 2.77098 0.36080 2.83838 1.70505 14 - -
7655 1.38629 1.38629 1.38629 1.38629
7656 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7657 15 3.11677 2.61304 3.16384 0.17420 15 - -
7658 1.38629 1.38629 1.38629 1.38629
7659 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7660 16 3.46513 0.12645 3.51322 2.85225 16 - -
7661 1.38629 1.38629 1.38629 1.38629
7662 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7663 17 3.46513 0.12645 3.51322 2.85225 17 - -
7664 1.38629 1.38629 1.38629 1.38629
7665 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7666 18 3.46513 0.12645 3.51322 2.85225 18 - -
7667 1.38629 1.38629 1.38629 1.38629
7668 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7669 19 0.13828 3.40807 2.81996 3.31238 19 - -
7670 1.38629 1.38629 1.38629 1.38629
7671 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7672 20 2.96683 3.61590 0.11413 3.52351 20 - -
7673 1.38629 1.38629 1.38629 1.38629
7674 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7675 21 2.96683 3.61590 0.11413 3.52351 21 - -
7676 1.38629 1.38629 1.38629 1.38629
7677 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7678 22 0.13828 3.40807 2.81996 3.31238 22 - -
7679 1.38629 1.38629 1.38629 1.38629
7680 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7681 23 2.96683 3.61590 0.11413 3.52351 23 - -
7682 1.38629 1.38629 1.38629 1.38629
7683 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7684 24 3.46513 0.12645 3.51322 2.85225 24 - -
7685 1.38629 1.38629 1.38629 1.38629
7686 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7687 25 0.18283 3.24670 2.46518 3.14204 25 - -
7688 1.38629 1.38629 1.38629 1.38629
7689 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7690 26 2.86839 2.05741 2.92483 0.27214 26 - -
7691 1.38629 1.38629 1.38629 1.38629
7692 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7693 27 2.96683 3.61590 0.11413 3.52351 27 - -
7694 1.38629 1.38629 1.38629 1.38629
7695 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7696 28 3.11677 2.61304 3.16384 0.17420 28 - -
7697 1.38629 1.38629 1.38629 1.38629
7698 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7699 29 3.46513 0.12645 3.51322 2.85225 29 - -
7700 1.38629 1.38629 1.38629 1.38629
7701 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7702 30 3.11677 2.61304 3.16384 0.17420 30 - -
7703 1.38629 1.38629 1.38629 1.38629
7704 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7705 31 2.96683 3.61590 0.11413 3.52351 31 - -
7706 1.38629 1.38629 1.38629 1.38629
7707 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7708 32 3.11677 2.61304 3.16384 0.17420 32 - -
7709 1.38629 1.38629 1.38629 1.38629
7710 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7711 33 3.46513 0.12645 3.51322 2.85225 33 - -
7712 1.38629 1.38629 1.38629 1.38629
7713 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7714 34 3.11677 2.61304 3.16384 0.17420 34 - -
7715 1.38629 1.38629 1.38629 1.38629
7716 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7717 35 2.96683 3.61590 0.11413 3.52351 35 - -
7718 1.38629 1.38629 1.38629 1.38629
7719 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7720 36 0.13828 3.40807 2.81996 3.31238 36 - -
7721 1.38629 1.38629 1.38629 1.38629
7722 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7723 37 2.96683 3.61590 0.11413 3.52351 37 - -
7724 1.38629 1.38629 1.38629 1.38629
7725 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7726 38 3.11677 2.61304 3.16384 0.17420 38 - -
7727 1.38629 1.38629 1.38629 1.38629
7728 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7729 39 2.96683 3.61590 0.11413 3.52351 39 - -
7730 1.38629 1.38629 1.38629 1.38629
7731 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7732 40 3.11677 2.61304 3.16384 0.17420 40 - -
7733 1.38629 1.38629 1.38629 1.38629
7734 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7735 41 3.46513 0.12645 3.51322 2.85225 41 - -
7736 1.38629 1.38629 1.38629 1.38629
7737 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7738 42 2.96683 3.61590 0.11413 3.52351 42 - -
7739 1.38629 1.38629 1.38629 1.38629
7740 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7741 43 2.96683 3.61590 0.11413 3.52351 43 - -
7742 1.38629 1.38629 1.38629 1.38629
7743 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7744 44 3.11677 2.61304 3.16384 0.17420 44 - -
7745 1.38629 1.38629 1.38629 1.38629
7746 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547
7747 45 2.97628 2.28208 3.02857 0.22494 45 - -
7748 1.38629 1.38629 1.38629 1.38629
7749 0.01831 4.00930 * 1.46634 0.26236 0.00000 *
7750 //
7751 HMMER3/b [3.0 | March 2010]
7752 NAME 3_End_Metazoa_58S_end_fortythreed_long
7753 LENG 45
7754 ALPH DNA
7755 RF no
7756 CS no
7757 MAP yes
7758 DATE Sat Feb 25 14:48:26 2012
7759 NSEQ 4
7760 EFFN 3.417969
7761 CKSUM 173122380
7762 STATS LOCAL MSV -7.2851 0.71933
7763 STATS LOCAL VITERBI -7.8107 0.71933
7764 STATS LOCAL FORWARD -4.0662 0.71933
7765 HMM A C G T
7766 m->m m->i m->d i->m i->i d->m d->d
7767 COMPO 2.06256 1.34658 1.25579 1.11508
7768 1.38629 1.38629 1.38629 1.38629
7769 0.03625 4.02856 4.02856 1.46634 0.26236 0.00000 *
7770 1 2.96836 3.61813 0.11389 3.52598 1 - -
7771 1.38629 1.38629 1.38629 1.38629
7772 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7773 2 3.46768 0.12616 3.51566 2.85409 2 - -
7774 1.38629 1.38629 1.38629 1.38629
7775 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7776 3 2.96836 3.61813 0.11389 3.52598 3 - -
7777 1.38629 1.38629 1.38629 1.38629
7778 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7779 4 3.46768 0.12616 3.51566 2.85409 4 - -
7780 1.38629 1.38629 1.38629 1.38629
7781 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7782 5 3.11902 2.61447 3.16601 0.17385 5 - -
7783 1.38629 1.38629 1.38629 1.38629
7784 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7785 6 3.46768 0.12616 3.51566 2.85409 6 - -
7786 1.38629 1.38629 1.38629 1.38629
7787 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7788 7 3.11902 2.61447 3.16601 0.17385 7 - -
7789 1.38629 1.38629 1.38629 1.38629
7790 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7791 8 3.11902 2.61447 3.16601 0.17385 8 - -
7792 1.38629 1.38629 1.38629 1.38629
7793 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7794 9 2.96836 3.61813 0.11389 3.52598 9 - -
7795 1.38629 1.38629 1.38629 1.38629
7796 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7797 10 2.96836 3.61813 0.11389 3.52598 10 - -
7798 1.38629 1.38629 1.38629 1.38629
7799 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7800 11 2.96836 3.61813 0.11389 3.52598 11 - -
7801 1.38629 1.38629 1.38629 1.38629
7802 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7803 12 3.11902 2.61447 3.16601 0.17385 12 - -
7804 1.38629 1.38629 1.38629 1.38629
7805 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7806 13 3.11902 2.61447 3.16601 0.17385 13 - -
7807 1.38629 1.38629 1.38629 1.38629
7808 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7809 14 3.46768 0.12616 3.51566 2.85409 14 - -
7810 1.38629 1.38629 1.38629 1.38629
7811 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7812 15 2.42235 0.95448 2.49423 0.81257 15 - -
7813 1.38629 1.38629 1.38629 1.38629
7814 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7815 16 3.46768 0.12616 3.51566 2.85409 16 - -
7816 1.38629 1.38629 1.38629 1.38629
7817 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7818 17 3.46768 0.12616 3.51566 2.85409 17 - -
7819 1.38629 1.38629 1.38629 1.38629
7820 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7821 18 3.46768 0.12616 3.51566 2.85409 18 - -
7822 1.38629 1.38629 1.38629 1.38629
7823 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7824 19 0.13799 3.41029 2.82139 3.31481 19 - -
7825 1.38629 1.38629 1.38629 1.38629
7826 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7827 20 2.96836 3.61813 0.11389 3.52598 20 - -
7828 1.38629 1.38629 1.38629 1.38629
7829 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7830 21 2.96836 3.61813 0.11389 3.52598 21 - -
7831 1.38629 1.38629 1.38629 1.38629
7832 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7833 22 0.13799 3.41029 2.82139 3.31481 22 - -
7834 1.38629 1.38629 1.38629 1.38629
7835 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7836 23 2.96836 3.61813 0.11389 3.52598 23 - -
7837 1.38629 1.38629 1.38629 1.38629
7838 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7839 24 3.46768 0.12616 3.51566 2.85409 24 - -
7840 1.38629 1.38629 1.38629 1.38629
7841 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7842 25 0.13799 3.41029 2.82139 3.31481 25 - -
7843 1.38629 1.38629 1.38629 1.38629
7844 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7845 26 3.11902 2.61447 3.16601 0.17385 26 - -
7846 1.38629 1.38629 1.38629 1.38629
7847 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7848 27 2.96836 3.61813 0.11389 3.52598 27 - -
7849 1.38629 1.38629 1.38629 1.38629
7850 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7851 28 3.11902 2.61447 3.16601 0.17385 28 - -
7852 1.38629 1.38629 1.38629 1.38629
7853 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7854 29 3.46768 0.12616 3.51566 2.85409 29 - -
7855 1.38629 1.38629 1.38629 1.38629
7856 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7857 30 3.11902 2.61447 3.16601 0.17385 30 - -
7858 1.38629 1.38629 1.38629 1.38629
7859 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7860 31 2.96836 3.61813 0.11389 3.52598 31 - -
7861 1.38629 1.38629 1.38629 1.38629
7862 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7863 32 3.11902 2.61447 3.16601 0.17385 32 - -
7864 1.38629 1.38629 1.38629 1.38629
7865 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7866 33 3.46768 0.12616 3.51566 2.85409 33 - -
7867 1.38629 1.38629 1.38629 1.38629
7868 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7869 34 3.11902 2.61447 3.16601 0.17385 34 - -
7870 1.38629 1.38629 1.38629 1.38629
7871 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7872 35 2.96836 3.61813 0.11389 3.52598 35 - -
7873 1.38629 1.38629 1.38629 1.38629
7874 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7875 36 0.13799 3.41029 2.82139 3.31481 36 - -
7876 1.38629 1.38629 1.38629 1.38629
7877 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7878 37 2.96836 3.61813 0.11389 3.52598 37 - -
7879 1.38629 1.38629 1.38629 1.38629
7880 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7881 38 3.11902 2.61447 3.16601 0.17385 38 - -
7882 1.38629 1.38629 1.38629 1.38629
7883 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7884 39 2.96836 3.61813 0.11389 3.52598 39 - -
7885 1.38629 1.38629 1.38629 1.38629
7886 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7887 40 3.11902 2.61447 3.16601 0.17385 40 - -
7888 1.38629 1.38629 1.38629 1.38629
7889 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7890 41 3.46768 0.12616 3.51566 2.85409 41 - -
7891 1.38629 1.38629 1.38629 1.38629
7892 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7893 42 3.11902 2.61447 3.16601 0.17385 42 - -
7894 1.38629 1.38629 1.38629 1.38629
7895 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7896 43 3.11902 2.61447 3.16601 0.17385 43 - -
7897 1.38629 1.38629 1.38629 1.38629
7898 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7899 44 3.11902 2.61447 3.16601 0.17385 44 - -
7900 1.38629 1.38629 1.38629 1.38629
7901 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547
7902 45 3.11902 2.61447 3.16601 0.17385 45 - -
7903 1.38629 1.38629 1.38629 1.38629
7904 0.01829 4.01059 * 1.46634 0.26236 0.00000 *
7905 //
7906 HMMER3/b [3.0 | March 2010]
7907 NAME 3_End_Metazoa_58S_end_fortythreee_long
7908 LENG 45
7909 ALPH DNA
7910 RF no
7911 CS no
7912 MAP yes
7913 DATE Sat Feb 25 14:48:31 2012
7914 NSEQ 3
7915 EFFN 3.000000
7916 CKSUM 1591869727
7917 STATS LOCAL MSV -8.1938 0.72015
7918 STATS LOCAL VITERBI -7.9749 0.72015
7919 STATS LOCAL FORWARD -3.8874 0.72015
7920 HMM A C G T
7921 m->m m->i m->d i->m i->i d->m d->d
7922 COMPO 1.91534 1.38722 1.09397 1.31656
7923 1.38629 1.38629 1.38629 1.38629
7924 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
7925 1 2.86982 3.47591 0.13017 3.36931 1 - -
7926 1.38629 1.38629 1.38629 1.38629
7927 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7928 2 3.30705 0.14631 3.36166 2.73626 2 - -
7929 1.38629 1.38629 1.38629 1.38629
7930 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7931 3 2.86982 3.47591 0.13017 3.36931 3 - -
7932 1.38629 1.38629 1.38629 1.38629
7933 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7934 4 3.30705 0.14631 3.36166 2.73626 4 - -
7935 1.38629 1.38629 1.38629 1.38629
7936 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7937 5 2.97980 2.52563 3.03204 0.19727 5 - -
7938 1.38629 1.38629 1.38629 1.38629
7939 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7940 6 3.30705 0.14631 3.36166 2.73626 6 - -
7941 1.38629 1.38629 1.38629 1.38629
7942 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7943 7 2.97980 2.52563 3.03204 0.19727 7 - -
7944 1.38629 1.38629 1.38629 1.38629
7945 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7946 8 3.30705 0.14631 3.36166 2.73626 8 - -
7947 1.38629 1.38629 1.38629 1.38629
7948 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7949 9 2.86982 3.47591 0.13017 3.36931 9 - -
7950 1.38629 1.38629 1.38629 1.38629
7951 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7952 10 2.86982 3.47591 0.13017 3.36931 10 - -
7953 1.38629 1.38629 1.38629 1.38629
7954 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7955 11 2.86982 3.47591 0.13017 3.36931 11 - -
7956 1.38629 1.38629 1.38629 1.38629
7957 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7958 12 2.97980 2.52563 3.03204 0.19727 12 - -
7959 1.38629 1.38629 1.38629 1.38629
7960 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7961 13 2.97980 2.52563 3.03204 0.19727 13 - -
7962 1.38629 1.38629 1.38629 1.38629
7963 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7964 14 3.30705 0.14631 3.36166 2.73626 14 - -
7965 1.38629 1.38629 1.38629 1.38629
7966 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7967 15 2.97980 2.52563 3.03204 0.19727 15 - -
7968 1.38629 1.38629 1.38629 1.38629
7969 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7970 16 3.30705 0.14631 3.36166 2.73626 16 - -
7971 1.38629 1.38629 1.38629 1.38629
7972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7973 17 2.97980 2.52563 3.03204 0.19727 17 - -
7974 1.38629 1.38629 1.38629 1.38629
7975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7976 18 3.30705 0.14631 3.36166 2.73626 18 - -
7977 1.38629 1.38629 1.38629 1.38629
7978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7979 19 2.86982 3.47591 0.13017 3.36931 19 - -
7980 1.38629 1.38629 1.38629 1.38629
7981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7982 20 2.86982 3.47591 0.13017 3.36931 20 - -
7983 1.38629 1.38629 1.38629 1.38629
7984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7985 21 2.86982 3.47591 0.13017 3.36931 21 - -
7986 1.38629 1.38629 1.38629 1.38629
7987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7988 22 0.15719 3.27118 2.73043 3.16274 22 - -
7989 1.38629 1.38629 1.38629 1.38629
7990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7991 23 2.86982 3.47591 0.13017 3.36931 23 - -
7992 1.38629 1.38629 1.38629 1.38629
7993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7994 24 3.30705 0.14631 3.36166 2.73626 24 - -
7995 1.38629 1.38629 1.38629 1.38629
7996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7997 25 0.15719 3.27118 2.73043 3.16274 25 - -
7998 1.38629 1.38629 1.38629 1.38629
7999 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8000 26 2.97980 2.52563 3.03204 0.19727 26 - -
8001 1.38629 1.38629 1.38629 1.38629
8002 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8003 27 2.86982 3.47591 0.13017 3.36931 27 - -
8004 1.38629 1.38629 1.38629 1.38629
8005 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8006 28 2.97980 2.52563 3.03204 0.19727 28 - -
8007 1.38629 1.38629 1.38629 1.38629
8008 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8009 29 3.30705 0.14631 3.36166 2.73626 29 - -
8010 1.38629 1.38629 1.38629 1.38629
8011 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8012 30 2.97980 2.52563 3.03204 0.19727 30 - -
8013 1.38629 1.38629 1.38629 1.38629
8014 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8015 31 2.86982 3.47591 0.13017 3.36931 31 - -
8016 1.38629 1.38629 1.38629 1.38629
8017 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8018 32 2.97980 2.52563 3.03204 0.19727 32 - -
8019 1.38629 1.38629 1.38629 1.38629
8020 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8021 33 3.30705 0.14631 3.36166 2.73626 33 - -
8022 1.38629 1.38629 1.38629 1.38629
8023 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8024 34 2.97980 2.52563 3.03204 0.19727 34 - -
8025 1.38629 1.38629 1.38629 1.38629
8026 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8027 35 2.86982 3.47591 0.13017 3.36931 35 - -
8028 1.38629 1.38629 1.38629 1.38629
8029 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8030 36 0.15719 3.27118 2.73043 3.16274 36 - -
8031 1.38629 1.38629 1.38629 1.38629
8032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8033 37 2.86982 3.47591 0.13017 3.36931 37 - -
8034 1.38629 1.38629 1.38629 1.38629
8035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8036 38 2.97980 2.52563 3.03204 0.19727 38 - -
8037 1.38629 1.38629 1.38629 1.38629
8038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8039 39 2.86982 3.47591 0.13017 3.36931 39 - -
8040 1.38629 1.38629 1.38629 1.38629
8041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8042 40 2.97980 2.52563 3.03204 0.19727 40 - -
8043 1.38629 1.38629 1.38629 1.38629
8044 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8045 41 3.30705 0.14631 3.36166 2.73626 41 - -
8046 1.38629 1.38629 1.38629 1.38629
8047 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8048 42 2.86982 3.47591 0.13017 3.36931 42 - -
8049 1.38629 1.38629 1.38629 1.38629
8050 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8051 43 2.86982 3.47591 0.13017 3.36931 43 - -
8052 1.38629 1.38629 1.38629 1.38629
8053 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8054 44 0.15719 3.27118 2.73043 3.16274 44 - -
8055 1.38629 1.38629 1.38629 1.38629
8056 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8057 45 0.15719 3.27118 2.73043 3.16274 45 - -
8058 1.38629 1.38629 1.38629 1.38629
8059 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
8060 //
8061 HMMER3/b [3.0 | March 2010]
8062 NAME 3_End_Metazoa_58S_end_fortythreef_long
8063 LENG 45
8064 ALPH DNA
8065 RF no
8066 CS no
8067 MAP yes
8068 DATE Sat Feb 25 14:48:36 2012
8069 NSEQ 3
8070 EFFN 3.000000
8071 CKSUM 739477632
8072 STATS LOCAL MSV -8.2192 0.72023
8073 STATS LOCAL VITERBI -7.9047 0.72023
8074 STATS LOCAL FORWARD -3.7271 0.72023
8075 HMM A C G T
8076 m->m m->i m->d i->m i->i d->m d->d
8077 COMPO 2.10282 1.10194 1.09601 1.55372
8078 1.38629 1.38629 1.38629 1.38629
8079 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
8080 1 2.86982 3.47591 0.13017 3.36931 1 - -
8081 1.38629 1.38629 1.38629 1.38629
8082 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8083 2 3.30705 0.14631 3.36166 2.73626 2 - -
8084 1.38629 1.38629 1.38629 1.38629
8085 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8086 3 2.86982 3.47591 0.13017 3.36931 3 - -
8087 1.38629 1.38629 1.38629 1.38629
8088 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8089 4 3.30705 0.14631 3.36166 2.73626 4 - -
8090 1.38629 1.38629 1.38629 1.38629
8091 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8092 5 2.97980 2.52563 3.03204 0.19727 5 - -
8093 1.38629 1.38629 1.38629 1.38629
8094 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8095 6 3.30705 0.14631 3.36166 2.73626 6 - -
8096 1.38629 1.38629 1.38629 1.38629
8097 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8098 7 3.30705 0.14631 3.36166 2.73626 7 - -
8099 1.38629 1.38629 1.38629 1.38629
8100 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8101 8 3.30705 0.14631 3.36166 2.73626 8 - -
8102 1.38629 1.38629 1.38629 1.38629
8103 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8104 9 2.86982 3.47591 0.13017 3.36931 9 - -
8105 1.38629 1.38629 1.38629 1.38629
8106 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8107 10 2.86982 3.47591 0.13017 3.36931 10 - -
8108 1.38629 1.38629 1.38629 1.38629
8109 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8110 11 2.86982 3.47591 0.13017 3.36931 11 - -
8111 1.38629 1.38629 1.38629 1.38629
8112 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8113 12 2.97980 2.52563 3.03204 0.19727 12 - -
8114 1.38629 1.38629 1.38629 1.38629
8115 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8116 13 3.30705 0.14631 3.36166 2.73626 13 - -
8117 1.38629 1.38629 1.38629 1.38629
8118 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8119 14 2.97980 2.52563 3.03204 0.19727 14 - -
8120 1.38629 1.38629 1.38629 1.38629
8121 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8122 15 2.97980 2.52563 3.03204 0.19727 15 - -
8123 1.38629 1.38629 1.38629 1.38629
8124 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8125 16 3.30705 0.14631 3.36166 2.73626 16 - -
8126 1.38629 1.38629 1.38629 1.38629
8127 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8128 17 3.30705 0.14631 3.36166 2.73626 17 - -
8129 1.38629 1.38629 1.38629 1.38629
8130 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8131 18 3.30705 0.14631 3.36166 2.73626 18 - -
8132 1.38629 1.38629 1.38629 1.38629
8133 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8134 19 2.86982 3.47591 0.13017 3.36931 19 - -
8135 1.38629 1.38629 1.38629 1.38629
8136 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8137 20 2.86982 3.47591 0.13017 3.36931 20 - -
8138 1.38629 1.38629 1.38629 1.38629
8139 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8140 21 2.86982 3.47591 0.13017 3.36931 21 - -
8141 1.38629 1.38629 1.38629 1.38629
8142 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8143 22 0.15719 3.27118 2.73043 3.16274 22 - -
8144 1.38629 1.38629 1.38629 1.38629
8145 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8146 23 2.86982 3.47591 0.13017 3.36931 23 - -
8147 1.38629 1.38629 1.38629 1.38629
8148 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8149 24 3.30705 0.14631 3.36166 2.73626 24 - -
8150 1.38629 1.38629 1.38629 1.38629
8151 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8152 25 0.15719 3.27118 2.73043 3.16274 25 - -
8153 1.38629 1.38629 1.38629 1.38629
8154 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8155 26 3.30705 0.14631 3.36166 2.73626 26 - -
8156 1.38629 1.38629 1.38629 1.38629
8157 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8158 27 2.86982 3.47591 0.13017 3.36931 27 - -
8159 1.38629 1.38629 1.38629 1.38629
8160 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8161 28 2.97980 2.52563 3.03204 0.19727 28 - -
8162 1.38629 1.38629 1.38629 1.38629
8163 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8164 29 3.30705 0.14631 3.36166 2.73626 29 - -
8165 1.38629 1.38629 1.38629 1.38629
8166 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8167 30 2.97980 2.52563 3.03204 0.19727 30 - -
8168 1.38629 1.38629 1.38629 1.38629
8169 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8170 31 2.86982 3.47591 0.13017 3.36931 31 - -
8171 1.38629 1.38629 1.38629 1.38629
8172 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8173 32 2.97980 2.52563 3.03204 0.19727 32 - -
8174 1.38629 1.38629 1.38629 1.38629
8175 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8176 33 3.30705 0.14631 3.36166 2.73626 33 - -
8177 1.38629 1.38629 1.38629 1.38629
8178 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8179 34 2.97980 2.52563 3.03204 0.19727 34 - -
8180 1.38629 1.38629 1.38629 1.38629
8181 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8182 35 2.86982 3.47591 0.13017 3.36931 35 - -
8183 1.38629 1.38629 1.38629 1.38629
8184 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8185 36 0.15719 3.27118 2.73043 3.16274 36 - -
8186 1.38629 1.38629 1.38629 1.38629
8187 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8188 37 2.86982 3.47591 0.13017 3.36931 37 - -
8189 1.38629 1.38629 1.38629 1.38629
8190 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8191 38 3.30705 0.14631 3.36166 2.73626 38 - -
8192 1.38629 1.38629 1.38629 1.38629
8193 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8194 39 2.86982 3.47591 0.13017 3.36931 39 - -
8195 1.38629 1.38629 1.38629 1.38629
8196 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8197 40 2.97980 2.52563 3.03204 0.19727 40 - -
8198 1.38629 1.38629 1.38629 1.38629
8199 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8200 41 3.30705 0.14631 3.36166 2.73626 41 - -
8201 1.38629 1.38629 1.38629 1.38629
8202 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8203 42 2.86982 3.47591 0.13017 3.36931 42 - -
8204 1.38629 1.38629 1.38629 1.38629
8205 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8206 43 2.86982 3.47591 0.13017 3.36931 43 - -
8207 1.38629 1.38629 1.38629 1.38629
8208 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8209 44 3.30705 0.14631 3.36166 2.73626 44 - -
8210 1.38629 1.38629 1.38629 1.38629
8211 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
8212 45 0.70020 2.19823 2.14894 1.28770 45 - -
8213 1.38629 1.38629 1.38629 1.38629
8214 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
8215 //
8216 HMMER3/b [3.0 | March 2010]
8217 NAME 3_End_Metazoa_58S_end_fortythreeg_long
8218 LENG 45
8219 ALPH DNA
8220 RF no
8221 CS no
8222 MAP yes
8223 DATE Sat Feb 25 14:48:42 2012
8224 NSEQ 2
8225 EFFN 2.000000
8226 CKSUM 1519089656
8227 STATS LOCAL MSV -7.5630 0.72790
8228 STATS LOCAL VITERBI -8.4077 0.72790
8229 STATS LOCAL FORWARD -3.2043 0.72790
8230 HMM A C G T
8231 m->m m->i m->d i->m i->i d->m d->d
8232 COMPO 1.82883 1.28308 1.21809 1.32268
8233 1.38629 1.38629 1.38629 1.38629
8234 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
8235 1 2.53331 3.02441 0.20344 2.88069 1 - -
8236 1.38629 1.38629 1.38629 1.38629
8237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8238 2 2.81865 0.23582 2.88868 2.35662 2 - -
8239 1.38629 1.38629 1.38629 1.38629
8240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8241 3 2.53331 3.02441 0.20344 2.88069 3 - -
8242 1.38629 1.38629 1.38629 1.38629
8243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8244 4 2.81865 0.23582 2.88868 2.35662 4 - -
8245 1.38629 1.38629 1.38629 1.38629
8246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8247 5 2.57915 2.25909 2.64442 0.28946 5 - -
8248 1.38629 1.38629 1.38629 1.38629
8249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8250 6 2.81865 0.23582 2.88868 2.35662 6 - -
8251 1.38629 1.38629 1.38629 1.38629
8252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8253 7 2.57915 2.25909 2.64442 0.28946 7 - -
8254 1.38629 1.38629 1.38629 1.38629
8255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8256 8 2.57915 2.25909 2.64442 0.28946 8 - -
8257 1.38629 1.38629 1.38629 1.38629
8258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8259 9 2.53331 3.02441 0.20344 2.88069 9 - -
8260 1.38629 1.38629 1.38629 1.38629
8261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8262 10 2.53331 3.02441 0.20344 2.88069 10 - -
8263 1.38629 1.38629 1.38629 1.38629
8264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8265 11 2.53331 3.02441 0.20344 2.88069 11 - -
8266 1.38629 1.38629 1.38629 1.38629
8267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8268 12 2.81865 0.23582 2.88868 2.35662 12 - -
8269 1.38629 1.38629 1.38629 1.38629
8270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8271 13 0.23862 2.84929 2.43386 2.70756 13 - -
8272 1.38629 1.38629 1.38629 1.38629
8273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8274 14 2.57915 2.25909 2.64442 0.28946 14 - -
8275 1.38629 1.38629 1.38629 1.38629
8276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8277 15 2.57915 2.25909 2.64442 0.28946 15 - -
8278 1.38629 1.38629 1.38629 1.38629
8279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8280 16 2.81865 0.23582 2.88868 2.35662 16 - -
8281 1.38629 1.38629 1.38629 1.38629
8282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8283 17 2.81865 0.23582 2.88868 2.35662 17 - -
8284 1.38629 1.38629 1.38629 1.38629
8285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8286 18 2.81865 0.23582 2.88868 2.35662 18 - -
8287 1.38629 1.38629 1.38629 1.38629
8288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8289 19 0.23862 2.84929 2.43386 2.70756 19 - -
8290 1.38629 1.38629 1.38629 1.38629
8291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8292 20 2.53331 3.02441 0.20344 2.88069 20 - -
8293 1.38629 1.38629 1.38629 1.38629
8294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8295 21 2.53331 3.02441 0.20344 2.88069 21 - -
8296 1.38629 1.38629 1.38629 1.38629
8297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8298 22 0.23862 2.84929 2.43386 2.70756 22 - -
8299 1.38629 1.38629 1.38629 1.38629
8300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8301 23 2.53331 3.02441 0.20344 2.88069 23 - -
8302 1.38629 1.38629 1.38629 1.38629
8303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8304 24 2.81865 0.23582 2.88868 2.35662 24 - -
8305 1.38629 1.38629 1.38629 1.38629
8306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8307 25 0.23862 2.84929 2.43386 2.70756 25 - -
8308 1.38629 1.38629 1.38629 1.38629
8309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8310 26 2.81865 0.23582 2.88868 2.35662 26 - -
8311 1.38629 1.38629 1.38629 1.38629
8312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8313 27 2.53331 3.02441 0.20344 2.88069 27 - -
8314 1.38629 1.38629 1.38629 1.38629
8315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8316 28 2.57915 2.25909 2.64442 0.28946 28 - -
8317 1.38629 1.38629 1.38629 1.38629
8318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8319 29 2.81865 0.23582 2.88868 2.35662 29 - -
8320 1.38629 1.38629 1.38629 1.38629
8321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8322 30 2.57915 2.25909 2.64442 0.28946 30 - -
8323 1.38629 1.38629 1.38629 1.38629
8324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8325 31 2.53331 3.02441 0.20344 2.88069 31 - -
8326 1.38629 1.38629 1.38629 1.38629
8327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8328 32 2.57915 2.25909 2.64442 0.28946 32 - -
8329 1.38629 1.38629 1.38629 1.38629
8330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8331 33 2.81865 0.23582 2.88868 2.35662 33 - -
8332 1.38629 1.38629 1.38629 1.38629
8333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8334 34 2.57915 2.25909 2.64442 0.28946 34 - -
8335 1.38629 1.38629 1.38629 1.38629
8336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8337 35 2.53331 3.02441 0.20344 2.88069 35 - -
8338 1.38629 1.38629 1.38629 1.38629
8339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8340 36 0.23862 2.84929 2.43386 2.70756 36 - -
8341 1.38629 1.38629 1.38629 1.38629
8342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8343 37 2.53331 3.02441 0.20344 2.88069 37 - -
8344 1.38629 1.38629 1.38629 1.38629
8345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8346 38 2.81865 0.23582 2.88868 2.35662 38 - -
8347 1.38629 1.38629 1.38629 1.38629
8348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8349 39 2.53331 3.02441 0.20344 2.88069 39 - -
8350 1.38629 1.38629 1.38629 1.38629
8351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8352 40 2.57915 2.25909 2.64442 0.28946 40 - -
8353 1.38629 1.38629 1.38629 1.38629
8354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8355 41 2.81865 0.23582 2.88868 2.35662 41 - -
8356 1.38629 1.38629 1.38629 1.38629
8357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8358 42 2.53331 3.02441 0.20344 2.88069 42 - -
8359 1.38629 1.38629 1.38629 1.38629
8360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8361 43 2.57915 2.25909 2.64442 0.28946 43 - -
8362 1.38629 1.38629 1.38629 1.38629
8363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8364 44 2.57915 2.25909 2.64442 0.28946 44 - -
8365 1.38629 1.38629 1.38629 1.38629
8366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8367 45 2.57915 2.25909 2.64442 0.28946 45 - -
8368 1.38629 1.38629 1.38629 1.38629
8369 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
8370 //
8371 HMMER3/b [3.0 | March 2010]
8372 NAME 3_End_Metazoa_58S_end_fortythreeh_long
8373 LENG 45
8374 ALPH DNA
8375 RF no
8376 CS no
8377 MAP yes
8378 DATE Sat Feb 25 14:48:47 2012
8379 NSEQ 8
8380 EFFN 3.269531
8381 CKSUM 3808685909
8382 STATS LOCAL MSV -8.1027 0.71933
8383 STATS LOCAL VITERBI -7.8398 0.71933
8384 STATS LOCAL FORWARD -3.7438 0.71933
8385 HMM A C G T
8386 m->m m->i m->d i->m i->i d->m d->d
8387 COMPO 1.93688 1.31183 1.25872 1.19567
8388 1.38629 1.38629 1.38629 1.38629
8389 0.03725 4.00178 4.00178 1.46634 0.26236 0.00000 *
8390 1 2.93551 3.57031 0.11909 3.47317 1 - -
8391 1.38629 1.38629 1.38629 1.38629
8392 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8393 2 3.41331 0.13259 3.46361 2.81457 2 - -
8394 1.38629 1.38629 1.38629 1.38629
8395 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8396 3 2.93551 3.57031 0.11909 3.47317 3 - -
8397 1.38629 1.38629 1.38629 1.38629
8398 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8399 4 3.41331 0.13259 3.46361 2.81457 4 - -
8400 1.38629 1.38629 1.38629 1.38629
8401 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8402 5 3.07131 2.58413 3.12013 0.18149 5 - -
8403 1.38629 1.38629 1.38629 1.38629
8404 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8405 6 3.41331 0.13259 3.46361 2.81457 6 - -
8406 1.38629 1.38629 1.38629 1.38629
8407 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8408 7 3.41331 0.13259 3.46361 2.81457 7 - -
8409 1.38629 1.38629 1.38629 1.38629
8410 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8411 8 3.07131 2.58413 3.12013 0.18149 8 - -
8412 1.38629 1.38629 1.38629 1.38629
8413 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8414 9 2.93551 3.57031 0.11909 3.47317 9 - -
8415 1.38629 1.38629 1.38629 1.38629
8416 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8417 10 2.93551 3.57031 0.11909 3.47317 10 - -
8418 1.38629 1.38629 1.38629 1.38629
8419 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8420 11 2.93551 3.57031 0.11909 3.47317 11 - -
8421 1.38629 1.38629 1.38629 1.38629
8422 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8423 12 3.07131 2.58413 3.12013 0.18149 12 - -
8424 1.38629 1.38629 1.38629 1.38629
8425 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8426 13 0.14418 3.36310 2.79076 3.26314 13 - -
8427 1.38629 1.38629 1.38629 1.38629
8428 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8429 14 3.07131 2.58413 3.12013 0.18149 14 - -
8430 1.38629 1.38629 1.38629 1.38629
8431 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8432 15 3.07131 2.58413 3.12013 0.18149 15 - -
8433 1.38629 1.38629 1.38629 1.38629
8434 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8435 16 3.41331 0.13259 3.46361 2.81457 16 - -
8436 1.38629 1.38629 1.38629 1.38629
8437 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8438 17 3.41331 0.13259 3.46361 2.81457 17 - -
8439 1.38629 1.38629 1.38629 1.38629
8440 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8441 18 3.41331 0.13259 3.46361 2.81457 18 - -
8442 1.38629 1.38629 1.38629 1.38629
8443 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8444 19 0.14418 3.36310 2.79076 3.26314 19 - -
8445 1.38629 1.38629 1.38629 1.38629
8446 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8447 20 2.93551 3.57031 0.11909 3.47317 20 - -
8448 1.38629 1.38629 1.38629 1.38629
8449 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8450 21 2.93551 3.57031 0.11909 3.47317 21 - -
8451 1.38629 1.38629 1.38629 1.38629
8452 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8453 22 0.14418 3.36310 2.79076 3.26314 22 - -
8454 1.38629 1.38629 1.38629 1.38629
8455 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8456 23 2.93551 3.57031 0.11909 3.47317 23 - -
8457 1.38629 1.38629 1.38629 1.38629
8458 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8459 24 3.41331 0.13259 3.46361 2.81457 24 - -
8460 1.38629 1.38629 1.38629 1.38629
8461 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8462 25 0.14418 3.36310 2.79076 3.26314 25 - -
8463 1.38629 1.38629 1.38629 1.38629
8464 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8465 26 3.07131 2.58413 3.12013 0.18149 26 - -
8466 1.38629 1.38629 1.38629 1.38629
8467 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8468 27 2.93551 3.57031 0.11909 3.47317 27 - -
8469 1.38629 1.38629 1.38629 1.38629
8470 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8471 28 3.07131 2.58413 3.12013 0.18149 28 - -
8472 1.38629 1.38629 1.38629 1.38629
8473 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8474 29 3.41331 0.13259 3.46361 2.81457 29 - -
8475 1.38629 1.38629 1.38629 1.38629
8476 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8477 30 3.07131 2.58413 3.12013 0.18149 30 - -
8478 1.38629 1.38629 1.38629 1.38629
8479 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8480 31 2.93551 3.57031 0.11909 3.47317 31 - -
8481 1.38629 1.38629 1.38629 1.38629
8482 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8483 32 3.07131 2.58413 3.12013 0.18149 32 - -
8484 1.38629 1.38629 1.38629 1.38629
8485 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8486 33 3.41331 0.13259 3.46361 2.81457 33 - -
8487 1.38629 1.38629 1.38629 1.38629
8488 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8489 34 3.07131 2.58413 3.12013 0.18149 34 - -
8490 1.38629 1.38629 1.38629 1.38629
8491 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8492 35 3.41331 0.13259 3.46361 2.81457 35 - -
8493 1.38629 1.38629 1.38629 1.38629
8494 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8495 36 0.14418 3.36310 2.79076 3.26314 36 - -
8496 1.38629 1.38629 1.38629 1.38629
8497 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8498 37 2.93551 3.57031 0.11909 3.47317 37 - -
8499 1.38629 1.38629 1.38629 1.38629
8500 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8501 38 3.07131 2.58413 3.12013 0.18149 38 - -
8502 1.38629 1.38629 1.38629 1.38629
8503 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8504 39 2.93551 3.57031 0.11909 3.47317 39 - -
8505 1.38629 1.38629 1.38629 1.38629
8506 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8507 40 3.07131 2.58413 3.12013 0.18149 40 - -
8508 1.38629 1.38629 1.38629 1.38629
8509 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8510 41 3.41331 0.13259 3.46361 2.81457 41 - -
8511 1.38629 1.38629 1.38629 1.38629
8512 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8513 42 2.93551 3.57031 0.11909 3.47317 42 - -
8514 1.38629 1.38629 1.38629 1.38629
8515 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8516 43 3.07131 2.58413 3.12013 0.18149 43 - -
8517 1.38629 1.38629 1.38629 1.38629
8518 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8519 44 3.07131 2.58413 3.12013 0.18149 44 - -
8520 1.38629 1.38629 1.38629 1.38629
8521 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
8522 45 3.07131 2.58413 3.12013 0.18149 45 - -
8523 1.38629 1.38629 1.38629 1.38629
8524 0.01880 3.98333 * 1.46634 0.26236 0.00000 *
8525 //
8526 HMMER3/b [3.0 | March 2010]
8527 NAME 3_End_Metazoa_58S_end_fortythreei_long
8528 LENG 45
8529 ALPH DNA
8530 RF no
8531 CS no
8532 MAP yes
8533 DATE Sat Feb 25 14:48:54 2012
8534 NSEQ 5
8535 EFFN 3.481445
8536 CKSUM 3758960601
8537 STATS LOCAL MSV -7.3778 0.71931
8538 STATS LOCAL VITERBI -7.9054 0.71931
8539 STATS LOCAL FORWARD -4.2141 0.71931
8540 HMM A C G T
8541 m->m m->i m->d i->m i->i d->m d->d
8542 COMPO 1.93383 1.31332 1.19239 1.26236
8543 1.38629 1.38629 1.38629 1.38629
8544 0.03584 4.03979 4.03979 1.46634 0.26236 0.00000 *
8545 1 2.98175 3.63775 0.11183 3.54766 1 - -
8546 1.38629 1.38629 1.38629 1.38629
8547 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8548 2 3.49007 0.12362 3.53707 2.87028 2 - -
8549 1.38629 1.38629 1.38629 1.38629
8550 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8551 3 2.98175 3.63775 0.11183 3.54766 3 - -
8552 1.38629 1.38629 1.38629 1.38629
8553 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8554 4 3.49007 0.12362 3.53707 2.87028 4 - -
8555 1.38629 1.38629 1.38629 1.38629
8556 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8557 5 3.13887 2.62707 3.18509 0.17078 5 - -
8558 1.38629 1.38629 1.38629 1.38629
8559 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8560 6 3.49007 0.12362 3.53707 2.87028 6 - -
8561 1.38629 1.38629 1.38629 1.38629
8562 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8563 7 2.46252 0.72637 2.53467 1.04461 7 - -
8564 1.38629 1.38629 1.38629 1.38629
8565 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8566 8 3.49007 0.12362 3.53707 2.87028 8 - -
8567 1.38629 1.38629 1.38629 1.38629
8568 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8569 9 3.13887 2.62707 3.18509 0.17078 9 - -
8570 1.38629 1.38629 1.38629 1.38629
8571 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8572 10 2.98175 3.63775 0.11183 3.54766 10 - -
8573 1.38629 1.38629 1.38629 1.38629
8574 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8575 11 2.98175 3.63775 0.11183 3.54766 11 - -
8576 1.38629 1.38629 1.38629 1.38629
8577 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8578 12 3.13887 2.62707 3.18509 0.17078 12 - -
8579 1.38629 1.38629 1.38629 1.38629
8580 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8581 13 3.13887 2.62707 3.18509 0.17078 13 - -
8582 1.38629 1.38629 1.38629 1.38629
8583 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8584 14 3.49007 0.12362 3.53707 2.87028 14 - -
8585 1.38629 1.38629 1.38629 1.38629
8586 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8587 15 3.13887 2.62707 3.18509 0.17078 15 - -
8588 1.38629 1.38629 1.38629 1.38629
8589 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8590 16 3.49007 0.12362 3.53707 2.87028 16 - -
8591 1.38629 1.38629 1.38629 1.38629
8592 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8593 17 3.49007 0.12362 3.53707 2.87028 17 - -
8594 1.38629 1.38629 1.38629 1.38629
8595 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8596 18 0.13553 3.42977 2.83398 3.33617 18 - -
8597 1.38629 1.38629 1.38629 1.38629
8598 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8599 19 2.98175 3.63775 0.11183 3.54766 19 - -
8600 1.38629 1.38629 1.38629 1.38629
8601 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8602 20 2.98175 3.63775 0.11183 3.54766 20 - -
8603 1.38629 1.38629 1.38629 1.38629
8604 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8605 21 2.98175 3.63775 0.11183 3.54766 21 - -
8606 1.38629 1.38629 1.38629 1.38629
8607 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8608 22 0.13553 3.42977 2.83398 3.33617 22 - -
8609 1.38629 1.38629 1.38629 1.38629
8610 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8611 23 2.98175 3.63775 0.11183 3.54766 23 - -
8612 1.38629 1.38629 1.38629 1.38629
8613 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8614 24 3.49007 0.12362 3.53707 2.87028 24 - -
8615 1.38629 1.38629 1.38629 1.38629
8616 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8617 25 0.13553 3.42977 2.83398 3.33617 25 - -
8618 1.38629 1.38629 1.38629 1.38629
8619 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8620 26 3.13887 2.62707 3.18509 0.17078 26 - -
8621 1.38629 1.38629 1.38629 1.38629
8622 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8623 27 2.98175 3.63775 0.11183 3.54766 27 - -
8624 1.38629 1.38629 1.38629 1.38629
8625 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8626 28 3.13887 2.62707 3.18509 0.17078 28 - -
8627 1.38629 1.38629 1.38629 1.38629
8628 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8629 29 2.46252 0.72637 2.53467 1.04461 29 - -
8630 1.38629 1.38629 1.38629 1.38629
8631 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8632 30 3.13887 2.62707 3.18509 0.17078 30 - -
8633 1.38629 1.38629 1.38629 1.38629
8634 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8635 31 2.98175 3.63775 0.11183 3.54766 31 - -
8636 1.38629 1.38629 1.38629 1.38629
8637 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8638 32 3.13887 2.62707 3.18509 0.17078 32 - -
8639 1.38629 1.38629 1.38629 1.38629
8640 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8641 33 3.49007 0.12362 3.53707 2.87028 33 - -
8642 1.38629 1.38629 1.38629 1.38629
8643 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8644 34 3.13887 2.62707 3.18509 0.17078 34 - -
8645 1.38629 1.38629 1.38629 1.38629
8646 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8647 35 2.98175 3.63775 0.11183 3.54766 35 - -
8648 1.38629 1.38629 1.38629 1.38629
8649 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8650 36 0.13553 3.42977 2.83398 3.33617 36 - -
8651 1.38629 1.38629 1.38629 1.38629
8652 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8653 37 2.98175 3.63775 0.11183 3.54766 37 - -
8654 1.38629 1.38629 1.38629 1.38629
8655 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8656 38 3.49007 0.12362 3.53707 2.87028 38 - -
8657 1.38629 1.38629 1.38629 1.38629
8658 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8659 39 2.98175 3.63775 0.11183 3.54766 39 - -
8660 1.38629 1.38629 1.38629 1.38629
8661 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8662 40 3.13887 2.62707 3.18509 0.17078 40 - -
8663 1.38629 1.38629 1.38629 1.38629
8664 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8665 41 3.49007 0.12362 3.53707 2.87028 41 - -
8666 1.38629 1.38629 1.38629 1.38629
8667 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8668 42 0.13553 3.42977 2.83398 3.33617 42 - -
8669 1.38629 1.38629 1.38629 1.38629
8670 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8671 43 3.13887 2.62707 3.18509 0.17078 43 - -
8672 1.38629 1.38629 1.38629 1.38629
8673 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8674 44 2.98175 3.63775 0.11183 3.54766 44 - -
8675 1.38629 1.38629 1.38629 1.38629
8676 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547
8677 45 3.13887 2.62707 3.18509 0.17078 45 - -
8678 1.38629 1.38629 1.38629 1.38629
8679 0.01808 4.02203 * 1.46634 0.26236 0.00000 *
8680 //
8681 HMMER3/b [3.0 | March 2010]
8682 NAME 3_End_Metazoa_58S_end_fortythreej_long
8683 LENG 45
8684 ALPH DNA
8685 RF no
8686 CS no
8687 MAP yes
8688 DATE Sat Feb 25 14:48:59 2012
8689 NSEQ 4
8690 EFFN 3.175781
8691 CKSUM 3177132795
8692 STATS LOCAL MSV -8.0711 0.71931
8693 STATS LOCAL VITERBI -7.8271 0.71931
8694 STATS LOCAL FORWARD -4.1706 0.71931
8695 HMM A C G T
8696 m->m m->i m->d i->m i->i d->m d->d
8697 COMPO 1.82240 1.26363 1.14453 1.43816
8698 1.38629 1.38629 1.38629 1.38629
8699 0.03791 3.98449 3.98449 1.46634 0.26236 0.00000 *
8700 1 2.91360 3.53861 0.12268 3.43825 1 - -
8701 1.38629 1.38629 1.38629 1.38629
8702 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8703 2 3.37748 0.13704 3.42926 2.78832 2 - -
8704 1.38629 1.38629 1.38629 1.38629
8705 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8706 3 2.91360 3.53861 0.12268 3.43825 3 - -
8707 1.38629 1.38629 1.38629 1.38629
8708 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8709 4 3.37748 0.13704 3.42926 2.78832 4 - -
8710 1.38629 1.38629 1.38629 1.38629
8711 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8712 5 3.04021 2.56430 3.09020 0.18668 5 - -
8713 1.38629 1.38629 1.38629 1.38629
8714 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8715 6 3.37748 0.13704 3.42926 2.78832 6 - -
8716 1.38629 1.38629 1.38629 1.38629
8717 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8718 7 3.04021 2.56430 3.09020 0.18668 7 - -
8719 1.38629 1.38629 1.38629 1.38629
8720 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8721 8 3.37748 0.13704 3.42926 2.78832 8 - -
8722 1.38629 1.38629 1.38629 1.38629
8723 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8724 9 3.04021 2.56430 3.09020 0.18668 9 - -
8725 1.38629 1.38629 1.38629 1.38629
8726 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8727 10 2.91360 3.53861 0.12268 3.43825 10 - -
8728 1.38629 1.38629 1.38629 1.38629
8729 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8730 11 2.91360 3.53861 0.12268 3.43825 11 - -
8731 1.38629 1.38629 1.38629 1.38629
8732 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8733 12 0.14843 3.33206 2.77050 3.22920 12 - -
8734 1.38629 1.38629 1.38629 1.38629
8735 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8736 13 3.04021 2.56430 3.09020 0.18668 13 - -
8737 1.38629 1.38629 1.38629 1.38629
8738 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8739 14 3.37748 0.13704 3.42926 2.78832 14 - -
8740 1.38629 1.38629 1.38629 1.38629
8741 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8742 15 3.37748 0.13704 3.42926 2.78832 15 - -
8743 1.38629 1.38629 1.38629 1.38629
8744 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8745 16 3.37748 0.13704 3.42926 2.78832 16 - -
8746 1.38629 1.38629 1.38629 1.38629
8747 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8748 17 3.37748 0.13704 3.42926 2.78832 17 - -
8749 1.38629 1.38629 1.38629 1.38629
8750 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8751 18 0.14843 3.33206 2.77050 3.22920 18 - -
8752 1.38629 1.38629 1.38629 1.38629
8753 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8754 19 2.91360 3.53861 0.12268 3.43825 19 - -
8755 1.38629 1.38629 1.38629 1.38629
8756 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8757 20 2.91360 3.53861 0.12268 3.43825 20 - -
8758 1.38629 1.38629 1.38629 1.38629
8759 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8760 21 2.91360 3.53861 0.12268 3.43825 21 - -
8761 1.38629 1.38629 1.38629 1.38629
8762 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8763 22 0.14843 3.33206 2.77050 3.22920 22 - -
8764 1.38629 1.38629 1.38629 1.38629
8765 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8766 23 2.91360 3.53861 0.12268 3.43825 23 - -
8767 1.38629 1.38629 1.38629 1.38629
8768 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8769 24 3.37748 0.13704 3.42926 2.78832 24 - -
8770 1.38629 1.38629 1.38629 1.38629
8771 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8772 25 0.14843 3.33206 2.77050 3.22920 25 - -
8773 1.38629 1.38629 1.38629 1.38629
8774 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8775 26 3.04021 2.56430 3.09020 0.18668 26 - -
8776 1.38629 1.38629 1.38629 1.38629
8777 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8778 27 2.91360 3.53861 0.12268 3.43825 27 - -
8779 1.38629 1.38629 1.38629 1.38629
8780 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8781 28 3.04021 2.56430 3.09020 0.18668 28 - -
8782 1.38629 1.38629 1.38629 1.38629
8783 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8784 29 3.37748 0.13704 3.42926 2.78832 29 - -
8785 1.38629 1.38629 1.38629 1.38629
8786 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8787 30 3.04021 2.56430 3.09020 0.18668 30 - -
8788 1.38629 1.38629 1.38629 1.38629
8789 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8790 31 2.91360 3.53861 0.12268 3.43825 31 - -
8791 1.38629 1.38629 1.38629 1.38629
8792 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8793 32 3.04021 2.56430 3.09020 0.18668 32 - -
8794 1.38629 1.38629 1.38629 1.38629
8795 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8796 33 3.37748 0.13704 3.42926 2.78832 33 - -
8797 1.38629 1.38629 1.38629 1.38629
8798 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8799 34 3.04021 2.56430 3.09020 0.18668 34 - -
8800 1.38629 1.38629 1.38629 1.38629
8801 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8802 35 2.91360 3.53861 0.12268 3.43825 35 - -
8803 1.38629 1.38629 1.38629 1.38629
8804 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8805 36 0.14843 3.33206 2.77050 3.22920 36 - -
8806 1.38629 1.38629 1.38629 1.38629
8807 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8808 37 2.91360 3.53861 0.12268 3.43825 37 - -
8809 1.38629 1.38629 1.38629 1.38629
8810 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8811 38 3.04021 2.56430 3.09020 0.18668 38 - -
8812 1.38629 1.38629 1.38629 1.38629
8813 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8814 39 2.91360 3.53861 0.12268 3.43825 39 - -
8815 1.38629 1.38629 1.38629 1.38629
8816 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8817 40 3.04021 2.56430 3.09020 0.18668 40 - -
8818 1.38629 1.38629 1.38629 1.38629
8819 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8820 41 3.37748 0.13704 3.42926 2.78832 41 - -
8821 1.38629 1.38629 1.38629 1.38629
8822 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8823 42 2.91360 3.53861 0.12268 3.43825 42 - -
8824 1.38629 1.38629 1.38629 1.38629
8825 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8826 43 3.37748 0.13704 3.42926 2.78832 43 - -
8827 1.38629 1.38629 1.38629 1.38629
8828 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8829 44 2.91360 3.53861 0.12268 3.43825 44 - -
8830 1.38629 1.38629 1.38629 1.38629
8831 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
8832 45 0.14843 3.33206 2.77050 3.22920 45 - -
8833 1.38629 1.38629 1.38629 1.38629
8834 0.01914 3.96571 * 1.46634 0.26236 0.00000 *
8835 //
8836 HMMER3/b [3.0 | March 2010]
8837 NAME 3_End_Metazoa_58S_end_fortythreek_long
8838 LENG 45
8839 ALPH DNA
8840 RF no
8841 CS no
8842 MAP yes
8843 DATE Sat Feb 25 14:49:03 2012
8844 NSEQ 2
8845 EFFN 2.000000
8846 CKSUM 1955569616
8847 STATS LOCAL MSV -7.4824 0.72803
8848 STATS LOCAL VITERBI -8.2186 0.72803
8849 STATS LOCAL FORWARD -3.5060 0.72803
8850 HMM A C G T
8851 m->m m->i m->d i->m i->i d->m d->d
8852 COMPO 1.74000 1.39139 1.21494 1.27646
8853 1.38629 1.38629 1.38629 1.38629
8854 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
8855 1 2.53331 3.02441 0.20344 2.88069 1 - -
8856 1.38629 1.38629 1.38629 1.38629
8857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8858 2 2.81865 0.23582 2.88868 2.35662 2 - -
8859 1.38629 1.38629 1.38629 1.38629
8860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8861 3 2.53331 3.02441 0.20344 2.88069 3 - -
8862 1.38629 1.38629 1.38629 1.38629
8863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8864 4 2.81865 0.23582 2.88868 2.35662 4 - -
8865 1.38629 1.38629 1.38629 1.38629
8866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8867 5 2.57915 2.25909 2.64442 0.28946 5 - -
8868 1.38629 1.38629 1.38629 1.38629
8869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8870 6 2.57915 2.25909 2.64442 0.28946 6 - -
8871 1.38629 1.38629 1.38629 1.38629
8872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8873 7 2.57915 2.25909 2.64442 0.28946 7 - -
8874 1.38629 1.38629 1.38629 1.38629
8875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8876 8 2.81865 0.23582 2.88868 2.35662 8 - -
8877 1.38629 1.38629 1.38629 1.38629
8878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8879 9 2.57915 2.25909 2.64442 0.28946 9 - -
8880 1.38629 1.38629 1.38629 1.38629
8881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8882 10 2.53331 3.02441 0.20344 2.88069 10 - -
8883 1.38629 1.38629 1.38629 1.38629
8884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8885 11 2.53331 3.02441 0.20344 2.88069 11 - -
8886 1.38629 1.38629 1.38629 1.38629
8887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8888 12 0.23862 2.84929 2.43386 2.70756 12 - -
8889 1.38629 1.38629 1.38629 1.38629
8890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8891 13 2.57915 2.25909 2.64442 0.28946 13 - -
8892 1.38629 1.38629 1.38629 1.38629
8893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8894 14 0.23862 2.84929 2.43386 2.70756 14 - -
8895 1.38629 1.38629 1.38629 1.38629
8896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8897 15 2.57915 2.25909 2.64442 0.28946 15 - -
8898 1.38629 1.38629 1.38629 1.38629
8899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8900 16 2.81865 0.23582 2.88868 2.35662 16 - -
8901 1.38629 1.38629 1.38629 1.38629
8902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8903 17 2.81865 0.23582 2.88868 2.35662 17 - -
8904 1.38629 1.38629 1.38629 1.38629
8905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8906 18 0.23862 2.84929 2.43386 2.70756 18 - -
8907 1.38629 1.38629 1.38629 1.38629
8908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8909 19 2.53331 3.02441 0.20344 2.88069 19 - -
8910 1.38629 1.38629 1.38629 1.38629
8911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8912 20 2.53331 3.02441 0.20344 2.88069 20 - -
8913 1.38629 1.38629 1.38629 1.38629
8914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8915 21 2.53331 3.02441 0.20344 2.88069 21 - -
8916 1.38629 1.38629 1.38629 1.38629
8917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8918 22 0.23862 2.84929 2.43386 2.70756 22 - -
8919 1.38629 1.38629 1.38629 1.38629
8920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8921 23 2.53331 3.02441 0.20344 2.88069 23 - -
8922 1.38629 1.38629 1.38629 1.38629
8923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8924 24 2.81865 0.23582 2.88868 2.35662 24 - -
8925 1.38629 1.38629 1.38629 1.38629
8926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8927 25 0.23862 2.84929 2.43386 2.70756 25 - -
8928 1.38629 1.38629 1.38629 1.38629
8929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8930 26 2.57915 2.25909 2.64442 0.28946 26 - -
8931 1.38629 1.38629 1.38629 1.38629
8932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8933 27 2.53331 3.02441 0.20344 2.88069 27 - -
8934 1.38629 1.38629 1.38629 1.38629
8935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8936 28 2.81865 0.23582 2.88868 2.35662 28 - -
8937 1.38629 1.38629 1.38629 1.38629
8938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8939 29 2.81865 0.23582 2.88868 2.35662 29 - -
8940 1.38629 1.38629 1.38629 1.38629
8941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8942 30 2.57915 2.25909 2.64442 0.28946 30 - -
8943 1.38629 1.38629 1.38629 1.38629
8944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8945 31 2.53331 3.02441 0.20344 2.88069 31 - -
8946 1.38629 1.38629 1.38629 1.38629
8947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8948 32 2.57915 2.25909 2.64442 0.28946 32 - -
8949 1.38629 1.38629 1.38629 1.38629
8950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8951 33 2.81865 0.23582 2.88868 2.35662 33 - -
8952 1.38629 1.38629 1.38629 1.38629
8953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8954 34 2.57915 2.25909 2.64442 0.28946 34 - -
8955 1.38629 1.38629 1.38629 1.38629
8956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8957 35 2.53331 3.02441 0.20344 2.88069 35 - -
8958 1.38629 1.38629 1.38629 1.38629
8959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8960 36 0.23862 2.84929 2.43386 2.70756 36 - -
8961 1.38629 1.38629 1.38629 1.38629
8962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8963 37 2.53331 3.02441 0.20344 2.88069 37 - -
8964 1.38629 1.38629 1.38629 1.38629
8965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8966 38 2.81865 0.23582 2.88868 2.35662 38 - -
8967 1.38629 1.38629 1.38629 1.38629
8968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8969 39 2.53331 3.02441 0.20344 2.88069 39 - -
8970 1.38629 1.38629 1.38629 1.38629
8971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8972 40 2.57915 2.25909 2.64442 0.28946 40 - -
8973 1.38629 1.38629 1.38629 1.38629
8974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8975 41 2.81865 0.23582 2.88868 2.35662 41 - -
8976 1.38629 1.38629 1.38629 1.38629
8977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8978 42 2.53331 3.02441 0.20344 2.88069 42 - -
8979 1.38629 1.38629 1.38629 1.38629
8980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8981 43 2.57915 2.25909 2.64442 0.28946 43 - -
8982 1.38629 1.38629 1.38629 1.38629
8983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8984 44 2.57915 2.25909 2.64442 0.28946 44 - -
8985 1.38629 1.38629 1.38629 1.38629
8986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8987 45 2.57915 2.25909 2.64442 0.28946 45 - -
8988 1.38629 1.38629 1.38629 1.38629
8989 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
8990 //
8991 HMMER3/b [3.0 | March 2010]
8992 NAME 3_End_Metazoa_58S_end_fortythreel_long
8993 LENG 45
8994 ALPH DNA
8995 RF no
8996 CS no
8997 MAP yes
8998 DATE Sat Feb 25 14:49:11 2012
8999 NSEQ 4
9000 EFFN 3.222656
9001 CKSUM 386890201
9002 STATS LOCAL MSV -8.1714 0.71933
9003 STATS LOCAL VITERBI -7.7255 0.71933
9004 STATS LOCAL FORWARD -4.3341 0.71933
9005 HMM A C G T
9006 m->m m->i m->d i->m i->i d->m d->d
9007 COMPO 1.82367 1.31887 1.19880 1.31091
9008 1.38629 1.38629 1.38629 1.38629
9009 0.03758 3.99317 3.99317 1.46634 0.26236 0.00000 *
9010 1 2.92468 3.55461 0.12085 3.45586 1 - -
9011 1.38629 1.38629 1.38629 1.38629
9012 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9013 2 3.39555 0.13478 3.44658 2.80157 2 - -
9014 1.38629 1.38629 1.38629 1.38629
9015 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9016 3 2.92468 3.55461 0.12085 3.45586 3 - -
9017 1.38629 1.38629 1.38629 1.38629
9018 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9019 4 3.39555 0.13478 3.44658 2.80157 4 - -
9020 1.38629 1.38629 1.38629 1.38629
9021 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9022 5 3.05586 2.57429 3.10526 0.18405 5 - -
9023 1.38629 1.38629 1.38629 1.38629
9024 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9025 6 3.39555 0.13478 3.44658 2.80157 6 - -
9026 1.38629 1.38629 1.38629 1.38629
9027 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9028 7 3.39555 0.13478 3.44658 2.80157 7 - -
9029 1.38629 1.38629 1.38629 1.38629
9030 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9031 8 3.05586 2.57429 3.10526 0.18405 8 - -
9032 1.38629 1.38629 1.38629 1.38629
9033 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9034 9 3.05586 2.57429 3.10526 0.18405 9 - -
9035 1.38629 1.38629 1.38629 1.38629
9036 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9037 10 2.92468 3.55461 0.12085 3.45586 10 - -
9038 1.38629 1.38629 1.38629 1.38629
9039 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9040 11 2.92468 3.55461 0.12085 3.45586 11 - -
9041 1.38629 1.38629 1.38629 1.38629
9042 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9043 12 3.39555 0.13478 3.44658 2.80157 12 - -
9044 1.38629 1.38629 1.38629 1.38629
9045 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9046 13 3.05586 2.57429 3.10526 0.18405 13 - -
9047 1.38629 1.38629 1.38629 1.38629
9048 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9049 14 3.39555 0.13478 3.44658 2.80157 14 - -
9050 1.38629 1.38629 1.38629 1.38629
9051 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9052 15 3.05586 2.57429 3.10526 0.18405 15 - -
9053 1.38629 1.38629 1.38629 1.38629
9054 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9055 16 3.39555 0.13478 3.44658 2.80157 16 - -
9056 1.38629 1.38629 1.38629 1.38629
9057 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9058 17 3.39555 0.13478 3.44658 2.80157 17 - -
9059 1.38629 1.38629 1.38629 1.38629
9060 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9061 18 0.14627 3.34770 2.78072 3.24630 18 - -
9062 1.38629 1.38629 1.38629 1.38629
9063 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9064 19 0.14627 3.34770 2.78072 3.24630 19 - -
9065 1.38629 1.38629 1.38629 1.38629
9066 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9067 20 2.92468 3.55461 0.12085 3.45586 20 - -
9068 1.38629 1.38629 1.38629 1.38629
9069 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9070 21 2.92468 3.55461 0.12085 3.45586 21 - -
9071 1.38629 1.38629 1.38629 1.38629
9072 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9073 22 0.14627 3.34770 2.78072 3.24630 22 - -
9074 1.38629 1.38629 1.38629 1.38629
9075 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9076 23 2.92468 3.55461 0.12085 3.45586 23 - -
9077 1.38629 1.38629 1.38629 1.38629
9078 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9079 24 3.39555 0.13478 3.44658 2.80157 24 - -
9080 1.38629 1.38629 1.38629 1.38629
9081 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9082 25 0.14627 3.34770 2.78072 3.24630 25 - -
9083 1.38629 1.38629 1.38629 1.38629
9084 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9085 26 3.05586 2.57429 3.10526 0.18405 26 - -
9086 1.38629 1.38629 1.38629 1.38629
9087 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9088 27 2.92468 3.55461 0.12085 3.45586 27 - -
9089 1.38629 1.38629 1.38629 1.38629
9090 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9091 28 3.05586 2.57429 3.10526 0.18405 28 - -
9092 1.38629 1.38629 1.38629 1.38629
9093 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9094 29 3.39555 0.13478 3.44658 2.80157 29 - -
9095 1.38629 1.38629 1.38629 1.38629
9096 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9097 30 3.05586 2.57429 3.10526 0.18405 30 - -
9098 1.38629 1.38629 1.38629 1.38629
9099 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9100 31 2.92468 3.55461 0.12085 3.45586 31 - -
9101 1.38629 1.38629 1.38629 1.38629
9102 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9103 32 3.05586 2.57429 3.10526 0.18405 32 - -
9104 1.38629 1.38629 1.38629 1.38629
9105 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9106 33 3.39555 0.13478 3.44658 2.80157 33 - -
9107 1.38629 1.38629 1.38629 1.38629
9108 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9109 34 3.05586 2.57429 3.10526 0.18405 34 - -
9110 1.38629 1.38629 1.38629 1.38629
9111 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9112 35 2.92468 3.55461 0.12085 3.45586 35 - -
9113 1.38629 1.38629 1.38629 1.38629
9114 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9115 36 0.14627 3.34770 2.78072 3.24630 36 - -
9116 1.38629 1.38629 1.38629 1.38629
9117 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9118 37 2.92468 3.55461 0.12085 3.45586 37 - -
9119 1.38629 1.38629 1.38629 1.38629
9120 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9121 38 2.92468 3.55461 0.12085 3.45586 38 - -
9122 1.38629 1.38629 1.38629 1.38629
9123 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9124 39 2.92468 3.55461 0.12085 3.45586 39 - -
9125 1.38629 1.38629 1.38629 1.38629
9126 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9127 40 3.05586 2.57429 3.10526 0.18405 40 - -
9128 1.38629 1.38629 1.38629 1.38629
9129 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9130 41 3.39555 0.13478 3.44658 2.80157 41 - -
9131 1.38629 1.38629 1.38629 1.38629
9132 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9133 42 2.92468 3.55461 0.12085 3.45586 42 - -
9134 1.38629 1.38629 1.38629 1.38629
9135 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9136 43 0.14627 3.34770 2.78072 3.24630 43 - -
9137 1.38629 1.38629 1.38629 1.38629
9138 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9139 44 3.05586 2.57429 3.10526 0.18405 44 - -
9140 1.38629 1.38629 1.38629 1.38629
9141 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
9142 45 3.05586 2.57429 3.10526 0.18405 45 - -
9143 1.38629 1.38629 1.38629 1.38629
9144 0.01897 3.97456 * 1.46634 0.26236 0.00000 *
9145 //
9146 HMMER3/b [3.0 | March 2010]
9147 NAME 3_End_Metazoa_58S_end_fortythreem_long
9148 LENG 45
9149 ALPH DNA
9150 RF no
9151 CS no
9152 MAP yes
9153 DATE Sat Feb 25 14:49:16 2012
9154 NSEQ 3
9155 EFFN 3.000000
9156 CKSUM 603423961
9157 STATS LOCAL MSV -7.9589 0.72027
9158 STATS LOCAL VITERBI -7.8724 0.72027
9159 STATS LOCAL FORWARD -3.7891 0.72027
9160 HMM A C G T
9161 m->m m->i m->d i->m i->i d->m d->d
9162 COMPO 1.91615 1.38333 1.14591 1.25825
9163 1.38629 1.38629 1.38629 1.38629
9164 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
9165 1 2.86982 3.47591 0.13017 3.36931 1 - -
9166 1.38629 1.38629 1.38629 1.38629
9167 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9168 2 3.30705 0.14631 3.36166 2.73626 2 - -
9169 1.38629 1.38629 1.38629 1.38629
9170 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9171 3 2.86982 3.47591 0.13017 3.36931 3 - -
9172 1.38629 1.38629 1.38629 1.38629
9173 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9174 4 3.30705 0.14631 3.36166 2.73626 4 - -
9175 1.38629 1.38629 1.38629 1.38629
9176 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9177 5 2.97980 2.52563 3.03204 0.19727 5 - -
9178 1.38629 1.38629 1.38629 1.38629
9179 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9180 6 3.30705 0.14631 3.36166 2.73626 6 - -
9181 1.38629 1.38629 1.38629 1.38629
9182 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9183 7 2.97980 2.52563 3.03204 0.19727 7 - -
9184 1.38629 1.38629 1.38629 1.38629
9185 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9186 8 2.97980 2.52563 3.03204 0.19727 8 - -
9187 1.38629 1.38629 1.38629 1.38629
9188 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9189 9 2.86982 3.47591 0.13017 3.36931 9 - -
9190 1.38629 1.38629 1.38629 1.38629
9191 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9192 10 2.86982 3.47591 0.13017 3.36931 10 - -
9193 1.38629 1.38629 1.38629 1.38629
9194 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9195 11 2.86982 3.47591 0.13017 3.36931 11 - -
9196 1.38629 1.38629 1.38629 1.38629
9197 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9198 12 2.97980 2.52563 3.03204 0.19727 12 - -
9199 1.38629 1.38629 1.38629 1.38629
9200 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9201 13 2.97980 2.52563 3.03204 0.19727 13 - -
9202 1.38629 1.38629 1.38629 1.38629
9203 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9204 14 3.30705 0.14631 3.36166 2.73626 14 - -
9205 1.38629 1.38629 1.38629 1.38629
9206 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9207 15 2.97980 2.52563 3.03204 0.19727 15 - -
9208 1.38629 1.38629 1.38629 1.38629
9209 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9210 16 3.30705 0.14631 3.36166 2.73626 16 - -
9211 1.38629 1.38629 1.38629 1.38629
9212 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9213 17 3.30705 0.14631 3.36166 2.73626 17 - -
9214 1.38629 1.38629 1.38629 1.38629
9215 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9216 18 3.30705 0.14631 3.36166 2.73626 18 - -
9217 1.38629 1.38629 1.38629 1.38629
9218 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9219 19 0.15719 3.27118 2.73043 3.16274 19 - -
9220 1.38629 1.38629 1.38629 1.38629
9221 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9222 20 2.86982 3.47591 0.13017 3.36931 20 - -
9223 1.38629 1.38629 1.38629 1.38629
9224 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9225 21 2.86982 3.47591 0.13017 3.36931 21 - -
9226 1.38629 1.38629 1.38629 1.38629
9227 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9228 22 0.15719 3.27118 2.73043 3.16274 22 - -
9229 1.38629 1.38629 1.38629 1.38629
9230 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9231 23 2.86982 3.47591 0.13017 3.36931 23 - -
9232 1.38629 1.38629 1.38629 1.38629
9233 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9234 24 3.30705 0.14631 3.36166 2.73626 24 - -
9235 1.38629 1.38629 1.38629 1.38629
9236 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9237 25 0.15719 3.27118 2.73043 3.16274 25 - -
9238 1.38629 1.38629 1.38629 1.38629
9239 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9240 26 2.97980 2.52563 3.03204 0.19727 26 - -
9241 1.38629 1.38629 1.38629 1.38629
9242 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9243 27 2.86982 3.47591 0.13017 3.36931 27 - -
9244 1.38629 1.38629 1.38629 1.38629
9245 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9246 28 2.97980 2.52563 3.03204 0.19727 28 - -
9247 1.38629 1.38629 1.38629 1.38629
9248 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9249 29 3.30705 0.14631 3.36166 2.73626 29 - -
9250 1.38629 1.38629 1.38629 1.38629
9251 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9252 30 2.97980 2.52563 3.03204 0.19727 30 - -
9253 1.38629 1.38629 1.38629 1.38629
9254 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9255 31 2.86982 3.47591 0.13017 3.36931 31 - -
9256 1.38629 1.38629 1.38629 1.38629
9257 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9258 32 2.97980 2.52563 3.03204 0.19727 32 - -
9259 1.38629 1.38629 1.38629 1.38629
9260 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9261 33 3.30705 0.14631 3.36166 2.73626 33 - -
9262 1.38629 1.38629 1.38629 1.38629
9263 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9264 34 2.97980 2.52563 3.03204 0.19727 34 - -
9265 1.38629 1.38629 1.38629 1.38629
9266 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9267 35 2.86982 3.47591 0.13017 3.36931 35 - -
9268 1.38629 1.38629 1.38629 1.38629
9269 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9270 36 0.15719 3.27118 2.73043 3.16274 36 - -
9271 1.38629 1.38629 1.38629 1.38629
9272 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9273 37 2.86982 3.47591 0.13017 3.36931 37 - -
9274 1.38629 1.38629 1.38629 1.38629
9275 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9276 38 2.97980 2.52563 3.03204 0.19727 38 - -
9277 1.38629 1.38629 1.38629 1.38629
9278 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9279 39 2.86982 3.47591 0.13017 3.36931 39 - -
9280 1.38629 1.38629 1.38629 1.38629
9281 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9282 40 2.97980 2.52563 3.03204 0.19727 40 - -
9283 1.38629 1.38629 1.38629 1.38629
9284 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9285 41 3.30705 0.14631 3.36166 2.73626 41 - -
9286 1.38629 1.38629 1.38629 1.38629
9287 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9288 42 2.86982 3.47591 0.13017 3.36931 42 - -
9289 1.38629 1.38629 1.38629 1.38629
9290 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9291 43 2.86982 3.47591 0.13017 3.36931 43 - -
9292 1.38629 1.38629 1.38629 1.38629
9293 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9294 44 0.15719 3.27118 2.73043 3.16274 44 - -
9295 1.38629 1.38629 1.38629 1.38629
9296 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
9297 45 2.97980 2.52563 3.03204 0.19727 45 - -
9298 1.38629 1.38629 1.38629 1.38629
9299 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
9300 //
9301 HMMER3/b [3.0 | March 2010]
9302 NAME 3_End_Metazoa_58S_end_fortytwo_long
9303 LENG 45
9304 ALPH DNA
9305 RF no
9306 CS no
9307 MAP yes
9308 DATE Sat Feb 25 14:47:52 2012
9309 NSEQ 2
9310 EFFN 2.000000
9311 CKSUM 1347837329
9312 STATS LOCAL MSV -7.4541 0.72721
9313 STATS LOCAL VITERBI -8.2939 0.72721
9314 STATS LOCAL FORWARD -3.3636 0.72721
9315 HMM A C G T
9316 m->m m->i m->d i->m i->i d->m d->d
9317 COMPO 1.92452 1.19705 1.08122 1.54745
9318 1.38629 1.38629 1.38629 1.38629
9319 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
9320 1 2.57915 2.25909 2.64442 0.28946 1 - -
9321 1.38629 1.38629 1.38629 1.38629
9322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9323 2 2.81865 0.23582 2.88868 2.35662 2 - -
9324 1.38629 1.38629 1.38629 1.38629
9325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9326 3 2.53331 3.02441 0.20344 2.88069 3 - -
9327 1.38629 1.38629 1.38629 1.38629
9328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9329 4 2.53331 3.02441 0.20344 2.88069 4 - -
9330 1.38629 1.38629 1.38629 1.38629
9331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9332 5 2.57915 2.25909 2.64442 0.28946 5 - -
9333 1.38629 1.38629 1.38629 1.38629
9334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9335 6 2.53331 3.02441 0.20344 2.88069 6 - -
9336 1.38629 1.38629 1.38629 1.38629
9337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9338 7 0.23862 2.84929 2.43386 2.70756 7 - -
9339 1.38629 1.38629 1.38629 1.38629
9340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9341 8 2.81865 0.23582 2.88868 2.35662 8 - -
9342 1.38629 1.38629 1.38629 1.38629
9343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9344 9 2.81865 0.23582 2.88868 2.35662 9 - -
9345 1.38629 1.38629 1.38629 1.38629
9346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9347 10 2.81865 0.23582 2.88868 2.35662 10 - -
9348 1.38629 1.38629 1.38629 1.38629
9349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9350 11 2.53331 3.02441 0.20344 2.88069 11 - -
9351 1.38629 1.38629 1.38629 1.38629
9352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9353 12 2.81865 0.23582 2.88868 2.35662 12 - -
9354 1.38629 1.38629 1.38629 1.38629
9355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9356 13 2.53331 3.02441 0.20344 2.88069 13 - -
9357 1.38629 1.38629 1.38629 1.38629
9358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9359 14 2.53331 3.02441 0.20344 2.88069 14 - -
9360 1.38629 1.38629 1.38629 1.38629
9361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9362 15 2.53331 3.02441 0.20344 2.88069 15 - -
9363 1.38629 1.38629 1.38629 1.38629
9364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9365 16 2.57915 2.25909 2.64442 0.28946 16 - -
9366 1.38629 1.38629 1.38629 1.38629
9367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9368 17 2.81865 0.23582 2.88868 2.35662 17 - -
9369 1.38629 1.38629 1.38629 1.38629
9370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9371 18 2.81865 0.23582 2.88868 2.35662 18 - -
9372 1.38629 1.38629 1.38629 1.38629
9373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9374 19 2.81865 0.23582 2.88868 2.35662 19 - -
9375 1.38629 1.38629 1.38629 1.38629
9376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9377 20 2.53331 3.02441 0.20344 2.88069 20 - -
9378 1.38629 1.38629 1.38629 1.38629
9379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9380 21 2.53331 3.02441 0.20344 2.88069 21 - -
9381 1.38629 1.38629 1.38629 1.38629
9382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9383 22 2.53331 3.02441 0.20344 2.88069 22 - -
9384 1.38629 1.38629 1.38629 1.38629
9385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9386 23 2.81865 0.23582 2.88868 2.35662 23 - -
9387 1.38629 1.38629 1.38629 1.38629
9388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9389 24 2.81865 0.23582 2.88868 2.35662 24 - -
9390 1.38629 1.38629 1.38629 1.38629
9391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9392 25 0.23862 2.84929 2.43386 2.70756 25 - -
9393 1.38629 1.38629 1.38629 1.38629
9394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9395 26 2.81865 0.23582 2.88868 2.35662 26 - -
9396 1.38629 1.38629 1.38629 1.38629
9397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9398 27 2.53331 3.02441 0.20344 2.88069 27 - -
9399 1.38629 1.38629 1.38629 1.38629
9400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9401 28 2.81865 0.23582 2.88868 2.35662 28 - -
9402 1.38629 1.38629 1.38629 1.38629
9403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9404 29 2.81865 0.23582 2.88868 2.35662 29 - -
9405 1.38629 1.38629 1.38629 1.38629
9406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9407 30 2.57915 2.25909 2.64442 0.28946 30 - -
9408 1.38629 1.38629 1.38629 1.38629
9409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9410 31 2.53331 3.02441 0.20344 2.88069 31 - -
9411 1.38629 1.38629 1.38629 1.38629
9412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9413 32 2.57915 2.25909 2.64442 0.28946 32 - -
9414 1.38629 1.38629 1.38629 1.38629
9415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9416 33 2.81865 0.23582 2.88868 2.35662 33 - -
9417 1.38629 1.38629 1.38629 1.38629
9418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9419 34 2.57915 2.25909 2.64442 0.28946 34 - -
9420 1.38629 1.38629 1.38629 1.38629
9421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9422 35 2.53331 3.02441 0.20344 2.88069 35 - -
9423 1.38629 1.38629 1.38629 1.38629
9424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9425 36 0.23862 2.84929 2.43386 2.70756 36 - -
9426 1.38629 1.38629 1.38629 1.38629
9427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9428 37 2.53331 3.02441 0.20344 2.88069 37 - -
9429 1.38629 1.38629 1.38629 1.38629
9430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9431 38 2.53331 3.02441 0.20344 2.88069 38 - -
9432 1.38629 1.38629 1.38629 1.38629
9433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9434 39 2.53331 3.02441 0.20344 2.88069 39 - -
9435 1.38629 1.38629 1.38629 1.38629
9436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9437 40 2.57915 2.25909 2.64442 0.28946 40 - -
9438 1.38629 1.38629 1.38629 1.38629
9439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9440 41 2.81865 0.23582 2.88868 2.35662 41 - -
9441 1.38629 1.38629 1.38629 1.38629
9442 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9443 42 2.53331 3.02441 0.20344 2.88069 42 - -
9444 1.38629 1.38629 1.38629 1.38629
9445 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9446 43 2.57915 2.25909 2.64442 0.28946 43 - -
9447 1.38629 1.38629 1.38629 1.38629
9448 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9449 44 0.23862 2.84929 2.43386 2.70756 44 - -
9450 1.38629 1.38629 1.38629 1.38629
9451 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9452 45 2.57915 2.25909 2.64442 0.28946 45 - -
9453 1.38629 1.38629 1.38629 1.38629
9454 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
9455 //
9456 HMMER3/b [3.0 | March 2010]
9457 NAME 3_End_Metazoa_58S_end_foura_long
9458 LENG 45
9459 ALPH DNA
9460 RF no
9461 CS no
9462 MAP yes
9463 DATE Sat Feb 25 14:32:20 2012
9464 NSEQ 4
9465 EFFN 3.214844
9466 CKSUM 836289414
9467 STATS LOCAL MSV -7.9825 0.71932
9468 STATS LOCAL VITERBI -7.8216 0.71932
9469 STATS LOCAL FORWARD -4.1059 0.71932
9470 HMM A C G T
9471 m->m m->i m->d i->m i->i d->m d->d
9472 COMPO 1.63264 1.38880 1.19625 1.37482
9473 1.38629 1.38629 1.38629 1.38629
9474 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 *
9475 1 2.92285 3.55196 0.12115 3.45295 1 - -
9476 1.38629 1.38629 1.38629 1.38629
9477 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9478 2 3.39256 0.13515 3.44371 2.79938 2 - -
9479 1.38629 1.38629 1.38629 1.38629
9480 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9481 3 3.39256 0.13515 3.44371 2.79938 3 - -
9482 1.38629 1.38629 1.38629 1.38629
9483 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9484 4 0.14663 3.34511 2.77903 3.24347 4 - -
9485 1.38629 1.38629 1.38629 1.38629
9486 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9487 5 3.05326 2.57263 3.10276 0.18448 5 - -
9488 1.38629 1.38629 1.38629 1.38629
9489 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9490 6 3.05326 2.57263 3.10276 0.18448 6 - -
9491 1.38629 1.38629 1.38629 1.38629
9492 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9493 7 2.92285 3.55196 0.12115 3.45295 7 - -
9494 1.38629 1.38629 1.38629 1.38629
9495 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9496 8 2.92285 3.55196 0.12115 3.45295 8 - -
9497 1.38629 1.38629 1.38629 1.38629
9498 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9499 9 0.14663 3.34511 2.77903 3.24347 9 - -
9500 1.38629 1.38629 1.38629 1.38629
9501 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9502 10 2.92285 3.55196 0.12115 3.45295 10 - -
9503 1.38629 1.38629 1.38629 1.38629
9504 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9505 11 3.05326 2.57263 3.10276 0.18448 11 - -
9506 1.38629 1.38629 1.38629 1.38629
9507 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9508 12 2.92285 3.55196 0.12115 3.45295 12 - -
9509 1.38629 1.38629 1.38629 1.38629
9510 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9511 13 0.14663 3.34511 2.77903 3.24347 13 - -
9512 1.38629 1.38629 1.38629 1.38629
9513 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9514 14 3.39256 0.13515 3.44371 2.79938 14 - -
9515 1.38629 1.38629 1.38629 1.38629
9516 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9517 15 0.14663 3.34511 2.77903 3.24347 15 - -
9518 1.38629 1.38629 1.38629 1.38629
9519 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9520 16 3.05326 2.57263 3.10276 0.18448 16 - -
9521 1.38629 1.38629 1.38629 1.38629
9522 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9523 17 3.39256 0.13515 3.44371 2.79938 17 - -
9524 1.38629 1.38629 1.38629 1.38629
9525 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9526 18 3.39256 0.13515 3.44371 2.79938 18 - -
9527 1.38629 1.38629 1.38629 1.38629
9528 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9529 19 3.05326 2.57263 3.10276 0.18448 19 - -
9530 1.38629 1.38629 1.38629 1.38629
9531 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9532 20 3.05326 2.57263 3.10276 0.18448 20 - -
9533 1.38629 1.38629 1.38629 1.38629
9534 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9535 21 3.05326 2.57263 3.10276 0.18448 21 - -
9536 1.38629 1.38629 1.38629 1.38629
9537 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9538 22 2.92285 3.55196 0.12115 3.45295 22 - -
9539 1.38629 1.38629 1.38629 1.38629
9540 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9541 23 2.92285 3.55196 0.12115 3.45295 23 - -
9542 1.38629 1.38629 1.38629 1.38629
9543 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9544 24 3.39256 0.13515 3.44371 2.79938 24 - -
9545 1.38629 1.38629 1.38629 1.38629
9546 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9547 25 0.14663 3.34511 2.77903 3.24347 25 - -
9548 1.38629 1.38629 1.38629 1.38629
9549 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9550 26 3.39256 0.13515 3.44371 2.79938 26 - -
9551 1.38629 1.38629 1.38629 1.38629
9552 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9553 27 2.92285 3.55196 0.12115 3.45295 27 - -
9554 1.38629 1.38629 1.38629 1.38629
9555 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9556 28 3.39256 0.13515 3.44371 2.79938 28 - -
9557 1.38629 1.38629 1.38629 1.38629
9558 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9559 29 3.39256 0.13515 3.44371 2.79938 29 - -
9560 1.38629 1.38629 1.38629 1.38629
9561 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9562 30 3.05326 2.57263 3.10276 0.18448 30 - -
9563 1.38629 1.38629 1.38629 1.38629
9564 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9565 31 2.92285 3.55196 0.12115 3.45295 31 - -
9566 1.38629 1.38629 1.38629 1.38629
9567 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9568 32 2.92285 3.55196 0.12115 3.45295 32 - -
9569 1.38629 1.38629 1.38629 1.38629
9570 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9571 33 3.05326 2.57263 3.10276 0.18448 33 - -
9572 1.38629 1.38629 1.38629 1.38629
9573 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9574 34 3.05326 2.57263 3.10276 0.18448 34 - -
9575 1.38629 1.38629 1.38629 1.38629
9576 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9577 35 3.39256 0.13515 3.44371 2.79938 35 - -
9578 1.38629 1.38629 1.38629 1.38629
9579 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9580 36 0.14663 3.34511 2.77903 3.24347 36 - -
9581 1.38629 1.38629 1.38629 1.38629
9582 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9583 37 2.92285 3.55196 0.12115 3.45295 37 - -
9584 1.38629 1.38629 1.38629 1.38629
9585 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9586 38 2.92285 3.55196 0.12115 3.45295 38 - -
9587 1.38629 1.38629 1.38629 1.38629
9588 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9589 39 2.92285 3.55196 0.12115 3.45295 39 - -
9590 1.38629 1.38629 1.38629 1.38629
9591 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9592 40 3.05326 2.57263 3.10276 0.18448 40 - -
9593 1.38629 1.38629 1.38629 1.38629
9594 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9595 41 3.39256 0.13515 3.44371 2.79938 41 - -
9596 1.38629 1.38629 1.38629 1.38629
9597 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9598 42 2.92285 3.55196 0.12115 3.45295 42 - -
9599 1.38629 1.38629 1.38629 1.38629
9600 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9601 43 3.05326 2.57263 3.10276 0.18448 43 - -
9602 1.38629 1.38629 1.38629 1.38629
9603 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9604 44 0.14663 3.34511 2.77903 3.24347 44 - -
9605 1.38629 1.38629 1.38629 1.38629
9606 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
9607 45 0.14663 3.34511 2.77903 3.24347 45 - -
9608 1.38629 1.38629 1.38629 1.38629
9609 0.01899 3.97309 * 1.46634 0.26236 0.00000 *
9610 //
9611 HMMER3/b [3.0 | March 2010]
9612 NAME 3_End_Metazoa_58S_end_fourb_long
9613 LENG 45
9614 ALPH DNA
9615 RF no
9616 CS no
9617 MAP yes
9618 DATE Sat Feb 25 14:32:26 2012
9619 NSEQ 7
9620 EFFN 3.599121
9621 CKSUM 4220224434
9622 STATS LOCAL MSV -7.4100 0.71932
9623 STATS LOCAL VITERBI -7.8550 0.71932
9624 STATS LOCAL FORWARD -4.0872 0.71932
9625 HMM A C G T
9626 m->m m->i m->d i->m i->i d->m d->d
9627 COMPO 1.57621 1.40156 1.22724 1.37070
9628 1.38629 1.38629 1.38629 1.38629
9629 0.03510 4.06029 4.06029 1.46634 0.26236 0.00000 *
9630 1 3.00563 3.67283 0.10826 3.58650 1 - -
9631 1.38629 1.38629 1.38629 1.38629
9632 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9633 2 3.53025 0.11920 3.57549 2.89920 2 - -
9634 1.38629 1.38629 1.38629 1.38629
9635 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9636 3 3.53025 0.11920 3.57549 2.89920 3 - -
9637 1.38629 1.38629 1.38629 1.38629
9638 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9639 4 0.13122 3.46482 2.85658 3.37461 4 - -
9640 1.38629 1.38629 1.38629 1.38629
9641 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9642 5 3.17479 2.64985 3.21962 0.16539 5 - -
9643 1.38629 1.38629 1.38629 1.38629
9644 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9645 6 3.17479 2.64985 3.21962 0.16539 6 - -
9646 1.38629 1.38629 1.38629 1.38629
9647 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9648 7 3.00563 3.67283 0.10826 3.58650 7 - -
9649 1.38629 1.38629 1.38629 1.38629
9650 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9651 8 3.00563 3.67283 0.10826 3.58650 8 - -
9652 1.38629 1.38629 1.38629 1.38629
9653 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9654 9 0.13122 3.46482 2.85658 3.37461 9 - -
9655 1.38629 1.38629 1.38629 1.38629
9656 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9657 10 3.00563 3.67283 0.10826 3.58650 10 - -
9658 1.38629 1.38629 1.38629 1.38629
9659 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9660 11 3.17479 2.64985 3.21962 0.16539 11 - -
9661 1.38629 1.38629 1.38629 1.38629
9662 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9663 12 2.15344 2.17550 1.15822 0.78456 12 - -
9664 1.38629 1.38629 1.38629 1.38629
9665 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9666 13 0.13122 3.46482 2.85658 3.37461 13 - -
9667 1.38629 1.38629 1.38629 1.38629
9668 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9669 14 2.63062 0.48844 2.70064 1.39746 14 - -
9670 1.38629 1.38629 1.38629 1.38629
9671 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9672 15 0.13122 3.46482 2.85658 3.37461 15 - -
9673 1.38629 1.38629 1.38629 1.38629
9674 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9675 16 3.17479 2.64985 3.21962 0.16539 16 - -
9676 1.38629 1.38629 1.38629 1.38629
9677 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9678 17 3.53025 0.11920 3.57549 2.89920 17 - -
9679 1.38629 1.38629 1.38629 1.38629
9680 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9681 18 3.53025 0.11920 3.57549 2.89920 18 - -
9682 1.38629 1.38629 1.38629 1.38629
9683 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9684 19 0.13122 3.46482 2.85658 3.37461 19 - -
9685 1.38629 1.38629 1.38629 1.38629
9686 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9687 20 3.17479 2.64985 3.21962 0.16539 20 - -
9688 1.38629 1.38629 1.38629 1.38629
9689 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9690 21 3.17479 2.64985 3.21962 0.16539 21 - -
9691 1.38629 1.38629 1.38629 1.38629
9692 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9693 22 3.00563 3.67283 0.10826 3.58650 22 - -
9694 1.38629 1.38629 1.38629 1.38629
9695 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9696 23 3.00563 3.67283 0.10826 3.58650 23 - -
9697 1.38629 1.38629 1.38629 1.38629
9698 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9699 24 3.53025 0.11920 3.57549 2.89920 24 - -
9700 1.38629 1.38629 1.38629 1.38629
9701 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9702 25 0.13122 3.46482 2.85658 3.37461 25 - -
9703 1.38629 1.38629 1.38629 1.38629
9704 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9705 26 3.53025 0.11920 3.57549 2.89920 26 - -
9706 1.38629 1.38629 1.38629 1.38629
9707 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9708 27 3.00563 3.67283 0.10826 3.58650 27 - -
9709 1.38629 1.38629 1.38629 1.38629
9710 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9711 28 3.53025 0.11920 3.57549 2.89920 28 - -
9712 1.38629 1.38629 1.38629 1.38629
9713 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9714 29 3.53025 0.11920 3.57549 2.89920 29 - -
9715 1.38629 1.38629 1.38629 1.38629
9716 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9717 30 3.17479 2.64985 3.21962 0.16539 30 - -
9718 1.38629 1.38629 1.38629 1.38629
9719 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9720 31 3.00563 3.67283 0.10826 3.58650 31 - -
9721 1.38629 1.38629 1.38629 1.38629
9722 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9723 32 3.00563 3.67283 0.10826 3.58650 32 - -
9724 1.38629 1.38629 1.38629 1.38629
9725 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9726 33 3.17479 2.64985 3.21962 0.16539 33 - -
9727 1.38629 1.38629 1.38629 1.38629
9728 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9729 34 3.17479 2.64985 3.21962 0.16539 34 - -
9730 1.38629 1.38629 1.38629 1.38629
9731 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9732 35 3.53025 0.11920 3.57549 2.89920 35 - -
9733 1.38629 1.38629 1.38629 1.38629
9734 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9735 36 0.13122 3.46482 2.85658 3.37461 36 - -
9736 1.38629 1.38629 1.38629 1.38629
9737 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9738 37 3.00563 3.67283 0.10826 3.58650 37 - -
9739 1.38629 1.38629 1.38629 1.38629
9740 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9741 38 3.00563 3.67283 0.10826 3.58650 38 - -
9742 1.38629 1.38629 1.38629 1.38629
9743 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9744 39 3.00563 3.67283 0.10826 3.58650 39 - -
9745 1.38629 1.38629 1.38629 1.38629
9746 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9747 40 3.17479 2.64985 3.21962 0.16539 40 - -
9748 1.38629 1.38629 1.38629 1.38629
9749 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9750 41 3.53025 0.11920 3.57549 2.89920 41 - -
9751 1.38629 1.38629 1.38629 1.38629
9752 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9753 42 3.00563 3.67283 0.10826 3.58650 42 - -
9754 1.38629 1.38629 1.38629 1.38629
9755 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9756 43 3.17479 2.64985 3.21962 0.16539 43 - -
9757 1.38629 1.38629 1.38629 1.38629
9758 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9759 44 0.57751 2.35639 2.27395 1.42279 44 - -
9760 1.38629 1.38629 1.38629 1.38629
9761 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547
9762 45 0.13122 3.46482 2.85658 3.37461 45 - -
9763 1.38629 1.38629 1.38629 1.38629
9764 0.01770 4.04290 * 1.46634 0.26236 0.00000 *
9765 //
9766 HMMER3/b [3.0 | March 2010]
9767 NAME 3_End_Metazoa_58S_end_fourc_long
9768 LENG 45
9769 ALPH DNA
9770 RF no
9771 CS no
9772 MAP yes
9773 DATE Sat Feb 25 14:32:33 2012
9774 NSEQ 2
9775 EFFN 2.000000
9776 CKSUM 40021466
9777 STATS LOCAL MSV -7.4793 0.72812
9778 STATS LOCAL VITERBI -8.4338 0.72812
9779 STATS LOCAL FORWARD -3.4958 0.72812
9780 HMM A C G T
9781 m->m m->i m->d i->m i->i d->m d->d
9782 COMPO 1.66120 1.39035 1.26616 1.27587
9783 1.38629 1.38629 1.38629 1.38629
9784 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
9785 1 2.53331 3.02441 0.20344 2.88069 1 - -
9786 1.38629 1.38629 1.38629 1.38629
9787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9788 2 2.81865 0.23582 2.88868 2.35662 2 - -
9789 1.38629 1.38629 1.38629 1.38629
9790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9791 3 2.81865 0.23582 2.88868 2.35662 3 - -
9792 1.38629 1.38629 1.38629 1.38629
9793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9794 4 0.23862 2.84929 2.43386 2.70756 4 - -
9795 1.38629 1.38629 1.38629 1.38629
9796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9797 5 2.57915 2.25909 2.64442 0.28946 5 - -
9798 1.38629 1.38629 1.38629 1.38629
9799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9800 6 2.57915 2.25909 2.64442 0.28946 6 - -
9801 1.38629 1.38629 1.38629 1.38629
9802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9803 7 2.53331 3.02441 0.20344 2.88069 7 - -
9804 1.38629 1.38629 1.38629 1.38629
9805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9806 8 2.53331 3.02441 0.20344 2.88069 8 - -
9807 1.38629 1.38629 1.38629 1.38629
9808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9809 9 0.23862 2.84929 2.43386 2.70756 9 - -
9810 1.38629 1.38629 1.38629 1.38629
9811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9812 10 0.23862 2.84929 2.43386 2.70756 10 - -
9813 1.38629 1.38629 1.38629 1.38629
9814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9815 11 2.57915 2.25909 2.64442 0.28946 11 - -
9816 1.38629 1.38629 1.38629 1.38629
9817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9818 12 2.81865 0.23582 2.88868 2.35662 12 - -
9819 1.38629 1.38629 1.38629 1.38629
9820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9821 13 2.57915 2.25909 2.64442 0.28946 13 - -
9822 1.38629 1.38629 1.38629 1.38629
9823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9824 14 2.57915 2.25909 2.64442 0.28946 14 - -
9825 1.38629 1.38629 1.38629 1.38629
9826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9827 15 2.53331 3.02441 0.20344 2.88069 15 - -
9828 1.38629 1.38629 1.38629 1.38629
9829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9830 16 2.57915 2.25909 2.64442 0.28946 16 - -
9831 1.38629 1.38629 1.38629 1.38629
9832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9833 17 2.81865 0.23582 2.88868 2.35662 17 - -
9834 1.38629 1.38629 1.38629 1.38629
9835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9836 18 2.81865 0.23582 2.88868 2.35662 18 - -
9837 1.38629 1.38629 1.38629 1.38629
9838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9839 19 2.57915 2.25909 2.64442 0.28946 19 - -
9840 1.38629 1.38629 1.38629 1.38629
9841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9842 20 2.57915 2.25909 2.64442 0.28946 20 - -
9843 1.38629 1.38629 1.38629 1.38629
9844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9845 21 2.57915 2.25909 2.64442 0.28946 21 - -
9846 1.38629 1.38629 1.38629 1.38629
9847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9848 22 2.53331 3.02441 0.20344 2.88069 22 - -
9849 1.38629 1.38629 1.38629 1.38629
9850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9851 23 2.53331 3.02441 0.20344 2.88069 23 - -
9852 1.38629 1.38629 1.38629 1.38629
9853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9854 24 2.81865 0.23582 2.88868 2.35662 24 - -
9855 1.38629 1.38629 1.38629 1.38629
9856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9857 25 0.23862 2.84929 2.43386 2.70756 25 - -
9858 1.38629 1.38629 1.38629 1.38629
9859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9860 26 2.81865 0.23582 2.88868 2.35662 26 - -
9861 1.38629 1.38629 1.38629 1.38629
9862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9863 27 2.53331 3.02441 0.20344 2.88069 27 - -
9864 1.38629 1.38629 1.38629 1.38629
9865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9866 28 2.81865 0.23582 2.88868 2.35662 28 - -
9867 1.38629 1.38629 1.38629 1.38629
9868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9869 29 2.81865 0.23582 2.88868 2.35662 29 - -
9870 1.38629 1.38629 1.38629 1.38629
9871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9872 30 2.57915 2.25909 2.64442 0.28946 30 - -
9873 1.38629 1.38629 1.38629 1.38629
9874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9875 31 2.53331 3.02441 0.20344 2.88069 31 - -
9876 1.38629 1.38629 1.38629 1.38629
9877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9878 32 2.53331 3.02441 0.20344 2.88069 32 - -
9879 1.38629 1.38629 1.38629 1.38629
9880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9881 33 2.57915 2.25909 2.64442 0.28946 33 - -
9882 1.38629 1.38629 1.38629 1.38629
9883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9884 34 2.57915 2.25909 2.64442 0.28946 34 - -
9885 1.38629 1.38629 1.38629 1.38629
9886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9887 35 2.81865 0.23582 2.88868 2.35662 35 - -
9888 1.38629 1.38629 1.38629 1.38629
9889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9890 36 0.23862 2.84929 2.43386 2.70756 36 - -
9891 1.38629 1.38629 1.38629 1.38629
9892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9893 37 2.53331 3.02441 0.20344 2.88069 37 - -
9894 1.38629 1.38629 1.38629 1.38629
9895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9896 38 2.53331 3.02441 0.20344 2.88069 38 - -
9897 1.38629 1.38629 1.38629 1.38629
9898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9899 39 2.53331 3.02441 0.20344 2.88069 39 - -
9900 1.38629 1.38629 1.38629 1.38629
9901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9902 40 2.57915 2.25909 2.64442 0.28946 40 - -
9903 1.38629 1.38629 1.38629 1.38629
9904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9905 41 2.81865 0.23582 2.88868 2.35662 41 - -
9906 1.38629 1.38629 1.38629 1.38629
9907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9908 42 2.53331 3.02441 0.20344 2.88069 42 - -
9909 1.38629 1.38629 1.38629 1.38629
9910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9911 43 2.57915 2.25909 2.64442 0.28946 43 - -
9912 1.38629 1.38629 1.38629 1.38629
9913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9914 44 0.23862 2.84929 2.43386 2.70756 44 - -
9915 1.38629 1.38629 1.38629 1.38629
9916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9917 45 0.23862 2.84929 2.43386 2.70756 45 - -
9918 1.38629 1.38629 1.38629 1.38629
9919 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
9920 //
9921 HMMER3/b [3.0 | March 2010]
9922 NAME 3_End_Metazoa_58S_end_foure_long
9923 LENG 45
9924 ALPH DNA
9925 RF no
9926 CS no
9927 MAP yes
9928 DATE Sat Feb 25 14:32:42 2012
9929 NSEQ 11
9930 EFFN 3.316650
9931 CKSUM 2161723841
9932 STATS LOCAL MSV -8.0237 0.71932
9933 STATS LOCAL VITERBI -7.7980 0.71932
9934 STATS LOCAL FORWARD -4.4690 0.71932
9935 HMM A C G T
9936 m->m m->i m->d i->m i->i d->m d->d
9937 COMPO 1.62968 1.39846 1.25461 1.30253
9938 1.38629 1.38629 1.38629 1.38629
9939 0.03693 4.01036 4.01036 1.46634 0.26236 0.00000 *
9940 1 0.14215 3.37833 2.80067 3.27981 1 - -
9941 1.38629 1.38629 1.38629 1.38629
9942 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9943 2 3.43088 0.13047 3.48043 2.82738 2 - -
9944 1.38629 1.38629 1.38629 1.38629
9945 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9946 3 3.43088 0.13047 3.48043 2.82738 3 - -
9947 1.38629 1.38629 1.38629 1.38629
9948 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9949 4 0.14215 3.37833 2.80067 3.27981 4 - -
9950 1.38629 1.38629 1.38629 1.38629
9951 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9952 5 3.08666 2.59390 3.13489 0.17899 5 - -
9953 1.38629 1.38629 1.38629 1.38629
9954 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9955 6 2.94618 3.58579 0.11737 3.49026 6 - -
9956 1.38629 1.38629 1.38629 1.38629
9957 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9958 7 2.94618 3.58579 0.11737 3.49026 7 - -
9959 1.38629 1.38629 1.38629 1.38629
9960 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9961 8 2.94618 3.58579 0.11737 3.49026 8 - -
9962 1.38629 1.38629 1.38629 1.38629
9963 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9964 9 0.14215 3.37833 2.80067 3.27981 9 - -
9965 1.38629 1.38629 1.38629 1.38629
9966 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9967 10 2.94618 3.58579 0.11737 3.49026 10 - -
9968 1.38629 1.38629 1.38629 1.38629
9969 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9970 11 3.08666 2.59390 3.13489 0.17899 11 - -
9971 1.38629 1.38629 1.38629 1.38629
9972 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9973 12 3.43088 0.13047 3.48043 2.82738 12 - -
9974 1.38629 1.38629 1.38629 1.38629
9975 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9976 13 3.08666 2.59390 3.13489 0.17899 13 - -
9977 1.38629 1.38629 1.38629 1.38629
9978 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9979 14 3.08666 2.59390 3.13489 0.17899 14 - -
9980 1.38629 1.38629 1.38629 1.38629
9981 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9982 15 0.14215 3.37833 2.80067 3.27981 15 - -
9983 1.38629 1.38629 1.38629 1.38629
9984 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9985 16 3.08666 2.59390 3.13489 0.17899 16 - -
9986 1.38629 1.38629 1.38629 1.38629
9987 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9988 17 3.43088 0.13047 3.48043 2.82738 17 - -
9989 1.38629 1.38629 1.38629 1.38629
9990 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9991 18 3.43088 0.13047 3.48043 2.82738 18 - -
9992 1.38629 1.38629 1.38629 1.38629
9993 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9994 19 3.43088 0.13047 3.48043 2.82738 19 - -
9995 1.38629 1.38629 1.38629 1.38629
9996 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
9997 20 3.08666 2.59390 3.13489 0.17899 20 - -
9998 1.38629 1.38629 1.38629 1.38629
9999 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10000 21 3.08666 2.59390 3.13489 0.17899 21 - -
10001 1.38629 1.38629 1.38629 1.38629
10002 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10003 22 2.94618 3.58579 0.11737 3.49026 22 - -
10004 1.38629 1.38629 1.38629 1.38629
10005 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10006 23 2.94618 3.58579 0.11737 3.49026 23 - -
10007 1.38629 1.38629 1.38629 1.38629
10008 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10009 24 3.08666 2.59390 3.13489 0.17899 24 - -
10010 1.38629 1.38629 1.38629 1.38629
10011 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10012 25 0.14215 3.37833 2.80067 3.27981 25 - -
10013 1.38629 1.38629 1.38629 1.38629
10014 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10015 26 2.79049 0.34167 2.85747 1.76836 26 - -
10016 1.38629 1.38629 1.38629 1.38629
10017 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10018 27 2.94618 3.58579 0.11737 3.49026 27 - -
10019 1.38629 1.38629 1.38629 1.38629
10020 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10021 28 3.43088 0.13047 3.48043 2.82738 28 - -
10022 1.38629 1.38629 1.38629 1.38629
10023 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10024 29 3.43088 0.13047 3.48043 2.82738 29 - -
10025 1.38629 1.38629 1.38629 1.38629
10026 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10027 30 3.08666 2.59390 3.13489 0.17899 30 - -
10028 1.38629 1.38629 1.38629 1.38629
10029 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10030 31 2.94618 3.58579 0.11737 3.49026 31 - -
10031 1.38629 1.38629 1.38629 1.38629
10032 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10033 32 2.94618 3.58579 0.11737 3.49026 32 - -
10034 1.38629 1.38629 1.38629 1.38629
10035 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10036 33 3.08666 2.59390 3.13489 0.17899 33 - -
10037 1.38629 1.38629 1.38629 1.38629
10038 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10039 34 3.08666 2.59390 3.13489 0.17899 34 - -
10040 1.38629 1.38629 1.38629 1.38629
10041 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10042 35 3.43088 0.13047 3.48043 2.82738 35 - -
10043 1.38629 1.38629 1.38629 1.38629
10044 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10045 36 0.14215 3.37833 2.80067 3.27981 36 - -
10046 1.38629 1.38629 1.38629 1.38629
10047 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10048 37 2.94618 3.58579 0.11737 3.49026 37 - -
10049 1.38629 1.38629 1.38629 1.38629
10050 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10051 38 2.94618 3.58579 0.11737 3.49026 38 - -
10052 1.38629 1.38629 1.38629 1.38629
10053 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10054 39 2.94618 3.58579 0.11737 3.49026 39 - -
10055 1.38629 1.38629 1.38629 1.38629
10056 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10057 40 3.08666 2.59390 3.13489 0.17899 40 - -
10058 1.38629 1.38629 1.38629 1.38629
10059 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10060 41 3.43088 0.13047 3.48043 2.82738 41 - -
10061 1.38629 1.38629 1.38629 1.38629
10062 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10063 42 2.94618 3.58579 0.11737 3.49026 42 - -
10064 1.38629 1.38629 1.38629 1.38629
10065 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10066 43 3.08666 2.59390 3.13489 0.17899 43 - -
10067 1.38629 1.38629 1.38629 1.38629
10068 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10069 44 0.14215 3.37833 2.80067 3.27981 44 - -
10070 1.38629 1.38629 1.38629 1.38629
10071 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
10072 45 0.14215 3.37833 2.80067 3.27981 45 - -
10073 1.38629 1.38629 1.38629 1.38629
10074 0.01863 3.99206 * 1.46634 0.26236 0.00000 *
10075 //
10076 HMMER3/b [3.0 | March 2010]
10077 NAME 3_End_Metazoa_58S_end_fourf_long
10078 LENG 45
10079 ALPH DNA
10080 RF no
10081 CS no
10082 MAP yes
10083 DATE Sat Feb 25 14:32:48 2012
10084 NSEQ 4
10085 EFFN 3.128906
10086 CKSUM 1932922209
10087 STATS LOCAL MSV -8.1150 0.71933
10088 STATS LOCAL VITERBI -7.8447 0.71933
10089 STATS LOCAL FORWARD -3.8141 0.71933
10090 HMM A C G T
10091 m->m m->i m->d i->m i->i d->m d->d
10092 COMPO 1.47448 1.33557 1.14043 1.66912
10093 1.38629 1.38629 1.38629 1.38629
10094 0.03825 3.97573 3.97573 1.46634 0.26236 0.00000 *
10095 1 2.90228 3.52232 0.12458 3.42031 1 - -
10096 1.38629 1.38629 1.38629 1.38629
10097 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10098 2 3.35912 0.13939 3.41165 2.77481 2 - -
10099 1.38629 1.38629 1.38629 1.38629
10100 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10101 3 3.35912 0.13939 3.41165 2.77481 3 - -
10102 1.38629 1.38629 1.38629 1.38629
10103 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10104 4 0.15066 3.31617 2.76009 3.21184 4 - -
10105 1.38629 1.38629 1.38629 1.38629
10106 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10107 5 3.35912 0.13939 3.41165 2.77481 5 - -
10108 1.38629 1.38629 1.38629 1.38629
10109 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10110 6 3.35912 0.13939 3.41165 2.77481 6 - -
10111 1.38629 1.38629 1.38629 1.38629
10112 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10113 7 2.90228 3.52232 0.12458 3.42031 7 - -
10114 1.38629 1.38629 1.38629 1.38629
10115 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10116 8 2.90228 3.52232 0.12458 3.42031 8 - -
10117 1.38629 1.38629 1.38629 1.38629
10118 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10119 9 0.15066 3.31617 2.76009 3.21184 9 - -
10120 1.38629 1.38629 1.38629 1.38629
10121 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10122 10 2.90228 3.52232 0.12458 3.42031 10 - -
10123 1.38629 1.38629 1.38629 1.38629
10124 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10125 11 3.02437 2.55419 3.07496 0.18939 11 - -
10126 1.38629 1.38629 1.38629 1.38629
10127 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10128 12 0.15066 3.31617 2.76009 3.21184 12 - -
10129 1.38629 1.38629 1.38629 1.38629
10130 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10131 13 0.15066 3.31617 2.76009 3.21184 13 - -
10132 1.38629 1.38629 1.38629 1.38629
10133 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10134 14 3.35912 0.13939 3.41165 2.77481 14 - -
10135 1.38629 1.38629 1.38629 1.38629
10136 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10137 15 0.15066 3.31617 2.76009 3.21184 15 - -
10138 1.38629 1.38629 1.38629 1.38629
10139 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10140 16 3.02437 2.55419 3.07496 0.18939 16 - -
10141 1.38629 1.38629 1.38629 1.38629
10142 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10143 17 3.35912 0.13939 3.41165 2.77481 17 - -
10144 1.38629 1.38629 1.38629 1.38629
10145 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10146 18 0.15066 3.31617 2.76009 3.21184 18 - -
10147 1.38629 1.38629 1.38629 1.38629
10148 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10149 19 2.90228 3.52232 0.12458 3.42031 19 - -
10150 1.38629 1.38629 1.38629 1.38629
10151 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10152 20 2.90228 3.52232 0.12458 3.42031 20 - -
10153 1.38629 1.38629 1.38629 1.38629
10154 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10155 21 3.02437 2.55419 3.07496 0.18939 21 - -
10156 1.38629 1.38629 1.38629 1.38629
10157 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10158 22 2.90228 3.52232 0.12458 3.42031 22 - -
10159 1.38629 1.38629 1.38629 1.38629
10160 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10161 23 2.90228 3.52232 0.12458 3.42031 23 - -
10162 1.38629 1.38629 1.38629 1.38629
10163 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10164 24 3.35912 0.13939 3.41165 2.77481 24 - -
10165 1.38629 1.38629 1.38629 1.38629
10166 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10167 25 0.15066 3.31617 2.76009 3.21184 25 - -
10168 1.38629 1.38629 1.38629 1.38629
10169 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10170 26 3.35912 0.13939 3.41165 2.77481 26 - -
10171 1.38629 1.38629 1.38629 1.38629
10172 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10173 27 2.90228 3.52232 0.12458 3.42031 27 - -
10174 1.38629 1.38629 1.38629 1.38629
10175 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10176 28 3.02437 2.55419 3.07496 0.18939 28 - -
10177 1.38629 1.38629 1.38629 1.38629
10178 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10179 29 3.35912 0.13939 3.41165 2.77481 29 - -
10180 1.38629 1.38629 1.38629 1.38629
10181 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10182 30 3.02437 2.55419 3.07496 0.18939 30 - -
10183 1.38629 1.38629 1.38629 1.38629
10184 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10185 31 2.90228 3.52232 0.12458 3.42031 31 - -
10186 1.38629 1.38629 1.38629 1.38629
10187 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10188 32 2.90228 3.52232 0.12458 3.42031 32 - -
10189 1.38629 1.38629 1.38629 1.38629
10190 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10191 33 3.02437 2.55419 3.07496 0.18939 33 - -
10192 1.38629 1.38629 1.38629 1.38629
10193 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10194 34 3.02437 2.55419 3.07496 0.18939 34 - -
10195 1.38629 1.38629 1.38629 1.38629
10196 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10197 35 3.35912 0.13939 3.41165 2.77481 35 - -
10198 1.38629 1.38629 1.38629 1.38629
10199 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10200 36 0.15066 3.31617 2.76009 3.21184 36 - -
10201 1.38629 1.38629 1.38629 1.38629
10202 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10203 37 2.90228 3.52232 0.12458 3.42031 37 - -
10204 1.38629 1.38629 1.38629 1.38629
10205 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10206 38 2.90228 3.52232 0.12458 3.42031 38 - -
10207 1.38629 1.38629 1.38629 1.38629
10208 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10209 39 2.90228 3.52232 0.12458 3.42031 39 - -
10210 1.38629 1.38629 1.38629 1.38629
10211 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10212 40 3.02437 2.55419 3.07496 0.18939 40 - -
10213 1.38629 1.38629 1.38629 1.38629
10214 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10215 41 3.35912 0.13939 3.41165 2.77481 41 - -
10216 1.38629 1.38629 1.38629 1.38629
10217 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10218 42 2.90228 3.52232 0.12458 3.42031 42 - -
10219 1.38629 1.38629 1.38629 1.38629
10220 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10221 43 0.15066 3.31617 2.76009 3.21184 43 - -
10222 1.38629 1.38629 1.38629 1.38629
10223 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10224 44 3.35912 0.13939 3.41165 2.77481 44 - -
10225 1.38629 1.38629 1.38629 1.38629
10226 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
10227 45 0.15066 3.31617 2.76009 3.21184 45 - -
10228 1.38629 1.38629 1.38629 1.38629
10229 0.01931 3.95679 * 1.46634 0.26236 0.00000 *
10230 //
10231 HMMER3/b [3.0 | March 2010]
10232 NAME 3_End_Metazoa_58S_end_fourg_long
10233 LENG 45
10234 ALPH DNA
10235 RF no
10236 CS no
10237 MAP yes
10238 DATE Sat Feb 25 14:32:53 2012
10239 NSEQ 5
10240 EFFN 3.393555
10241 CKSUM 2530162273
10242 STATS LOCAL MSV -7.5822 0.71932
10243 STATS LOCAL VITERBI -7.7538 0.71932
10244 STATS LOCAL FORWARD -4.3816 0.71932
10245 HMM A C G T
10246 m->m m->i m->d i->m i->i d->m d->d
10247 COMPO 1.59593 1.37767 1.31214 1.28782
10248 1.38629 1.38629 1.38629 1.38629
10249 0.03641 4.02420 4.02420 1.46634 0.26236 0.00000 *
10250 1 2.96311 3.61046 0.11471 3.51750 1 - -
10251 1.38629 1.38629 1.38629 1.38629
10252 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10253 2 3.45893 0.12717 3.50729 2.84776 2 - -
10254 1.38629 1.38629 1.38629 1.38629
10255 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10256 3 3.45893 0.12717 3.50729 2.84776 3 - -
10257 1.38629 1.38629 1.38629 1.38629
10258 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10259 4 0.13897 3.40269 2.81647 3.30648 4 - -
10260 1.38629 1.38629 1.38629 1.38629
10261 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10262 5 3.11130 2.60957 3.15859 0.17506 5 - -
10263 1.38629 1.38629 1.38629 1.38629
10264 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10265 6 3.11130 2.60957 3.15859 0.17506 6 - -
10266 1.38629 1.38629 1.38629 1.38629
10267 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10268 7 2.96311 3.61046 0.11471 3.51750 7 - -
10269 1.38629 1.38629 1.38629 1.38629
10270 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10271 8 2.96311 3.61046 0.11471 3.51750 8 - -
10272 1.38629 1.38629 1.38629 1.38629
10273 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10274 9 0.13897 3.40269 2.81647 3.30648 9 - -
10275 1.38629 1.38629 1.38629 1.38629
10276 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10277 10 2.96311 3.61046 0.11471 3.51750 10 - -
10278 1.38629 1.38629 1.38629 1.38629
10279 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10280 11 3.45893 0.12717 3.50729 2.84776 11 - -
10281 1.38629 1.38629 1.38629 1.38629
10282 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10283 12 0.13897 3.40269 2.81647 3.30648 12 - -
10284 1.38629 1.38629 1.38629 1.38629
10285 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10286 13 0.13897 3.40269 2.81647 3.30648 13 - -
10287 1.38629 1.38629 1.38629 1.38629
10288 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10289 14 3.11130 2.60957 3.15859 0.17506 14 - -
10290 1.38629 1.38629 1.38629 1.38629
10291 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10292 15 0.13897 3.40269 2.81647 3.30648 15 - -
10293 1.38629 1.38629 1.38629 1.38629
10294 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10295 16 3.11130 2.60957 3.15859 0.17506 16 - -
10296 1.38629 1.38629 1.38629 1.38629
10297 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10298 17 3.45893 0.12717 3.50729 2.84776 17 - -
10299 1.38629 1.38629 1.38629 1.38629
10300 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10301 18 3.45893 0.12717 3.50729 2.84776 18 - -
10302 1.38629 1.38629 1.38629 1.38629
10303 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10304 19 3.11130 2.60957 3.15859 0.17506 19 - -
10305 1.38629 1.38629 1.38629 1.38629
10306 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10307 20 3.11130 2.60957 3.15859 0.17506 20 - -
10308 1.38629 1.38629 1.38629 1.38629
10309 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10310 21 3.11130 2.60957 3.15859 0.17506 21 - -
10311 1.38629 1.38629 1.38629 1.38629
10312 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10313 22 2.96311 3.61046 0.11471 3.51750 22 - -
10314 1.38629 1.38629 1.38629 1.38629
10315 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10316 23 2.96311 3.61046 0.11471 3.51750 23 - -
10317 1.38629 1.38629 1.38629 1.38629
10318 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10319 24 3.45893 0.12717 3.50729 2.84776 24 - -
10320 1.38629 1.38629 1.38629 1.38629
10321 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10322 25 0.13897 3.40269 2.81647 3.30648 25 - -
10323 1.38629 1.38629 1.38629 1.38629
10324 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10325 26 3.11130 2.60957 3.15859 0.17506 26 - -
10326 1.38629 1.38629 1.38629 1.38629
10327 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10328 27 2.96311 3.61046 0.11471 3.51750 27 - -
10329 1.38629 1.38629 1.38629 1.38629
10330 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10331 28 3.45893 0.12717 3.50729 2.84776 28 - -
10332 1.38629 1.38629 1.38629 1.38629
10333 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10334 29 3.11130 2.60957 3.15859 0.17506 29 - -
10335 1.38629 1.38629 1.38629 1.38629
10336 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10337 30 3.11130 2.60957 3.15859 0.17506 30 - -
10338 1.38629 1.38629 1.38629 1.38629
10339 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10340 31 3.11130 2.60957 3.15859 0.17506 31 - -
10341 1.38629 1.38629 1.38629 1.38629
10342 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10343 32 2.96311 3.61046 0.11471 3.51750 32 - -
10344 1.38629 1.38629 1.38629 1.38629
10345 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10346 33 3.45893 0.12717 3.50729 2.84776 33 - -
10347 1.38629 1.38629 1.38629 1.38629
10348 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10349 34 3.11130 2.60957 3.15859 0.17506 34 - -
10350 1.38629 1.38629 1.38629 1.38629
10351 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10352 35 3.45893 0.12717 3.50729 2.84776 35 - -
10353 1.38629 1.38629 1.38629 1.38629
10354 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10355 36 0.13897 3.40269 2.81647 3.30648 36 - -
10356 1.38629 1.38629 1.38629 1.38629
10357 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10358 37 2.96311 3.61046 0.11471 3.51750 37 - -
10359 1.38629 1.38629 1.38629 1.38629
10360 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10361 38 2.96311 3.61046 0.11471 3.51750 38 - -
10362 1.38629 1.38629 1.38629 1.38629
10363 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10364 39 2.96311 3.61046 0.11471 3.51750 39 - -
10365 1.38629 1.38629 1.38629 1.38629
10366 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10367 40 3.11130 2.60957 3.15859 0.17506 40 - -
10368 1.38629 1.38629 1.38629 1.38629
10369 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10370 41 3.45893 0.12717 3.50729 2.84776 41 - -
10371 1.38629 1.38629 1.38629 1.38629
10372 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10373 42 2.96311 3.61046 0.11471 3.51750 42 - -
10374 1.38629 1.38629 1.38629 1.38629
10375 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10376 43 3.45893 0.12717 3.50729 2.84776 43 - -
10377 1.38629 1.38629 1.38629 1.38629
10378 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10379 44 0.13897 3.40269 2.81647 3.30648 44 - -
10380 1.38629 1.38629 1.38629 1.38629
10381 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
10382 45 0.79222 2.19683 2.17515 1.13191 45 - -
10383 1.38629 1.38629 1.38629 1.38629
10384 0.01837 4.00616 * 1.46634 0.26236 0.00000 *
10385 //
10386 HMMER3/b [3.0 | March 2010]
10387 NAME 3_End_Metazoa_58S_end_fourh_long
10388 LENG 45
10389 ALPH DNA
10390 RF no
10391 CS no
10392 MAP yes
10393 DATE Sat Feb 25 14:33:01 2012
10394 NSEQ 2
10395 EFFN 2.000000
10396 CKSUM 333148079
10397 STATS LOCAL MSV -7.4549 0.72791
10398 STATS LOCAL VITERBI -8.4904 0.72791
10399 STATS LOCAL FORWARD -3.4224 0.72791
10400 HMM A C G T
10401 m->m m->i m->d i->m i->i d->m d->d
10402 COMPO 1.74078 1.33732 1.21673 1.32475
10403 1.38629 1.38629 1.38629 1.38629
10404 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
10405 1 2.53331 3.02441 0.20344 2.88069 1 - -
10406 1.38629 1.38629 1.38629 1.38629
10407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10408 2 2.81865 0.23582 2.88868 2.35662 2 - -
10409 1.38629 1.38629 1.38629 1.38629
10410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10411 3 2.81865 0.23582 2.88868 2.35662 3 - -
10412 1.38629 1.38629 1.38629 1.38629
10413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10414 4 0.23862 2.84929 2.43386 2.70756 4 - -
10415 1.38629 1.38629 1.38629 1.38629
10416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10417 5 2.57915 2.25909 2.64442 0.28946 5 - -
10418 1.38629 1.38629 1.38629 1.38629
10419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10420 6 2.57915 2.25909 2.64442 0.28946 6 - -
10421 1.38629 1.38629 1.38629 1.38629
10422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10423 7 2.53331 3.02441 0.20344 2.88069 7 - -
10424 1.38629 1.38629 1.38629 1.38629
10425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10426 8 2.53331 3.02441 0.20344 2.88069 8 - -
10427 1.38629 1.38629 1.38629 1.38629
10428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10429 9 0.23862 2.84929 2.43386 2.70756 9 - -
10430 1.38629 1.38629 1.38629 1.38629
10431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10432 10 2.57915 2.25909 2.64442 0.28946 10 - -
10433 1.38629 1.38629 1.38629 1.38629
10434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10435 11 2.81865 0.23582 2.88868 2.35662 11 - -
10436 1.38629 1.38629 1.38629 1.38629
10437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10438 12 2.81865 0.23582 2.88868 2.35662 12 - -
10439 1.38629 1.38629 1.38629 1.38629
10440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10441 13 0.23862 2.84929 2.43386 2.70756 13 - -
10442 1.38629 1.38629 1.38629 1.38629
10443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10444 14 2.81865 0.23582 2.88868 2.35662 14 - -
10445 1.38629 1.38629 1.38629 1.38629
10446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10447 15 2.53331 3.02441 0.20344 2.88069 15 - -
10448 1.38629 1.38629 1.38629 1.38629
10449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10450 16 2.57915 2.25909 2.64442 0.28946 16 - -
10451 1.38629 1.38629 1.38629 1.38629
10452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10453 17 2.81865 0.23582 2.88868 2.35662 17 - -
10454 1.38629 1.38629 1.38629 1.38629
10455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10456 18 2.81865 0.23582 2.88868 2.35662 18 - -
10457 1.38629 1.38629 1.38629 1.38629
10458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10459 19 2.57915 2.25909 2.64442 0.28946 19 - -
10460 1.38629 1.38629 1.38629 1.38629
10461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10462 20 2.57915 2.25909 2.64442 0.28946 20 - -
10463 1.38629 1.38629 1.38629 1.38629
10464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10465 21 2.57915 2.25909 2.64442 0.28946 21 - -
10466 1.38629 1.38629 1.38629 1.38629
10467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10468 22 2.53331 3.02441 0.20344 2.88069 22 - -
10469 1.38629 1.38629 1.38629 1.38629
10470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10471 23 2.53331 3.02441 0.20344 2.88069 23 - -
10472 1.38629 1.38629 1.38629 1.38629
10473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10474 24 2.81865 0.23582 2.88868 2.35662 24 - -
10475 1.38629 1.38629 1.38629 1.38629
10476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10477 25 2.57915 2.25909 2.64442 0.28946 25 - -
10478 1.38629 1.38629 1.38629 1.38629
10479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10480 26 2.81865 0.23582 2.88868 2.35662 26 - -
10481 1.38629 1.38629 1.38629 1.38629
10482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10483 27 2.53331 3.02441 0.20344 2.88069 27 - -
10484 1.38629 1.38629 1.38629 1.38629
10485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10486 28 2.53331 3.02441 0.20344 2.88069 28 - -
10487 1.38629 1.38629 1.38629 1.38629
10488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10489 29 2.81865 0.23582 2.88868 2.35662 29 - -
10490 1.38629 1.38629 1.38629 1.38629
10491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10492 30 2.57915 2.25909 2.64442 0.28946 30 - -
10493 1.38629 1.38629 1.38629 1.38629
10494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10495 31 2.53331 3.02441 0.20344 2.88069 31 - -
10496 1.38629 1.38629 1.38629 1.38629
10497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10498 32 2.53331 3.02441 0.20344 2.88069 32 - -
10499 1.38629 1.38629 1.38629 1.38629
10500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10501 33 2.57915 2.25909 2.64442 0.28946 33 - -
10502 1.38629 1.38629 1.38629 1.38629
10503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10504 34 2.57915 2.25909 2.64442 0.28946 34 - -
10505 1.38629 1.38629 1.38629 1.38629
10506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10507 35 2.81865 0.23582 2.88868 2.35662 35 - -
10508 1.38629 1.38629 1.38629 1.38629
10509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10510 36 0.23862 2.84929 2.43386 2.70756 36 - -
10511 1.38629 1.38629 1.38629 1.38629
10512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10513 37 2.53331 3.02441 0.20344 2.88069 37 - -
10514 1.38629 1.38629 1.38629 1.38629
10515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10516 38 2.53331 3.02441 0.20344 2.88069 38 - -
10517 1.38629 1.38629 1.38629 1.38629
10518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10519 39 2.53331 3.02441 0.20344 2.88069 39 - -
10520 1.38629 1.38629 1.38629 1.38629
10521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10522 40 2.57915 2.25909 2.64442 0.28946 40 - -
10523 1.38629 1.38629 1.38629 1.38629
10524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10525 41 2.81865 0.23582 2.88868 2.35662 41 - -
10526 1.38629 1.38629 1.38629 1.38629
10527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10528 42 2.53331 3.02441 0.20344 2.88069 42 - -
10529 1.38629 1.38629 1.38629 1.38629
10530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10531 43 2.57915 2.25909 2.64442 0.28946 43 - -
10532 1.38629 1.38629 1.38629 1.38629
10533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10534 44 0.23862 2.84929 2.43386 2.70756 44 - -
10535 1.38629 1.38629 1.38629 1.38629
10536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10537 45 0.23862 2.84929 2.43386 2.70756 45 - -
10538 1.38629 1.38629 1.38629 1.38629
10539 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
10540 //
10541 HMMER3/b [3.0 | March 2010]
10542 NAME 3_End_Metazoa_58S_end_fouri_long
10543 LENG 45
10544 ALPH DNA
10545 RF no
10546 CS no
10547 MAP yes
10548 DATE Sat Feb 25 14:33:06 2012
10549 NSEQ 2
10550 EFFN 2.000000
10551 CKSUM 260246692
10552 STATS LOCAL MSV -7.3876 0.72866
10553 STATS LOCAL VITERBI -8.2977 0.72866
10554 STATS LOCAL FORWARD -3.4092 0.72866
10555 HMM A C G T
10556 m->m m->i m->d i->m i->i d->m d->d
10557 COMPO 1.79394 1.27631 1.26577 1.29972
10558 1.38629 1.38629 1.38629 1.38629
10559 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
10560 1 2.53331 3.02441 0.20344 2.88069 1 - -
10561 1.38629 1.38629 1.38629 1.38629
10562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10563 2 2.81865 0.23582 2.88868 2.35662 2 - -
10564 1.38629 1.38629 1.38629 1.38629
10565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10566 3 2.81865 0.23582 2.88868 2.35662 3 - -
10567 1.38629 1.38629 1.38629 1.38629
10568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10569 4 0.23862 2.84929 2.43386 2.70756 4 - -
10570 1.38629 1.38629 1.38629 1.38629
10571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10572 5 2.57915 2.25909 2.64442 0.28946 5 - -
10573 1.38629 1.38629 1.38629 1.38629
10574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10575 6 2.57915 2.25909 2.64442 0.28946 6 - -
10576 1.38629 1.38629 1.38629 1.38629
10577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10578 7 2.53331 3.02441 0.20344 2.88069 7 - -
10579 1.38629 1.38629 1.38629 1.38629
10580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10581 8 2.53331 3.02441 0.20344 2.88069 8 - -
10582 1.38629 1.38629 1.38629 1.38629
10583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10584 9 0.23862 2.84929 2.43386 2.70756 9 - -
10585 1.38629 1.38629 1.38629 1.38629
10586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10587 10 2.53331 3.02441 0.20344 2.88069 10 - -
10588 1.38629 1.38629 1.38629 1.38629
10589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10590 11 2.57915 2.25909 2.64442 0.28946 11 - -
10591 1.38629 1.38629 1.38629 1.38629
10592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10593 12 2.81865 0.23582 2.88868 2.35662 12 - -
10594 1.38629 1.38629 1.38629 1.38629
10595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10596 13 0.23862 2.84929 2.43386 2.70756 13 - -
10597 1.38629 1.38629 1.38629 1.38629
10598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10599 14 2.81865 0.23582 2.88868 2.35662 14 - -
10600 1.38629 1.38629 1.38629 1.38629
10601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10602 15 2.57915 2.25909 2.64442 0.28946 15 - -
10603 1.38629 1.38629 1.38629 1.38629
10604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10605 16 2.57915 2.25909 2.64442 0.28946 16 - -
10606 1.38629 1.38629 1.38629 1.38629
10607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10608 17 2.81865 0.23582 2.88868 2.35662 17 - -
10609 1.38629 1.38629 1.38629 1.38629
10610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10611 18 2.81865 0.23582 2.88868 2.35662 18 - -
10612 1.38629 1.38629 1.38629 1.38629
10613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10614 19 2.57915 2.25909 2.64442 0.28946 19 - -
10615 1.38629 1.38629 1.38629 1.38629
10616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10617 20 2.81865 0.23582 2.88868 2.35662 20 - -
10618 1.38629 1.38629 1.38629 1.38629
10619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10620 21 2.57915 2.25909 2.64442 0.28946 21 - -
10621 1.38629 1.38629 1.38629 1.38629
10622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10623 22 2.53331 3.02441 0.20344 2.88069 22 - -
10624 1.38629 1.38629 1.38629 1.38629
10625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10626 23 2.53331 3.02441 0.20344 2.88069 23 - -
10627 1.38629 1.38629 1.38629 1.38629
10628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10629 24 2.81865 0.23582 2.88868 2.35662 24 - -
10630 1.38629 1.38629 1.38629 1.38629
10631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10632 25 0.23862 2.84929 2.43386 2.70756 25 - -
10633 1.38629 1.38629 1.38629 1.38629
10634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10635 26 2.81865 0.23582 2.88868 2.35662 26 - -
10636 1.38629 1.38629 1.38629 1.38629
10637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10638 27 2.53331 3.02441 0.20344 2.88069 27 - -
10639 1.38629 1.38629 1.38629 1.38629
10640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10641 28 2.81865 0.23582 2.88868 2.35662 28 - -
10642 1.38629 1.38629 1.38629 1.38629
10643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10644 29 2.81865 0.23582 2.88868 2.35662 29 - -
10645 1.38629 1.38629 1.38629 1.38629
10646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10647 30 2.57915 2.25909 2.64442 0.28946 30 - -
10648 1.38629 1.38629 1.38629 1.38629
10649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10650 31 2.53331 3.02441 0.20344 2.88069 31 - -
10651 1.38629 1.38629 1.38629 1.38629
10652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10653 32 2.53331 3.02441 0.20344 2.88069 32 - -
10654 1.38629 1.38629 1.38629 1.38629
10655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10656 33 2.57915 2.25909 2.64442 0.28946 33 - -
10657 1.38629 1.38629 1.38629 1.38629
10658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10659 34 2.57915 2.25909 2.64442 0.28946 34 - -
10660 1.38629 1.38629 1.38629 1.38629
10661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10662 35 2.81865 0.23582 2.88868 2.35662 35 - -
10663 1.38629 1.38629 1.38629 1.38629
10664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10665 36 0.23862 2.84929 2.43386 2.70756 36 - -
10666 1.38629 1.38629 1.38629 1.38629
10667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10668 37 2.53331 3.02441 0.20344 2.88069 37 - -
10669 1.38629 1.38629 1.38629 1.38629
10670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10671 38 2.53331 3.02441 0.20344 2.88069 38 - -
10672 1.38629 1.38629 1.38629 1.38629
10673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10674 39 2.53331 3.02441 0.20344 2.88069 39 - -
10675 1.38629 1.38629 1.38629 1.38629
10676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10677 40 2.57915 2.25909 2.64442 0.28946 40 - -
10678 1.38629 1.38629 1.38629 1.38629
10679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10680 41 2.81865 0.23582 2.88868 2.35662 41 - -
10681 1.38629 1.38629 1.38629 1.38629
10682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10683 42 2.53331 3.02441 0.20344 2.88069 42 - -
10684 1.38629 1.38629 1.38629 1.38629
10685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10686 43 2.57915 2.25909 2.64442 0.28946 43 - -
10687 1.38629 1.38629 1.38629 1.38629
10688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10689 44 2.57915 2.25909 2.64442 0.28946 44 - -
10690 1.38629 1.38629 1.38629 1.38629
10691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10692 45 1.03732 1.95876 1.96551 1.00928 45 - -
10693 1.38629 1.38629 1.38629 1.38629
10694 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
10695 //
10696 HMMER3/b [3.0 | March 2010]
10697 NAME 3_End_Metazoa_58S_end_fourj_long
10698 LENG 45
10699 ALPH DNA
10700 RF no
10701 CS no
10702 MAP yes
10703 DATE Sat Feb 25 14:33:11 2012
10704 NSEQ 2
10705 EFFN 2.000000
10706 CKSUM 1948886469
10707 STATS LOCAL MSV -7.4799 0.72830
10708 STATS LOCAL VITERBI -8.3137 0.72830
10709 STATS LOCAL FORWARD -3.4645 0.72830
10710 HMM A C G T
10711 m->m m->i m->d i->m i->i d->m d->d
10712 COMPO 1.82855 1.27493 1.32534 1.22353
10713 1.38629 1.38629 1.38629 1.38629
10714 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
10715 1 2.53331 3.02441 0.20344 2.88069 1 - -
10716 1.38629 1.38629 1.38629 1.38629
10717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10718 2 2.81865 0.23582 2.88868 2.35662 2 - -
10719 1.38629 1.38629 1.38629 1.38629
10720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10721 3 2.81865 0.23582 2.88868 2.35662 3 - -
10722 1.38629 1.38629 1.38629 1.38629
10723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10724 4 0.23862 2.84929 2.43386 2.70756 4 - -
10725 1.38629 1.38629 1.38629 1.38629
10726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10727 5 2.57915 2.25909 2.64442 0.28946 5 - -
10728 1.38629 1.38629 1.38629 1.38629
10729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10730 6 2.57915 2.25909 2.64442 0.28946 6 - -
10731 1.38629 1.38629 1.38629 1.38629
10732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10733 7 2.53331 3.02441 0.20344 2.88069 7 - -
10734 1.38629 1.38629 1.38629 1.38629
10735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10736 8 2.53331 3.02441 0.20344 2.88069 8 - -
10737 1.38629 1.38629 1.38629 1.38629
10738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10739 9 0.23862 2.84929 2.43386 2.70756 9 - -
10740 1.38629 1.38629 1.38629 1.38629
10741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10742 10 2.53331 3.02441 0.20344 2.88069 10 - -
10743 1.38629 1.38629 1.38629 1.38629
10744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10745 11 2.57915 2.25909 2.64442 0.28946 11 - -
10746 1.38629 1.38629 1.38629 1.38629
10747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10748 12 2.81865 0.23582 2.88868 2.35662 12 - -
10749 1.38629 1.38629 1.38629 1.38629
10750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10751 13 2.57915 2.25909 2.64442 0.28946 13 - -
10752 1.38629 1.38629 1.38629 1.38629
10753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10754 14 2.81865 0.23582 2.88868 2.35662 14 - -
10755 1.38629 1.38629 1.38629 1.38629
10756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10757 15 2.57915 2.25909 2.64442 0.28946 15 - -
10758 1.38629 1.38629 1.38629 1.38629
10759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10760 16 2.57915 2.25909 2.64442 0.28946 16 - -
10761 1.38629 1.38629 1.38629 1.38629
10762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10763 17 2.81865 0.23582 2.88868 2.35662 17 - -
10764 1.38629 1.38629 1.38629 1.38629
10765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10766 18 2.81865 0.23582 2.88868 2.35662 18 - -
10767 1.38629 1.38629 1.38629 1.38629
10768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10769 19 2.57915 2.25909 2.64442 0.28946 19 - -
10770 1.38629 1.38629 1.38629 1.38629
10771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10772 20 2.57915 2.25909 2.64442 0.28946 20 - -
10773 1.38629 1.38629 1.38629 1.38629
10774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10775 21 2.57915 2.25909 2.64442 0.28946 21 - -
10776 1.38629 1.38629 1.38629 1.38629
10777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10778 22 2.53331 3.02441 0.20344 2.88069 22 - -
10779 1.38629 1.38629 1.38629 1.38629
10780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10781 23 2.53331 3.02441 0.20344 2.88069 23 - -
10782 1.38629 1.38629 1.38629 1.38629
10783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10784 24 2.81865 0.23582 2.88868 2.35662 24 - -
10785 1.38629 1.38629 1.38629 1.38629
10786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10787 25 0.23862 2.84929 2.43386 2.70756 25 - -
10788 1.38629 1.38629 1.38629 1.38629
10789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10790 26 2.81865 0.23582 2.88868 2.35662 26 - -
10791 1.38629 1.38629 1.38629 1.38629
10792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10793 27 2.53331 3.02441 0.20344 2.88069 27 - -
10794 1.38629 1.38629 1.38629 1.38629
10795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10796 28 2.81865 0.23582 2.88868 2.35662 28 - -
10797 1.38629 1.38629 1.38629 1.38629
10798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10799 29 2.81865 0.23582 2.88868 2.35662 29 - -
10800 1.38629 1.38629 1.38629 1.38629
10801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10802 30 2.57915 2.25909 2.64442 0.28946 30 - -
10803 1.38629 1.38629 1.38629 1.38629
10804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10805 31 2.57915 2.25909 2.64442 0.28946 31 - -
10806 1.38629 1.38629 1.38629 1.38629
10807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10808 32 2.53331 3.02441 0.20344 2.88069 32 - -
10809 1.38629 1.38629 1.38629 1.38629
10810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10811 33 2.57915 2.25909 2.64442 0.28946 33 - -
10812 1.38629 1.38629 1.38629 1.38629
10813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10814 34 2.57915 2.25909 2.64442 0.28946 34 - -
10815 1.38629 1.38629 1.38629 1.38629
10816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10817 35 2.81865 0.23582 2.88868 2.35662 35 - -
10818 1.38629 1.38629 1.38629 1.38629
10819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10820 36 0.23862 2.84929 2.43386 2.70756 36 - -
10821 1.38629 1.38629 1.38629 1.38629
10822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10823 37 2.53331 3.02441 0.20344 2.88069 37 - -
10824 1.38629 1.38629 1.38629 1.38629
10825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10826 38 2.53331 3.02441 0.20344 2.88069 38 - -
10827 1.38629 1.38629 1.38629 1.38629
10828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10829 39 2.53331 3.02441 0.20344 2.88069 39 - -
10830 1.38629 1.38629 1.38629 1.38629
10831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10832 40 2.57915 2.25909 2.64442 0.28946 40 - -
10833 1.38629 1.38629 1.38629 1.38629
10834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10835 41 2.81865 0.23582 2.88868 2.35662 41 - -
10836 1.38629 1.38629 1.38629 1.38629
10837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10838 42 2.53331 3.02441 0.20344 2.88069 42 - -
10839 1.38629 1.38629 1.38629 1.38629
10840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10841 43 2.57915 2.25909 2.64442 0.28946 43 - -
10842 1.38629 1.38629 1.38629 1.38629
10843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10844 44 2.81865 0.23582 2.88868 2.35662 44 - -
10845 1.38629 1.38629 1.38629 1.38629
10846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10847 45 0.23862 2.84929 2.43386 2.70756 45 - -
10848 1.38629 1.38629 1.38629 1.38629
10849 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
10850 //
10851 HMMER3/b [3.0 | March 2010]
10852 NAME 3_End_Metazoa_58S_end_fourk_long
10853 LENG 45
10854 ALPH DNA
10855 RF no
10856 CS no
10857 MAP yes
10858 DATE Sat Feb 25 14:33:16 2012
10859 NSEQ 9
10860 EFFN 3.247559
10861 CKSUM 3053590484
10862 STATS LOCAL MSV -7.9269 0.71933
10863 STATS LOCAL VITERBI -7.7723 0.71933
10864 STATS LOCAL FORWARD -3.9915 0.71933
10865 HMM A C G T
10866 m->m m->i m->d i->m i->i d->m d->d
10867 COMPO 1.63624 1.31777 1.31835 1.30940
10868 1.38629 1.38629 1.38629 1.38629
10869 0.03740 3.99775 3.99775 1.46634 0.26236 0.00000 *
10870 1 2.93046 3.56298 0.11991 3.46510 1 - -
10871 1.38629 1.38629 1.38629 1.38629
10872 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10873 2 3.40502 0.13361 3.45566 2.80851 2 - -
10874 1.38629 1.38629 1.38629 1.38629
10875 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10876 3 3.40502 0.13361 3.45566 2.80851 3 - -
10877 1.38629 1.38629 1.38629 1.38629
10878 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10879 4 0.14515 3.35591 2.78608 3.25528 4 - -
10880 1.38629 1.38629 1.38629 1.38629
10881 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10882 5 3.06409 2.57953 3.11318 0.18268 5 - -
10883 1.38629 1.38629 1.38629 1.38629
10884 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10885 6 3.06409 2.57953 3.11318 0.18268 6 - -
10886 1.38629 1.38629 1.38629 1.38629
10887 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10888 7 2.93046 3.56298 0.11991 3.46510 7 - -
10889 1.38629 1.38629 1.38629 1.38629
10890 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10891 8 2.93046 3.56298 0.11991 3.46510 8 - -
10892 1.38629 1.38629 1.38629 1.38629
10893 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10894 9 0.14515 3.35591 2.78608 3.25528 9 - -
10895 1.38629 1.38629 1.38629 1.38629
10896 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10897 10 2.93046 3.56298 0.11991 3.46510 10 - -
10898 1.38629 1.38629 1.38629 1.38629
10899 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10900 11 3.06409 2.57953 3.11318 0.18268 11 - -
10901 1.38629 1.38629 1.38629 1.38629
10902 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10903 12 3.40502 0.13361 3.45566 2.80851 12 - -
10904 1.38629 1.38629 1.38629 1.38629
10905 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10906 13 0.14515 3.35591 2.78608 3.25528 13 - -
10907 1.38629 1.38629 1.38629 1.38629
10908 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10909 14 3.40502 0.13361 3.45566 2.80851 14 - -
10910 1.38629 1.38629 1.38629 1.38629
10911 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10912 15 3.06409 2.57953 3.11318 0.18268 15 - -
10913 1.38629 1.38629 1.38629 1.38629
10914 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10915 16 3.06409 2.57953 3.11318 0.18268 16 - -
10916 1.38629 1.38629 1.38629 1.38629
10917 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10918 17 3.40502 0.13361 3.45566 2.80851 17 - -
10919 1.38629 1.38629 1.38629 1.38629
10920 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10921 18 3.40502 0.13361 3.45566 2.80851 18 - -
10922 1.38629 1.38629 1.38629 1.38629
10923 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10924 19 3.06409 2.57953 3.11318 0.18268 19 - -
10925 1.38629 1.38629 1.38629 1.38629
10926 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10927 20 0.14515 3.35591 2.78608 3.25528 20 - -
10928 1.38629 1.38629 1.38629 1.38629
10929 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10930 21 3.06409 2.57953 3.11318 0.18268 21 - -
10931 1.38629 1.38629 1.38629 1.38629
10932 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10933 22 2.93046 3.56298 0.11991 3.46510 22 - -
10934 1.38629 1.38629 1.38629 1.38629
10935 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10936 23 2.93046 3.56298 0.11991 3.46510 23 - -
10937 1.38629 1.38629 1.38629 1.38629
10938 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10939 24 3.40502 0.13361 3.45566 2.80851 24 - -
10940 1.38629 1.38629 1.38629 1.38629
10941 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10942 25 0.14515 3.35591 2.78608 3.25528 25 - -
10943 1.38629 1.38629 1.38629 1.38629
10944 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10945 26 3.40502 0.13361 3.45566 2.80851 26 - -
10946 1.38629 1.38629 1.38629 1.38629
10947 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10948 27 2.93046 3.56298 0.11991 3.46510 27 - -
10949 1.38629 1.38629 1.38629 1.38629
10950 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10951 28 3.40502 0.13361 3.45566 2.80851 28 - -
10952 1.38629 1.38629 1.38629 1.38629
10953 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10954 29 3.40502 0.13361 3.45566 2.80851 29 - -
10955 1.38629 1.38629 1.38629 1.38629
10956 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10957 30 3.06409 2.57953 3.11318 0.18268 30 - -
10958 1.38629 1.38629 1.38629 1.38629
10959 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10960 31 2.93046 3.56298 0.11991 3.46510 31 - -
10961 1.38629 1.38629 1.38629 1.38629
10962 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10963 32 2.93046 3.56298 0.11991 3.46510 32 - -
10964 1.38629 1.38629 1.38629 1.38629
10965 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10966 33 3.06409 2.57953 3.11318 0.18268 33 - -
10967 1.38629 1.38629 1.38629 1.38629
10968 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10969 34 3.06409 2.57953 3.11318 0.18268 34 - -
10970 1.38629 1.38629 1.38629 1.38629
10971 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10972 35 3.40502 0.13361 3.45566 2.80851 35 - -
10973 1.38629 1.38629 1.38629 1.38629
10974 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10975 36 0.14515 3.35591 2.78608 3.25528 36 - -
10976 1.38629 1.38629 1.38629 1.38629
10977 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10978 37 2.93046 3.56298 0.11991 3.46510 37 - -
10979 1.38629 1.38629 1.38629 1.38629
10980 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10981 38 2.93046 3.56298 0.11991 3.46510 38 - -
10982 1.38629 1.38629 1.38629 1.38629
10983 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10984 39 2.93046 3.56298 0.11991 3.46510 39 - -
10985 1.38629 1.38629 1.38629 1.38629
10986 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10987 40 3.06409 2.57953 3.11318 0.18268 40 - -
10988 1.38629 1.38629 1.38629 1.38629
10989 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10990 41 3.40502 0.13361 3.45566 2.80851 41 - -
10991 1.38629 1.38629 1.38629 1.38629
10992 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10993 42 0.14515 3.35591 2.78608 3.25528 42 - -
10994 1.38629 1.38629 1.38629 1.38629
10995 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10996 43 3.06409 2.57953 3.11318 0.18268 43 - -
10997 1.38629 1.38629 1.38629 1.38629
10998 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
10999 44 3.06409 2.57953 3.11318 0.18268 44 - -
11000 1.38629 1.38629 1.38629 1.38629
11001 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547
11002 45 0.14515 3.35591 2.78608 3.25528 45 - -
11003 1.38629 1.38629 1.38629 1.38629
11004 0.01888 3.97923 * 1.46634 0.26236 0.00000 *
11005 //
11006 HMMER3/b [3.0 | March 2010]
11007 NAME 3_End_Metazoa_58S_end_fourl_long
11008 LENG 45
11009 ALPH DNA
11010 RF no
11011 CS no
11012 MAP yes
11013 DATE Sat Feb 25 14:33:21 2012
11014 NSEQ 11
11015 EFFN 3.338135
11016 CKSUM 767105334
11017 STATS LOCAL MSV -8.1570 0.71932
11018 STATS LOCAL VITERBI -7.7500 0.71932
11019 STATS LOCAL FORWARD -4.0357 0.71932
11020 HMM A C G T
11021 m->m m->i m->d i->m i->i d->m d->d
11022 COMPO 1.55301 1.25359 1.40308 1.35840
11023 1.38629 1.38629 1.38629 1.38629
11024 0.03678 4.01424 4.01424 1.46634 0.26236 0.00000 *
11025 1 2.95097 3.59276 0.11661 3.49795 1 - -
11026 1.38629 1.38629 1.38629 1.38629
11027 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11028 2 3.43879 0.12953 3.48801 2.83314 2 - -
11029 1.38629 1.38629 1.38629 1.38629
11030 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11031 3 3.43879 0.12953 3.48801 2.83314 3 - -
11032 1.38629 1.38629 1.38629 1.38629
11033 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11034 4 0.14124 3.38520 2.80513 3.28733 4 - -
11035 1.38629 1.38629 1.38629 1.38629
11036 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11037 5 3.09359 2.59831 3.14156 0.17788 5 - -
11038 1.38629 1.38629 1.38629 1.38629
11039 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11040 6 3.09359 2.59831 3.14156 0.17788 6 - -
11041 1.38629 1.38629 1.38629 1.38629
11042 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11043 7 2.95097 3.59276 0.11661 3.49795 7 - -
11044 1.38629 1.38629 1.38629 1.38629
11045 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11046 8 2.95097 3.59276 0.11661 3.49795 8 - -
11047 1.38629 1.38629 1.38629 1.38629
11048 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11049 9 0.14124 3.38520 2.80513 3.28733 9 - -
11050 1.38629 1.38629 1.38629 1.38629
11051 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11052 10 3.09359 2.59831 3.14156 0.17788 10 - -
11053 1.38629 1.38629 1.38629 1.38629
11054 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11055 11 3.09359 2.59831 3.14156 0.17788 11 - -
11056 1.38629 1.38629 1.38629 1.38629
11057 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11058 12 3.43879 0.12953 3.48801 2.83314 12 - -
11059 1.38629 1.38629 1.38629 1.38629
11060 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11061 13 0.14124 3.38520 2.80513 3.28733 13 - -
11062 1.38629 1.38629 1.38629 1.38629
11063 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11064 14 3.43879 0.12953 3.48801 2.83314 14 - -
11065 1.38629 1.38629 1.38629 1.38629
11066 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11067 15 0.14124 3.38520 2.80513 3.28733 15 - -
11068 1.38629 1.38629 1.38629 1.38629
11069 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11070 16 3.09359 2.59831 3.14156 0.17788 16 - -
11071 1.38629 1.38629 1.38629 1.38629
11072 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11073 17 3.43879 0.12953 3.48801 2.83314 17 - -
11074 1.38629 1.38629 1.38629 1.38629
11075 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11076 18 3.43879 0.12953 3.48801 2.83314 18 - -
11077 1.38629 1.38629 1.38629 1.38629
11078 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11079 19 3.09359 2.59831 3.14156 0.17788 19 - -
11080 1.38629 1.38629 1.38629 1.38629
11081 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11082 20 3.43879 0.12953 3.48801 2.83314 20 - -
11083 1.38629 1.38629 1.38629 1.38629
11084 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11085 21 3.09359 2.59831 3.14156 0.17788 21 - -
11086 1.38629 1.38629 1.38629 1.38629
11087 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11088 22 2.95097 3.59276 0.11661 3.49795 22 - -
11089 1.38629 1.38629 1.38629 1.38629
11090 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11091 23 2.95097 3.59276 0.11661 3.49795 23 - -
11092 1.38629 1.38629 1.38629 1.38629
11093 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11094 24 3.43879 0.12953 3.48801 2.83314 24 - -
11095 1.38629 1.38629 1.38629 1.38629
11096 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11097 25 0.14124 3.38520 2.80513 3.28733 25 - -
11098 1.38629 1.38629 1.38629 1.38629
11099 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11100 26 3.43879 0.12953 3.48801 2.83314 26 - -
11101 1.38629 1.38629 1.38629 1.38629
11102 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11103 27 2.95097 3.59276 0.11661 3.49795 27 - -
11104 1.38629 1.38629 1.38629 1.38629
11105 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11106 28 3.43879 0.12953 3.48801 2.83314 28 - -
11107 1.38629 1.38629 1.38629 1.38629
11108 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11109 29 3.43879 0.12953 3.48801 2.83314 29 - -
11110 1.38629 1.38629 1.38629 1.38629
11111 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11112 30 3.09359 2.59831 3.14156 0.17788 30 - -
11113 1.38629 1.38629 1.38629 1.38629
11114 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11115 31 2.95097 3.59276 0.11661 3.49795 31 - -
11116 1.38629 1.38629 1.38629 1.38629
11117 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11118 32 2.95097 3.59276 0.11661 3.49795 32 - -
11119 1.38629 1.38629 1.38629 1.38629
11120 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11121 33 3.09359 2.59831 3.14156 0.17788 33 - -
11122 1.38629 1.38629 1.38629 1.38629
11123 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11124 34 3.09359 2.59831 3.14156 0.17788 34 - -
11125 1.38629 1.38629 1.38629 1.38629
11126 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11127 35 3.43879 0.12953 3.48801 2.83314 35 - -
11128 1.38629 1.38629 1.38629 1.38629
11129 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11130 36 0.14124 3.38520 2.80513 3.28733 36 - -
11131 1.38629 1.38629 1.38629 1.38629
11132 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11133 37 2.95097 3.59276 0.11661 3.49795 37 - -
11134 1.38629 1.38629 1.38629 1.38629
11135 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11136 38 2.95097 3.59276 0.11661 3.49795 38 - -
11137 1.38629 1.38629 1.38629 1.38629
11138 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11139 39 2.37704 2.60293 0.39274 1.84572 39 - -
11140 1.38629 1.38629 1.38629 1.38629
11141 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11142 40 3.09359 2.59831 3.14156 0.17788 40 - -
11143 1.38629 1.38629 1.38629 1.38629
11144 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11145 41 3.43879 0.12953 3.48801 2.83314 41 - -
11146 1.38629 1.38629 1.38629 1.38629
11147 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11148 42 0.14124 3.38520 2.80513 3.28733 42 - -
11149 1.38629 1.38629 1.38629 1.38629
11150 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11151 43 3.09359 2.59831 3.14156 0.17788 43 - -
11152 1.38629 1.38629 1.38629 1.38629
11153 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11154 44 0.14124 3.38520 2.80513 3.28733 44 - -
11155 1.38629 1.38629 1.38629 1.38629
11156 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547
11157 45 0.14124 3.38520 2.80513 3.28733 45 - -
11158 1.38629 1.38629 1.38629 1.38629
11159 0.01856 3.99602 * 1.46634 0.26236 0.00000 *
11160 //
11161 HMMER3/b [3.0 | March 2010]
11162 NAME 3_End_Metazoa_58S_end_fourm_long
11163 LENG 45
11164 ALPH DNA
11165 RF no
11166 CS no
11167 MAP yes
11168 DATE Sat Feb 25 14:33:27 2012
11169 NSEQ 3
11170 EFFN 3.000000
11171 CKSUM 2504187717
11172 STATS LOCAL MSV -8.1581 0.72043
11173 STATS LOCAL VITERBI -8.0441 0.72043
11174 STATS LOCAL FORWARD -4.0704 0.72043
11175 HMM A C G T
11176 m->m m->i m->d i->m i->i d->m d->d
11177 COMPO 1.71119 1.52314 1.19729 1.20627
11178 1.38629 1.38629 1.38629 1.38629
11179 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
11180 1 2.86982 3.47591 0.13017 3.36931 1 - -
11181 1.38629 1.38629 1.38629 1.38629
11182 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11183 2 3.30705 0.14631 3.36166 2.73626 2 - -
11184 1.38629 1.38629 1.38629 1.38629
11185 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11186 3 3.30705 0.14631 3.36166 2.73626 3 - -
11187 1.38629 1.38629 1.38629 1.38629
11188 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11189 4 0.15719 3.27118 2.73043 3.16274 4 - -
11190 1.38629 1.38629 1.38629 1.38629
11191 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11192 5 2.97980 2.52563 3.03204 0.19727 5 - -
11193 1.38629 1.38629 1.38629 1.38629
11194 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11195 6 2.97980 2.52563 3.03204 0.19727 6 - -
11196 1.38629 1.38629 1.38629 1.38629
11197 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11198 7 2.86982 3.47591 0.13017 3.36931 7 - -
11199 1.38629 1.38629 1.38629 1.38629
11200 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11201 8 2.86982 3.47591 0.13017 3.36931 8 - -
11202 1.38629 1.38629 1.38629 1.38629
11203 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11204 9 0.15719 3.27118 2.73043 3.16274 9 - -
11205 1.38629 1.38629 1.38629 1.38629
11206 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11207 10 2.97980 2.52563 3.03204 0.19727 10 - -
11208 1.38629 1.38629 1.38629 1.38629
11209 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11210 11 2.97980 2.52563 3.03204 0.19727 11 - -
11211 1.38629 1.38629 1.38629 1.38629
11212 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11213 12 2.97980 2.52563 3.03204 0.19727 12 - -
11214 1.38629 1.38629 1.38629 1.38629
11215 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11216 13 3.30705 0.14631 3.36166 2.73626 13 - -
11217 1.38629 1.38629 1.38629 1.38629
11218 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11219 14 2.86982 3.47591 0.13017 3.36931 14 - -
11220 1.38629 1.38629 1.38629 1.38629
11221 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11222 15 2.86982 3.47591 0.13017 3.36931 15 - -
11223 1.38629 1.38629 1.38629 1.38629
11224 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11225 16 2.97980 2.52563 3.03204 0.19727 16 - -
11226 1.38629 1.38629 1.38629 1.38629
11227 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11228 17 3.30705 0.14631 3.36166 2.73626 17 - -
11229 1.38629 1.38629 1.38629 1.38629
11230 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11231 18 3.30705 0.14631 3.36166 2.73626 18 - -
11232 1.38629 1.38629 1.38629 1.38629
11233 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11234 19 0.15719 3.27118 2.73043 3.16274 19 - -
11235 1.38629 1.38629 1.38629 1.38629
11236 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11237 20 2.97980 2.52563 3.03204 0.19727 20 - -
11238 1.38629 1.38629 1.38629 1.38629
11239 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11240 21 2.97980 2.52563 3.03204 0.19727 21 - -
11241 1.38629 1.38629 1.38629 1.38629
11242 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11243 22 2.86982 3.47591 0.13017 3.36931 22 - -
11244 1.38629 1.38629 1.38629 1.38629
11245 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11246 23 2.86982 3.47591 0.13017 3.36931 23 - -
11247 1.38629 1.38629 1.38629 1.38629
11248 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11249 24 3.30705 0.14631 3.36166 2.73626 24 - -
11250 1.38629 1.38629 1.38629 1.38629
11251 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11252 25 0.15719 3.27118 2.73043 3.16274 25 - -
11253 1.38629 1.38629 1.38629 1.38629
11254 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11255 26 3.30705 0.14631 3.36166 2.73626 26 - -
11256 1.38629 1.38629 1.38629 1.38629
11257 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11258 27 2.86982 3.47591 0.13017 3.36931 27 - -
11259 1.38629 1.38629 1.38629 1.38629
11260 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11261 28 2.97980 2.52563 3.03204 0.19727 28 - -
11262 1.38629 1.38629 1.38629 1.38629
11263 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11264 29 2.97980 2.52563 3.03204 0.19727 29 - -
11265 1.38629 1.38629 1.38629 1.38629
11266 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11267 30 2.97980 2.52563 3.03204 0.19727 30 - -
11268 1.38629 1.38629 1.38629 1.38629
11269 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11270 31 2.86982 3.47591 0.13017 3.36931 31 - -
11271 1.38629 1.38629 1.38629 1.38629
11272 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11273 32 2.86982 3.47591 0.13017 3.36931 32 - -
11274 1.38629 1.38629 1.38629 1.38629
11275 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11276 33 2.97980 2.52563 3.03204 0.19727 33 - -
11277 1.38629 1.38629 1.38629 1.38629
11278 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11279 34 2.97980 2.52563 3.03204 0.19727 34 - -
11280 1.38629 1.38629 1.38629 1.38629
11281 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11282 35 3.30705 0.14631 3.36166 2.73626 35 - -
11283 1.38629 1.38629 1.38629 1.38629
11284 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11285 36 0.15719 3.27118 2.73043 3.16274 36 - -
11286 1.38629 1.38629 1.38629 1.38629
11287 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11288 37 2.86982 3.47591 0.13017 3.36931 37 - -
11289 1.38629 1.38629 1.38629 1.38629
11290 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11291 38 2.86982 3.47591 0.13017 3.36931 38 - -
11292 1.38629 1.38629 1.38629 1.38629
11293 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11294 39 2.86982 3.47591 0.13017 3.36931 39 - -
11295 1.38629 1.38629 1.38629 1.38629
11296 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11297 40 2.97980 2.52563 3.03204 0.19727 40 - -
11298 1.38629 1.38629 1.38629 1.38629
11299 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11300 41 3.30705 0.14631 3.36166 2.73626 41 - -
11301 1.38629 1.38629 1.38629 1.38629
11302 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11303 42 2.86982 3.47591 0.13017 3.36931 42 - -
11304 1.38629 1.38629 1.38629 1.38629
11305 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11306 43 2.97980 2.52563 3.03204 0.19727 43 - -
11307 1.38629 1.38629 1.38629 1.38629
11308 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11309 44 0.15719 3.27118 2.73043 3.16274 44 - -
11310 1.38629 1.38629 1.38629 1.38629
11311 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11312 45 0.15719 3.27118 2.73043 3.16274 45 - -
11313 1.38629 1.38629 1.38629 1.38629
11314 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
11315 //
11316 HMMER3/b [3.0 | March 2010]
11317 NAME 3_End_Metazoa_58S_end_fourn_long
11318 LENG 45
11319 ALPH DNA
11320 RF no
11321 CS no
11322 MAP yes
11323 DATE Sat Feb 25 14:33:32 2012
11324 NSEQ 3
11325 EFFN 3.000000
11326 CKSUM 4061062390
11327 STATS LOCAL MSV -7.9683 0.72135
11328 STATS LOCAL VITERBI -7.9020 0.72135
11329 STATS LOCAL FORWARD -4.0040 0.72135
11330 HMM A C G T
11331 m->m m->i m->d i->m i->i d->m d->d
11332 COMPO 1.87942 1.46963 1.21765 1.13511
11333 1.38629 1.38629 1.38629 1.38629
11334 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
11335 1 2.86982 3.47591 0.13017 3.36931 1 - -
11336 1.38629 1.38629 1.38629 1.38629
11337 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11338 2 3.30705 0.14631 3.36166 2.73626 2 - -
11339 1.38629 1.38629 1.38629 1.38629
11340 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11341 3 3.30705 0.14631 3.36166 2.73626 3 - -
11342 1.38629 1.38629 1.38629 1.38629
11343 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11344 4 0.15719 3.27118 2.73043 3.16274 4 - -
11345 1.38629 1.38629 1.38629 1.38629
11346 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11347 5 2.97980 2.52563 3.03204 0.19727 5 - -
11348 1.38629 1.38629 1.38629 1.38629
11349 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11350 6 2.97980 2.52563 3.03204 0.19727 6 - -
11351 1.38629 1.38629 1.38629 1.38629
11352 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11353 7 2.86982 3.47591 0.13017 3.36931 7 - -
11354 1.38629 1.38629 1.38629 1.38629
11355 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11356 8 2.86982 3.47591 0.13017 3.36931 8 - -
11357 1.38629 1.38629 1.38629 1.38629
11358 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11359 9 0.15719 3.27118 2.73043 3.16274 9 - -
11360 1.38629 1.38629 1.38629 1.38629
11361 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11362 10 2.97980 2.52563 3.03204 0.19727 10 - -
11363 1.38629 1.38629 1.38629 1.38629
11364 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11365 11 2.97980 2.52563 3.03204 0.19727 11 - -
11366 1.38629 1.38629 1.38629 1.38629
11367 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11368 12 3.30705 0.14631 3.36166 2.73626 12 - -
11369 1.38629 1.38629 1.38629 1.38629
11370 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11371 13 3.30705 0.14631 3.36166 2.73626 13 - -
11372 1.38629 1.38629 1.38629 1.38629
11373 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11374 14 2.86982 3.47591 0.13017 3.36931 14 - -
11375 1.38629 1.38629 1.38629 1.38629
11376 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11377 15 1.35471 2.59260 0.54349 2.44834 15 - -
11378 1.38629 1.38629 1.38629 1.38629
11379 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11380 16 2.97980 2.52563 3.03204 0.19727 16 - -
11381 1.38629 1.38629 1.38629 1.38629
11382 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11383 17 3.30705 0.14631 3.36166 2.73626 17 - -
11384 1.38629 1.38629 1.38629 1.38629
11385 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11386 18 3.30705 0.14631 3.36166 2.73626 18 - -
11387 1.38629 1.38629 1.38629 1.38629
11388 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11389 19 2.97980 2.52563 3.03204 0.19727 19 - -
11390 1.38629 1.38629 1.38629 1.38629
11391 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11392 20 2.97980 2.52563 3.03204 0.19727 20 - -
11393 1.38629 1.38629 1.38629 1.38629
11394 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11395 21 2.97980 2.52563 3.03204 0.19727 21 - -
11396 1.38629 1.38629 1.38629 1.38629
11397 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11398 22 2.86982 3.47591 0.13017 3.36931 22 - -
11399 1.38629 1.38629 1.38629 1.38629
11400 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11401 23 2.86982 3.47591 0.13017 3.36931 23 - -
11402 1.38629 1.38629 1.38629 1.38629
11403 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11404 24 2.43440 0.61908 2.50724 1.22957 24 - -
11405 1.38629 1.38629 1.38629 1.38629
11406 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11407 25 0.15719 3.27118 2.73043 3.16274 25 - -
11408 1.38629 1.38629 1.38629 1.38629
11409 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11410 26 3.30705 0.14631 3.36166 2.73626 26 - -
11411 1.38629 1.38629 1.38629 1.38629
11412 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11413 27 2.86982 3.47591 0.13017 3.36931 27 - -
11414 1.38629 1.38629 1.38629 1.38629
11415 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11416 28 2.97980 2.52563 3.03204 0.19727 28 - -
11417 1.38629 1.38629 1.38629 1.38629
11418 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11419 29 2.97980 2.52563 3.03204 0.19727 29 - -
11420 1.38629 1.38629 1.38629 1.38629
11421 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11422 30 2.97980 2.52563 3.03204 0.19727 30 - -
11423 1.38629 1.38629 1.38629 1.38629
11424 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11425 31 2.86982 3.47591 0.13017 3.36931 31 - -
11426 1.38629 1.38629 1.38629 1.38629
11427 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11428 32 2.86982 3.47591 0.13017 3.36931 32 - -
11429 1.38629 1.38629 1.38629 1.38629
11430 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11431 33 2.97980 2.52563 3.03204 0.19727 33 - -
11432 1.38629 1.38629 1.38629 1.38629
11433 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11434 34 2.97980 2.52563 3.03204 0.19727 34 - -
11435 1.38629 1.38629 1.38629 1.38629
11436 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11437 35 3.30705 0.14631 3.36166 2.73626 35 - -
11438 1.38629 1.38629 1.38629 1.38629
11439 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11440 36 0.15719 3.27118 2.73043 3.16274 36 - -
11441 1.38629 1.38629 1.38629 1.38629
11442 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11443 37 2.86982 3.47591 0.13017 3.36931 37 - -
11444 1.38629 1.38629 1.38629 1.38629
11445 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11446 38 2.86982 3.47591 0.13017 3.36931 38 - -
11447 1.38629 1.38629 1.38629 1.38629
11448 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11449 39 2.86982 3.47591 0.13017 3.36931 39 - -
11450 1.38629 1.38629 1.38629 1.38629
11451 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11452 40 2.97980 2.52563 3.03204 0.19727 40 - -
11453 1.38629 1.38629 1.38629 1.38629
11454 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11455 41 3.30705 0.14631 3.36166 2.73626 41 - -
11456 1.38629 1.38629 1.38629 1.38629
11457 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11458 42 2.86982 3.47591 0.13017 3.36931 42 - -
11459 1.38629 1.38629 1.38629 1.38629
11460 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11461 43 2.97980 2.52563 3.03204 0.19727 43 - -
11462 1.38629 1.38629 1.38629 1.38629
11463 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11464 44 2.97980 2.52563 3.03204 0.19727 44 - -
11465 1.38629 1.38629 1.38629 1.38629
11466 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11467 45 0.15719 3.27118 2.73043 3.16274 45 - -
11468 1.38629 1.38629 1.38629 1.38629
11469 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
11470 //
11471 HMMER3/b [3.0 | March 2010]
11472 NAME 3_End_Metazoa_58S_end_fouro_long
11473 LENG 45
11474 ALPH DNA
11475 RF no
11476 CS no
11477 MAP yes
11478 DATE Sat Feb 25 14:33:37 2012
11479 NSEQ 2
11480 EFFN 2.000000
11481 CKSUM 1042054282
11482 STATS LOCAL MSV -7.6481 0.72791
11483 STATS LOCAL VITERBI -8.4383 0.72791
11484 STATS LOCAL FORWARD -3.5360 0.72791
11485 HMM A C G T
11486 m->m m->i m->d i->m i->i d->m d->d
11487 COMPO 1.45660 1.45908 1.26148 1.38116
11488 1.38629 1.38629 1.38629 1.38629
11489 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
11490 1 2.53331 3.02441 0.20344 2.88069 1 - -
11491 1.38629 1.38629 1.38629 1.38629
11492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11493 2 2.81865 0.23582 2.88868 2.35662 2 - -
11494 1.38629 1.38629 1.38629 1.38629
11495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11496 3 2.81865 0.23582 2.88868 2.35662 3 - -
11497 1.38629 1.38629 1.38629 1.38629
11498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11499 4 0.23862 2.84929 2.43386 2.70756 4 - -
11500 1.38629 1.38629 1.38629 1.38629
11501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11502 5 2.57915 2.25909 2.64442 0.28946 5 - -
11503 1.38629 1.38629 1.38629 1.38629
11504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11505 6 2.57915 2.25909 2.64442 0.28946 6 - -
11506 1.38629 1.38629 1.38629 1.38629
11507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11508 7 2.53331 3.02441 0.20344 2.88069 7 - -
11509 1.38629 1.38629 1.38629 1.38629
11510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11511 8 2.53331 3.02441 0.20344 2.88069 8 - -
11512 1.38629 1.38629 1.38629 1.38629
11513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11514 9 0.23862 2.84929 2.43386 2.70756 9 - -
11515 1.38629 1.38629 1.38629 1.38629
11516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11517 10 2.53331 3.02441 0.20344 2.88069 10 - -
11518 1.38629 1.38629 1.38629 1.38629
11519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11520 11 2.57915 2.25909 2.64442 0.28946 11 - -
11521 1.38629 1.38629 1.38629 1.38629
11522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11523 12 2.81865 0.23582 2.88868 2.35662 12 - -
11524 1.38629 1.38629 1.38629 1.38629
11525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11526 13 0.23862 2.84929 2.43386 2.70756 13 - -
11527 1.38629 1.38629 1.38629 1.38629
11528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11529 14 2.57915 2.25909 2.64442 0.28946 14 - -
11530 1.38629 1.38629 1.38629 1.38629
11531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11532 15 0.23862 2.84929 2.43386 2.70756 15 - -
11533 1.38629 1.38629 1.38629 1.38629
11534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11535 16 2.57915 2.25909 2.64442 0.28946 16 - -
11536 1.38629 1.38629 1.38629 1.38629
11537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11538 17 2.81865 0.23582 2.88868 2.35662 17 - -
11539 1.38629 1.38629 1.38629 1.38629
11540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11541 18 2.81865 0.23582 2.88868 2.35662 18 - -
11542 1.38629 1.38629 1.38629 1.38629
11543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11544 19 0.23862 2.84929 2.43386 2.70756 19 - -
11545 1.38629 1.38629 1.38629 1.38629
11546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11547 20 2.57915 2.25909 2.64442 0.28946 20 - -
11548 1.38629 1.38629 1.38629 1.38629
11549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11550 21 2.57915 2.25909 2.64442 0.28946 21 - -
11551 1.38629 1.38629 1.38629 1.38629
11552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11553 22 2.53331 3.02441 0.20344 2.88069 22 - -
11554 1.38629 1.38629 1.38629 1.38629
11555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11556 23 2.53331 3.02441 0.20344 2.88069 23 - -
11557 1.38629 1.38629 1.38629 1.38629
11558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11559 24 0.23862 2.84929 2.43386 2.70756 24 - -
11560 1.38629 1.38629 1.38629 1.38629
11561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11562 25 2.53331 3.02441 0.20344 2.88069 25 - -
11563 1.38629 1.38629 1.38629 1.38629
11564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11565 26 2.81865 0.23582 2.88868 2.35662 26 - -
11566 1.38629 1.38629 1.38629 1.38629
11567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11568 27 2.53331 3.02441 0.20344 2.88069 27 - -
11569 1.38629 1.38629 1.38629 1.38629
11570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11571 28 2.81865 0.23582 2.88868 2.35662 28 - -
11572 1.38629 1.38629 1.38629 1.38629
11573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11574 29 2.81865 0.23582 2.88868 2.35662 29 - -
11575 1.38629 1.38629 1.38629 1.38629
11576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11577 30 2.57915 2.25909 2.64442 0.28946 30 - -
11578 1.38629 1.38629 1.38629 1.38629
11579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11580 31 2.53331 3.02441 0.20344 2.88069 31 - -
11581 1.38629 1.38629 1.38629 1.38629
11582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11583 32 2.53331 3.02441 0.20344 2.88069 32 - -
11584 1.38629 1.38629 1.38629 1.38629
11585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11586 33 2.57915 2.25909 2.64442 0.28946 33 - -
11587 1.38629 1.38629 1.38629 1.38629
11588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11589 34 2.57915 2.25909 2.64442 0.28946 34 - -
11590 1.38629 1.38629 1.38629 1.38629
11591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11592 35 2.81865 0.23582 2.88868 2.35662 35 - -
11593 1.38629 1.38629 1.38629 1.38629
11594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11595 36 0.23862 2.84929 2.43386 2.70756 36 - -
11596 1.38629 1.38629 1.38629 1.38629
11597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11598 37 2.53331 3.02441 0.20344 2.88069 37 - -
11599 1.38629 1.38629 1.38629 1.38629
11600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11601 38 2.53331 3.02441 0.20344 2.88069 38 - -
11602 1.38629 1.38629 1.38629 1.38629
11603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11604 39 2.53331 3.02441 0.20344 2.88069 39 - -
11605 1.38629 1.38629 1.38629 1.38629
11606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11607 40 2.57915 2.25909 2.64442 0.28946 40 - -
11608 1.38629 1.38629 1.38629 1.38629
11609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11610 41 2.81865 0.23582 2.88868 2.35662 41 - -
11611 1.38629 1.38629 1.38629 1.38629
11612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11613 42 0.23862 2.84929 2.43386 2.70756 42 - -
11614 1.38629 1.38629 1.38629 1.38629
11615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11616 43 2.57915 2.25909 2.64442 0.28946 43 - -
11617 1.38629 1.38629 1.38629 1.38629
11618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11619 44 0.23862 2.84929 2.43386 2.70756 44 - -
11620 1.38629 1.38629 1.38629 1.38629
11621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11622 45 0.23862 2.84929 2.43386 2.70756 45 - -
11623 1.38629 1.38629 1.38629 1.38629
11624 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
11625 //
11626 HMMER3/b [3.0 | March 2010]
11627 NAME 3_End_Metazoa_58S_end_fourp_long
11628 LENG 45
11629 ALPH DNA
11630 RF no
11631 CS no
11632 MAP yes
11633 DATE Sat Feb 25 14:33:42 2012
11634 NSEQ 2
11635 EFFN 2.000000
11636 CKSUM 3357078393
11637 STATS LOCAL MSV -7.3153 0.72879
11638 STATS LOCAL VITERBI -8.3213 0.72879
11639 STATS LOCAL FORWARD -3.5251 0.72879
11640 HMM A C G T
11641 m->m m->i m->d i->m i->i d->m d->d
11642 COMPO 1.73799 1.30923 1.32025 1.24818
11643 1.38629 1.38629 1.38629 1.38629
11644 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
11645 1 2.53331 3.02441 0.20344 2.88069 1 - -
11646 1.38629 1.38629 1.38629 1.38629
11647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11648 2 2.81865 0.23582 2.88868 2.35662 2 - -
11649 1.38629 1.38629 1.38629 1.38629
11650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11651 3 2.81865 0.23582 2.88868 2.35662 3 - -
11652 1.38629 1.38629 1.38629 1.38629
11653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11654 4 2.57915 2.25909 2.64442 0.28946 4 - -
11655 1.38629 1.38629 1.38629 1.38629
11656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11657 5 2.57915 2.25909 2.64442 0.28946 5 - -
11658 1.38629 1.38629 1.38629 1.38629
11659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11660 6 2.15554 1.00938 2.23102 0.88601 6 - -
11661 1.38629 1.38629 1.38629 1.38629
11662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11663 7 2.53331 3.02441 0.20344 2.88069 7 - -
11664 1.38629 1.38629 1.38629 1.38629
11665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11666 8 2.53331 3.02441 0.20344 2.88069 8 - -
11667 1.38629 1.38629 1.38629 1.38629
11668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11669 9 0.23862 2.84929 2.43386 2.70756 9 - -
11670 1.38629 1.38629 1.38629 1.38629
11671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11672 10 2.57915 2.25909 2.64442 0.28946 10 - -
11673 1.38629 1.38629 1.38629 1.38629
11674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11675 11 2.57915 2.25909 2.64442 0.28946 11 - -
11676 1.38629 1.38629 1.38629 1.38629
11677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11678 12 2.81865 0.23582 2.88868 2.35662 12 - -
11679 1.38629 1.38629 1.38629 1.38629
11680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11681 13 0.23862 2.84929 2.43386 2.70756 13 - -
11682 1.38629 1.38629 1.38629 1.38629
11683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11684 14 2.81865 0.23582 2.88868 2.35662 14 - -
11685 1.38629 1.38629 1.38629 1.38629
11686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11687 15 0.23862 2.84929 2.43386 2.70756 15 - -
11688 1.38629 1.38629 1.38629 1.38629
11689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11690 16 2.57915 2.25909 2.64442 0.28946 16 - -
11691 1.38629 1.38629 1.38629 1.38629
11692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11693 17 2.81865 0.23582 2.88868 2.35662 17 - -
11694 1.38629 1.38629 1.38629 1.38629
11695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11696 18 2.81865 0.23582 2.88868 2.35662 18 - -
11697 1.38629 1.38629 1.38629 1.38629
11698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11699 19 2.57915 2.25909 2.64442 0.28946 19 - -
11700 1.38629 1.38629 1.38629 1.38629
11701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11702 20 2.81865 0.23582 2.88868 2.35662 20 - -
11703 1.38629 1.38629 1.38629 1.38629
11704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11705 21 2.57915 2.25909 2.64442 0.28946 21 - -
11706 1.38629 1.38629 1.38629 1.38629
11707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11708 22 2.53331 3.02441 0.20344 2.88069 22 - -
11709 1.38629 1.38629 1.38629 1.38629
11710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11711 23 2.53331 3.02441 0.20344 2.88069 23 - -
11712 1.38629 1.38629 1.38629 1.38629
11713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11714 24 2.81865 0.23582 2.88868 2.35662 24 - -
11715 1.38629 1.38629 1.38629 1.38629
11716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11717 25 0.23862 2.84929 2.43386 2.70756 25 - -
11718 1.38629 1.38629 1.38629 1.38629
11719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11720 26 2.81865 0.23582 2.88868 2.35662 26 - -
11721 1.38629 1.38629 1.38629 1.38629
11722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11723 27 2.53331 3.02441 0.20344 2.88069 27 - -
11724 1.38629 1.38629 1.38629 1.38629
11725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11726 28 2.57915 2.25909 2.64442 0.28946 28 - -
11727 1.38629 1.38629 1.38629 1.38629
11728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11729 29 2.81865 0.23582 2.88868 2.35662 29 - -
11730 1.38629 1.38629 1.38629 1.38629
11731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11732 30 2.57915 2.25909 2.64442 0.28946 30 - -
11733 1.38629 1.38629 1.38629 1.38629
11734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11735 31 2.53331 3.02441 0.20344 2.88069 31 - -
11736 1.38629 1.38629 1.38629 1.38629
11737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11738 32 2.53331 3.02441 0.20344 2.88069 32 - -
11739 1.38629 1.38629 1.38629 1.38629
11740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11741 33 2.57915 2.25909 2.64442 0.28946 33 - -
11742 1.38629 1.38629 1.38629 1.38629
11743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11744 34 2.57915 2.25909 2.64442 0.28946 34 - -
11745 1.38629 1.38629 1.38629 1.38629
11746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11747 35 2.81865 0.23582 2.88868 2.35662 35 - -
11748 1.38629 1.38629 1.38629 1.38629
11749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11750 36 0.23862 2.84929 2.43386 2.70756 36 - -
11751 1.38629 1.38629 1.38629 1.38629
11752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11753 37 2.53331 3.02441 0.20344 2.88069 37 - -
11754 1.38629 1.38629 1.38629 1.38629
11755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11756 38 2.53331 3.02441 0.20344 2.88069 38 - -
11757 1.38629 1.38629 1.38629 1.38629
11758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11759 39 2.53331 3.02441 0.20344 2.88069 39 - -
11760 1.38629 1.38629 1.38629 1.38629
11761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11762 40 2.57915 2.25909 2.64442 0.28946 40 - -
11763 1.38629 1.38629 1.38629 1.38629
11764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11765 41 2.81865 0.23582 2.88868 2.35662 41 - -
11766 1.38629 1.38629 1.38629 1.38629
11767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11768 42 2.53331 3.02441 0.20344 2.88069 42 - -
11769 1.38629 1.38629 1.38629 1.38629
11770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11771 43 2.57915 2.25909 2.64442 0.28946 43 - -
11772 1.38629 1.38629 1.38629 1.38629
11773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11774 44 2.57915 2.25909 2.64442 0.28946 44 - -
11775 1.38629 1.38629 1.38629 1.38629
11776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11777 45 0.23862 2.84929 2.43386 2.70756 45 - -
11778 1.38629 1.38629 1.38629 1.38629
11779 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
11780 //
11781 HMMER3/b [3.0 | March 2010]
11782 NAME 3_End_Metazoa_58S_end_fourq_long
11783 LENG 45
11784 ALPH DNA
11785 RF no
11786 CS no
11787 MAP yes
11788 DATE Sat Feb 25 14:33:47 2012
11789 NSEQ 4
11790 EFFN 3.324219
11791 CKSUM 3293610726
11792 STATS LOCAL MSV -7.9677 0.71933
11793 STATS LOCAL VITERBI -7.8423 0.71933
11794 STATS LOCAL FORWARD -4.3589 0.71933
11795 HMM A C G T
11796 m->m m->i m->d i->m i->i d->m d->d
11797 COMPO 1.63635 1.44298 1.38451 1.14368
11798 1.38629 1.38629 1.38629 1.38629
11799 0.03688 4.01173 4.01173 1.46634 0.26236 0.00000 *
11800 1 3.43368 0.13014 3.48311 2.82941 1 - -
11801 1.38629 1.38629 1.38629 1.38629
11802 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11803 2 2.94787 3.58826 0.11710 3.49298 2 - -
11804 1.38629 1.38629 1.38629 1.38629
11805 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11806 3 3.43368 0.13014 3.48311 2.82941 3 - -
11807 1.38629 1.38629 1.38629 1.38629
11808 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11809 4 3.43368 0.13014 3.48311 2.82941 4 - -
11810 1.38629 1.38629 1.38629 1.38629
11811 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11812 5 0.14183 3.38076 2.80224 3.28247 5 - -
11813 1.38629 1.38629 1.38629 1.38629
11814 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11815 6 3.08911 2.59546 3.13724 0.17860 6 - -
11816 1.38629 1.38629 1.38629 1.38629
11817 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11818 7 3.08911 2.59546 3.13724 0.17860 7 - -
11819 1.38629 1.38629 1.38629 1.38629
11820 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11821 8 2.94787 3.58826 0.11710 3.49298 8 - -
11822 1.38629 1.38629 1.38629 1.38629
11823 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11824 9 2.94787 3.58826 0.11710 3.49298 9 - -
11825 1.38629 1.38629 1.38629 1.38629
11826 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11827 10 0.14183 3.38076 2.80224 3.28247 10 - -
11828 1.38629 1.38629 1.38629 1.38629
11829 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11830 11 3.08911 2.59546 3.13724 0.17860 11 - -
11831 1.38629 1.38629 1.38629 1.38629
11832 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11833 12 3.08911 2.59546 3.13724 0.17860 12 - -
11834 1.38629 1.38629 1.38629 1.38629
11835 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11836 13 3.08911 2.59546 3.13724 0.17860 13 - -
11837 1.38629 1.38629 1.38629 1.38629
11838 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11839 14 3.08911 2.59546 3.13724 0.17860 14 - -
11840 1.38629 1.38629 1.38629 1.38629
11841 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11842 15 0.14183 3.38076 2.80224 3.28247 15 - -
11843 1.38629 1.38629 1.38629 1.38629
11844 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11845 16 3.08911 2.59546 3.13724 0.17860 16 - -
11846 1.38629 1.38629 1.38629 1.38629
11847 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11848 17 3.43368 0.13014 3.48311 2.82941 17 - -
11849 1.38629 1.38629 1.38629 1.38629
11850 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11851 18 3.43368 0.13014 3.48311 2.82941 18 - -
11852 1.38629 1.38629 1.38629 1.38629
11853 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11854 19 3.08911 2.59546 3.13724 0.17860 19 - -
11855 1.38629 1.38629 1.38629 1.38629
11856 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11857 20 3.08911 2.59546 3.13724 0.17860 20 - -
11858 1.38629 1.38629 1.38629 1.38629
11859 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11860 21 3.08911 2.59546 3.13724 0.17860 21 - -
11861 1.38629 1.38629 1.38629 1.38629
11862 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11863 22 2.94787 3.58826 0.11710 3.49298 22 - -
11864 1.38629 1.38629 1.38629 1.38629
11865 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11866 23 2.94787 3.58826 0.11710 3.49298 23 - -
11867 1.38629 1.38629 1.38629 1.38629
11868 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11869 24 3.43368 0.13014 3.48311 2.82941 24 - -
11870 1.38629 1.38629 1.38629 1.38629
11871 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11872 25 0.14183 3.38076 2.80224 3.28247 25 - -
11873 1.38629 1.38629 1.38629 1.38629
11874 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11875 26 3.43368 0.13014 3.48311 2.82941 26 - -
11876 1.38629 1.38629 1.38629 1.38629
11877 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11878 27 2.94787 3.58826 0.11710 3.49298 27 - -
11879 1.38629 1.38629 1.38629 1.38629
11880 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11881 28 3.08911 2.59546 3.13724 0.17860 28 - -
11882 1.38629 1.38629 1.38629 1.38629
11883 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11884 29 3.43368 0.13014 3.48311 2.82941 29 - -
11885 1.38629 1.38629 1.38629 1.38629
11886 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11887 30 3.08911 2.59546 3.13724 0.17860 30 - -
11888 1.38629 1.38629 1.38629 1.38629
11889 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11890 31 2.94787 3.58826 0.11710 3.49298 31 - -
11891 1.38629 1.38629 1.38629 1.38629
11892 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11893 32 0.14183 3.38076 2.80224 3.28247 32 - -
11894 1.38629 1.38629 1.38629 1.38629
11895 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11896 33 3.08911 2.59546 3.13724 0.17860 33 - -
11897 1.38629 1.38629 1.38629 1.38629
11898 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11899 34 3.08911 2.59546 3.13724 0.17860 34 - -
11900 1.38629 1.38629 1.38629 1.38629
11901 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11902 35 3.43368 0.13014 3.48311 2.82941 35 - -
11903 1.38629 1.38629 1.38629 1.38629
11904 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11905 36 0.14183 3.38076 2.80224 3.28247 36 - -
11906 1.38629 1.38629 1.38629 1.38629
11907 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11908 37 2.94787 3.58826 0.11710 3.49298 37 - -
11909 1.38629 1.38629 1.38629 1.38629
11910 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11911 38 2.94787 3.58826 0.11710 3.49298 38 - -
11912 1.38629 1.38629 1.38629 1.38629
11913 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11914 39 2.94787 3.58826 0.11710 3.49298 39 - -
11915 1.38629 1.38629 1.38629 1.38629
11916 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11917 40 3.08911 2.59546 3.13724 0.17860 40 - -
11918 1.38629 1.38629 1.38629 1.38629
11919 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11920 41 3.43368 0.13014 3.48311 2.82941 41 - -
11921 1.38629 1.38629 1.38629 1.38629
11922 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11923 42 2.94787 3.58826 0.11710 3.49298 42 - -
11924 1.38629 1.38629 1.38629 1.38629
11925 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11926 43 3.08911 2.59546 3.13724 0.17860 43 - -
11927 1.38629 1.38629 1.38629 1.38629
11928 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11929 44 0.14183 3.38076 2.80224 3.28247 44 - -
11930 1.38629 1.38629 1.38629 1.38629
11931 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
11932 45 0.14183 3.38076 2.80224 3.28247 45 - -
11933 1.38629 1.38629 1.38629 1.38629
11934 0.01861 3.99346 * 1.46634 0.26236 0.00000 *
11935 //
11936 HMMER3/b [3.0 | March 2010]
11937 NAME 3_End_Metazoa_58S_end_fourr_long
11938 LENG 45
11939 ALPH DNA
11940 RF no
11941 CS no
11942 MAP yes
11943 DATE Sat Feb 25 14:33:52 2012
11944 NSEQ 3
11945 EFFN 3.000000
11946 CKSUM 865624913
11947 STATS LOCAL MSV -8.0392 0.72080
11948 STATS LOCAL VITERBI -7.7818 0.72080
11949 STATS LOCAL FORWARD -4.1310 0.72080
11950 HMM A C G T
11951 m->m m->i m->d i->m i->i d->m d->d
11952 COMPO 1.54500 1.36606 1.37837 1.27443
11953 1.38629 1.38629 1.38629 1.38629
11954 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
11955 1 2.86982 3.47591 0.13017 3.36931 1 - -
11956 1.38629 1.38629 1.38629 1.38629
11957 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11958 2 3.30705 0.14631 3.36166 2.73626 2 - -
11959 1.38629 1.38629 1.38629 1.38629
11960 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11961 3 3.30705 0.14631 3.36166 2.73626 3 - -
11962 1.38629 1.38629 1.38629 1.38629
11963 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11964 4 0.15719 3.27118 2.73043 3.16274 4 - -
11965 1.38629 1.38629 1.38629 1.38629
11966 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11967 5 3.30705 0.14631 3.36166 2.73626 5 - -
11968 1.38629 1.38629 1.38629 1.38629
11969 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11970 6 2.97980 2.52563 3.03204 0.19727 6 - -
11971 1.38629 1.38629 1.38629 1.38629
11972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11973 7 2.86982 3.47591 0.13017 3.36931 7 - -
11974 1.38629 1.38629 1.38629 1.38629
11975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11976 8 2.86982 3.47591 0.13017 3.36931 8 - -
11977 1.38629 1.38629 1.38629 1.38629
11978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11979 9 0.15719 3.27118 2.73043 3.16274 9 - -
11980 1.38629 1.38629 1.38629 1.38629
11981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11982 10 2.97980 2.52563 3.03204 0.19727 10 - -
11983 1.38629 1.38629 1.38629 1.38629
11984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11985 11 0.15719 3.27118 2.73043 3.16274 11 - -
11986 1.38629 1.38629 1.38629 1.38629
11987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11988 12 2.97980 2.52563 3.03204 0.19727 12 - -
11989 1.38629 1.38629 1.38629 1.38629
11990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11991 13 2.43088 1.34923 2.50068 0.56112 13 - -
11992 1.38629 1.38629 1.38629 1.38629
11993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11994 14 2.97980 2.52563 3.03204 0.19727 14 - -
11995 1.38629 1.38629 1.38629 1.38629
11996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11997 15 0.15719 3.27118 2.73043 3.16274 15 - -
11998 1.38629 1.38629 1.38629 1.38629
11999 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12000 16 2.97980 2.52563 3.03204 0.19727 16 - -
12001 1.38629 1.38629 1.38629 1.38629
12002 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12003 17 3.30705 0.14631 3.36166 2.73626 17 - -
12004 1.38629 1.38629 1.38629 1.38629
12005 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12006 18 3.30705 0.14631 3.36166 2.73626 18 - -
12007 1.38629 1.38629 1.38629 1.38629
12008 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12009 19 2.97980 2.52563 3.03204 0.19727 19 - -
12010 1.38629 1.38629 1.38629 1.38629
12011 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12012 20 2.97980 2.52563 3.03204 0.19727 20 - -
12013 1.38629 1.38629 1.38629 1.38629
12014 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12015 21 2.97980 2.52563 3.03204 0.19727 21 - -
12016 1.38629 1.38629 1.38629 1.38629
12017 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12018 22 2.86982 3.47591 0.13017 3.36931 22 - -
12019 1.38629 1.38629 1.38629 1.38629
12020 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12021 23 2.86982 3.47591 0.13017 3.36931 23 - -
12022 1.38629 1.38629 1.38629 1.38629
12023 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12024 24 3.30705 0.14631 3.36166 2.73626 24 - -
12025 1.38629 1.38629 1.38629 1.38629
12026 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12027 25 0.15719 3.27118 2.73043 3.16274 25 - -
12028 1.38629 1.38629 1.38629 1.38629
12029 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12030 26 3.30705 0.14631 3.36166 2.73626 26 - -
12031 1.38629 1.38629 1.38629 1.38629
12032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12033 27 0.15719 3.27118 2.73043 3.16274 27 - -
12034 1.38629 1.38629 1.38629 1.38629
12035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12036 28 2.97980 2.52563 3.03204 0.19727 28 - -
12037 1.38629 1.38629 1.38629 1.38629
12038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12039 29 3.30705 0.14631 3.36166 2.73626 29 - -
12040 1.38629 1.38629 1.38629 1.38629
12041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12042 30 2.97980 2.52563 3.03204 0.19727 30 - -
12043 1.38629 1.38629 1.38629 1.38629
12044 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12045 31 2.86982 3.47591 0.13017 3.36931 31 - -
12046 1.38629 1.38629 1.38629 1.38629
12047 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12048 32 2.86982 3.47591 0.13017 3.36931 32 - -
12049 1.38629 1.38629 1.38629 1.38629
12050 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12051 33 3.30705 0.14631 3.36166 2.73626 33 - -
12052 1.38629 1.38629 1.38629 1.38629
12053 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12054 34 2.97980 2.52563 3.03204 0.19727 34 - -
12055 1.38629 1.38629 1.38629 1.38629
12056 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12057 35 3.30705 0.14631 3.36166 2.73626 35 - -
12058 1.38629 1.38629 1.38629 1.38629
12059 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12060 36 0.15719 3.27118 2.73043 3.16274 36 - -
12061 1.38629 1.38629 1.38629 1.38629
12062 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12063 37 2.86982 3.47591 0.13017 3.36931 37 - -
12064 1.38629 1.38629 1.38629 1.38629
12065 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12066 38 2.86982 3.47591 0.13017 3.36931 38 - -
12067 1.38629 1.38629 1.38629 1.38629
12068 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12069 39 2.86982 3.47591 0.13017 3.36931 39 - -
12070 1.38629 1.38629 1.38629 1.38629
12071 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12072 40 2.97980 2.52563 3.03204 0.19727 40 - -
12073 1.38629 1.38629 1.38629 1.38629
12074 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12075 41 3.30705 0.14631 3.36166 2.73626 41 - -
12076 1.38629 1.38629 1.38629 1.38629
12077 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12078 42 2.86982 3.47591 0.13017 3.36931 42 - -
12079 1.38629 1.38629 1.38629 1.38629
12080 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12081 43 2.97980 2.52563 3.03204 0.19727 43 - -
12082 1.38629 1.38629 1.38629 1.38629
12083 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12084 44 0.15719 3.27118 2.73043 3.16274 44 - -
12085 1.38629 1.38629 1.38629 1.38629
12086 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12087 45 0.15719 3.27118 2.73043 3.16274 45 - -
12088 1.38629 1.38629 1.38629 1.38629
12089 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
12090 //
12091 HMMER3/b [3.0 | March 2010]
12092 NAME 3_End_Metazoa_58S_end_fours_long
12093 LENG 45
12094 ALPH DNA
12095 RF no
12096 CS no
12097 MAP yes
12098 DATE Sat Feb 25 14:33:57 2012
12099 NSEQ 6
12100 EFFN 3.454102
12101 CKSUM 1542454552
12102 STATS LOCAL MSV -7.5502 0.71932
12103 STATS LOCAL VITERBI -7.9280 0.71932
12104 STATS LOCAL FORWARD -4.1162 0.71932
12105 HMM A C G T
12106 m->m m->i m->d i->m i->i d->m d->d
12107 COMPO 1.91213 1.23481 1.25281 1.28865
12108 1.38629 1.38629 1.38629 1.38629
12109 0.03601 4.03497 4.03497 1.46634 0.26236 0.00000 *
12110 1 2.97603 3.62936 0.11271 3.53839 1 - -
12111 1.38629 1.38629 1.38629 1.38629
12112 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12113 2 3.48048 0.12470 3.52791 2.86336 2 - -
12114 1.38629 1.38629 1.38629 1.38629
12115 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12116 3 3.48048 0.12470 3.52791 2.86336 3 - -
12117 1.38629 1.38629 1.38629 1.38629
12118 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12119 4 3.13036 2.62167 3.17691 0.17209 4 - -
12120 1.38629 1.38629 1.38629 1.38629
12121 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12122 5 3.13036 2.62167 3.17691 0.17209 5 - -
12123 1.38629 1.38629 1.38629 1.38629
12124 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12125 6 2.97603 3.62936 0.11271 3.53839 6 - -
12126 1.38629 1.38629 1.38629 1.38629
12127 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12128 7 2.97603 3.62936 0.11271 3.53839 7 - -
12129 1.38629 1.38629 1.38629 1.38629
12130 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12131 8 2.97603 3.62936 0.11271 3.53839 8 - -
12132 1.38629 1.38629 1.38629 1.38629
12133 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12134 9 0.13658 3.42143 2.82860 3.32702 9 - -
12135 1.38629 1.38629 1.38629 1.38629
12136 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12137 10 2.53075 1.35523 2.59881 0.53077 10 - -
12138 1.38629 1.38629 1.38629 1.38629
12139 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12140 11 3.48048 0.12470 3.52791 2.86336 11 - -
12141 1.38629 1.38629 1.38629 1.38629
12142 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12143 12 3.13036 2.62167 3.17691 0.17209 12 - -
12144 1.38629 1.38629 1.38629 1.38629
12145 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12146 13 0.13658 3.42143 2.82860 3.32702 13 - -
12147 1.38629 1.38629 1.38629 1.38629
12148 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12149 14 3.48048 0.12470 3.52791 2.86336 14 - -
12150 1.38629 1.38629 1.38629 1.38629
12151 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12152 15 0.13658 3.42143 2.82860 3.32702 15 - -
12153 1.38629 1.38629 1.38629 1.38629
12154 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12155 16 3.13036 2.62167 3.17691 0.17209 16 - -
12156 1.38629 1.38629 1.38629 1.38629
12157 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12158 17 3.48048 0.12470 3.52791 2.86336 17 - -
12159 1.38629 1.38629 1.38629 1.38629
12160 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12161 18 3.48048 0.12470 3.52791 2.86336 18 - -
12162 1.38629 1.38629 1.38629 1.38629
12163 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12164 19 3.48048 0.12470 3.52791 2.86336 19 - -
12165 1.38629 1.38629 1.38629 1.38629
12166 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12167 20 3.13036 2.62167 3.17691 0.17209 20 - -
12168 1.38629 1.38629 1.38629 1.38629
12169 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12170 21 3.13036 2.62167 3.17691 0.17209 21 - -
12171 1.38629 1.38629 1.38629 1.38629
12172 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12173 22 2.97603 3.62936 0.11271 3.53839 22 - -
12174 1.38629 1.38629 1.38629 1.38629
12175 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12176 23 2.97603 3.62936 0.11271 3.53839 23 - -
12177 1.38629 1.38629 1.38629 1.38629
12178 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12179 24 3.48048 0.12470 3.52791 2.86336 24 - -
12180 1.38629 1.38629 1.38629 1.38629
12181 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12182 25 0.13658 3.42143 2.82860 3.32702 25 - -
12183 1.38629 1.38629 1.38629 1.38629
12184 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12185 26 3.48048 0.12470 3.52791 2.86336 26 - -
12186 1.38629 1.38629 1.38629 1.38629
12187 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12188 27 2.97603 3.62936 0.11271 3.53839 27 - -
12189 1.38629 1.38629 1.38629 1.38629
12190 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12191 28 3.48048 0.12470 3.52791 2.86336 28 - -
12192 1.38629 1.38629 1.38629 1.38629
12193 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12194 29 3.48048 0.12470 3.52791 2.86336 29 - -
12195 1.38629 1.38629 1.38629 1.38629
12196 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12197 30 3.13036 2.62167 3.17691 0.17209 30 - -
12198 1.38629 1.38629 1.38629 1.38629
12199 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12200 31 2.97603 3.62936 0.11271 3.53839 31 - -
12201 1.38629 1.38629 1.38629 1.38629
12202 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12203 32 2.97603 3.62936 0.11271 3.53839 32 - -
12204 1.38629 1.38629 1.38629 1.38629
12205 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12206 33 3.13036 2.62167 3.17691 0.17209 33 - -
12207 1.38629 1.38629 1.38629 1.38629
12208 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12209 34 3.13036 2.62167 3.17691 0.17209 34 - -
12210 1.38629 1.38629 1.38629 1.38629
12211 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12212 35 3.48048 0.12470 3.52791 2.86336 35 - -
12213 1.38629 1.38629 1.38629 1.38629
12214 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12215 36 0.13658 3.42143 2.82860 3.32702 36 - -
12216 1.38629 1.38629 1.38629 1.38629
12217 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12218 37 2.97603 3.62936 0.11271 3.53839 37 - -
12219 1.38629 1.38629 1.38629 1.38629
12220 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12221 38 2.97603 3.62936 0.11271 3.53839 38 - -
12222 1.38629 1.38629 1.38629 1.38629
12223 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12224 39 2.97603 3.62936 0.11271 3.53839 39 - -
12225 1.38629 1.38629 1.38629 1.38629
12226 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12227 40 3.13036 2.62167 3.17691 0.17209 40 - -
12228 1.38629 1.38629 1.38629 1.38629
12229 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12230 41 3.48048 0.12470 3.52791 2.86336 41 - -
12231 1.38629 1.38629 1.38629 1.38629
12232 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12233 42 2.97603 3.62936 0.11271 3.53839 42 - -
12234 1.38629 1.38629 1.38629 1.38629
12235 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12236 43 3.13036 2.62167 3.17691 0.17209 43 - -
12237 1.38629 1.38629 1.38629 1.38629
12238 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12239 44 1.31680 2.17756 2.25927 0.66502 44 - -
12240 1.38629 1.38629 1.38629 1.38629
12241 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547
12242 45 3.13036 2.62167 3.17691 0.17209 45 - -
12243 1.38629 1.38629 1.38629 1.38629
12244 0.01817 4.01712 * 1.46634 0.26236 0.00000 *
12245 //
12246 HMMER3/b [3.0 | March 2010]
12247 NAME 3_End_Metazoa_58S_end_fourt_long
12248 LENG 45
12249 ALPH DNA
12250 RF no
12251 CS no
12252 MAP yes
12253 DATE Sat Feb 25 14:34:02 2012
12254 NSEQ 6
12255 EFFN 3.225586
12256 CKSUM 1438411373
12257 STATS LOCAL MSV -8.1763 0.71932
12258 STATS LOCAL VITERBI -7.7716 0.71932
12259 STATS LOCAL FORWARD -3.7753 0.71932
12260 HMM A C G T
12261 m->m m->i m->d i->m i->i d->m d->d
12262 COMPO 1.72081 1.45719 1.14065 1.31462
12263 1.38629 1.38629 1.38629 1.38629
12264 0.03756 3.99371 3.99371 1.46634 0.26236 0.00000 *
12265 1 2.92536 3.55560 0.12074 3.45696 1 - -
12266 1.38629 1.38629 1.38629 1.38629
12267 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12268 2 3.39667 0.13464 3.44765 2.80239 2 - -
12269 1.38629 1.38629 1.38629 1.38629
12270 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12271 3 3.39667 0.13464 3.44765 2.80239 3 - -
12272 1.38629 1.38629 1.38629 1.38629
12273 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12274 4 3.05683 2.57491 3.10619 0.18389 4 - -
12275 1.38629 1.38629 1.38629 1.38629
12276 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12277 5 2.92536 3.55560 0.12074 3.45696 5 - -
12278 1.38629 1.38629 1.38629 1.38629
12279 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12280 6 0.14614 3.34867 2.78135 3.24736 6 - -
12281 1.38629 1.38629 1.38629 1.38629
12282 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12283 7 2.92536 3.55560 0.12074 3.45696 7 - -
12284 1.38629 1.38629 1.38629 1.38629
12285 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12286 8 2.92536 3.55560 0.12074 3.45696 8 - -
12287 1.38629 1.38629 1.38629 1.38629
12288 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12289 9 3.05683 2.57491 3.10619 0.18389 9 - -
12290 1.38629 1.38629 1.38629 1.38629
12291 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12292 10 2.92536 3.55560 0.12074 3.45696 10 - -
12293 1.38629 1.38629 1.38629 1.38629
12294 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12295 11 3.05683 2.57491 3.10619 0.18389 11 - -
12296 1.38629 1.38629 1.38629 1.38629
12297 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12298 12 3.05683 2.57491 3.10619 0.18389 12 - -
12299 1.38629 1.38629 1.38629 1.38629
12300 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12301 13 0.14614 3.34867 2.78135 3.24736 13 - -
12302 1.38629 1.38629 1.38629 1.38629
12303 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12304 14 0.14614 3.34867 2.78135 3.24736 14 - -
12305 1.38629 1.38629 1.38629 1.38629
12306 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12307 15 0.14614 3.34867 2.78135 3.24736 15 - -
12308 1.38629 1.38629 1.38629 1.38629
12309 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12310 16 3.05683 2.57491 3.10619 0.18389 16 - -
12311 1.38629 1.38629 1.38629 1.38629
12312 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12313 17 3.39667 0.13464 3.44765 2.80239 17 - -
12314 1.38629 1.38629 1.38629 1.38629
12315 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12316 18 3.39667 0.13464 3.44765 2.80239 18 - -
12317 1.38629 1.38629 1.38629 1.38629
12318 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12319 19 3.05683 2.57491 3.10619 0.18389 19 - -
12320 1.38629 1.38629 1.38629 1.38629
12321 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12322 20 3.39667 0.13464 3.44765 2.80239 20 - -
12323 1.38629 1.38629 1.38629 1.38629
12324 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12325 21 3.05683 2.57491 3.10619 0.18389 21 - -
12326 1.38629 1.38629 1.38629 1.38629
12327 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12328 22 2.92536 3.55560 0.12074 3.45696 22 - -
12329 1.38629 1.38629 1.38629 1.38629
12330 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12331 23 2.92536 3.55560 0.12074 3.45696 23 - -
12332 1.38629 1.38629 1.38629 1.38629
12333 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12334 24 3.39667 0.13464 3.44765 2.80239 24 - -
12335 1.38629 1.38629 1.38629 1.38629
12336 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12337 25 0.14614 3.34867 2.78135 3.24736 25 - -
12338 1.38629 1.38629 1.38629 1.38629
12339 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12340 26 3.39667 0.13464 3.44765 2.80239 26 - -
12341 1.38629 1.38629 1.38629 1.38629
12342 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12343 27 2.92536 3.55560 0.12074 3.45696 27 - -
12344 1.38629 1.38629 1.38629 1.38629
12345 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12346 28 2.92536 3.55560 0.12074 3.45696 28 - -
12347 1.38629 1.38629 1.38629 1.38629
12348 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12349 29 3.39667 0.13464 3.44765 2.80239 29 - -
12350 1.38629 1.38629 1.38629 1.38629
12351 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12352 30 3.05683 2.57491 3.10619 0.18389 30 - -
12353 1.38629 1.38629 1.38629 1.38629
12354 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12355 31 2.92536 3.55560 0.12074 3.45696 31 - -
12356 1.38629 1.38629 1.38629 1.38629
12357 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12358 32 2.92536 3.55560 0.12074 3.45696 32 - -
12359 1.38629 1.38629 1.38629 1.38629
12360 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12361 33 3.05683 2.57491 3.10619 0.18389 33 - -
12362 1.38629 1.38629 1.38629 1.38629
12363 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12364 34 3.05683 2.57491 3.10619 0.18389 34 - -
12365 1.38629 1.38629 1.38629 1.38629
12366 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12367 35 3.39667 0.13464 3.44765 2.80239 35 - -
12368 1.38629 1.38629 1.38629 1.38629
12369 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12370 36 0.14614 3.34867 2.78135 3.24736 36 - -
12371 1.38629 1.38629 1.38629 1.38629
12372 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12373 37 2.92536 3.55560 0.12074 3.45696 37 - -
12374 1.38629 1.38629 1.38629 1.38629
12375 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12376 38 2.92536 3.55560 0.12074 3.45696 38 - -
12377 1.38629 1.38629 1.38629 1.38629
12378 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12379 39 2.92536 3.55560 0.12074 3.45696 39 - -
12380 1.38629 1.38629 1.38629 1.38629
12381 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12382 40 3.05683 2.57491 3.10619 0.18389 40 - -
12383 1.38629 1.38629 1.38629 1.38629
12384 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12385 41 3.39667 0.13464 3.44765 2.80239 41 - -
12386 1.38629 1.38629 1.38629 1.38629
12387 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12388 42 2.92536 3.55560 0.12074 3.45696 42 - -
12389 1.38629 1.38629 1.38629 1.38629
12390 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12391 43 3.05683 2.57491 3.10619 0.18389 43 - -
12392 1.38629 1.38629 1.38629 1.38629
12393 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12394 44 3.05683 2.57491 3.10619 0.18389 44 - -
12395 1.38629 1.38629 1.38629 1.38629
12396 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
12397 45 0.14614 3.34867 2.78135 3.24736 45 - -
12398 1.38629 1.38629 1.38629 1.38629
12399 0.01896 3.97511 * 1.46634 0.26236 0.00000 *
12400 //
12401 HMMER3/b [3.0 | March 2010]
12402 NAME 3_End_Metazoa_58S_end_fourteen_long
12403 LENG 45
12404 ALPH DNA
12405 RF no
12406 CS no
12407 MAP yes
12408 DATE Sat Feb 25 14:38:24 2012
12409 NSEQ 13
12410 EFFN 3.526123
12411 CKSUM 2258401781
12412 STATS LOCAL MSV -7.2688 0.71933
12413 STATS LOCAL VITERBI -7.6651 0.71933
12414 STATS LOCAL FORWARD -4.0404 0.71933
12415 HMM A C G T
12416 m->m m->i m->d i->m i->i d->m d->d
12417 COMPO 1.36154 2.16683 1.28426 1.04316
12418 1.38629 1.38629 1.38629 1.38629
12419 0.03555 4.04762 4.04762 1.46634 0.26236 0.00000 *
12420 1 3.15264 2.63580 3.19832 0.16869 1 - -
12421 1.38629 1.38629 1.38629 1.38629
12422 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12423 2 0.13385 3.44324 2.84268 3.35093 2 - -
12424 1.38629 1.38629 1.38629 1.38629
12425 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12426 3 3.15264 2.63580 3.19832 0.16869 3 - -
12427 1.38629 1.38629 1.38629 1.38629
12428 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12429 4 3.15264 2.63580 3.19832 0.16869 4 - -
12430 1.38629 1.38629 1.38629 1.38629
12431 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12432 5 3.15264 2.63580 3.19832 0.16869 5 - -
12433 1.38629 1.38629 1.38629 1.38629
12434 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12435 6 0.13385 3.44324 2.84268 3.35093 6 - -
12436 1.38629 1.38629 1.38629 1.38629
12437 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12438 7 2.99096 3.65126 0.11044 3.56262 7 - -
12439 1.38629 1.38629 1.38629 1.38629
12440 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12441 8 3.15264 2.63580 3.19832 0.16869 8 - -
12442 1.38629 1.38629 1.38629 1.38629
12443 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12444 9 3.15264 2.63580 3.19832 0.16869 9 - -
12445 1.38629 1.38629 1.38629 1.38629
12446 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12447 10 0.13385 3.44324 2.84268 3.35093 10 - -
12448 1.38629 1.38629 1.38629 1.38629
12449 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12450 11 2.99096 3.65126 0.11044 3.56262 11 - -
12451 1.38629 1.38629 1.38629 1.38629
12452 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12453 12 0.75959 2.55517 1.00847 2.41146 12 - -
12454 1.38629 1.38629 1.38629 1.38629
12455 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12456 13 0.13385 3.44324 2.84268 3.35093 13 - -
12457 1.38629 1.38629 1.38629 1.38629
12458 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12459 14 3.15264 2.63580 3.19832 0.16869 14 - -
12460 1.38629 1.38629 1.38629 1.38629
12461 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12462 15 2.99096 3.65126 0.11044 3.56262 15 - -
12463 1.38629 1.38629 1.38629 1.38629
12464 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12465 16 2.99096 3.65126 0.11044 3.56262 16 - -
12466 1.38629 1.38629 1.38629 1.38629
12467 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12468 17 3.50552 0.12189 3.55185 2.88142 17 - -
12469 1.38629 1.38629 1.38629 1.38629
12470 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12471 18 3.15264 2.63580 3.19832 0.16869 18 - -
12472 1.38629 1.38629 1.38629 1.38629
12473 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12474 19 3.15264 2.63580 3.19832 0.16869 19 - -
12475 1.38629 1.38629 1.38629 1.38629
12476 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12477 20 2.99096 3.65126 0.11044 3.56262 20 - -
12478 1.38629 1.38629 1.38629 1.38629
12479 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12480 21 0.13385 3.44324 2.84268 3.35093 21 - -
12481 1.38629 1.38629 1.38629 1.38629
12482 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12483 22 2.99096 3.65126 0.11044 3.56262 22 - -
12484 1.38629 1.38629 1.38629 1.38629
12485 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12486 23 2.99096 3.65126 0.11044 3.56262 23 - -
12487 1.38629 1.38629 1.38629 1.38629
12488 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12489 24 3.15264 2.63580 3.19832 0.16869 24 - -
12490 1.38629 1.38629 1.38629 1.38629
12491 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12492 25 3.15264 2.63580 3.19832 0.16869 25 - -
12493 1.38629 1.38629 1.38629 1.38629
12494 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12495 26 3.50552 0.12189 3.55185 2.88142 26 - -
12496 1.38629 1.38629 1.38629 1.38629
12497 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12498 27 0.13385 3.44324 2.84268 3.35093 27 - -
12499 1.38629 1.38629 1.38629 1.38629
12500 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12501 28 3.15264 2.63580 3.19832 0.16869 28 - -
12502 1.38629 1.38629 1.38629 1.38629
12503 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12504 29 0.13385 3.44324 2.84268 3.35093 29 - -
12505 1.38629 1.38629 1.38629 1.38629
12506 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12507 30 3.15264 2.63580 3.19832 0.16869 30 - -
12508 1.38629 1.38629 1.38629 1.38629
12509 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12510 31 2.99096 3.65126 0.11044 3.56262 31 - -
12511 1.38629 1.38629 1.38629 1.38629
12512 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12513 32 2.99096 3.65126 0.11044 3.56262 32 - -
12514 1.38629 1.38629 1.38629 1.38629
12515 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12516 33 3.15264 2.63580 3.19832 0.16869 33 - -
12517 1.38629 1.38629 1.38629 1.38629
12518 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12519 34 3.15264 2.63580 3.19832 0.16869 34 - -
12520 1.38629 1.38629 1.38629 1.38629
12521 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12522 35 2.99096 3.65126 0.11044 3.56262 35 - -
12523 1.38629 1.38629 1.38629 1.38629
12524 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12525 36 0.13385 3.44324 2.84268 3.35093 36 - -
12526 1.38629 1.38629 1.38629 1.38629
12527 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12528 37 2.99096 3.65126 0.11044 3.56262 37 - -
12529 1.38629 1.38629 1.38629 1.38629
12530 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12531 38 3.15264 2.63580 3.19832 0.16869 38 - -
12532 1.38629 1.38629 1.38629 1.38629
12533 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12534 39 2.99096 3.65126 0.11044 3.56262 39 - -
12535 1.38629 1.38629 1.38629 1.38629
12536 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12537 40 3.50552 0.12189 3.55185 2.88142 40 - -
12538 1.38629 1.38629 1.38629 1.38629
12539 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12540 41 3.15264 2.63580 3.19832 0.16869 41 - -
12541 1.38629 1.38629 1.38629 1.38629
12542 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12543 42 0.13385 3.44324 2.84268 3.35093 42 - -
12544 1.38629 1.38629 1.38629 1.38629
12545 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12546 43 3.15264 2.63580 3.19832 0.16869 43 - -
12547 1.38629 1.38629 1.38629 1.38629
12548 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12549 44 0.13385 3.44324 2.84268 3.35093 44 - -
12550 1.38629 1.38629 1.38629 1.38629
12551 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
12552 45 0.13385 3.44324 2.84268 3.35093 45 - -
12553 1.38629 1.38629 1.38629 1.38629
12554 0.01793 4.03001 * 1.46634 0.26236 0.00000 *
12555 //
12556 HMMER3/b [3.0 | March 2010]
12557 NAME 3_End_Metazoa_58S_end_nine_long
12558 LENG 45
12559 ALPH DNA
12560 RF no
12561 CS no
12562 MAP yes
12563 DATE Sat Feb 25 14:35:36 2012
12564 NSEQ 6
12565 EFFN 3.506836
12566 CKSUM 1997454489
12567 STATS LOCAL MSV -7.2053 0.71932
12568 STATS LOCAL VITERBI -7.6533 0.71932
12569 STATS LOCAL FORWARD -4.0088 0.71932
12570 HMM A C G T
12571 m->m m->i m->d i->m i->i d->m d->d
12572 COMPO 1.81914 1.45131 1.19033 1.20581
12573 1.38629 1.38629 1.38629 1.38629
12574 0.03567 4.04425 4.04425 1.46634 0.26236 0.00000 *
12575 1 2.98701 3.64546 0.11104 3.55619 1 - -
12576 1.38629 1.38629 1.38629 1.38629
12577 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12578 2 3.49888 0.12263 3.54550 2.87663 2 - -
12579 1.38629 1.38629 1.38629 1.38629
12580 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12581 3 3.49888 0.12263 3.54550 2.87663 3 - -
12582 1.38629 1.38629 1.38629 1.38629
12583 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12584 4 0.13457 3.43745 2.83894 3.34459 4 - -
12585 1.38629 1.38629 1.38629 1.38629
12586 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12587 5 3.49888 0.12263 3.54550 2.87663 5 - -
12588 1.38629 1.38629 1.38629 1.38629
12589 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12590 6 3.14671 2.63204 3.19263 0.16959 6 - -
12591 1.38629 1.38629 1.38629 1.38629
12592 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12593 7 0.13457 3.43745 2.83894 3.34459 7 - -
12594 1.38629 1.38629 1.38629 1.38629
12595 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12596 8 2.98701 3.64546 0.11104 3.55619 8 - -
12597 1.38629 1.38629 1.38629 1.38629
12598 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12599 9 2.98701 3.64546 0.11104 3.55619 9 - -
12600 1.38629 1.38629 1.38629 1.38629
12601 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12602 10 2.43781 0.94522 2.50951 0.81476 10 - -
12603 1.38629 1.38629 1.38629 1.38629
12604 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12605 11 3.14671 2.63204 3.19263 0.16959 11 - -
12606 1.38629 1.38629 1.38629 1.38629
12607 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12608 12 3.14671 2.63204 3.19263 0.16959 12 - -
12609 1.38629 1.38629 1.38629 1.38629
12610 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12611 13 2.98701 3.64546 0.11104 3.55619 13 - -
12612 1.38629 1.38629 1.38629 1.38629
12613 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12614 14 2.53262 0.59011 2.60406 1.22993 14 - -
12615 1.38629 1.38629 1.38629 1.38629
12616 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12617 15 3.14671 2.63204 3.19263 0.16959 15 - -
12618 1.38629 1.38629 1.38629 1.38629
12619 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12620 16 3.49888 0.12263 3.54550 2.87663 16 - -
12621 1.38629 1.38629 1.38629 1.38629
12622 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12623 17 3.49888 0.12263 3.54550 2.87663 17 - -
12624 1.38629 1.38629 1.38629 1.38629
12625 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12626 18 3.14671 2.63204 3.19263 0.16959 18 - -
12627 1.38629 1.38629 1.38629 1.38629
12628 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12629 19 0.13457 3.43745 2.83894 3.34459 19 - -
12630 1.38629 1.38629 1.38629 1.38629
12631 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12632 20 3.14671 2.63204 3.19263 0.16959 20 - -
12633 1.38629 1.38629 1.38629 1.38629
12634 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12635 21 3.14671 2.63204 3.19263 0.16959 21 - -
12636 1.38629 1.38629 1.38629 1.38629
12637 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12638 22 2.98701 3.64546 0.11104 3.55619 22 - -
12639 1.38629 1.38629 1.38629 1.38629
12640 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12641 23 2.98701 3.64546 0.11104 3.55619 23 - -
12642 1.38629 1.38629 1.38629 1.38629
12643 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12644 24 3.49888 0.12263 3.54550 2.87663 24 - -
12645 1.38629 1.38629 1.38629 1.38629
12646 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12647 25 0.13457 3.43745 2.83894 3.34459 25 - -
12648 1.38629 1.38629 1.38629 1.38629
12649 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12650 26 3.49888 0.12263 3.54550 2.87663 26 - -
12651 1.38629 1.38629 1.38629 1.38629
12652 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12653 27 2.98701 3.64546 0.11104 3.55619 27 - -
12654 1.38629 1.38629 1.38629 1.38629
12655 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12656 28 3.14671 2.63204 3.19263 0.16959 28 - -
12657 1.38629 1.38629 1.38629 1.38629
12658 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12659 29 3.49888 0.12263 3.54550 2.87663 29 - -
12660 1.38629 1.38629 1.38629 1.38629
12661 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12662 30 3.14671 2.63204 3.19263 0.16959 30 - -
12663 1.38629 1.38629 1.38629 1.38629
12664 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12665 31 2.98701 3.64546 0.11104 3.55619 31 - -
12666 1.38629 1.38629 1.38629 1.38629
12667 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12668 32 2.98701 3.64546 0.11104 3.55619 32 - -
12669 1.38629 1.38629 1.38629 1.38629
12670 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12671 33 3.14671 2.63204 3.19263 0.16959 33 - -
12672 1.38629 1.38629 1.38629 1.38629
12673 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12674 34 3.14671 2.63204 3.19263 0.16959 34 - -
12675 1.38629 1.38629 1.38629 1.38629
12676 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12677 35 2.98701 3.64546 0.11104 3.55619 35 - -
12678 1.38629 1.38629 1.38629 1.38629
12679 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12680 36 0.13457 3.43745 2.83894 3.34459 36 - -
12681 1.38629 1.38629 1.38629 1.38629
12682 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12683 37 2.98701 3.64546 0.11104 3.55619 37 - -
12684 1.38629 1.38629 1.38629 1.38629
12685 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12686 38 2.98701 3.64546 0.11104 3.55619 38 - -
12687 1.38629 1.38629 1.38629 1.38629
12688 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12689 39 2.98701 3.64546 0.11104 3.55619 39 - -
12690 1.38629 1.38629 1.38629 1.38629
12691 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12692 40 3.14671 2.63204 3.19263 0.16959 40 - -
12693 1.38629 1.38629 1.38629 1.38629
12694 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12695 41 3.49888 0.12263 3.54550 2.87663 41 - -
12696 1.38629 1.38629 1.38629 1.38629
12697 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12698 42 2.98701 3.64546 0.11104 3.55619 42 - -
12699 1.38629 1.38629 1.38629 1.38629
12700 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12701 43 3.14671 2.63204 3.19263 0.16959 43 - -
12702 1.38629 1.38629 1.38629 1.38629
12703 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12704 44 0.13457 3.43745 2.83894 3.34459 44 - -
12705 1.38629 1.38629 1.38629 1.38629
12706 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547
12707 45 3.14671 2.63204 3.19263 0.16959 45 - -
12708 1.38629 1.38629 1.38629 1.38629
12709 0.01800 4.02657 * 1.46634 0.26236 0.00000 *
12710 //
12711 HMMER3/b [3.0 | March 2010]
12712 NAME 3_End_Metazoa_58S_end_nineteen_long
12713 LENG 45
12714 ALPH DNA
12715 RF no
12716 CS no
12717 MAP yes
12718 DATE Sat Feb 25 14:41:10 2012
12719 NSEQ 2
12720 EFFN 2.000000
12721 CKSUM 2976878512
12722 STATS LOCAL MSV -7.5610 0.72760
12723 STATS LOCAL VITERBI -8.2006 0.72760
12724 STATS LOCAL FORWARD -3.4835 0.72760
12725 HMM A C G T
12726 m->m m->i m->d i->m i->i d->m d->d
12727 COMPO 1.74298 1.29095 1.16722 1.43229
12728 1.38629 1.38629 1.38629 1.38629
12729 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
12730 1 2.53331 3.02441 0.20344 2.88069 1 - -
12731 1.38629 1.38629 1.38629 1.38629
12732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12733 2 2.53331 3.02441 0.20344 2.88069 2 - -
12734 1.38629 1.38629 1.38629 1.38629
12735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12736 3 2.81865 0.23582 2.88868 2.35662 3 - -
12737 1.38629 1.38629 1.38629 1.38629
12738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12739 4 2.81865 0.23582 2.88868 2.35662 4 - -
12740 1.38629 1.38629 1.38629 1.38629
12741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12742 5 2.81865 0.23582 2.88868 2.35662 5 - -
12743 1.38629 1.38629 1.38629 1.38629
12744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12745 6 2.57915 2.25909 2.64442 0.28946 6 - -
12746 1.38629 1.38629 1.38629 1.38629
12747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12748 7 0.23862 2.84929 2.43386 2.70756 7 - -
12749 1.38629 1.38629 1.38629 1.38629
12750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12751 8 2.53331 3.02441 0.20344 2.88069 8 - -
12752 1.38629 1.38629 1.38629 1.38629
12753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12754 9 2.53331 3.02441 0.20344 2.88069 9 - -
12755 1.38629 1.38629 1.38629 1.38629
12756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12757 10 0.23862 2.84929 2.43386 2.70756 10 - -
12758 1.38629 1.38629 1.38629 1.38629
12759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12760 11 2.81865 0.23582 2.88868 2.35662 11 - -
12761 1.38629 1.38629 1.38629 1.38629
12762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12763 12 2.57915 2.25909 2.64442 0.28946 12 - -
12764 1.38629 1.38629 1.38629 1.38629
12765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12766 13 2.57915 2.25909 2.64442 0.28946 13 - -
12767 1.38629 1.38629 1.38629 1.38629
12768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12769 14 2.53331 3.02441 0.20344 2.88069 14 - -
12770 1.38629 1.38629 1.38629 1.38629
12771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12772 15 2.57915 2.25909 2.64442 0.28946 15 - -
12773 1.38629 1.38629 1.38629 1.38629
12774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12775 16 2.57915 2.25909 2.64442 0.28946 16 - -
12776 1.38629 1.38629 1.38629 1.38629
12777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12778 17 2.81865 0.23582 2.88868 2.35662 17 - -
12779 1.38629 1.38629 1.38629 1.38629
12780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12781 18 2.81865 0.23582 2.88868 2.35662 18 - -
12782 1.38629 1.38629 1.38629 1.38629
12783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12784 19 2.57915 2.25909 2.64442 0.28946 19 - -
12785 1.38629 1.38629 1.38629 1.38629
12786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12787 20 2.53331 3.02441 0.20344 2.88069 20 - -
12788 1.38629 1.38629 1.38629 1.38629
12789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12790 21 2.53331 3.02441 0.20344 2.88069 21 - -
12791 1.38629 1.38629 1.38629 1.38629
12792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12793 22 2.53331 3.02441 0.20344 2.88069 22 - -
12794 1.38629 1.38629 1.38629 1.38629
12795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12796 23 2.81865 0.23582 2.88868 2.35662 23 - -
12797 1.38629 1.38629 1.38629 1.38629
12798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12799 24 2.81865 0.23582 2.88868 2.35662 24 - -
12800 1.38629 1.38629 1.38629 1.38629
12801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12802 25 0.23862 2.84929 2.43386 2.70756 25 - -
12803 1.38629 1.38629 1.38629 1.38629
12804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12805 26 2.81865 0.23582 2.88868 2.35662 26 - -
12806 1.38629 1.38629 1.38629 1.38629
12807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12808 27 0.23862 2.84929 2.43386 2.70756 27 - -
12809 1.38629 1.38629 1.38629 1.38629
12810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12811 28 2.81865 0.23582 2.88868 2.35662 28 - -
12812 1.38629 1.38629 1.38629 1.38629
12813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12814 29 2.81865 0.23582 2.88868 2.35662 29 - -
12815 1.38629 1.38629 1.38629 1.38629
12816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12817 30 2.57915 2.25909 2.64442 0.28946 30 - -
12818 1.38629 1.38629 1.38629 1.38629
12819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12820 31 2.53331 3.02441 0.20344 2.88069 31 - -
12821 1.38629 1.38629 1.38629 1.38629
12822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12823 32 0.23862 2.84929 2.43386 2.70756 32 - -
12824 1.38629 1.38629 1.38629 1.38629
12825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12826 33 2.81865 0.23582 2.88868 2.35662 33 - -
12827 1.38629 1.38629 1.38629 1.38629
12828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12829 34 2.57915 2.25909 2.64442 0.28946 34 - -
12830 1.38629 1.38629 1.38629 1.38629
12831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12832 35 2.53331 3.02441 0.20344 2.88069 35 - -
12833 1.38629 1.38629 1.38629 1.38629
12834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12835 36 0.23862 2.84929 2.43386 2.70756 36 - -
12836 1.38629 1.38629 1.38629 1.38629
12837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12838 37 2.53331 3.02441 0.20344 2.88069 37 - -
12839 1.38629 1.38629 1.38629 1.38629
12840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12841 38 2.53331 3.02441 0.20344 2.88069 38 - -
12842 1.38629 1.38629 1.38629 1.38629
12843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12844 39 2.53331 3.02441 0.20344 2.88069 39 - -
12845 1.38629 1.38629 1.38629 1.38629
12846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12847 40 2.57915 2.25909 2.64442 0.28946 40 - -
12848 1.38629 1.38629 1.38629 1.38629
12849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12850 41 2.81865 0.23582 2.88868 2.35662 41 - -
12851 1.38629 1.38629 1.38629 1.38629
12852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12853 42 2.53331 3.02441 0.20344 2.88069 42 - -
12854 1.38629 1.38629 1.38629 1.38629
12855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12856 43 2.53331 3.02441 0.20344 2.88069 43 - -
12857 1.38629 1.38629 1.38629 1.38629
12858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12859 44 2.57915 2.25909 2.64442 0.28946 44 - -
12860 1.38629 1.38629 1.38629 1.38629
12861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12862 45 2.57915 2.25909 2.64442 0.28946 45 - -
12863 1.38629 1.38629 1.38629 1.38629
12864 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
12865 //
12866 HMMER3/b [3.0 | March 2010]
12867 NAME 3_End_Metazoa_58S_end_onea_long
12868 LENG 45
12869 ALPH DNA
12870 RF no
12871 CS no
12872 MAP yes
12873 DATE Sat Feb 25 14:30:35 2012
12874 NSEQ 9
12875 EFFN 3.291504
12876 CKSUM 2632514188
12877 STATS LOCAL MSV -8.0045 0.71932
12878 STATS LOCAL VITERBI -7.8075 0.71932
12879 STATS LOCAL FORWARD -3.8898 0.71932
12880 HMM A C G T
12881 m->m m->i m->d i->m i->i d->m d->d
12882 COMPO 1.95617 1.19844 1.04918 1.57643
12883 1.38629 1.38629 1.38629 1.38629
12884 0.03710 4.00579 4.00579 1.46634 0.26236 0.00000 *
12885 1 2.94052 3.57756 0.11828 3.48118 1 - -
12886 1.38629 1.38629 1.38629 1.38629
12887 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12888 2 3.42154 0.13160 3.47149 2.82057 2 - -
12889 1.38629 1.38629 1.38629 1.38629
12890 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12891 3 2.94052 3.57756 0.11828 3.48118 3 - -
12892 1.38629 1.38629 1.38629 1.38629
12893 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12894 4 2.94052 3.57756 0.11828 3.48118 4 - -
12895 1.38629 1.38629 1.38629 1.38629
12896 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12897 5 3.42154 0.13160 3.47149 2.82057 5 - -
12898 1.38629 1.38629 1.38629 1.38629
12899 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12900 6 3.42154 0.13160 3.47149 2.82057 6 - -
12901 1.38629 1.38629 1.38629 1.38629
12902 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12903 7 0.14323 3.37023 2.79540 3.27094 7 - -
12904 1.38629 1.38629 1.38629 1.38629
12905 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12906 8 3.07849 2.58870 3.12703 0.18032 8 - -
12907 1.38629 1.38629 1.38629 1.38629
12908 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12909 9 0.14323 3.37023 2.79540 3.27094 9 - -
12910 1.38629 1.38629 1.38629 1.38629
12911 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12912 10 2.94052 3.57756 0.11828 3.48118 10 - -
12913 1.38629 1.38629 1.38629 1.38629
12914 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12915 11 2.94052 3.57756 0.11828 3.48118 11 - -
12916 1.38629 1.38629 1.38629 1.38629
12917 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12918 12 3.42154 0.13160 3.47149 2.82057 12 - -
12919 1.38629 1.38629 1.38629 1.38629
12920 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12921 13 3.07849 2.58870 3.12703 0.18032 13 - -
12922 1.38629 1.38629 1.38629 1.38629
12923 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12924 14 3.07849 2.58870 3.12703 0.18032 14 - -
12925 1.38629 1.38629 1.38629 1.38629
12926 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12927 15 2.94052 3.57756 0.11828 3.48118 15 - -
12928 1.38629 1.38629 1.38629 1.38629
12929 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12930 16 3.42154 0.13160 3.47149 2.82057 16 - -
12931 1.38629 1.38629 1.38629 1.38629
12932 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12933 17 3.42154 0.13160 3.47149 2.82057 17 - -
12934 1.38629 1.38629 1.38629 1.38629
12935 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12936 18 3.07849 2.58870 3.12703 0.18032 18 - -
12937 1.38629 1.38629 1.38629 1.38629
12938 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12939 19 0.37118 2.79453 1.71935 2.66280 19 - -
12940 1.38629 1.38629 1.38629 1.38629
12941 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12942 20 3.07849 2.58870 3.12703 0.18032 20 - -
12943 1.38629 1.38629 1.38629 1.38629
12944 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12945 21 2.94052 3.57756 0.11828 3.48118 21 - -
12946 1.38629 1.38629 1.38629 1.38629
12947 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12948 22 2.94052 3.57756 0.11828 3.48118 22 - -
12949 1.38629 1.38629 1.38629 1.38629
12950 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12951 23 3.42154 0.13160 3.47149 2.82057 23 - -
12952 1.38629 1.38629 1.38629 1.38629
12953 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12954 24 3.42154 0.13160 3.47149 2.82057 24 - -
12955 1.38629 1.38629 1.38629 1.38629
12956 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12957 25 0.14323 3.37023 2.79540 3.27094 25 - -
12958 1.38629 1.38629 1.38629 1.38629
12959 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12960 26 3.42154 0.13160 3.47149 2.82057 26 - -
12961 1.38629 1.38629 1.38629 1.38629
12962 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12963 27 2.94052 3.57756 0.11828 3.48118 27 - -
12964 1.38629 1.38629 1.38629 1.38629
12965 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12966 28 3.07849 2.58870 3.12703 0.18032 28 - -
12967 1.38629 1.38629 1.38629 1.38629
12968 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12969 29 3.42154 0.13160 3.47149 2.82057 29 - -
12970 1.38629 1.38629 1.38629 1.38629
12971 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12972 30 3.07849 2.58870 3.12703 0.18032 30 - -
12973 1.38629 1.38629 1.38629 1.38629
12974 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12975 31 2.94052 3.57756 0.11828 3.48118 31 - -
12976 1.38629 1.38629 1.38629 1.38629
12977 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12978 32 2.94052 3.57756 0.11828 3.48118 32 - -
12979 1.38629 1.38629 1.38629 1.38629
12980 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12981 33 3.42154 0.13160 3.47149 2.82057 33 - -
12982 1.38629 1.38629 1.38629 1.38629
12983 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12984 34 3.42154 0.13160 3.47149 2.82057 34 - -
12985 1.38629 1.38629 1.38629 1.38629
12986 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12987 35 2.94052 3.57756 0.11828 3.48118 35 - -
12988 1.38629 1.38629 1.38629 1.38629
12989 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12990 36 0.14323 3.37023 2.79540 3.27094 36 - -
12991 1.38629 1.38629 1.38629 1.38629
12992 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12993 37 2.94052 3.57756 0.11828 3.48118 37 - -
12994 1.38629 1.38629 1.38629 1.38629
12995 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12996 38 2.29538 1.79342 0.45179 2.33929 38 - -
12997 1.38629 1.38629 1.38629 1.38629
12998 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
12999 39 2.94052 3.57756 0.11828 3.48118 39 - -
13000 1.38629 1.38629 1.38629 1.38629
13001 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
13002 40 3.07849 2.58870 3.12703 0.18032 40 - -
13003 1.38629 1.38629 1.38629 1.38629
13004 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
13005 41 3.42154 0.13160 3.47149 2.82057 41 - -
13006 1.38629 1.38629 1.38629 1.38629
13007 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
13008 42 2.94052 3.57756 0.11828 3.48118 42 - -
13009 1.38629 1.38629 1.38629 1.38629
13010 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
13011 43 2.94052 3.57756 0.11828 3.48118 43 - -
13012 1.38629 1.38629 1.38629 1.38629
13013 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
13014 44 3.42154 0.13160 3.47149 2.82057 44 - -
13015 1.38629 1.38629 1.38629 1.38629
13016 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547
13017 45 3.07849 2.58870 3.12703 0.18032 45 - -
13018 1.38629 1.38629 1.38629 1.38629
13019 0.01872 3.98741 * 1.46634 0.26236 0.00000 *
13020 //
13021 HMMER3/b [3.0 | March 2010]
13022 NAME 3_End_Metazoa_58S_end_oneb_long
13023 LENG 45
13024 ALPH DNA
13025 RF no
13026 CS no
13027 MAP yes
13028 DATE Sat Feb 25 14:30:43 2012
13029 NSEQ 4
13030 EFFN 3.074219
13031 CKSUM 2141832487
13032 STATS LOCAL MSV -8.0288 0.71933
13033 STATS LOCAL VITERBI -7.6965 0.71933
13034 STATS LOCAL FORWARD -3.8244 0.71933
13035 HMM A C G T
13036 m->m m->i m->d i->m i->i d->m d->d
13037 COMPO 2.04658 1.16114 0.99931 1.66304
13038 1.38629 1.38629 1.38629 1.38629
13039 0.03866 3.96542 3.96542 1.46634 0.26236 0.00000 *
13040 1 2.88875 3.50292 0.12688 3.39898 1 - -
13041 1.38629 1.38629 1.38629 1.38629
13042 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13043 2 3.33731 0.14224 3.39072 2.75871 2 - -
13044 1.38629 1.38629 1.38629 1.38629
13045 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13046 3 2.88875 3.50292 0.12688 3.39898 3 - -
13047 1.38629 1.38629 1.38629 1.38629
13048 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13049 4 2.88875 3.50292 0.12688 3.39898 4 - -
13050 1.38629 1.38629 1.38629 1.38629
13051 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13052 5 3.33731 0.14224 3.39072 2.75871 5 - -
13053 1.38629 1.38629 1.38629 1.38629
13054 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13055 6 3.33731 0.14224 3.39072 2.75871 6 - -
13056 1.38629 1.38629 1.38629 1.38629
13057 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13058 7 2.88875 3.50292 0.12688 3.39898 7 - -
13059 1.38629 1.38629 1.38629 1.38629
13060 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13061 8 3.00564 2.54221 3.05693 0.19265 8 - -
13062 1.38629 1.38629 1.38629 1.38629
13063 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13064 9 0.15336 3.29732 2.74769 3.19126 9 - -
13065 1.38629 1.38629 1.38629 1.38629
13066 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13067 10 2.88875 3.50292 0.12688 3.39898 10 - -
13068 1.38629 1.38629 1.38629 1.38629
13069 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13070 11 2.88875 3.50292 0.12688 3.39898 11 - -
13071 1.38629 1.38629 1.38629 1.38629
13072 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13073 12 3.33731 0.14224 3.39072 2.75871 12 - -
13074 1.38629 1.38629 1.38629 1.38629
13075 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13076 13 3.00564 2.54221 3.05693 0.19265 13 - -
13077 1.38629 1.38629 1.38629 1.38629
13078 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13079 14 3.00564 2.54221 3.05693 0.19265 14 - -
13080 1.38629 1.38629 1.38629 1.38629
13081 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13082 15 2.88875 3.50292 0.12688 3.39898 15 - -
13083 1.38629 1.38629 1.38629 1.38629
13084 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13085 16 3.33731 0.14224 3.39072 2.75871 16 - -
13086 1.38629 1.38629 1.38629 1.38629
13087 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13088 17 3.33731 0.14224 3.39072 2.75871 17 - -
13089 1.38629 1.38629 1.38629 1.38629
13090 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13091 18 3.00564 2.54221 3.05693 0.19265 18 - -
13092 1.38629 1.38629 1.38629 1.38629
13093 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13094 19 0.15336 3.29732 2.74769 3.19126 19 - -
13095 1.38629 1.38629 1.38629 1.38629
13096 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13097 20 3.33731 0.14224 3.39072 2.75871 20 - -
13098 1.38629 1.38629 1.38629 1.38629
13099 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13100 21 2.88875 3.50292 0.12688 3.39898 21 - -
13101 1.38629 1.38629 1.38629 1.38629
13102 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13103 22 2.88875 3.50292 0.12688 3.39898 22 - -
13104 1.38629 1.38629 1.38629 1.38629
13105 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13106 23 3.33731 0.14224 3.39072 2.75871 23 - -
13107 1.38629 1.38629 1.38629 1.38629
13108 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13109 24 3.33731 0.14224 3.39072 2.75871 24 - -
13110 1.38629 1.38629 1.38629 1.38629
13111 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13112 25 0.15336 3.29732 2.74769 3.19126 25 - -
13113 1.38629 1.38629 1.38629 1.38629
13114 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13115 26 3.33731 0.14224 3.39072 2.75871 26 - -
13116 1.38629 1.38629 1.38629 1.38629
13117 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13118 27 2.88875 3.50292 0.12688 3.39898 27 - -
13119 1.38629 1.38629 1.38629 1.38629
13120 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13121 28 3.00564 2.54221 3.05693 0.19265 28 - -
13122 1.38629 1.38629 1.38629 1.38629
13123 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13124 29 3.33731 0.14224 3.39072 2.75871 29 - -
13125 1.38629 1.38629 1.38629 1.38629
13126 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13127 30 3.00564 2.54221 3.05693 0.19265 30 - -
13128 1.38629 1.38629 1.38629 1.38629
13129 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13130 31 2.88875 3.50292 0.12688 3.39898 31 - -
13131 1.38629 1.38629 1.38629 1.38629
13132 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13133 32 2.88875 3.50292 0.12688 3.39898 32 - -
13134 1.38629 1.38629 1.38629 1.38629
13135 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13136 33 3.33731 0.14224 3.39072 2.75871 33 - -
13137 1.38629 1.38629 1.38629 1.38629
13138 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13139 34 3.33731 0.14224 3.39072 2.75871 34 - -
13140 1.38629 1.38629 1.38629 1.38629
13141 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13142 35 2.88875 3.50292 0.12688 3.39898 35 - -
13143 1.38629 1.38629 1.38629 1.38629
13144 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13145 36 0.15336 3.29732 2.74769 3.19126 36 - -
13146 1.38629 1.38629 1.38629 1.38629
13147 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13148 37 2.88875 3.50292 0.12688 3.39898 37 - -
13149 1.38629 1.38629 1.38629 1.38629
13150 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13151 38 2.88875 3.50292 0.12688 3.39898 38 - -
13152 1.38629 1.38629 1.38629 1.38629
13153 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13154 39 2.88875 3.50292 0.12688 3.39898 39 - -
13155 1.38629 1.38629 1.38629 1.38629
13156 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13157 40 3.00564 2.54221 3.05693 0.19265 40 - -
13158 1.38629 1.38629 1.38629 1.38629
13159 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13160 41 3.33731 0.14224 3.39072 2.75871 41 - -
13161 1.38629 1.38629 1.38629 1.38629
13162 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13163 42 2.88875 3.50292 0.12688 3.39898 42 - -
13164 1.38629 1.38629 1.38629 1.38629
13165 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13166 43 2.88875 3.50292 0.12688 3.39898 43 - -
13167 1.38629 1.38629 1.38629 1.38629
13168 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13169 44 3.33731 0.14224 3.39072 2.75871 44 - -
13170 1.38629 1.38629 1.38629 1.38629
13171 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547
13172 45 3.00564 2.54221 3.05693 0.19265 45 - -
13173 1.38629 1.38629 1.38629 1.38629
13174 0.01952 3.94627 * 1.46634 0.26236 0.00000 *
13175 //
13176 HMMER3/b [3.0 | March 2010]
13177 NAME 3_End_Metazoa_58S_end_onec_long
13178 LENG 45
13179 ALPH DNA
13180 RF no
13181 CS no
13182 MAP yes
13183 DATE Sat Feb 25 14:30:49 2012
13184 NSEQ 20
13185 EFFN 3.178711
13186 CKSUM 1515020791
13187 STATS LOCAL MSV -7.9446 0.71931
13188 STATS LOCAL VITERBI -7.7967 0.71931
13189 STATS LOCAL FORWARD -4.1571 0.71931
13190 HMM A C G T
13191 m->m m->i m->d i->m i->i d->m d->d
13192 COMPO 1.92667 1.26232 1.04143 1.52134
13193 1.38629 1.38629 1.38629 1.38629
13194 0.03789 3.98503 3.98503 1.46634 0.26236 0.00000 *
13195 1 2.91430 3.53962 0.12257 3.43936 1 - -
13196 1.38629 1.38629 1.38629 1.38629
13197 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13198 2 3.37862 0.13690 3.43035 2.78916 2 - -
13199 1.38629 1.38629 1.38629 1.38629
13200 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13201 3 2.91430 3.53962 0.12257 3.43936 3 - -
13202 1.38629 1.38629 1.38629 1.38629
13203 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13204 4 2.91430 3.53962 0.12257 3.43936 4 - -
13205 1.38629 1.38629 1.38629 1.38629
13206 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13207 5 3.37862 0.13690 3.43035 2.78916 5 - -
13208 1.38629 1.38629 1.38629 1.38629
13209 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13210 6 3.04119 2.56493 3.09115 0.18651 6 - -
13211 1.38629 1.38629 1.38629 1.38629
13212 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13213 7 0.14829 3.33304 2.77114 3.23028 7 - -
13214 1.38629 1.38629 1.38629 1.38629
13215 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13216 8 3.37862 0.13690 3.43035 2.78916 8 - -
13217 1.38629 1.38629 1.38629 1.38629
13218 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13219 9 2.91430 3.53962 0.12257 3.43936 9 - -
13220 1.38629 1.38629 1.38629 1.38629
13221 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13222 10 2.91430 3.53962 0.12257 3.43936 10 - -
13223 1.38629 1.38629 1.38629 1.38629
13224 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13225 11 2.91430 3.53962 0.12257 3.43936 11 - -
13226 1.38629 1.38629 1.38629 1.38629
13227 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13228 12 0.14829 3.33304 2.77114 3.23028 12 - -
13229 1.38629 1.38629 1.38629 1.38629
13230 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13231 13 3.04119 2.56493 3.09115 0.18651 13 - -
13232 1.38629 1.38629 1.38629 1.38629
13233 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13234 14 0.14829 3.33304 2.77114 3.23028 14 - -
13235 1.38629 1.38629 1.38629 1.38629
13236 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13237 15 3.04119 2.56493 3.09115 0.18651 15 - -
13238 1.38629 1.38629 1.38629 1.38629
13239 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13240 16 3.37862 0.13690 3.43035 2.78916 16 - -
13241 1.38629 1.38629 1.38629 1.38629
13242 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13243 17 3.37862 0.13690 3.43035 2.78916 17 - -
13244 1.38629 1.38629 1.38629 1.38629
13245 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13246 18 3.04119 2.56493 3.09115 0.18651 18 - -
13247 1.38629 1.38629 1.38629 1.38629
13248 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13249 19 2.91430 3.53962 0.12257 3.43936 19 - -
13250 1.38629 1.38629 1.38629 1.38629
13251 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13252 20 3.04119 2.56493 3.09115 0.18651 20 - -
13253 1.38629 1.38629 1.38629 1.38629
13254 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13255 21 2.91430 3.53962 0.12257 3.43936 21 - -
13256 1.38629 1.38629 1.38629 1.38629
13257 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13258 22 2.91430 3.53962 0.12257 3.43936 22 - -
13259 1.38629 1.38629 1.38629 1.38629
13260 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13261 23 3.37862 0.13690 3.43035 2.78916 23 - -
13262 1.38629 1.38629 1.38629 1.38629
13263 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13264 24 3.37862 0.13690 3.43035 2.78916 24 - -
13265 1.38629 1.38629 1.38629 1.38629
13266 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13267 25 0.14829 3.33304 2.77114 3.23028 25 - -
13268 1.38629 1.38629 1.38629 1.38629
13269 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13270 26 3.37862 0.13690 3.43035 2.78916 26 - -
13271 1.38629 1.38629 1.38629 1.38629
13272 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13273 27 2.91430 3.53962 0.12257 3.43936 27 - -
13274 1.38629 1.38629 1.38629 1.38629
13275 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13276 28 2.71071 1.85835 2.77216 0.33540 28 - -
13277 1.38629 1.38629 1.38629 1.38629
13278 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13279 29 3.37862 0.13690 3.43035 2.78916 29 - -
13280 1.38629 1.38629 1.38629 1.38629
13281 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13282 30 3.04119 2.56493 3.09115 0.18651 30 - -
13283 1.38629 1.38629 1.38629 1.38629
13284 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13285 31 2.91430 3.53962 0.12257 3.43936 31 - -
13286 1.38629 1.38629 1.38629 1.38629
13287 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13288 32 3.04119 2.56493 3.09115 0.18651 32 - -
13289 1.38629 1.38629 1.38629 1.38629
13290 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13291 33 3.37862 0.13690 3.43035 2.78916 33 - -
13292 1.38629 1.38629 1.38629 1.38629
13293 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13294 34 3.37862 0.13690 3.43035 2.78916 34 - -
13295 1.38629 1.38629 1.38629 1.38629
13296 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13297 35 2.91430 3.53962 0.12257 3.43936 35 - -
13298 1.38629 1.38629 1.38629 1.38629
13299 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13300 36 0.14829 3.33304 2.77114 3.23028 36 - -
13301 1.38629 1.38629 1.38629 1.38629
13302 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13303 37 2.91430 3.53962 0.12257 3.43936 37 - -
13304 1.38629 1.38629 1.38629 1.38629
13305 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13306 38 2.91430 3.53962 0.12257 3.43936 38 - -
13307 1.38629 1.38629 1.38629 1.38629
13308 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13309 39 2.91430 3.53962 0.12257 3.43936 39 - -
13310 1.38629 1.38629 1.38629 1.38629
13311 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13312 40 3.04119 2.56493 3.09115 0.18651 40 - -
13313 1.38629 1.38629 1.38629 1.38629
13314 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13315 41 3.37862 0.13690 3.43035 2.78916 41 - -
13316 1.38629 1.38629 1.38629 1.38629
13317 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13318 42 2.91430 3.53962 0.12257 3.43936 42 - -
13319 1.38629 1.38629 1.38629 1.38629
13320 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13321 43 2.91430 3.53962 0.12257 3.43936 43 - -
13322 1.38629 1.38629 1.38629 1.38629
13323 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13324 44 3.37862 0.13690 3.43035 2.78916 44 - -
13325 1.38629 1.38629 1.38629 1.38629
13326 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
13327 45 3.04119 2.56493 3.09115 0.18651 45 - -
13328 1.38629 1.38629 1.38629 1.38629
13329 0.01913 3.96627 * 1.46634 0.26236 0.00000 *
13330 //
13331 HMMER3/b [3.0 | March 2010]
13332 NAME 3_End_Metazoa_58S_end_oned_long
13333 LENG 45
13334 ALPH DNA
13335 RF no
13336 CS no
13337 MAP yes
13338 DATE Sat Feb 25 14:30:56 2012
13339 NSEQ 9
13340 EFFN 3.212402
13341 CKSUM 274027828
13342 STATS LOCAL MSV -8.1725 0.71931
13343 STATS LOCAL VITERBI -7.7872 0.71931
13344 STATS LOCAL FORWARD -3.7945 0.71931
13345 HMM A C G T
13346 m->m m->i m->d i->m i->i d->m d->d
13347 COMPO 2.07732 1.14229 0.94269 1.79536
13348 1.38629 1.38629 1.38629 1.38629
13349 0.03765 3.99128 3.99128 1.46634 0.26236 0.00000 *
13350 1 2.92227 3.55113 0.12125 3.45204 1 - -
13351 1.38629 1.38629 1.38629 1.38629
13352 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13353 2 3.39162 0.13527 3.44282 2.79869 2 - -
13354 1.38629 1.38629 1.38629 1.38629
13355 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13356 3 2.92227 3.55113 0.12125 3.45204 3 - -
13357 1.38629 1.38629 1.38629 1.38629
13358 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13359 4 2.92227 3.55113 0.12125 3.45204 4 - -
13360 1.38629 1.38629 1.38629 1.38629
13361 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13362 5 3.39162 0.13527 3.44282 2.79869 5 - -
13363 1.38629 1.38629 1.38629 1.38629
13364 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13365 6 3.39162 0.13527 3.44282 2.79869 6 - -
13366 1.38629 1.38629 1.38629 1.38629
13367 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13368 7 2.92227 3.55113 0.12125 3.45204 7 - -
13369 1.38629 1.38629 1.38629 1.38629
13370 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13371 8 3.39162 0.13527 3.44282 2.79869 8 - -
13372 1.38629 1.38629 1.38629 1.38629
13373 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13374 9 2.92227 3.55113 0.12125 3.45204 9 - -
13375 1.38629 1.38629 1.38629 1.38629
13376 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13377 10 2.92227 3.55113 0.12125 3.45204 10 - -
13378 1.38629 1.38629 1.38629 1.38629
13379 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13380 11 2.92227 3.55113 0.12125 3.45204 11 - -
13381 1.38629 1.38629 1.38629 1.38629
13382 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13383 12 0.36910 2.78519 1.73448 2.65307 12 - -
13384 1.38629 1.38629 1.38629 1.38629
13385 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13386 13 3.05245 2.57211 3.10198 0.18462 13 - -
13387 1.38629 1.38629 1.38629 1.38629
13388 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13389 14 0.14674 3.34430 2.77850 3.24258 14 - -
13390 1.38629 1.38629 1.38629 1.38629
13391 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13392 15 3.05245 2.57211 3.10198 0.18462 15 - -
13393 1.38629 1.38629 1.38629 1.38629
13394 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13395 16 3.39162 0.13527 3.44282 2.79869 16 - -
13396 1.38629 1.38629 1.38629 1.38629
13397 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13398 17 3.39162 0.13527 3.44282 2.79869 17 - -
13399 1.38629 1.38629 1.38629 1.38629
13400 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13401 18 3.39162 0.13527 3.44282 2.79869 18 - -
13402 1.38629 1.38629 1.38629 1.38629
13403 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13404 19 2.92227 3.55113 0.12125 3.45204 19 - -
13405 1.38629 1.38629 1.38629 1.38629
13406 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13407 20 3.05245 2.57211 3.10198 0.18462 20 - -
13408 1.38629 1.38629 1.38629 1.38629
13409 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13410 21 2.92227 3.55113 0.12125 3.45204 21 - -
13411 1.38629 1.38629 1.38629 1.38629
13412 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13413 22 2.92227 3.55113 0.12125 3.45204 22 - -
13414 1.38629 1.38629 1.38629 1.38629
13415 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13416 23 3.39162 0.13527 3.44282 2.79869 23 - -
13417 1.38629 1.38629 1.38629 1.38629
13418 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13419 24 3.39162 0.13527 3.44282 2.79869 24 - -
13420 1.38629 1.38629 1.38629 1.38629
13421 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13422 25 0.14674 3.34430 2.77850 3.24258 25 - -
13423 1.38629 1.38629 1.38629 1.38629
13424 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13425 26 3.39162 0.13527 3.44282 2.79869 26 - -
13426 1.38629 1.38629 1.38629 1.38629
13427 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13428 27 2.92227 3.55113 0.12125 3.45204 27 - -
13429 1.38629 1.38629 1.38629 1.38629
13430 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13431 28 2.39765 1.07670 2.46934 0.72627 28 - -
13432 1.38629 1.38629 1.38629 1.38629
13433 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13434 29 3.39162 0.13527 3.44282 2.79869 29 - -
13435 1.38629 1.38629 1.38629 1.38629
13436 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13437 30 3.05245 2.57211 3.10198 0.18462 30 - -
13438 1.38629 1.38629 1.38629 1.38629
13439 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13440 31 2.92227 3.55113 0.12125 3.45204 31 - -
13441 1.38629 1.38629 1.38629 1.38629
13442 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13443 32 2.92227 3.55113 0.12125 3.45204 32 - -
13444 1.38629 1.38629 1.38629 1.38629
13445 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13446 33 3.39162 0.13527 3.44282 2.79869 33 - -
13447 1.38629 1.38629 1.38629 1.38629
13448 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13449 34 3.39162 0.13527 3.44282 2.79869 34 - -
13450 1.38629 1.38629 1.38629 1.38629
13451 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13452 35 2.92227 3.55113 0.12125 3.45204 35 - -
13453 1.38629 1.38629 1.38629 1.38629
13454 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13455 36 0.14674 3.34430 2.77850 3.24258 36 - -
13456 1.38629 1.38629 1.38629 1.38629
13457 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13458 37 2.92227 3.55113 0.12125 3.45204 37 - -
13459 1.38629 1.38629 1.38629 1.38629
13460 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13461 38 2.92227 3.55113 0.12125 3.45204 38 - -
13462 1.38629 1.38629 1.38629 1.38629
13463 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13464 39 2.92227 3.55113 0.12125 3.45204 39 - -
13465 1.38629 1.38629 1.38629 1.38629
13466 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13467 40 3.05245 2.57211 3.10198 0.18462 40 - -
13468 1.38629 1.38629 1.38629 1.38629
13469 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13470 41 3.39162 0.13527 3.44282 2.79869 41 - -
13471 1.38629 1.38629 1.38629 1.38629
13472 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13473 42 2.92227 3.55113 0.12125 3.45204 42 - -
13474 1.38629 1.38629 1.38629 1.38629
13475 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13476 43 2.92227 3.55113 0.12125 3.45204 43 - -
13477 1.38629 1.38629 1.38629 1.38629
13478 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13479 44 3.39162 0.13527 3.44282 2.79869 44 - -
13480 1.38629 1.38629 1.38629 1.38629
13481 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547
13482 45 3.05245 2.57211 3.10198 0.18462 45 - -
13483 1.38629 1.38629 1.38629 1.38629
13484 0.01900 3.97263 * 1.46634 0.26236 0.00000 *
13485 //
13486 HMMER3/b [3.0 | March 2010]
13487 NAME 3_End_Metazoa_58S_end_onee_long
13488 LENG 45
13489 ALPH DNA
13490 RF no
13491 CS no
13492 MAP yes
13493 DATE Sat Feb 25 14:31:04 2012
13494 NSEQ 22
13495 EFFN 3.391846
13496 CKSUM 2940126106
13497 STATS LOCAL MSV -7.2020 0.71933
13498 STATS LOCAL VITERBI -7.7925 0.71933
13499 STATS LOCAL FORWARD -4.0922 0.71933
13500 HMM A C G T
13501 m->m m->i m->d i->m i->i d->m d->d
13502 COMPO 2.06447 1.20648 1.02736 1.53286
13503 1.38629 1.38629 1.38629 1.38629
13504 0.03642 4.02389 4.02389 1.46634 0.26236 0.00000 *
13505 1 2.96274 3.60992 0.11476 3.51690 1 - -
13506 1.38629 1.38629 1.38629 1.38629
13507 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13508 2 3.45832 0.12724 3.50670 2.84731 2 - -
13509 1.38629 1.38629 1.38629 1.38629
13510 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13511 3 2.96274 3.60992 0.11476 3.51690 3 - -
13512 1.38629 1.38629 1.38629 1.38629
13513 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13514 4 2.96274 3.60992 0.11476 3.51690 4 - -
13515 1.38629 1.38629 1.38629 1.38629
13516 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13517 5 3.45832 0.12724 3.50670 2.84731 5 - -
13518 1.38629 1.38629 1.38629 1.38629
13519 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13520 6 3.07353 0.22642 3.13365 2.18210 6 - -
13521 1.38629 1.38629 1.38629 1.38629
13522 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13523 7 0.13904 3.40215 2.81612 3.30590 7 - -
13524 1.38629 1.38629 1.38629 1.38629
13525 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13526 8 2.78093 1.89402 2.84051 0.31587 8 - -
13527 1.38629 1.38629 1.38629 1.38629
13528 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13529 9 2.96274 3.60992 0.11476 3.51690 9 - -
13530 1.38629 1.38629 1.38629 1.38629
13531 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13532 10 2.96274 3.60992 0.11476 3.51690 10 - -
13533 1.38629 1.38629 1.38629 1.38629
13534 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13535 11 2.96274 3.60992 0.11476 3.51690 11 - -
13536 1.38629 1.38629 1.38629 1.38629
13537 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13538 12 3.11076 2.60922 3.15807 0.17515 12 - -
13539 1.38629 1.38629 1.38629 1.38629
13540 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13541 13 3.11076 2.60922 3.15807 0.17515 13 - -
13542 1.38629 1.38629 1.38629 1.38629
13543 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13544 14 1.58973 2.23205 2.37090 0.51867 14 - -
13545 1.38629 1.38629 1.38629 1.38629
13546 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13547 15 0.36529 2.81953 1.72361 2.68896 15 - -
13548 1.38629 1.38629 1.38629 1.38629
13549 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13550 16 3.45832 0.12724 3.50670 2.84731 16 - -
13551 1.38629 1.38629 1.38629 1.38629
13552 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13553 17 3.45832 0.12724 3.50670 2.84731 17 - -
13554 1.38629 1.38629 1.38629 1.38629
13555 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13556 18 3.11076 2.60922 3.15807 0.17515 18 - -
13557 1.38629 1.38629 1.38629 1.38629
13558 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13559 19 2.96274 3.60992 0.11476 3.51690 19 - -
13560 1.38629 1.38629 1.38629 1.38629
13561 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13562 20 3.11076 2.60922 3.15807 0.17515 20 - -
13563 1.38629 1.38629 1.38629 1.38629
13564 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13565 21 2.96274 3.60992 0.11476 3.51690 21 - -
13566 1.38629 1.38629 1.38629 1.38629
13567 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13568 22 2.96274 3.60992 0.11476 3.51690 22 - -
13569 1.38629 1.38629 1.38629 1.38629
13570 0.12907 4.02389 2.27105 1.46634 0.26236 1.09861 0.40547
13571 23 3.27131 0.15130 3.32731 2.70960 23 - -
13572 1.38629 1.38629 1.38629 1.38629
13573 0.03989 3.93471 3.93471 1.46634 0.26236 0.29755 1.35725
13574 24 3.45832 0.12724 3.50670 2.84731 24 - -
13575 1.38629 1.38629 1.38629 1.38629
13576 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13577 25 0.13904 3.40215 2.81612 3.30590 25 - -
13578 1.38629 1.38629 1.38629 1.38629
13579 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13580 26 3.45832 0.12724 3.50670 2.84731 26 - -
13581 1.38629 1.38629 1.38629 1.38629
13582 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13583 27 2.96274 3.60992 0.11476 3.51690 27 - -
13584 1.38629 1.38629 1.38629 1.38629
13585 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13586 28 3.45832 0.12724 3.50670 2.84731 28 - -
13587 1.38629 1.38629 1.38629 1.38629
13588 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13589 29 3.45832 0.12724 3.50670 2.84731 29 - -
13590 1.38629 1.38629 1.38629 1.38629
13591 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13592 30 3.11076 2.60922 3.15807 0.17515 30 - -
13593 1.38629 1.38629 1.38629 1.38629
13594 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13595 31 2.96274 3.60992 0.11476 3.51690 31 - -
13596 1.38629 1.38629 1.38629 1.38629
13597 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13598 32 3.11076 2.60922 3.15807 0.17515 32 - -
13599 1.38629 1.38629 1.38629 1.38629
13600 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13601 33 3.45832 0.12724 3.50670 2.84731 33 - -
13602 1.38629 1.38629 1.38629 1.38629
13603 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13604 34 3.45832 0.12724 3.50670 2.84731 34 - -
13605 1.38629 1.38629 1.38629 1.38629
13606 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13607 35 2.96274 3.60992 0.11476 3.51690 35 - -
13608 1.38629 1.38629 1.38629 1.38629
13609 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13610 36 0.13904 3.40215 2.81612 3.30590 36 - -
13611 1.38629 1.38629 1.38629 1.38629
13612 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13613 37 2.96274 3.60992 0.11476 3.51690 37 - -
13614 1.38629 1.38629 1.38629 1.38629
13615 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13616 38 2.96274 3.60992 0.11476 3.51690 38 - -
13617 1.38629 1.38629 1.38629 1.38629
13618 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13619 39 2.96274 3.60992 0.11476 3.51690 39 - -
13620 1.38629 1.38629 1.38629 1.38629
13621 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13622 40 3.11076 2.60922 3.15807 0.17515 40 - -
13623 1.38629 1.38629 1.38629 1.38629
13624 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13625 41 3.45832 0.12724 3.50670 2.84731 41 - -
13626 1.38629 1.38629 1.38629 1.38629
13627 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13628 42 2.96274 3.60992 0.11476 3.51690 42 - -
13629 1.38629 1.38629 1.38629 1.38629
13630 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13631 43 2.96274 3.60992 0.11476 3.51690 43 - -
13632 1.38629 1.38629 1.38629 1.38629
13633 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13634 44 3.45832 0.12724 3.50670 2.84731 44 - -
13635 1.38629 1.38629 1.38629 1.38629
13636 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547
13637 45 3.11076 2.60922 3.15807 0.17515 45 - -
13638 1.38629 1.38629 1.38629 1.38629
13639 0.01838 4.00585 * 1.46634 0.26236 0.00000 *
13640 //
13641 HMMER3/b [3.0 | March 2010]
13642 NAME 3_End_Metazoa_58S_end_onef_long
13643 LENG 45
13644 ALPH DNA
13645 RF no
13646 CS no
13647 MAP yes
13648 DATE Sat Feb 25 14:31:11 2012
13649 NSEQ 12
13650 EFFN 3.336914
13651 CKSUM 485870885
13652 STATS LOCAL MSV -8.2262 0.71933
13653 STATS LOCAL VITERBI -7.7462 0.71933
13654 STATS LOCAL FORWARD -4.1365 0.71933
13655 HMM A C G T
13656 m->m m->i m->d i->m i->i d->m d->d
13657 COMPO 2.15126 1.17982 0.99685 1.57365
13658 1.38629 1.38629 1.38629 1.38629
13659 0.03679 4.01402 4.01402 1.46634 0.26236 0.00000 *
13660 1 2.95070 3.59237 0.11666 3.49752 1 - -
13661 1.38629 1.38629 1.38629 1.38629
13662 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13663 2 3.43835 0.12958 3.48758 2.83281 2 - -
13664 1.38629 1.38629 1.38629 1.38629
13665 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13666 3 2.95070 3.59237 0.11666 3.49752 3 - -
13667 1.38629 1.38629 1.38629 1.38629
13668 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13669 4 2.95070 3.59237 0.11666 3.49752 4 - -
13670 1.38629 1.38629 1.38629 1.38629
13671 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13672 5 3.43835 0.12958 3.48758 2.83281 5 - -
13673 1.38629 1.38629 1.38629 1.38629
13674 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13675 6 3.43835 0.12958 3.48758 2.83281 6 - -
13676 1.38629 1.38629 1.38629 1.38629
13677 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13678 7 0.14130 3.38481 2.80488 3.28690 7 - -
13679 1.38629 1.38629 1.38629 1.38629
13680 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13681 8 3.43835 0.12958 3.48758 2.83281 8 - -
13682 1.38629 1.38629 1.38629 1.38629
13683 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13684 9 2.95070 3.59237 0.11666 3.49752 9 - -
13685 1.38629 1.38629 1.38629 1.38629
13686 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13687 10 2.95070 3.59237 0.11666 3.49752 10 - -
13688 1.38629 1.38629 1.38629 1.38629
13689 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13690 11 2.95070 3.59237 0.11666 3.49752 11 - -
13691 1.38629 1.38629 1.38629 1.38629
13692 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13693 12 3.09320 2.59806 3.14118 0.17794 12 - -
13694 1.38629 1.38629 1.38629 1.38629
13695 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13696 13 1.88666 0.40908 2.54597 2.24656 13 - -
13697 1.38629 1.38629 1.38629 1.38629
13698 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13699 14 1.88666 0.40908 2.54597 2.24656 14 - -
13700 1.38629 1.38629 1.38629 1.38629
13701 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13702 15 2.95070 3.59237 0.11666 3.49752 15 - -
13703 1.38629 1.38629 1.38629 1.38629
13704 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13705 16 3.43835 0.12958 3.48758 2.83281 16 - -
13706 1.38629 1.38629 1.38629 1.38629
13707 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13708 17 3.43835 0.12958 3.48758 2.83281 17 - -
13709 1.38629 1.38629 1.38629 1.38629
13710 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13711 18 3.43835 0.12958 3.48758 2.83281 18 - -
13712 1.38629 1.38629 1.38629 1.38629
13713 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13714 19 2.95070 3.59237 0.11666 3.49752 19 - -
13715 1.38629 1.38629 1.38629 1.38629
13716 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13717 20 3.09320 2.59806 3.14118 0.17794 20 - -
13718 1.38629 1.38629 1.38629 1.38629
13719 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13720 21 2.95070 3.59237 0.11666 3.49752 21 - -
13721 1.38629 1.38629 1.38629 1.38629
13722 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13723 22 2.95070 3.59237 0.11666 3.49752 22 - -
13724 1.38629 1.38629 1.38629 1.38629
13725 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13726 23 3.43835 0.12958 3.48758 2.83281 23 - -
13727 1.38629 1.38629 1.38629 1.38629
13728 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13729 24 3.09320 2.59806 3.14118 0.17794 24 - -
13730 1.38629 1.38629 1.38629 1.38629
13731 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13732 25 0.14130 3.38481 2.80488 3.28690 25 - -
13733 1.38629 1.38629 1.38629 1.38629
13734 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13735 26 3.43835 0.12958 3.48758 2.83281 26 - -
13736 1.38629 1.38629 1.38629 1.38629
13737 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13738 27 2.00701 3.04952 0.26854 2.92367 27 - -
13739 1.38629 1.38629 1.38629 1.38629
13740 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13741 28 3.09320 2.59806 3.14118 0.17794 28 - -
13742 1.38629 1.38629 1.38629 1.38629
13743 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13744 29 3.43835 0.12958 3.48758 2.83281 29 - -
13745 1.38629 1.38629 1.38629 1.38629
13746 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13747 30 3.09320 2.59806 3.14118 0.17794 30 - -
13748 1.38629 1.38629 1.38629 1.38629
13749 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13750 31 2.95070 3.59237 0.11666 3.49752 31 - -
13751 1.38629 1.38629 1.38629 1.38629
13752 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13753 32 3.09320 2.59806 3.14118 0.17794 32 - -
13754 1.38629 1.38629 1.38629 1.38629
13755 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13756 33 3.43835 0.12958 3.48758 2.83281 33 - -
13757 1.38629 1.38629 1.38629 1.38629
13758 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13759 34 3.43835 0.12958 3.48758 2.83281 34 - -
13760 1.38629 1.38629 1.38629 1.38629
13761 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13762 35 2.95070 3.59237 0.11666 3.49752 35 - -
13763 1.38629 1.38629 1.38629 1.38629
13764 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13765 36 0.14130 3.38481 2.80488 3.28690 36 - -
13766 1.38629 1.38629 1.38629 1.38629
13767 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13768 37 2.95070 3.59237 0.11666 3.49752 37 - -
13769 1.38629 1.38629 1.38629 1.38629
13770 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13771 38 2.95070 3.59237 0.11666 3.49752 38 - -
13772 1.38629 1.38629 1.38629 1.38629
13773 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13774 39 2.95070 3.59237 0.11666 3.49752 39 - -
13775 1.38629 1.38629 1.38629 1.38629
13776 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13777 40 3.09320 2.59806 3.14118 0.17794 40 - -
13778 1.38629 1.38629 1.38629 1.38629
13779 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13780 41 3.43835 0.12958 3.48758 2.83281 41 - -
13781 1.38629 1.38629 1.38629 1.38629
13782 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13783 42 2.95070 3.59237 0.11666 3.49752 42 - -
13784 1.38629 1.38629 1.38629 1.38629
13785 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13786 43 2.95070 3.59237 0.11666 3.49752 43 - -
13787 1.38629 1.38629 1.38629 1.38629
13788 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13789 44 3.09320 2.59806 3.14118 0.17794 44 - -
13790 1.38629 1.38629 1.38629 1.38629
13791 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
13792 45 3.09320 2.59806 3.14118 0.17794 45 - -
13793 1.38629 1.38629 1.38629 1.38629
13794 0.01856 3.99580 * 1.46634 0.26236 0.00000 *
13795 //
13796 HMMER3/b [3.0 | March 2010]
13797 NAME 3_End_Metazoa_58S_end_oneg_long
13798 LENG 45
13799 ALPH DNA
13800 RF no
13801 CS no
13802 MAP yes
13803 DATE Sat Feb 25 14:31:17 2012
13804 NSEQ 2
13805 EFFN 2.000000
13806 CKSUM 2296771254
13807 STATS LOCAL MSV -7.5226 0.72702
13808 STATS LOCAL VITERBI -8.3896 0.72702
13809 STATS LOCAL FORWARD -3.3649 0.72702
13810 HMM A C G T
13811 m->m m->i m->d i->m i->i d->m d->d
13812 COMPO 1.92402 1.20053 1.03636 1.61847
13813 1.38629 1.38629 1.38629 1.38629
13814 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
13815 1 2.53331 3.02441 0.20344 2.88069 1 - -
13816 1.38629 1.38629 1.38629 1.38629
13817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13818 2 2.81865 0.23582 2.88868 2.35662 2 - -
13819 1.38629 1.38629 1.38629 1.38629
13820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13821 3 2.53331 3.02441 0.20344 2.88069 3 - -
13822 1.38629 1.38629 1.38629 1.38629
13823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13824 4 2.53331 3.02441 0.20344 2.88069 4 - -
13825 1.38629 1.38629 1.38629 1.38629
13826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13827 5 2.81865 0.23582 2.88868 2.35662 5 - -
13828 1.38629 1.38629 1.38629 1.38629
13829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13830 6 2.81865 0.23582 2.88868 2.35662 6 - -
13831 1.38629 1.38629 1.38629 1.38629
13832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13833 7 0.23862 2.84929 2.43386 2.70756 7 - -
13834 1.38629 1.38629 1.38629 1.38629
13835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13836 8 2.57915 2.25909 2.64442 0.28946 8 - -
13837 1.38629 1.38629 1.38629 1.38629
13838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13839 9 2.53331 3.02441 0.20344 2.88069 9 - -
13840 1.38629 1.38629 1.38629 1.38629
13841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13842 10 2.53331 3.02441 0.20344 2.88069 10 - -
13843 1.38629 1.38629 1.38629 1.38629
13844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13845 11 2.53331 3.02441 0.20344 2.88069 11 - -
13846 1.38629 1.38629 1.38629 1.38629
13847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13848 12 2.81865 0.23582 2.88868 2.35662 12 - -
13849 1.38629 1.38629 1.38629 1.38629
13850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13851 13 2.57915 2.25909 2.64442 0.28946 13 - -
13852 1.38629 1.38629 1.38629 1.38629
13853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13854 14 0.23862 2.84929 2.43386 2.70756 14 - -
13855 1.38629 1.38629 1.38629 1.38629
13856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13857 15 2.53331 3.02441 0.20344 2.88069 15 - -
13858 1.38629 1.38629 1.38629 1.38629
13859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13860 16 2.81865 0.23582 2.88868 2.35662 16 - -
13861 1.38629 1.38629 1.38629 1.38629
13862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13863 17 2.81865 0.23582 2.88868 2.35662 17 - -
13864 1.38629 1.38629 1.38629 1.38629
13865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13866 18 2.57915 2.25909 2.64442 0.28946 18 - -
13867 1.38629 1.38629 1.38629 1.38629
13868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13869 19 2.53331 3.02441 0.20344 2.88069 19 - -
13870 1.38629 1.38629 1.38629 1.38629
13871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13872 20 2.57915 2.25909 2.64442 0.28946 20 - -
13873 1.38629 1.38629 1.38629 1.38629
13874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13875 21 2.53331 3.02441 0.20344 2.88069 21 - -
13876 1.38629 1.38629 1.38629 1.38629
13877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13878 22 2.53331 3.02441 0.20344 2.88069 22 - -
13879 1.38629 1.38629 1.38629 1.38629
13880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13881 23 2.81865 0.23582 2.88868 2.35662 23 - -
13882 1.38629 1.38629 1.38629 1.38629
13883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13884 24 2.81865 0.23582 2.88868 2.35662 24 - -
13885 1.38629 1.38629 1.38629 1.38629
13886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13887 25 0.23862 2.84929 2.43386 2.70756 25 - -
13888 1.38629 1.38629 1.38629 1.38629
13889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13890 26 2.81865 0.23582 2.88868 2.35662 26 - -
13891 1.38629 1.38629 1.38629 1.38629
13892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13893 27 2.53331 3.02441 0.20344 2.88069 27 - -
13894 1.38629 1.38629 1.38629 1.38629
13895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13896 28 2.81865 0.23582 2.88868 2.35662 28 - -
13897 1.38629 1.38629 1.38629 1.38629
13898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13899 29 2.81865 0.23582 2.88868 2.35662 29 - -
13900 1.38629 1.38629 1.38629 1.38629
13901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13902 30 2.57915 2.25909 2.64442 0.28946 30 - -
13903 1.38629 1.38629 1.38629 1.38629
13904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13905 31 2.53331 3.02441 0.20344 2.88069 31 - -
13906 1.38629 1.38629 1.38629 1.38629
13907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13908 32 2.57915 2.25909 2.64442 0.28946 32 - -
13909 1.38629 1.38629 1.38629 1.38629
13910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13911 33 2.81865 0.23582 2.88868 2.35662 33 - -
13912 1.38629 1.38629 1.38629 1.38629
13913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13914 34 2.81865 0.23582 2.88868 2.35662 34 - -
13915 1.38629 1.38629 1.38629 1.38629
13916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13917 35 2.53331 3.02441 0.20344 2.88069 35 - -
13918 1.38629 1.38629 1.38629 1.38629
13919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13920 36 0.23862 2.84929 2.43386 2.70756 36 - -
13921 1.38629 1.38629 1.38629 1.38629
13922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13923 37 2.53331 3.02441 0.20344 2.88069 37 - -
13924 1.38629 1.38629 1.38629 1.38629
13925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13926 38 2.53331 3.02441 0.20344 2.88069 38 - -
13927 1.38629 1.38629 1.38629 1.38629
13928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13929 39 2.53331 3.02441 0.20344 2.88069 39 - -
13930 1.38629 1.38629 1.38629 1.38629
13931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13932 40 2.57915 2.25909 2.64442 0.28946 40 - -
13933 1.38629 1.38629 1.38629 1.38629
13934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13935 41 2.81865 0.23582 2.88868 2.35662 41 - -
13936 1.38629 1.38629 1.38629 1.38629
13937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13938 42 2.53331 3.02441 0.20344 2.88069 42 - -
13939 1.38629 1.38629 1.38629 1.38629
13940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13941 43 2.53331 3.02441 0.20344 2.88069 43 - -
13942 1.38629 1.38629 1.38629 1.38629
13943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13944 44 2.81865 0.23582 2.88868 2.35662 44 - -
13945 1.38629 1.38629 1.38629 1.38629
13946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
13947 45 2.57915 2.25909 2.64442 0.28946 45 - -
13948 1.38629 1.38629 1.38629 1.38629
13949 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
13950 //
13951 HMMER3/b [3.0 | March 2010]
13952 NAME 3_End_Metazoa_58S_end_oneh_long
13953 LENG 45
13954 ALPH DNA
13955 RF no
13956 CS no
13957 MAP yes
13958 DATE Sat Feb 25 14:31:22 2012
13959 NSEQ 25
13960 EFFN 3.195190
13961 CKSUM 3061172173
13962 STATS LOCAL MSV -8.2269 0.71932
13963 STATS LOCAL VITERBI -7.7433 0.71932
13964 STATS LOCAL FORWARD -4.0483 0.71932
13965 HMM A C G T
13966 m->m m->i m->d i->m i->i d->m d->d
13967 COMPO 1.82111 1.32343 1.14287 1.37424
13968 1.38629 1.38629 1.38629 1.38629
13969 0.03777 3.98809 3.98809 1.46634 0.26236 0.00000 *
13970 1 2.91821 3.54527 0.12192 3.44558 1 - -
13971 1.38629 1.38629 1.38629 1.38629
13972 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
13973 2 3.38500 0.13610 3.43647 2.79384 2 - -
13974 1.38629 1.38629 1.38629 1.38629
13975 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
13976 3 2.91821 3.54527 0.12192 3.44558 3 - -
13977 1.38629 1.38629 1.38629 1.38629
13978 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
13979 4 2.91821 3.54527 0.12192 3.44558 4 - -
13980 1.38629 1.38629 1.38629 1.38629
13981 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
13982 5 3.38500 0.13610 3.43647 2.79384 5 - -
13983 1.38629 1.38629 1.38629 1.38629
13984 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
13985 6 3.04671 2.56845 3.09646 0.18558 6 - -
13986 1.38629 1.38629 1.38629 1.38629
13987 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
13988 7 0.14753 3.33857 2.77475 3.23631 7 - -
13989 1.38629 1.38629 1.38629 1.38629
13990 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
13991 8 0.14753 3.33857 2.77475 3.23631 8 - -
13992 1.38629 1.38629 1.38629 1.38629
13993 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
13994 9 2.91821 3.54527 0.12192 3.44558 9 - -
13995 1.38629 1.38629 1.38629 1.38629
13996 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
13997 10 2.91821 3.54527 0.12192 3.44558 10 - -
13998 1.38629 1.38629 1.38629 1.38629
13999 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14000 11 2.91821 3.54527 0.12192 3.44558 11 - -
14001 1.38629 1.38629 1.38629 1.38629
14002 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14003 12 3.38500 0.13610 3.43647 2.79384 12 - -
14004 1.38629 1.38629 1.38629 1.38629
14005 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14006 13 3.04671 2.56845 3.09646 0.18558 13 - -
14007 1.38629 1.38629 1.38629 1.38629
14008 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14009 14 3.04671 2.56845 3.09646 0.18558 14 - -
14010 1.38629 1.38629 1.38629 1.38629
14011 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14012 15 2.91821 3.54527 0.12192 3.44558 15 - -
14013 1.38629 1.38629 1.38629 1.38629
14014 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14015 16 3.38500 0.13610 3.43647 2.79384 16 - -
14016 1.38629 1.38629 1.38629 1.38629
14017 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14018 17 3.04671 2.56845 3.09646 0.18558 17 - -
14019 1.38629 1.38629 1.38629 1.38629
14020 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14021 18 3.38500 0.13610 3.43647 2.79384 18 - -
14022 1.38629 1.38629 1.38629 1.38629
14023 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14024 19 3.04671 2.56845 3.09646 0.18558 19 - -
14025 1.38629 1.38629 1.38629 1.38629
14026 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14027 20 3.04671 2.56845 3.09646 0.18558 20 - -
14028 1.38629 1.38629 1.38629 1.38629
14029 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14030 21 0.14753 3.33857 2.77475 3.23631 21 - -
14031 1.38629 1.38629 1.38629 1.38629
14032 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14033 22 2.91821 3.54527 0.12192 3.44558 22 - -
14034 1.38629 1.38629 1.38629 1.38629
14035 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14036 23 3.38500 0.13610 3.43647 2.79384 23 - -
14037 1.38629 1.38629 1.38629 1.38629
14038 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14039 24 3.38500 0.13610 3.43647 2.79384 24 - -
14040 1.38629 1.38629 1.38629 1.38629
14041 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14042 25 0.14753 3.33857 2.77475 3.23631 25 - -
14043 1.38629 1.38629 1.38629 1.38629
14044 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14045 26 3.38500 0.13610 3.43647 2.79384 26 - -
14046 1.38629 1.38629 1.38629 1.38629
14047 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14048 27 2.91821 3.54527 0.12192 3.44558 27 - -
14049 1.38629 1.38629 1.38629 1.38629
14050 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14051 28 3.04671 2.56845 3.09646 0.18558 28 - -
14052 1.38629 1.38629 1.38629 1.38629
14053 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14054 29 3.04671 2.56845 3.09646 0.18558 29 - -
14055 1.38629 1.38629 1.38629 1.38629
14056 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14057 30 3.38500 0.13610 3.43647 2.79384 30 - -
14058 1.38629 1.38629 1.38629 1.38629
14059 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14060 31 2.91821 3.54527 0.12192 3.44558 31 - -
14061 1.38629 1.38629 1.38629 1.38629
14062 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14063 32 0.14753 3.33857 2.77475 3.23631 32 - -
14064 1.38629 1.38629 1.38629 1.38629
14065 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14066 33 3.04671 2.56845 3.09646 0.18558 33 - -
14067 1.38629 1.38629 1.38629 1.38629
14068 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14069 34 3.38500 0.13610 3.43647 2.79384 34 - -
14070 1.38629 1.38629 1.38629 1.38629
14071 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14072 35 2.91821 3.54527 0.12192 3.44558 35 - -
14073 1.38629 1.38629 1.38629 1.38629
14074 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14075 36 0.14753 3.33857 2.77475 3.23631 36 - -
14076 1.38629 1.38629 1.38629 1.38629
14077 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14078 37 2.91821 3.54527 0.12192 3.44558 37 - -
14079 1.38629 1.38629 1.38629 1.38629
14080 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14081 38 3.04671 2.56845 3.09646 0.18558 38 - -
14082 1.38629 1.38629 1.38629 1.38629
14083 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14084 39 2.91821 3.54527 0.12192 3.44558 39 - -
14085 1.38629 1.38629 1.38629 1.38629
14086 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14087 40 3.04671 2.56845 3.09646 0.18558 40 - -
14088 1.38629 1.38629 1.38629 1.38629
14089 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14090 41 3.38500 0.13610 3.43647 2.79384 41 - -
14091 1.38629 1.38629 1.38629 1.38629
14092 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14093 42 2.91821 3.54527 0.12192 3.44558 42 - -
14094 1.38629 1.38629 1.38629 1.38629
14095 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14096 43 2.91821 3.54527 0.12192 3.44558 43 - -
14097 1.38629 1.38629 1.38629 1.38629
14098 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14099 44 3.38500 0.13610 3.43647 2.79384 44 - -
14100 1.38629 1.38629 1.38629 1.38629
14101 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547
14102 45 3.04671 2.56845 3.09646 0.18558 45 - -
14103 1.38629 1.38629 1.38629 1.38629
14104 0.01907 3.96938 * 1.46634 0.26236 0.00000 *
14105 //
14106 HMMER3/b [3.0 | March 2010]
14107 NAME 3_End_Metazoa_58S_end_onei_long
14108 LENG 45
14109 ALPH DNA
14110 RF no
14111 CS no
14112 MAP yes
14113 DATE Sat Feb 25 14:31:28 2012
14114 NSEQ 4
14115 EFFN 3.246094
14116 CKSUM 767341417
14117 STATS LOCAL MSV -8.0857 0.71932
14118 STATS LOCAL VITERBI -7.7356 0.71932
14119 STATS LOCAL FORWARD -4.4479 0.71932
14120 HMM A C G T
14121 m->m m->i m->d i->m i->i d->m d->d
14122 COMPO 2.19748 1.31361 1.14567 1.19714
14123 1.38629 1.38629 1.38629 1.38629
14124 0.03741 3.99748 3.99748 1.46634 0.26236 0.00000 *
14125 1 2.93012 3.56249 0.11996 3.46456 1 - -
14126 1.38629 1.38629 1.38629 1.38629
14127 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14128 2 3.40447 0.13368 3.45513 2.80810 2 - -
14129 1.38629 1.38629 1.38629 1.38629
14130 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14131 3 2.93012 3.56249 0.11996 3.46456 3 - -
14132 1.38629 1.38629 1.38629 1.38629
14133 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14134 4 2.93012 3.56249 0.11996 3.46456 4 - -
14135 1.38629 1.38629 1.38629 1.38629
14136 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14137 5 3.40447 0.13368 3.45513 2.80810 5 - -
14138 1.38629 1.38629 1.38629 1.38629
14139 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14140 6 3.06361 2.57923 3.11272 0.18276 6 - -
14141 1.38629 1.38629 1.38629 1.38629
14142 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14143 7 3.06361 2.57923 3.11272 0.18276 7 - -
14144 1.38629 1.38629 1.38629 1.38629
14145 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14146 8 3.06361 2.57923 3.11272 0.18276 8 - -
14147 1.38629 1.38629 1.38629 1.38629
14148 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14149 9 2.93012 3.56249 0.11996 3.46456 9 - -
14150 1.38629 1.38629 1.38629 1.38629
14151 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14152 10 2.93012 3.56249 0.11996 3.46456 10 - -
14153 1.38629 1.38629 1.38629 1.38629
14154 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14155 11 2.93012 3.56249 0.11996 3.46456 11 - -
14156 1.38629 1.38629 1.38629 1.38629
14157 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14158 12 3.40447 0.13368 3.45513 2.80810 12 - -
14159 1.38629 1.38629 1.38629 1.38629
14160 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14161 13 3.06361 2.57923 3.11272 0.18276 13 - -
14162 1.38629 1.38629 1.38629 1.38629
14163 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14164 14 3.06361 2.57923 3.11272 0.18276 14 - -
14165 1.38629 1.38629 1.38629 1.38629
14166 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14167 15 2.93012 3.56249 0.11996 3.46456 15 - -
14168 1.38629 1.38629 1.38629 1.38629
14169 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14170 16 3.40447 0.13368 3.45513 2.80810 16 - -
14171 1.38629 1.38629 1.38629 1.38629
14172 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14173 17 3.40447 0.13368 3.45513 2.80810 17 - -
14174 1.38629 1.38629 1.38629 1.38629
14175 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14176 18 3.40447 0.13368 3.45513 2.80810 18 - -
14177 1.38629 1.38629 1.38629 1.38629
14178 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14179 19 3.06361 2.57923 3.11272 0.18276 19 - -
14180 1.38629 1.38629 1.38629 1.38629
14181 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14182 20 3.06361 2.57923 3.11272 0.18276 20 - -
14183 1.38629 1.38629 1.38629 1.38629
14184 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14185 21 0.14522 3.35543 2.78576 3.25475 21 - -
14186 1.38629 1.38629 1.38629 1.38629
14187 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14188 22 2.93012 3.56249 0.11996 3.46456 22 - -
14189 1.38629 1.38629 1.38629 1.38629
14190 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14191 23 3.40447 0.13368 3.45513 2.80810 23 - -
14192 1.38629 1.38629 1.38629 1.38629
14193 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14194 24 3.40447 0.13368 3.45513 2.80810 24 - -
14195 1.38629 1.38629 1.38629 1.38629
14196 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14197 25 3.06361 2.57923 3.11272 0.18276 25 - -
14198 1.38629 1.38629 1.38629 1.38629
14199 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14200 26 3.40447 0.13368 3.45513 2.80810 26 - -
14201 1.38629 1.38629 1.38629 1.38629
14202 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14203 27 2.93012 3.56249 0.11996 3.46456 27 - -
14204 1.38629 1.38629 1.38629 1.38629
14205 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14206 28 3.06361 2.57923 3.11272 0.18276 28 - -
14207 1.38629 1.38629 1.38629 1.38629
14208 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14209 29 3.06361 2.57923 3.11272 0.18276 29 - -
14210 1.38629 1.38629 1.38629 1.38629
14211 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14212 30 3.06361 2.57923 3.11272 0.18276 30 - -
14213 1.38629 1.38629 1.38629 1.38629
14214 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14215 31 2.93012 3.56249 0.11996 3.46456 31 - -
14216 1.38629 1.38629 1.38629 1.38629
14217 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14218 32 0.14522 3.35543 2.78576 3.25475 32 - -
14219 1.38629 1.38629 1.38629 1.38629
14220 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14221 33 3.06361 2.57923 3.11272 0.18276 33 - -
14222 1.38629 1.38629 1.38629 1.38629
14223 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14224 34 3.40447 0.13368 3.45513 2.80810 34 - -
14225 1.38629 1.38629 1.38629 1.38629
14226 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14227 35 2.93012 3.56249 0.11996 3.46456 35 - -
14228 1.38629 1.38629 1.38629 1.38629
14229 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14230 36 0.14522 3.35543 2.78576 3.25475 36 - -
14231 1.38629 1.38629 1.38629 1.38629
14232 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14233 37 2.93012 3.56249 0.11996 3.46456 37 - -
14234 1.38629 1.38629 1.38629 1.38629
14235 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14236 38 3.06361 2.57923 3.11272 0.18276 38 - -
14237 1.38629 1.38629 1.38629 1.38629
14238 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14239 39 2.93012 3.56249 0.11996 3.46456 39 - -
14240 1.38629 1.38629 1.38629 1.38629
14241 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14242 40 3.06361 2.57923 3.11272 0.18276 40 - -
14243 1.38629 1.38629 1.38629 1.38629
14244 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14245 41 3.40447 0.13368 3.45513 2.80810 41 - -
14246 1.38629 1.38629 1.38629 1.38629
14247 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14248 42 2.93012 3.56249 0.11996 3.46456 42 - -
14249 1.38629 1.38629 1.38629 1.38629
14250 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14251 43 2.93012 3.56249 0.11996 3.46456 43 - -
14252 1.38629 1.38629 1.38629 1.38629
14253 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14254 44 3.40447 0.13368 3.45513 2.80810 44 - -
14255 1.38629 1.38629 1.38629 1.38629
14256 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
14257 45 3.06361 2.57923 3.11272 0.18276 45 - -
14258 1.38629 1.38629 1.38629 1.38629
14259 0.01888 3.97895 * 1.46634 0.26236 0.00000 *
14260 //
14261 HMMER3/b [3.0 | March 2010]
14262 NAME 3_End_Metazoa_58S_end_onej_long
14263 LENG 45
14264 ALPH DNA
14265 RF no
14266 CS no
14267 MAP yes
14268 DATE Sat Feb 25 14:31:34 2012
14269 NSEQ 23
14270 EFFN 3.270874
14271 CKSUM 1661500112
14272 STATS LOCAL MSV -8.0611 0.71932
14273 STATS LOCAL VITERBI -7.7573 0.71932
14274 STATS LOCAL FORWARD -4.3597 0.71932
14275 HMM A C G T
14276 m->m m->i m->d i->m i->i d->m d->d
14277 COMPO 2.05613 1.31125 1.14336 1.25941
14278 1.38629 1.38629 1.38629 1.38629
14279 0.03724 4.00202 4.00202 1.46634 0.26236 0.00000 *
14280 1 2.93582 3.57075 0.11904 3.47366 1 - -
14281 1.38629 1.38629 1.38629 1.38629
14282 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14283 2 3.41382 0.13253 3.46409 2.81493 2 - -
14284 1.38629 1.38629 1.38629 1.38629
14285 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14286 3 2.93582 3.57075 0.11904 3.47366 3 - -
14287 1.38629 1.38629 1.38629 1.38629
14288 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14289 4 2.93582 3.57075 0.11904 3.47366 4 - -
14290 1.38629 1.38629 1.38629 1.38629
14291 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14292 5 3.41382 0.13253 3.46409 2.81493 5 - -
14293 1.38629 1.38629 1.38629 1.38629
14294 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14295 6 3.07175 2.58441 3.12055 0.18142 6 - -
14296 1.38629 1.38629 1.38629 1.38629
14297 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14298 7 3.07175 2.58441 3.12055 0.18142 7 - -
14299 1.38629 1.38629 1.38629 1.38629
14300 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14301 8 3.07175 2.58441 3.12055 0.18142 8 - -
14302 1.38629 1.38629 1.38629 1.38629
14303 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14304 9 2.93582 3.57075 0.11904 3.47366 9 - -
14305 1.38629 1.38629 1.38629 1.38629
14306 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14307 10 2.93582 3.57075 0.11904 3.47366 10 - -
14308 1.38629 1.38629 1.38629 1.38629
14309 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14310 11 2.93582 3.57075 0.11904 3.47366 11 - -
14311 1.38629 1.38629 1.38629 1.38629
14312 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14313 12 3.41382 0.13253 3.46409 2.81493 12 - -
14314 1.38629 1.38629 1.38629 1.38629
14315 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14316 13 3.07175 2.58441 3.12055 0.18142 13 - -
14317 1.38629 1.38629 1.38629 1.38629
14318 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14319 14 3.07175 2.58441 3.12055 0.18142 14 - -
14320 1.38629 1.38629 1.38629 1.38629
14321 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14322 15 2.93582 3.57075 0.11904 3.47366 15 - -
14323 1.38629 1.38629 1.38629 1.38629
14324 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14325 16 3.41382 0.13253 3.46409 2.81493 16 - -
14326 1.38629 1.38629 1.38629 1.38629
14327 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14328 17 3.41382 0.13253 3.46409 2.81493 17 - -
14329 1.38629 1.38629 1.38629 1.38629
14330 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14331 18 3.41382 0.13253 3.46409 2.81493 18 - -
14332 1.38629 1.38629 1.38629 1.38629
14333 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14334 19 3.07175 2.58441 3.12055 0.18142 19 - -
14335 1.38629 1.38629 1.38629 1.38629
14336 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14337 20 3.07175 2.58441 3.12055 0.18142 20 - -
14338 1.38629 1.38629 1.38629 1.38629
14339 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14340 21 0.14412 3.36353 2.79104 3.26362 21 - -
14341 1.38629 1.38629 1.38629 1.38629
14342 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14343 22 2.93582 3.57075 0.11904 3.47366 22 - -
14344 1.38629 1.38629 1.38629 1.38629
14345 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14346 23 3.41382 0.13253 3.46409 2.81493 23 - -
14347 1.38629 1.38629 1.38629 1.38629
14348 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14349 24 3.41382 0.13253 3.46409 2.81493 24 - -
14350 1.38629 1.38629 1.38629 1.38629
14351 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14352 25 0.14412 3.36353 2.79104 3.26362 25 - -
14353 1.38629 1.38629 1.38629 1.38629
14354 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14355 26 3.41382 0.13253 3.46409 2.81493 26 - -
14356 1.38629 1.38629 1.38629 1.38629
14357 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14358 27 2.93582 3.57075 0.11904 3.47366 27 - -
14359 1.38629 1.38629 1.38629 1.38629
14360 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14361 28 3.07175 2.58441 3.12055 0.18142 28 - -
14362 1.38629 1.38629 1.38629 1.38629
14363 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14364 29 3.07175 2.58441 3.12055 0.18142 29 - -
14365 1.38629 1.38629 1.38629 1.38629
14366 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14367 30 2.77009 1.93037 2.82972 0.31031 30 - -
14368 1.38629 1.38629 1.38629 1.38629
14369 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14370 31 2.93582 3.57075 0.11904 3.47366 31 - -
14371 1.38629 1.38629 1.38629 1.38629
14372 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14373 32 0.14412 3.36353 2.79104 3.26362 32 - -
14374 1.38629 1.38629 1.38629 1.38629
14375 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14376 33 3.07175 2.58441 3.12055 0.18142 33 - -
14377 1.38629 1.38629 1.38629 1.38629
14378 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14379 34 3.41382 0.13253 3.46409 2.81493 34 - -
14380 1.38629 1.38629 1.38629 1.38629
14381 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14382 35 2.93582 3.57075 0.11904 3.47366 35 - -
14383 1.38629 1.38629 1.38629 1.38629
14384 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14385 36 0.14412 3.36353 2.79104 3.26362 36 - -
14386 1.38629 1.38629 1.38629 1.38629
14387 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14388 37 2.93582 3.57075 0.11904 3.47366 37 - -
14389 1.38629 1.38629 1.38629 1.38629
14390 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14391 38 3.07175 2.58441 3.12055 0.18142 38 - -
14392 1.38629 1.38629 1.38629 1.38629
14393 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14394 39 2.93582 3.57075 0.11904 3.47366 39 - -
14395 1.38629 1.38629 1.38629 1.38629
14396 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14397 40 3.07175 2.58441 3.12055 0.18142 40 - -
14398 1.38629 1.38629 1.38629 1.38629
14399 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14400 41 3.41382 0.13253 3.46409 2.81493 41 - -
14401 1.38629 1.38629 1.38629 1.38629
14402 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14403 42 2.93582 3.57075 0.11904 3.47366 42 - -
14404 1.38629 1.38629 1.38629 1.38629
14405 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14406 43 2.93582 3.57075 0.11904 3.47366 43 - -
14407 1.38629 1.38629 1.38629 1.38629
14408 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14409 44 3.41382 0.13253 3.46409 2.81493 44 - -
14410 1.38629 1.38629 1.38629 1.38629
14411 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547
14412 45 3.07175 2.58441 3.12055 0.18142 45 - -
14413 1.38629 1.38629 1.38629 1.38629
14414 0.01879 3.98358 * 1.46634 0.26236 0.00000 *
14415 //
14416 HMMER3/b [3.0 | March 2010]
14417 NAME 3_End_Metazoa_58S_end_onek_long
14418 LENG 45
14419 ALPH DNA
14420 RF no
14421 CS no
14422 MAP yes
14423 DATE Sat Feb 25 14:31:54 2012
14424 NSEQ 3
14425 EFFN 3.000000
14426 CKSUM 427469681
14427 STATS LOCAL MSV -8.0634 0.72029
14428 STATS LOCAL VITERBI -7.6566 0.72029
14429 STATS LOCAL FORWARD -4.3376 0.72029
14430 HMM A C G T
14431 m->m m->i m->d i->m i->i d->m d->d
14432 COMPO 1.80677 1.45356 1.14412 1.26027
14433 1.38629 1.38629 1.38629 1.38629
14434 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
14435 1 2.86982 3.47591 0.13017 3.36931 1 - -
14436 1.38629 1.38629 1.38629 1.38629
14437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14438 2 3.30705 0.14631 3.36166 2.73626 2 - -
14439 1.38629 1.38629 1.38629 1.38629
14440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14441 3 0.15719 3.27118 2.73043 3.16274 3 - -
14442 1.38629 1.38629 1.38629 1.38629
14443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14444 4 2.86982 3.47591 0.13017 3.36931 4 - -
14445 1.38629 1.38629 1.38629 1.38629
14446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14447 5 3.30705 0.14631 3.36166 2.73626 5 - -
14448 1.38629 1.38629 1.38629 1.38629
14449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14450 6 2.97980 2.52563 3.03204 0.19727 6 - -
14451 1.38629 1.38629 1.38629 1.38629
14452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14453 7 0.15719 3.27118 2.73043 3.16274 7 - -
14454 1.38629 1.38629 1.38629 1.38629
14455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14456 8 2.86982 3.47591 0.13017 3.36931 8 - -
14457 1.38629 1.38629 1.38629 1.38629
14458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14459 9 2.86982 3.47591 0.13017 3.36931 9 - -
14460 1.38629 1.38629 1.38629 1.38629
14461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14462 10 2.86982 3.47591 0.13017 3.36931 10 - -
14463 1.38629 1.38629 1.38629 1.38629
14464 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14465 11 2.86982 3.47591 0.13017 3.36931 11 - -
14466 1.38629 1.38629 1.38629 1.38629
14467 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14468 12 3.30705 0.14631 3.36166 2.73626 12 - -
14469 1.38629 1.38629 1.38629 1.38629
14470 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14471 13 2.97980 2.52563 3.03204 0.19727 13 - -
14472 1.38629 1.38629 1.38629 1.38629
14473 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14474 14 2.97980 2.52563 3.03204 0.19727 14 - -
14475 1.38629 1.38629 1.38629 1.38629
14476 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14477 15 2.86982 3.47591 0.13017 3.36931 15 - -
14478 1.38629 1.38629 1.38629 1.38629
14479 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14480 16 3.30705 0.14631 3.36166 2.73626 16 - -
14481 1.38629 1.38629 1.38629 1.38629
14482 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14483 17 2.97980 2.52563 3.03204 0.19727 17 - -
14484 1.38629 1.38629 1.38629 1.38629
14485 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14486 18 2.97980 2.52563 3.03204 0.19727 18 - -
14487 1.38629 1.38629 1.38629 1.38629
14488 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14489 19 3.30705 0.14631 3.36166 2.73626 19 - -
14490 1.38629 1.38629 1.38629 1.38629
14491 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14492 20 2.97980 2.52563 3.03204 0.19727 20 - -
14493 1.38629 1.38629 1.38629 1.38629
14494 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14495 21 0.15719 3.27118 2.73043 3.16274 21 - -
14496 1.38629 1.38629 1.38629 1.38629
14497 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14498 22 2.86982 3.47591 0.13017 3.36931 22 - -
14499 1.38629 1.38629 1.38629 1.38629
14500 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14501 23 3.30705 0.14631 3.36166 2.73626 23 - -
14502 1.38629 1.38629 1.38629 1.38629
14503 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14504 24 2.97980 2.52563 3.03204 0.19727 24 - -
14505 1.38629 1.38629 1.38629 1.38629
14506 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14507 25 0.15719 3.27118 2.73043 3.16274 25 - -
14508 1.38629 1.38629 1.38629 1.38629
14509 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14510 26 3.30705 0.14631 3.36166 2.73626 26 - -
14511 1.38629 1.38629 1.38629 1.38629
14512 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14513 27 2.86982 3.47591 0.13017 3.36931 27 - -
14514 1.38629 1.38629 1.38629 1.38629
14515 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14516 28 2.97980 2.52563 3.03204 0.19727 28 - -
14517 1.38629 1.38629 1.38629 1.38629
14518 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14519 29 2.97980 2.52563 3.03204 0.19727 29 - -
14520 1.38629 1.38629 1.38629 1.38629
14521 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14522 30 2.97980 2.52563 3.03204 0.19727 30 - -
14523 1.38629 1.38629 1.38629 1.38629
14524 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14525 31 2.86982 3.47591 0.13017 3.36931 31 - -
14526 1.38629 1.38629 1.38629 1.38629
14527 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14528 32 0.15719 3.27118 2.73043 3.16274 32 - -
14529 1.38629 1.38629 1.38629 1.38629
14530 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14531 33 2.97980 2.52563 3.03204 0.19727 33 - -
14532 1.38629 1.38629 1.38629 1.38629
14533 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14534 34 3.30705 0.14631 3.36166 2.73626 34 - -
14535 1.38629 1.38629 1.38629 1.38629
14536 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14537 35 2.86982 3.47591 0.13017 3.36931 35 - -
14538 1.38629 1.38629 1.38629 1.38629
14539 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14540 36 0.15719 3.27118 2.73043 3.16274 36 - -
14541 1.38629 1.38629 1.38629 1.38629
14542 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14543 37 2.86982 3.47591 0.13017 3.36931 37 - -
14544 1.38629 1.38629 1.38629 1.38629
14545 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14546 38 2.97980 2.52563 3.03204 0.19727 38 - -
14547 1.38629 1.38629 1.38629 1.38629
14548 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14549 39 2.86982 3.47591 0.13017 3.36931 39 - -
14550 1.38629 1.38629 1.38629 1.38629
14551 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14552 40 2.97980 2.52563 3.03204 0.19727 40 - -
14553 1.38629 1.38629 1.38629 1.38629
14554 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14555 41 3.30705 0.14631 3.36166 2.73626 41 - -
14556 1.38629 1.38629 1.38629 1.38629
14557 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14558 42 2.86982 3.47591 0.13017 3.36931 42 - -
14559 1.38629 1.38629 1.38629 1.38629
14560 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14561 43 2.86982 3.47591 0.13017 3.36931 43 - -
14562 1.38629 1.38629 1.38629 1.38629
14563 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14564 44 3.30705 0.14631 3.36166 2.73626 44 - -
14565 1.38629 1.38629 1.38629 1.38629
14566 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14567 45 2.97980 2.52563 3.03204 0.19727 45 - -
14568 1.38629 1.38629 1.38629 1.38629
14569 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
14570 //
14571 HMMER3/b [3.0 | March 2010]
14572 NAME 3_End_Metazoa_58S_end_sevena_long
14573 LENG 45
14574 ALPH DNA
14575 RF no
14576 CS no
14577 MAP yes
14578 DATE Sat Feb 25 14:35:04 2012
14579 NSEQ 18
14580 EFFN 3.563965
14581 CKSUM 1492424210
14582 STATS LOCAL MSV -7.2875 0.71932
14583 STATS LOCAL VITERBI -7.5847 0.71932
14584 STATS LOCAL FORWARD -3.8412 0.71932
14585 HMM A C G T
14586 m->m m->i m->d i->m i->i d->m d->d
14587 COMPO 1.77673 1.34258 1.12915 1.40108
14588 1.38629 1.38629 1.38629 1.38629
14589 0.03531 4.05421 4.05421 1.46634 0.26236 0.00000 *
14590 1 2.99862 3.66252 0.10930 3.57508 1 - -
14591 1.38629 1.38629 1.38629 1.38629
14592 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14593 2 3.51842 0.12048 3.56419 2.89070 2 - -
14594 1.38629 1.38629 1.38629 1.38629
14595 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14596 3 2.45587 0.80883 2.52786 0.94417 3 - -
14597 1.38629 1.38629 1.38629 1.38629
14598 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14599 4 0.13247 3.45449 2.84993 3.36328 4 - -
14600 1.38629 1.38629 1.38629 1.38629
14601 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14602 5 3.16417 2.64312 3.20941 0.16696 5 - -
14603 1.38629 1.38629 1.38629 1.38629
14604 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14605 6 3.51842 0.12048 3.56419 2.89070 6 - -
14606 1.38629 1.38629 1.38629 1.38629
14607 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14608 7 2.99862 3.66252 0.10930 3.57508 7 - -
14609 1.38629 1.38629 1.38629 1.38629
14610 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14611 8 2.99862 3.66252 0.10930 3.57508 8 - -
14612 1.38629 1.38629 1.38629 1.38629
14613 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14614 9 2.99862 3.66252 0.10930 3.57508 9 - -
14615 1.38629 1.38629 1.38629 1.38629
14616 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14617 10 3.16417 2.64312 3.20941 0.16696 10 - -
14618 1.38629 1.38629 1.38629 1.38629
14619 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14620 11 3.16417 2.64312 3.20941 0.16696 11 - -
14621 1.38629 1.38629 1.38629 1.38629
14622 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14623 12 3.51842 0.12048 3.56419 2.89070 12 - -
14624 1.38629 1.38629 1.38629 1.38629
14625 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14626 13 0.13247 3.45449 2.84993 3.36328 13 - -
14627 1.38629 1.38629 1.38629 1.38629
14628 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14629 14 3.16417 2.64312 3.20941 0.16696 14 - -
14630 1.38629 1.38629 1.38629 1.38629
14631 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14632 15 3.16417 2.64312 3.20941 0.16696 15 - -
14633 1.38629 1.38629 1.38629 1.38629
14634 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14635 16 3.51842 0.12048 3.56419 2.89070 16 - -
14636 1.38629 1.38629 1.38629 1.38629
14637 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14638 17 3.51842 0.12048 3.56419 2.89070 17 - -
14639 1.38629 1.38629 1.38629 1.38629
14640 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14641 18 3.51842 0.12048 3.56419 2.89070 18 - -
14642 1.38629 1.38629 1.38629 1.38629
14643 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14644 19 2.99862 3.66252 0.10930 3.57508 19 - -
14645 1.38629 1.38629 1.38629 1.38629
14646 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14647 20 1.09883 1.59068 2.07002 1.08836 20 - -
14648 1.38629 1.38629 1.38629 1.38629
14649 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14650 21 3.16417 2.64312 3.20941 0.16696 21 - -
14651 1.38629 1.38629 1.38629 1.38629
14652 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14653 22 2.99862 3.66252 0.10930 3.57508 22 - -
14654 1.38629 1.38629 1.38629 1.38629
14655 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14656 23 2.99862 3.66252 0.10930 3.57508 23 - -
14657 1.38629 1.38629 1.38629 1.38629
14658 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14659 24 3.51842 0.12048 3.56419 2.89070 24 - -
14660 1.38629 1.38629 1.38629 1.38629
14661 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14662 25 0.13247 3.45449 2.84993 3.36328 25 - -
14663 1.38629 1.38629 1.38629 1.38629
14664 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14665 26 3.51842 0.12048 3.56419 2.89070 26 - -
14666 1.38629 1.38629 1.38629 1.38629
14667 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14668 27 2.99862 3.66252 0.10930 3.57508 27 - -
14669 1.38629 1.38629 1.38629 1.38629
14670 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14671 28 3.16417 2.64312 3.20941 0.16696 28 - -
14672 1.38629 1.38629 1.38629 1.38629
14673 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14674 29 3.51842 0.12048 3.56419 2.89070 29 - -
14675 1.38629 1.38629 1.38629 1.38629
14676 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14677 30 3.16417 2.64312 3.20941 0.16696 30 - -
14678 1.38629 1.38629 1.38629 1.38629
14679 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14680 31 2.99862 3.66252 0.10930 3.57508 31 - -
14681 1.38629 1.38629 1.38629 1.38629
14682 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14683 32 2.99862 3.66252 0.10930 3.57508 32 - -
14684 1.38629 1.38629 1.38629 1.38629
14685 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14686 33 3.51842 0.12048 3.56419 2.89070 33 - -
14687 1.38629 1.38629 1.38629 1.38629
14688 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14689 34 3.16417 2.64312 3.20941 0.16696 34 - -
14690 1.38629 1.38629 1.38629 1.38629
14691 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14692 35 2.99862 3.66252 0.10930 3.57508 35 - -
14693 1.38629 1.38629 1.38629 1.38629
14694 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14695 36 0.13247 3.45449 2.84993 3.36328 36 - -
14696 1.38629 1.38629 1.38629 1.38629
14697 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14698 37 2.99862 3.66252 0.10930 3.57508 37 - -
14699 1.38629 1.38629 1.38629 1.38629
14700 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14701 38 2.99862 3.66252 0.10930 3.57508 38 - -
14702 1.38629 1.38629 1.38629 1.38629
14703 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14704 39 2.99862 3.66252 0.10930 3.57508 39 - -
14705 1.38629 1.38629 1.38629 1.38629
14706 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14707 40 3.16417 2.64312 3.20941 0.16696 40 - -
14708 1.38629 1.38629 1.38629 1.38629
14709 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14710 41 3.51842 0.12048 3.56419 2.89070 41 - -
14711 1.38629 1.38629 1.38629 1.38629
14712 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14713 42 2.99862 3.66252 0.10930 3.57508 42 - -
14714 1.38629 1.38629 1.38629 1.38629
14715 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14716 43 0.13247 3.45449 2.84993 3.36328 43 - -
14717 1.38629 1.38629 1.38629 1.38629
14718 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14719 44 0.13247 3.45449 2.84993 3.36328 44 - -
14720 1.38629 1.38629 1.38629 1.38629
14721 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
14722 45 1.79664 2.31697 2.50966 0.42422 45 - -
14723 1.38629 1.38629 1.38629 1.38629
14724 0.01781 4.03671 * 1.46634 0.26236 0.00000 *
14725 //
14726 HMMER3/b [3.0 | March 2010]
14727 NAME 3_End_Metazoa_58S_end_sevenb_long
14728 LENG 45
14729 ALPH DNA
14730 RF no
14731 CS no
14732 MAP yes
14733 DATE Sat Feb 25 14:35:10 2012
14734 NSEQ 7
14735 EFFN 3.496582
14736 CKSUM 1558608
14737 STATS LOCAL MSV -7.3590 0.71933
14738 STATS LOCAL VITERBI -7.7029 0.71933
14739 STATS LOCAL FORWARD -4.0423 0.71933
14740 HMM A C G T
14741 m->m m->i m->d i->m i->i d->m d->d
14742 COMPO 1.58896 1.55480 1.18718 1.27457
14743 1.38629 1.38629 1.38629 1.38629
14744 0.03574 4.04245 4.04245 1.46634 0.26236 0.00000 *
14745 1 0.13496 3.43436 2.83695 3.34119 1 - -
14746 1.38629 1.38629 1.38629 1.38629
14747 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14748 2 3.49533 0.12303 3.54211 2.87408 2 - -
14749 1.38629 1.38629 1.38629 1.38629
14750 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14751 3 3.49533 0.12303 3.54211 2.87408 3 - -
14752 1.38629 1.38629 1.38629 1.38629
14753 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14754 4 0.13496 3.43436 2.83695 3.34119 4 - -
14755 1.38629 1.38629 1.38629 1.38629
14756 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14757 5 3.14355 2.63004 3.18959 0.17007 5 - -
14758 1.38629 1.38629 1.38629 1.38629
14759 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14760 6 2.60202 0.50178 2.67248 1.38094 6 - -
14761 1.38629 1.38629 1.38629 1.38629
14762 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14763 7 2.98489 3.64235 0.11136 3.55276 7 - -
14764 1.38629 1.38629 1.38629 1.38629
14765 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14766 8 2.98489 3.64235 0.11136 3.55276 8 - -
14767 1.38629 1.38629 1.38629 1.38629
14768 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14769 9 2.98489 3.64235 0.11136 3.55276 9 - -
14770 1.38629 1.38629 1.38629 1.38629
14771 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14772 10 3.14355 2.63004 3.18959 0.17007 10 - -
14773 1.38629 1.38629 1.38629 1.38629
14774 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14775 11 3.14355 2.63004 3.18959 0.17007 11 - -
14776 1.38629 1.38629 1.38629 1.38629
14777 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14778 12 2.98489 3.64235 0.11136 3.55276 12 - -
14779 1.38629 1.38629 1.38629 1.38629
14780 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14781 13 0.13496 3.43436 2.83695 3.34119 13 - -
14782 1.38629 1.38629 1.38629 1.38629
14783 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14784 14 3.14355 2.63004 3.18959 0.17007 14 - -
14785 1.38629 1.38629 1.38629 1.38629
14786 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14787 15 3.14355 2.63004 3.18959 0.17007 15 - -
14788 1.38629 1.38629 1.38629 1.38629
14789 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14790 16 3.49533 0.12303 3.54211 2.87408 16 - -
14791 1.38629 1.38629 1.38629 1.38629
14792 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14793 17 3.49533 0.12303 3.54211 2.87408 17 - -
14794 1.38629 1.38629 1.38629 1.38629
14795 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14796 18 3.49533 0.12303 3.54211 2.87408 18 - -
14797 1.38629 1.38629 1.38629 1.38629
14798 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14799 19 2.98489 3.64235 0.11136 3.55276 19 - -
14800 1.38629 1.38629 1.38629 1.38629
14801 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14802 20 0.13496 3.43436 2.83695 3.34119 20 - -
14803 1.38629 1.38629 1.38629 1.38629
14804 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14805 21 3.14355 2.63004 3.18959 0.17007 21 - -
14806 1.38629 1.38629 1.38629 1.38629
14807 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14808 22 2.98489 3.64235 0.11136 3.55276 22 - -
14809 1.38629 1.38629 1.38629 1.38629
14810 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14811 23 2.98489 3.64235 0.11136 3.55276 23 - -
14812 1.38629 1.38629 1.38629 1.38629
14813 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14814 24 3.14355 2.63004 3.18959 0.17007 24 - -
14815 1.38629 1.38629 1.38629 1.38629
14816 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14817 25 0.13496 3.43436 2.83695 3.34119 25 - -
14818 1.38629 1.38629 1.38629 1.38629
14819 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14820 26 3.49533 0.12303 3.54211 2.87408 26 - -
14821 1.38629 1.38629 1.38629 1.38629
14822 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14823 27 2.98489 3.64235 0.11136 3.55276 27 - -
14824 1.38629 1.38629 1.38629 1.38629
14825 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14826 28 3.14355 2.63004 3.18959 0.17007 28 - -
14827 1.38629 1.38629 1.38629 1.38629
14828 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14829 29 3.49533 0.12303 3.54211 2.87408 29 - -
14830 1.38629 1.38629 1.38629 1.38629
14831 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14832 30 3.14355 2.63004 3.18959 0.17007 30 - -
14833 1.38629 1.38629 1.38629 1.38629
14834 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14835 31 2.98489 3.64235 0.11136 3.55276 31 - -
14836 1.38629 1.38629 1.38629 1.38629
14837 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14838 32 2.98489 3.64235 0.11136 3.55276 32 - -
14839 1.38629 1.38629 1.38629 1.38629
14840 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14841 33 3.14355 2.63004 3.18959 0.17007 33 - -
14842 1.38629 1.38629 1.38629 1.38629
14843 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14844 34 3.14355 2.63004 3.18959 0.17007 34 - -
14845 1.38629 1.38629 1.38629 1.38629
14846 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14847 35 2.98489 3.64235 0.11136 3.55276 35 - -
14848 1.38629 1.38629 1.38629 1.38629
14849 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14850 36 0.13496 3.43436 2.83695 3.34119 36 - -
14851 1.38629 1.38629 1.38629 1.38629
14852 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14853 37 2.98489 3.64235 0.11136 3.55276 37 - -
14854 1.38629 1.38629 1.38629 1.38629
14855 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14856 38 2.98489 3.64235 0.11136 3.55276 38 - -
14857 1.38629 1.38629 1.38629 1.38629
14858 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14859 39 2.98489 3.64235 0.11136 3.55276 39 - -
14860 1.38629 1.38629 1.38629 1.38629
14861 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14862 40 3.14355 2.63004 3.18959 0.17007 40 - -
14863 1.38629 1.38629 1.38629 1.38629
14864 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14865 41 3.49533 0.12303 3.54211 2.87408 41 - -
14866 1.38629 1.38629 1.38629 1.38629
14867 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14868 42 0.13496 3.43436 2.83695 3.34119 42 - -
14869 1.38629 1.38629 1.38629 1.38629
14870 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14871 43 0.13496 3.43436 2.83695 3.34119 43 - -
14872 1.38629 1.38629 1.38629 1.38629
14873 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14874 44 3.14355 2.63004 3.18959 0.17007 44 - -
14875 1.38629 1.38629 1.38629 1.38629
14876 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547
14877 45 0.84492 2.19039 2.18152 1.06229 45 - -
14878 1.38629 1.38629 1.38629 1.38629
14879 0.01803 4.02474 * 1.46634 0.26236 0.00000 *
14880 //
14881 HMMER3/b [3.0 | March 2010]
14882 NAME 3_End_Metazoa_58S_end_seventeena_long
14883 LENG 45
14884 ALPH DNA
14885 RF no
14886 CS no
14887 MAP yes
14888 DATE Sat Feb 25 14:38:53 2012
14889 NSEQ 5
14890 EFFN 3.149414
14891 CKSUM 613401642
14892 STATS LOCAL MSV -8.0549 0.71933
14893 STATS LOCAL VITERBI -7.6860 0.71933
14894 STATS LOCAL FORWARD -4.2074 0.71933
14895 HMM A C G T
14896 m->m m->i m->d i->m i->i d->m d->d
14897 COMPO 1.82217 1.20881 1.14629 1.50525
14898 1.38629 1.38629 1.38629 1.38629
14899 0.03810 3.97957 3.97957 1.46634 0.26236 0.00000 *
14900 1 2.90726 3.52948 0.12374 3.42820 1 - -
14901 1.38629 1.38629 1.38629 1.38629
14902 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14903 2 3.03132 2.55863 3.08165 0.18819 2 - -
14904 1.38629 1.38629 1.38629 1.38629
14905 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14906 3 3.36719 0.13835 3.41939 2.78075 3 - -
14907 1.38629 1.38629 1.38629 1.38629
14908 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14909 4 3.36719 0.13835 3.41939 2.78075 4 - -
14910 1.38629 1.38629 1.38629 1.38629
14911 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14912 5 0.14968 3.32315 2.76467 3.21947 5 - -
14913 1.38629 1.38629 1.38629 1.38629
14914 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14915 6 3.03132 2.55863 3.08165 0.18819 6 - -
14916 1.38629 1.38629 1.38629 1.38629
14917 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14918 7 2.90726 3.52948 0.12374 3.42820 7 - -
14919 1.38629 1.38629 1.38629 1.38629
14920 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14921 8 2.90726 3.52948 0.12374 3.42820 8 - -
14922 1.38629 1.38629 1.38629 1.38629
14923 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14924 9 0.14968 3.32315 2.76467 3.21947 9 - -
14925 1.38629 1.38629 1.38629 1.38629
14926 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14927 10 3.03132 2.55863 3.08165 0.18819 10 - -
14928 1.38629 1.38629 1.38629 1.38629
14929 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14930 11 3.03132 2.55863 3.08165 0.18819 11 - -
14931 1.38629 1.38629 1.38629 1.38629
14932 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14933 12 3.36719 0.13835 3.41939 2.78075 12 - -
14934 1.38629 1.38629 1.38629 1.38629
14935 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14936 13 3.36719 0.13835 3.41939 2.78075 13 - -
14937 1.38629 1.38629 1.38629 1.38629
14938 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14939 14 2.90726 3.52948 0.12374 3.42820 14 - -
14940 1.38629 1.38629 1.38629 1.38629
14941 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14942 15 3.03132 2.55863 3.08165 0.18819 15 - -
14943 1.38629 1.38629 1.38629 1.38629
14944 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14945 16 3.03132 2.55863 3.08165 0.18819 16 - -
14946 1.38629 1.38629 1.38629 1.38629
14947 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14948 17 3.36719 0.13835 3.41939 2.78075 17 - -
14949 1.38629 1.38629 1.38629 1.38629
14950 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14951 18 3.36719 0.13835 3.41939 2.78075 18 - -
14952 1.38629 1.38629 1.38629 1.38629
14953 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14954 19 3.36719 0.13835 3.41939 2.78075 19 - -
14955 1.38629 1.38629 1.38629 1.38629
14956 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14957 20 2.90726 3.52948 0.12374 3.42820 20 - -
14958 1.38629 1.38629 1.38629 1.38629
14959 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14960 21 2.90726 3.52948 0.12374 3.42820 21 - -
14961 1.38629 1.38629 1.38629 1.38629
14962 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14963 22 0.14968 3.32315 2.76467 3.21947 22 - -
14964 1.38629 1.38629 1.38629 1.38629
14965 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14966 23 3.36719 0.13835 3.41939 2.78075 23 - -
14967 1.38629 1.38629 1.38629 1.38629
14968 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14969 24 3.36719 0.13835 3.41939 2.78075 24 - -
14970 1.38629 1.38629 1.38629 1.38629
14971 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14972 25 0.14968 3.32315 2.76467 3.21947 25 - -
14973 1.38629 1.38629 1.38629 1.38629
14974 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14975 26 3.36719 0.13835 3.41939 2.78075 26 - -
14976 1.38629 1.38629 1.38629 1.38629
14977 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14978 27 2.90726 3.52948 0.12374 3.42820 27 - -
14979 1.38629 1.38629 1.38629 1.38629
14980 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14981 28 3.36719 0.13835 3.41939 2.78075 28 - -
14982 1.38629 1.38629 1.38629 1.38629
14983 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14984 29 3.36719 0.13835 3.41939 2.78075 29 - -
14985 1.38629 1.38629 1.38629 1.38629
14986 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14987 30 3.03132 2.55863 3.08165 0.18819 30 - -
14988 1.38629 1.38629 1.38629 1.38629
14989 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14990 31 2.90726 3.52948 0.12374 3.42820 31 - -
14991 1.38629 1.38629 1.38629 1.38629
14992 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14993 32 2.90726 3.52948 0.12374 3.42820 32 - -
14994 1.38629 1.38629 1.38629 1.38629
14995 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14996 33 3.36719 0.13835 3.41939 2.78075 33 - -
14997 1.38629 1.38629 1.38629 1.38629
14998 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
14999 34 3.03132 2.55863 3.08165 0.18819 34 - -
15000 1.38629 1.38629 1.38629 1.38629
15001 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
15002 35 2.90726 3.52948 0.12374 3.42820 35 - -
15003 1.38629 1.38629 1.38629 1.38629
15004 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
15005 36 0.14968 3.32315 2.76467 3.21947 36 - -
15006 1.38629 1.38629 1.38629 1.38629
15007 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
15008 37 2.90726 3.52948 0.12374 3.42820 37 - -
15009 1.38629 1.38629 1.38629 1.38629
15010 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
15011 38 2.90726 3.52948 0.12374 3.42820 38 - -
15012 1.38629 1.38629 1.38629 1.38629
15013 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
15014 39 2.90726 3.52948 0.12374 3.42820 39 - -
15015 1.38629 1.38629 1.38629 1.38629
15016 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
15017 40 3.03132 2.55863 3.08165 0.18819 40 - -
15018 1.38629 1.38629 1.38629 1.38629
15019 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
15020 41 3.36719 0.13835 3.41939 2.78075 41 - -
15021 1.38629 1.38629 1.38629 1.38629
15022 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
15023 42 2.90726 3.52948 0.12374 3.42820 42 - -
15024 1.38629 1.38629 1.38629 1.38629
15025 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
15026 43 2.90726 3.52948 0.12374 3.42820 43 - -
15027 1.38629 1.38629 1.38629 1.38629
15028 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
15029 44 3.03132 2.55863 3.08165 0.18819 44 - -
15030 1.38629 1.38629 1.38629 1.38629
15031 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
15032 45 0.14968 3.32315 2.76467 3.21947 45 - -
15033 1.38629 1.38629 1.38629 1.38629
15034 0.01923 3.96070 * 1.46634 0.26236 0.00000 *
15035 //
15036 HMMER3/b [3.0 | March 2010]
15037 NAME 3_End_Metazoa_58S_end_seventeenb_long
15038 LENG 45
15039 ALPH DNA
15040 RF no
15041 CS no
15042 MAP yes
15043 DATE Sat Feb 25 14:39:00 2012
15044 NSEQ 5
15045 EFFN 3.159180
15046 CKSUM 1305453752
15047 STATS LOCAL MSV -8.1369 0.71931
15048 STATS LOCAL VITERBI -7.7407 0.71931
15049 STATS LOCAL FORWARD -4.3131 0.71931
15050 HMM A C G T
15051 m->m m->i m->d i->m i->i d->m d->d
15052 COMPO 2.05240 1.20627 1.09569 1.43569
15053 1.38629 1.38629 1.38629 1.38629
15054 0.03803 3.98140 3.98140 1.46634 0.26236 0.00000 *
15055 1 2.90962 3.53288 0.12335 3.43193 1 - -
15056 1.38629 1.38629 1.38629 1.38629
15057 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15058 2 3.03462 2.56074 3.08483 0.18763 2 - -
15059 1.38629 1.38629 1.38629 1.38629
15060 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15061 3 3.37101 0.13787 3.42306 2.78357 3 - -
15062 1.38629 1.38629 1.38629 1.38629
15063 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15064 4 3.37101 0.13787 3.42306 2.78357 4 - -
15065 1.38629 1.38629 1.38629 1.38629
15066 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15067 5 0.14921 3.32646 2.76683 3.22308 5 - -
15068 1.38629 1.38629 1.38629 1.38629
15069 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15070 6 3.03462 2.56074 3.08483 0.18763 6 - -
15071 1.38629 1.38629 1.38629 1.38629
15072 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15073 7 2.90962 3.53288 0.12335 3.43193 7 - -
15074 1.38629 1.38629 1.38629 1.38629
15075 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15076 8 2.90962 3.53288 0.12335 3.43193 8 - -
15077 1.38629 1.38629 1.38629 1.38629
15078 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15079 9 0.14921 3.32646 2.76683 3.22308 9 - -
15080 1.38629 1.38629 1.38629 1.38629
15081 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15082 10 3.03462 2.56074 3.08483 0.18763 10 - -
15083 1.38629 1.38629 1.38629 1.38629
15084 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15085 11 3.03462 2.56074 3.08483 0.18763 11 - -
15086 1.38629 1.38629 1.38629 1.38629
15087 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15088 12 3.37101 0.13787 3.42306 2.78357 12 - -
15089 1.38629 1.38629 1.38629 1.38629
15090 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15091 13 3.37101 0.13787 3.42306 2.78357 13 - -
15092 1.38629 1.38629 1.38629 1.38629
15093 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15094 14 2.90962 3.53288 0.12335 3.43193 14 - -
15095 1.38629 1.38629 1.38629 1.38629
15096 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15097 15 3.03462 2.56074 3.08483 0.18763 15 - -
15098 1.38629 1.38629 1.38629 1.38629
15099 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15100 16 3.03462 2.56074 3.08483 0.18763 16 - -
15101 1.38629 1.38629 1.38629 1.38629
15102 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15103 17 3.37101 0.13787 3.42306 2.78357 17 - -
15104 1.38629 1.38629 1.38629 1.38629
15105 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15106 18 3.37101 0.13787 3.42306 2.78357 18 - -
15107 1.38629 1.38629 1.38629 1.38629
15108 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15109 19 3.37101 0.13787 3.42306 2.78357 19 - -
15110 1.38629 1.38629 1.38629 1.38629
15111 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15112 20 2.90962 3.53288 0.12335 3.43193 20 - -
15113 1.38629 1.38629 1.38629 1.38629
15114 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15115 21 2.90962 3.53288 0.12335 3.43193 21 - -
15116 1.38629 1.38629 1.38629 1.38629
15117 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15118 22 2.90962 3.53288 0.12335 3.43193 22 - -
15119 1.38629 1.38629 1.38629 1.38629
15120 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15121 23 3.37101 0.13787 3.42306 2.78357 23 - -
15122 1.38629 1.38629 1.38629 1.38629
15123 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15124 24 3.37101 0.13787 3.42306 2.78357 24 - -
15125 1.38629 1.38629 1.38629 1.38629
15126 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15127 25 0.14921 3.32646 2.76683 3.22308 25 - -
15128 1.38629 1.38629 1.38629 1.38629
15129 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15130 26 3.37101 0.13787 3.42306 2.78357 26 - -
15131 1.38629 1.38629 1.38629 1.38629
15132 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15133 27 2.90962 3.53288 0.12335 3.43193 27 - -
15134 1.38629 1.38629 1.38629 1.38629
15135 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15136 28 3.03462 2.56074 3.08483 0.18763 28 - -
15137 1.38629 1.38629 1.38629 1.38629
15138 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15139 29 3.37101 0.13787 3.42306 2.78357 29 - -
15140 1.38629 1.38629 1.38629 1.38629
15141 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15142 30 3.03462 2.56074 3.08483 0.18763 30 - -
15143 1.38629 1.38629 1.38629 1.38629
15144 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15145 31 2.90962 3.53288 0.12335 3.43193 31 - -
15146 1.38629 1.38629 1.38629 1.38629
15147 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15148 32 2.90962 3.53288 0.12335 3.43193 32 - -
15149 1.38629 1.38629 1.38629 1.38629
15150 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15151 33 3.37101 0.13787 3.42306 2.78357 33 - -
15152 1.38629 1.38629 1.38629 1.38629
15153 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15154 34 3.03462 2.56074 3.08483 0.18763 34 - -
15155 1.38629 1.38629 1.38629 1.38629
15156 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15157 35 2.90962 3.53288 0.12335 3.43193 35 - -
15158 1.38629 1.38629 1.38629 1.38629
15159 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15160 36 0.14921 3.32646 2.76683 3.22308 36 - -
15161 1.38629 1.38629 1.38629 1.38629
15162 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15163 37 2.90962 3.53288 0.12335 3.43193 37 - -
15164 1.38629 1.38629 1.38629 1.38629
15165 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15166 38 2.90962 3.53288 0.12335 3.43193 38 - -
15167 1.38629 1.38629 1.38629 1.38629
15168 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15169 39 2.90962 3.53288 0.12335 3.43193 39 - -
15170 1.38629 1.38629 1.38629 1.38629
15171 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15172 40 3.03462 2.56074 3.08483 0.18763 40 - -
15173 1.38629 1.38629 1.38629 1.38629
15174 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15175 41 3.37101 0.13787 3.42306 2.78357 41 - -
15176 1.38629 1.38629 1.38629 1.38629
15177 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15178 42 2.90962 3.53288 0.12335 3.43193 42 - -
15179 1.38629 1.38629 1.38629 1.38629
15180 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15181 43 2.90962 3.53288 0.12335 3.43193 43 - -
15182 1.38629 1.38629 1.38629 1.38629
15183 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15184 44 3.37101 0.13787 3.42306 2.78357 44 - -
15185 1.38629 1.38629 1.38629 1.38629
15186 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547
15187 45 3.03462 2.56074 3.08483 0.18763 45 - -
15188 1.38629 1.38629 1.38629 1.38629
15189 0.01920 3.96256 * 1.46634 0.26236 0.00000 *
15190 //
15191 HMMER3/b [3.0 | March 2010]
15192 NAME 3_End_Metazoa_58S_end_seventeenc_long
15193 LENG 45
15194 ALPH DNA
15195 RF no
15196 CS no
15197 MAP yes
15198 DATE Sat Feb 25 14:39:08 2012
15199 NSEQ 4
15200 EFFN 3.292969
15201 CKSUM 3685436907
15202 STATS LOCAL MSV -7.9887 0.71931
15203 STATS LOCAL VITERBI -7.7418 0.71931
15204 STATS LOCAL FORWARD -3.9482 0.71931
15205 HMM A C G T
15206 m->m m->i m->d i->m i->i d->m d->d
15207 COMPO 1.80736 1.13130 1.19594 1.55647
15208 1.38629 1.38629 1.38629 1.38629
15209 0.03709 4.00605 4.00605 1.46634 0.26236 0.00000 *
15210 1 2.94085 3.57805 0.11823 3.48171 1 - -
15211 1.38629 1.38629 1.38629 1.38629
15212 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15213 2 3.07897 2.58901 3.12749 0.18024 2 - -
15214 1.38629 1.38629 1.38629 1.38629
15215 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15216 3 3.42209 0.13153 3.47201 2.82097 3 - -
15217 1.38629 1.38629 1.38629 1.38629
15218 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15219 4 3.42209 0.13153 3.47201 2.82097 4 - -
15220 1.38629 1.38629 1.38629 1.38629
15221 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15222 5 3.07897 2.58901 3.12749 0.18024 5 - -
15223 1.38629 1.38629 1.38629 1.38629
15224 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15225 6 3.07897 2.58901 3.12749 0.18024 6 - -
15226 1.38629 1.38629 1.38629 1.38629
15227 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15228 7 2.94085 3.57805 0.11823 3.48171 7 - -
15229 1.38629 1.38629 1.38629 1.38629
15230 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15231 8 2.94085 3.57805 0.11823 3.48171 8 - -
15232 1.38629 1.38629 1.38629 1.38629
15233 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15234 9 0.14316 3.37070 2.79571 3.27146 9 - -
15235 1.38629 1.38629 1.38629 1.38629
15236 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15237 10 3.07897 2.58901 3.12749 0.18024 10 - -
15238 1.38629 1.38629 1.38629 1.38629
15239 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15240 11 3.07897 2.58901 3.12749 0.18024 11 - -
15241 1.38629 1.38629 1.38629 1.38629
15242 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15243 12 3.42209 0.13153 3.47201 2.82097 12 - -
15244 1.38629 1.38629 1.38629 1.38629
15245 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15246 13 3.42209 0.13153 3.47201 2.82097 13 - -
15247 1.38629 1.38629 1.38629 1.38629
15248 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15249 14 0.14316 3.37070 2.79571 3.27146 14 - -
15250 1.38629 1.38629 1.38629 1.38629
15251 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15252 15 0.14316 3.37070 2.79571 3.27146 15 - -
15253 1.38629 1.38629 1.38629 1.38629
15254 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15255 16 3.07897 2.58901 3.12749 0.18024 16 - -
15256 1.38629 1.38629 1.38629 1.38629
15257 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15258 17 3.42209 0.13153 3.47201 2.82097 17 - -
15259 1.38629 1.38629 1.38629 1.38629
15260 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15261 18 3.42209 0.13153 3.47201 2.82097 18 - -
15262 1.38629 1.38629 1.38629 1.38629
15263 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15264 19 3.42209 0.13153 3.47201 2.82097 19 - -
15265 1.38629 1.38629 1.38629 1.38629
15266 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15267 20 2.94085 3.57805 0.11823 3.48171 20 - -
15268 1.38629 1.38629 1.38629 1.38629
15269 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15270 21 2.94085 3.57805 0.11823 3.48171 21 - -
15271 1.38629 1.38629 1.38629 1.38629
15272 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15273 22 0.14316 3.37070 2.79571 3.27146 22 - -
15274 1.38629 1.38629 1.38629 1.38629
15275 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15276 23 3.42209 0.13153 3.47201 2.82097 23 - -
15277 1.38629 1.38629 1.38629 1.38629
15278 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15279 24 3.42209 0.13153 3.47201 2.82097 24 - -
15280 1.38629 1.38629 1.38629 1.38629
15281 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15282 25 0.14316 3.37070 2.79571 3.27146 25 - -
15283 1.38629 1.38629 1.38629 1.38629
15284 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15285 26 3.42209 0.13153 3.47201 2.82097 26 - -
15286 1.38629 1.38629 1.38629 1.38629
15287 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15288 27 2.94085 3.57805 0.11823 3.48171 27 - -
15289 1.38629 1.38629 1.38629 1.38629
15290 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15291 28 3.42209 0.13153 3.47201 2.82097 28 - -
15292 1.38629 1.38629 1.38629 1.38629
15293 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15294 29 3.42209 0.13153 3.47201 2.82097 29 - -
15295 1.38629 1.38629 1.38629 1.38629
15296 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15297 30 3.07897 2.58901 3.12749 0.18024 30 - -
15298 1.38629 1.38629 1.38629 1.38629
15299 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15300 31 2.94085 3.57805 0.11823 3.48171 31 - -
15301 1.38629 1.38629 1.38629 1.38629
15302 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15303 32 2.94085 3.57805 0.11823 3.48171 32 - -
15304 1.38629 1.38629 1.38629 1.38629
15305 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15306 33 3.42209 0.13153 3.47201 2.82097 33 - -
15307 1.38629 1.38629 1.38629 1.38629
15308 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15309 34 3.07897 2.58901 3.12749 0.18024 34 - -
15310 1.38629 1.38629 1.38629 1.38629
15311 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15312 35 2.94085 3.57805 0.11823 3.48171 35 - -
15313 1.38629 1.38629 1.38629 1.38629
15314 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15315 36 0.14316 3.37070 2.79571 3.27146 36 - -
15316 1.38629 1.38629 1.38629 1.38629
15317 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15318 37 2.94085 3.57805 0.11823 3.48171 37 - -
15319 1.38629 1.38629 1.38629 1.38629
15320 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15321 38 2.94085 3.57805 0.11823 3.48171 38 - -
15322 1.38629 1.38629 1.38629 1.38629
15323 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15324 39 2.94085 3.57805 0.11823 3.48171 39 - -
15325 1.38629 1.38629 1.38629 1.38629
15326 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15327 40 3.07897 2.58901 3.12749 0.18024 40 - -
15328 1.38629 1.38629 1.38629 1.38629
15329 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15330 41 3.42209 0.13153 3.47201 2.82097 41 - -
15331 1.38629 1.38629 1.38629 1.38629
15332 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15333 42 2.94085 3.57805 0.11823 3.48171 42 - -
15334 1.38629 1.38629 1.38629 1.38629
15335 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15336 43 2.94085 3.57805 0.11823 3.48171 43 - -
15337 1.38629 1.38629 1.38629 1.38629
15338 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15339 44 3.42209 0.13153 3.47201 2.82097 44 - -
15340 1.38629 1.38629 1.38629 1.38629
15341 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
15342 45 1.43147 1.00912 2.06421 1.31088 45 - -
15343 1.38629 1.38629 1.38629 1.38629
15344 0.01872 3.98768 * 1.46634 0.26236 0.00000 *
15345 //
15346 HMMER3/b [3.0 | March 2010]
15347 NAME 3_End_Metazoa_58S_end_seventeend_long
15348 LENG 45
15349 ALPH DNA
15350 RF no
15351 CS no
15352 MAP yes
15353 DATE Sat Feb 25 14:39:13 2012
15354 NSEQ 23
15355 EFFN 3.220337
15356 CKSUM 3706857204
15357 STATS LOCAL MSV -8.1343 0.71932
15358 STATS LOCAL VITERBI -7.5910 0.71932
15359 STATS LOCAL FORWARD -4.0166 0.71932
15360 HMM A C G T
15361 m->m m->i m->d i->m i->i d->m d->d
15362 COMPO 1.93028 1.09417 1.09232 1.68936
15363 1.38629 1.38629 1.38629 1.38629
15364 0.03760 3.99274 3.99274 1.46634 0.26236 0.00000 *
15365 1 2.92413 3.55382 0.12094 3.45500 1 - -
15366 1.38629 1.38629 1.38629 1.38629
15367 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15368 2 3.39466 0.13489 3.44573 2.80092 2 - -
15369 1.38629 1.38629 1.38629 1.38629
15370 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15371 3 3.39466 0.13489 3.44573 2.80092 3 - -
15372 1.38629 1.38629 1.38629 1.38629
15373 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15374 4 3.39466 0.13489 3.44573 2.80092 4 - -
15375 1.38629 1.38629 1.38629 1.38629
15376 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15377 5 0.14638 3.34693 2.78022 3.24546 5 - -
15378 1.38629 1.38629 1.38629 1.38629
15379 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15380 6 3.39466 0.13489 3.44573 2.80092 6 - -
15381 1.38629 1.38629 1.38629 1.38629
15382 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15383 7 2.92413 3.55382 0.12094 3.45500 7 - -
15384 1.38629 1.38629 1.38629 1.38629
15385 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15386 8 2.92413 3.55382 0.12094 3.45500 8 - -
15387 1.38629 1.38629 1.38629 1.38629
15388 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15389 9 0.14638 3.34693 2.78022 3.24546 9 - -
15390 1.38629 1.38629 1.38629 1.38629
15391 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15392 10 3.05509 2.57380 3.10452 0.18418 10 - -
15393 1.38629 1.38629 1.38629 1.38629
15394 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15395 11 3.05509 2.57380 3.10452 0.18418 11 - -
15396 1.38629 1.38629 1.38629 1.38629
15397 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15398 12 3.39466 0.13489 3.44573 2.80092 12 - -
15399 1.38629 1.38629 1.38629 1.38629
15400 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15401 13 3.05509 2.57380 3.10452 0.18418 13 - -
15402 1.38629 1.38629 1.38629 1.38629
15403 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15404 14 2.92413 3.55382 0.12094 3.45500 14 - -
15405 1.38629 1.38629 1.38629 1.38629
15406 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15407 15 2.43346 1.22010 2.50389 0.62493 15 - -
15408 1.38629 1.38629 1.38629 1.38629
15409 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15410 16 3.05509 2.57380 3.10452 0.18418 16 - -
15411 1.38629 1.38629 1.38629 1.38629
15412 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15413 17 3.39466 0.13489 3.44573 2.80092 17 - -
15414 1.38629 1.38629 1.38629 1.38629
15415 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15416 18 3.39466 0.13489 3.44573 2.80092 18 - -
15417 1.38629 1.38629 1.38629 1.38629
15418 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15419 19 3.39466 0.13489 3.44573 2.80092 19 - -
15420 1.38629 1.38629 1.38629 1.38629
15421 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15422 20 2.92413 3.55382 0.12094 3.45500 20 - -
15423 1.38629 1.38629 1.38629 1.38629
15424 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15425 21 2.92413 3.55382 0.12094 3.45500 21 - -
15426 1.38629 1.38629 1.38629 1.38629
15427 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15428 22 2.92413 3.55382 0.12094 3.45500 22 - -
15429 1.38629 1.38629 1.38629 1.38629
15430 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15431 23 3.04500 0.22727 3.10593 2.19896 23 - -
15432 1.38629 1.38629 1.38629 1.38629
15433 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15434 24 3.05509 2.57380 3.10452 0.18418 24 - -
15435 1.38629 1.38629 1.38629 1.38629
15436 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15437 25 0.14638 3.34693 2.78022 3.24546 25 - -
15438 1.38629 1.38629 1.38629 1.38629
15439 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15440 26 3.39466 0.13489 3.44573 2.80092 26 - -
15441 1.38629 1.38629 1.38629 1.38629
15442 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15443 27 2.92413 3.55382 0.12094 3.45500 27 - -
15444 1.38629 1.38629 1.38629 1.38629
15445 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15446 28 3.39466 0.13489 3.44573 2.80092 28 - -
15447 1.38629 1.38629 1.38629 1.38629
15448 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15449 29 3.39466 0.13489 3.44573 2.80092 29 - -
15450 1.38629 1.38629 1.38629 1.38629
15451 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15452 30 3.05509 2.57380 3.10452 0.18418 30 - -
15453 1.38629 1.38629 1.38629 1.38629
15454 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15455 31 2.92413 3.55382 0.12094 3.45500 31 - -
15456 1.38629 1.38629 1.38629 1.38629
15457 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15458 32 2.92413 3.55382 0.12094 3.45500 32 - -
15459 1.38629 1.38629 1.38629 1.38629
15460 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15461 33 3.39466 0.13489 3.44573 2.80092 33 - -
15462 1.38629 1.38629 1.38629 1.38629
15463 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15464 34 3.05509 2.57380 3.10452 0.18418 34 - -
15465 1.38629 1.38629 1.38629 1.38629
15466 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15467 35 2.92413 3.55382 0.12094 3.45500 35 - -
15468 1.38629 1.38629 1.38629 1.38629
15469 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15470 36 0.14638 3.34693 2.78022 3.24546 36 - -
15471 1.38629 1.38629 1.38629 1.38629
15472 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15473 37 2.92413 3.55382 0.12094 3.45500 37 - -
15474 1.38629 1.38629 1.38629 1.38629
15475 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15476 38 2.92413 3.55382 0.12094 3.45500 38 - -
15477 1.38629 1.38629 1.38629 1.38629
15478 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15479 39 2.92413 3.55382 0.12094 3.45500 39 - -
15480 1.38629 1.38629 1.38629 1.38629
15481 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15482 40 3.39466 0.13489 3.44573 2.80092 40 - -
15483 1.38629 1.38629 1.38629 1.38629
15484 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15485 41 3.39466 0.13489 3.44573 2.80092 41 - -
15486 1.38629 1.38629 1.38629 1.38629
15487 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15488 42 2.92413 3.55382 0.12094 3.45500 42 - -
15489 1.38629 1.38629 1.38629 1.38629
15490 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15491 43 2.92413 3.55382 0.12094 3.45500 43 - -
15492 1.38629 1.38629 1.38629 1.38629
15493 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15494 44 3.39466 0.13489 3.44573 2.80092 44 - -
15495 1.38629 1.38629 1.38629 1.38629
15496 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547
15497 45 0.14638 3.34693 2.78022 3.24546 45 - -
15498 1.38629 1.38629 1.38629 1.38629
15499 0.01897 3.97412 * 1.46634 0.26236 0.00000 *
15500 //
15501 HMMER3/b [3.0 | March 2010]
15502 NAME 3_End_Metazoa_58S_end_six_long
15503 LENG 45
15504 ALPH DNA
15505 RF no
15506 CS no
15507 MAP yes
15508 DATE Sat Feb 25 14:34:38 2012
15509 NSEQ 7
15510 EFFN 4.125488
15511 CKSUM 1937543874
15512 STATS LOCAL MSV -6.8330 0.71932
15513 STATS LOCAL VITERBI -7.8147 0.71932
15514 STATS LOCAL FORWARD -4.0567 0.71932
15515 HMM A C G T
15516 m->m m->i m->d i->m i->i d->m d->d
15517 COMPO 1.67777 1.45561 1.28397 1.19397
15518 1.38629 1.38629 1.38629 1.38629
15519 0.03213 4.14717 4.14717 1.46634 0.26236 0.00000 *
15520 1 2.18378 0.82140 1.13155 2.07917 1 - -
15521 1.38629 1.38629 1.38629 1.38629
15522 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15523 2 3.09938 3.81164 0.09533 3.74056 2 - -
15524 1.38629 1.38629 1.38629 1.38629
15525 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15526 3 3.69079 0.10326 3.72867 3.01331 3 - -
15527 1.38629 1.38629 1.38629 1.38629
15528 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15529 4 0.11535 3.60610 2.94734 3.52987 4 - -
15530 1.38629 1.38629 1.38629 1.38629
15531 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15532 5 3.32274 2.74372 3.36174 0.14509 5 - -
15533 1.38629 1.38629 1.38629 1.38629
15534 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15535 6 3.32274 2.74372 3.36174 0.14509 6 - -
15536 1.38629 1.38629 1.38629 1.38629
15537 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15538 7 3.09938 3.81164 0.09533 3.74056 7 - -
15539 1.38629 1.38629 1.38629 1.38629
15540 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15541 8 1.53355 2.90664 0.40474 2.77383 8 - -
15542 1.38629 1.38629 1.38629 1.38629
15543 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15544 9 3.09938 3.81164 0.09533 3.74056 9 - -
15545 1.38629 1.38629 1.38629 1.38629
15546 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15547 10 3.09938 3.81164 0.09533 3.74056 10 - -
15548 1.38629 1.38629 1.38629 1.38629
15549 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15550 11 3.32274 2.74372 3.36174 0.14509 11 - -
15551 1.38629 1.38629 1.38629 1.38629
15552 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15553 12 3.69079 0.10326 3.72867 3.01331 12 - -
15554 1.38629 1.38629 1.38629 1.38629
15555 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15556 13 0.11535 3.60610 2.94734 3.52987 13 - -
15557 1.38629 1.38629 1.38629 1.38629
15558 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15559 14 0.11535 3.60610 2.94734 3.52987 14 - -
15560 1.38629 1.38629 1.38629 1.38629
15561 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15562 15 0.11535 3.60610 2.94734 3.52987 15 - -
15563 1.38629 1.38629 1.38629 1.38629
15564 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15565 16 3.69079 0.10326 3.72867 3.01331 16 - -
15566 1.38629 1.38629 1.38629 1.38629
15567 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15568 17 2.72481 0.47283 2.79340 1.38632 17 - -
15569 1.38629 1.38629 1.38629 1.38629
15570 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15571 18 3.69079 0.10326 3.72867 3.01331 18 - -
15572 1.38629 1.38629 1.38629 1.38629
15573 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15574 19 3.32274 2.74372 3.36174 0.14509 19 - -
15575 1.38629 1.38629 1.38629 1.38629
15576 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15577 20 3.32274 2.74372 3.36174 0.14509 20 - -
15578 1.38629 1.38629 1.38629 1.38629
15579 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15580 21 3.32274 2.74372 3.36174 0.14509 21 - -
15581 1.38629 1.38629 1.38629 1.38629
15582 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15583 22 3.09938 3.81164 0.09533 3.74056 22 - -
15584 1.38629 1.38629 1.38629 1.38629
15585 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15586 23 2.18378 0.82140 1.13155 2.07917 23 - -
15587 1.38629 1.38629 1.38629 1.38629
15588 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15589 24 1.32958 1.10724 2.12400 1.25389 24 - -
15590 1.38629 1.38629 1.38629 1.38629
15591 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15592 25 0.11535 3.60610 2.94734 3.52987 25 - -
15593 1.38629 1.38629 1.38629 1.38629
15594 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15595 26 3.69079 0.10326 3.72867 3.01331 26 - -
15596 1.38629 1.38629 1.38629 1.38629
15597 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15598 27 3.09938 3.81164 0.09533 3.74056 27 - -
15599 1.38629 1.38629 1.38629 1.38629
15600 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15601 28 3.32274 2.74372 3.36174 0.14509 28 - -
15602 1.38629 1.38629 1.38629 1.38629
15603 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15604 29 3.69079 0.10326 3.72867 3.01331 29 - -
15605 1.38629 1.38629 1.38629 1.38629
15606 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15607 30 3.32274 2.74372 3.36174 0.14509 30 - -
15608 1.38629 1.38629 1.38629 1.38629
15609 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15610 31 3.09938 3.81164 0.09533 3.74056 31 - -
15611 1.38629 1.38629 1.38629 1.38629
15612 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15613 32 3.09938 3.81164 0.09533 3.74056 32 - -
15614 1.38629 1.38629 1.38629 1.38629
15615 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15616 33 3.32274 2.74372 3.36174 0.14509 33 - -
15617 1.38629 1.38629 1.38629 1.38629
15618 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15619 34 3.32274 2.74372 3.36174 0.14509 34 - -
15620 1.38629 1.38629 1.38629 1.38629
15621 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15622 35 3.69079 0.10326 3.72867 3.01331 35 - -
15623 1.38629 1.38629 1.38629 1.38629
15624 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15625 36 0.11535 3.60610 2.94734 3.52987 36 - -
15626 1.38629 1.38629 1.38629 1.38629
15627 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15628 37 3.09938 3.81164 0.09533 3.74056 37 - -
15629 1.38629 1.38629 1.38629 1.38629
15630 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15631 38 3.09938 3.81164 0.09533 3.74056 38 - -
15632 1.38629 1.38629 1.38629 1.38629
15633 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15634 39 3.09938 3.81164 0.09533 3.74056 39 - -
15635 1.38629 1.38629 1.38629 1.38629
15636 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15637 40 3.32274 2.74372 3.36174 0.14509 40 - -
15638 1.38629 1.38629 1.38629 1.38629
15639 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15640 41 3.69079 0.10326 3.72867 3.01331 41 - -
15641 1.38629 1.38629 1.38629 1.38629
15642 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15643 42 0.11535 3.60610 2.94734 3.52987 42 - -
15644 1.38629 1.38629 1.38629 1.38629
15645 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15646 43 3.32274 2.74372 3.36174 0.14509 43 - -
15647 1.38629 1.38629 1.38629 1.38629
15648 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15649 44 3.32274 2.74372 3.36174 0.14509 44 - -
15650 1.38629 1.38629 1.38629 1.38629
15651 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547
15652 45 3.32274 2.74372 3.36174 0.14509 45 - -
15653 1.38629 1.38629 1.38629 1.38629
15654 0.01619 4.13124 * 1.46634 0.26236 0.00000 *
15655 //
15656 HMMER3/b [3.0 | March 2010]
15657 NAME 3_End_Metazoa_58S_end_sixteen_long
15658 LENG 45
15659 ALPH DNA
15660 RF no
15661 CS no
15662 MAP yes
15663 DATE Sat Feb 25 14:38:42 2012
15664 NSEQ 4
15665 EFFN 3.863281
15666 CKSUM 3845133886
15667 STATS LOCAL MSV -7.4397 0.71932
15668 STATS LOCAL VITERBI -7.7016 0.71932
15669 STATS LOCAL FORWARD -4.3099 0.71932
15670 HMM A C G T
15671 m->m m->i m->d i->m i->i d->m d->d
15672 COMPO 1.45009 1.98350 1.27374 1.05532
15673 1.38629 1.38629 1.38629 1.38629
15674 0.03354 4.10484 4.10484 1.46634 0.26236 0.00000 *
15675 1 0.92184 1.01208 2.20162 2.05472 1 - -
15676 1.38629 1.38629 1.38629 1.38629
15677 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15678 2 3.25155 2.69851 3.29336 0.15449 2 - -
15679 1.38629 1.38629 1.38629 1.38629
15680 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15681 3 3.25155 2.69851 3.29336 0.15449 3 - -
15682 1.38629 1.38629 1.38629 1.38629
15683 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15684 4 3.05513 3.74598 0.10122 3.66762 4 - -
15685 1.38629 1.38629 1.38629 1.38629
15686 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15687 5 0.95536 2.21103 2.22862 0.92115 5 - -
15688 1.38629 1.38629 1.38629 1.38629
15689 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15690 6 3.25155 2.69851 3.29336 0.15449 6 - -
15691 1.38629 1.38629 1.38629 1.38629
15692 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15693 7 3.25155 2.69851 3.29336 0.15449 7 - -
15694 1.38629 1.38629 1.38629 1.38629
15695 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15696 8 3.25155 2.69851 3.29336 0.15449 8 - -
15697 1.38629 1.38629 1.38629 1.38629
15698 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15699 9 0.12263 3.53873 2.90407 3.45579 9 - -
15700 1.38629 1.38629 1.38629 1.38629
15701 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15702 10 0.12263 3.53873 2.90407 3.45579 10 - -
15703 1.38629 1.38629 1.38629 1.38629
15704 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15705 11 0.84088 2.60316 0.89347 2.46045 11 - -
15706 1.38629 1.38629 1.38629 1.38629
15707 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15708 12 0.12263 3.53873 2.90407 3.45579 12 - -
15709 1.38629 1.38629 1.38629 1.38629
15710 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15711 13 3.25155 2.69851 3.29336 0.15449 13 - -
15712 1.38629 1.38629 1.38629 1.38629
15713 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15714 14 3.61457 0.11050 3.65599 2.95937 14 - -
15715 1.38629 1.38629 1.38629 1.38629
15716 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15717 15 3.25155 2.69851 3.29336 0.15449 15 - -
15718 1.38629 1.38629 1.38629 1.38629
15719 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15720 16 3.05513 3.74598 0.10122 3.66762 16 - -
15721 1.38629 1.38629 1.38629 1.38629
15722 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15723 17 3.25155 2.69851 3.29336 0.15449 17 - -
15724 1.38629 1.38629 1.38629 1.38629
15725 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15726 18 3.05513 3.74598 0.10122 3.66762 18 - -
15727 1.38629 1.38629 1.38629 1.38629
15728 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15729 19 3.25155 2.69851 3.29336 0.15449 19 - -
15730 1.38629 1.38629 1.38629 1.38629
15731 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15732 20 3.05513 3.74598 0.10122 3.66762 20 - -
15733 1.38629 1.38629 1.38629 1.38629
15734 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15735 21 0.12263 3.53873 2.90407 3.45579 21 - -
15736 1.38629 1.38629 1.38629 1.38629
15737 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15738 22 3.05513 3.74598 0.10122 3.66762 22 - -
15739 1.38629 1.38629 1.38629 1.38629
15740 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15741 23 3.05513 3.74598 0.10122 3.66762 23 - -
15742 1.38629 1.38629 1.38629 1.38629
15743 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15744 24 3.25155 2.69851 3.29336 0.15449 24 - -
15745 1.38629 1.38629 1.38629 1.38629
15746 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15747 25 0.12263 3.53873 2.90407 3.45579 25 - -
15748 1.38629 1.38629 1.38629 1.38629
15749 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15750 26 3.61457 0.11050 3.65599 2.95937 26 - -
15751 1.38629 1.38629 1.38629 1.38629
15752 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15753 27 0.12263 3.53873 2.90407 3.45579 27 - -
15754 1.38629 1.38629 1.38629 1.38629
15755 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15756 28 3.61457 0.11050 3.65599 2.95937 28 - -
15757 1.38629 1.38629 1.38629 1.38629
15758 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15759 29 0.12263 3.53873 2.90407 3.45579 29 - -
15760 1.38629 1.38629 1.38629 1.38629
15761 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15762 30 3.25155 2.69851 3.29336 0.15449 30 - -
15763 1.38629 1.38629 1.38629 1.38629
15764 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15765 31 3.05513 3.74598 0.10122 3.66762 31 - -
15766 1.38629 1.38629 1.38629 1.38629
15767 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15768 32 3.05513 3.74598 0.10122 3.66762 32 - -
15769 1.38629 1.38629 1.38629 1.38629
15770 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15771 33 3.25155 2.69851 3.29336 0.15449 33 - -
15772 1.38629 1.38629 1.38629 1.38629
15773 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15774 34 3.25155 2.69851 3.29336 0.15449 34 - -
15775 1.38629 1.38629 1.38629 1.38629
15776 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15777 35 3.05513 3.74598 0.10122 3.66762 35 - -
15778 1.38629 1.38629 1.38629 1.38629
15779 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15780 36 0.12263 3.53873 2.90407 3.45579 36 - -
15781 1.38629 1.38629 1.38629 1.38629
15782 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15783 37 3.05513 3.74598 0.10122 3.66762 37 - -
15784 1.38629 1.38629 1.38629 1.38629
15785 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15786 38 3.25155 2.69851 3.29336 0.15449 38 - -
15787 1.38629 1.38629 1.38629 1.38629
15788 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15789 39 3.05513 3.74598 0.10122 3.66762 39 - -
15790 1.38629 1.38629 1.38629 1.38629
15791 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15792 40 3.25155 2.69851 3.29336 0.15449 40 - -
15793 1.38629 1.38629 1.38629 1.38629
15794 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15795 41 3.61457 0.11050 3.65599 2.95937 41 - -
15796 1.38629 1.38629 1.38629 1.38629
15797 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15798 42 3.05513 3.74598 0.10122 3.66762 42 - -
15799 1.38629 1.38629 1.38629 1.38629
15800 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15801 43 3.25155 2.69851 3.29336 0.15449 43 - -
15802 1.38629 1.38629 1.38629 1.38629
15803 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15804 44 3.25155 2.69851 3.29336 0.15449 44 - -
15805 1.38629 1.38629 1.38629 1.38629
15806 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547
15807 45 0.12263 3.53873 2.90407 3.45579 45 - -
15808 1.38629 1.38629 1.38629 1.38629
15809 0.01691 4.08821 * 1.46634 0.26236 0.00000 *
15810 //
15811 HMMER3/b [3.0 | March 2010]
15812 NAME 3_End_Metazoa_58S_end_tena_long
15813 LENG 45
15814 ALPH DNA
15815 RF no
15816 CS no
15817 MAP yes
15818 DATE Sat Feb 25 14:35:44 2012
15819 NSEQ 4
15820 EFFN 3.347656
15821 CKSUM 1138680412
15822 STATS LOCAL MSV -8.0225 0.71931
15823 STATS LOCAL VITERBI -7.7367 0.71931
15824 STATS LOCAL FORWARD -4.2215 0.71931
15825 HMM A C G T
15826 m->m m->i m->d i->m i->i d->m d->d
15827 COMPO 1.54341 1.78944 1.25102 1.09936
15828 1.38629 1.38629 1.38629 1.38629
15829 0.03672 4.01596 4.01596 1.46634 0.26236 0.00000 *
15830 1 0.14085 3.38823 2.80709 3.29064 1 - -
15831 1.38629 1.38629 1.38629 1.38629
15832 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15833 2 3.44228 0.12912 3.49135 2.83567 2 - -
15834 1.38629 1.38629 1.38629 1.38629
15835 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15836 3 3.44228 0.12912 3.49135 2.83567 3 - -
15837 1.38629 1.38629 1.38629 1.38629
15838 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15839 4 0.14085 3.38823 2.80709 3.29064 4 - -
15840 1.38629 1.38629 1.38629 1.38629
15841 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15842 5 0.14085 3.38823 2.80709 3.29064 5 - -
15843 1.38629 1.38629 1.38629 1.38629
15844 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15845 6 3.44228 0.12912 3.49135 2.83567 6 - -
15846 1.38629 1.38629 1.38629 1.38629
15847 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15848 7 0.14085 3.38823 2.80709 3.29064 7 - -
15849 1.38629 1.38629 1.38629 1.38629
15850 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15851 8 2.95307 3.59583 0.11628 3.50134 8 - -
15852 1.38629 1.38629 1.38629 1.38629
15853 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15854 9 2.95307 3.59583 0.11628 3.50134 9 - -
15855 1.38629 1.38629 1.38629 1.38629
15856 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15857 10 3.09665 2.60026 3.14450 0.17739 10 - -
15858 1.38629 1.38629 1.38629 1.38629
15859 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15860 11 3.09665 2.60026 3.14450 0.17739 11 - -
15861 1.38629 1.38629 1.38629 1.38629
15862 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15863 12 3.44228 0.12912 3.49135 2.83567 12 - -
15864 1.38629 1.38629 1.38629 1.38629
15865 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15866 13 0.14085 3.38823 2.80709 3.29064 13 - -
15867 1.38629 1.38629 1.38629 1.38629
15868 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15869 14 3.09665 2.60026 3.14450 0.17739 14 - -
15870 1.38629 1.38629 1.38629 1.38629
15871 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15872 15 0.14085 3.38823 2.80709 3.29064 15 - -
15873 1.38629 1.38629 1.38629 1.38629
15874 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15875 16 3.09665 2.60026 3.14450 0.17739 16 - -
15876 1.38629 1.38629 1.38629 1.38629
15877 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15878 17 3.44228 0.12912 3.49135 2.83567 17 - -
15879 1.38629 1.38629 1.38629 1.38629
15880 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15881 18 3.09665 2.60026 3.14450 0.17739 18 - -
15882 1.38629 1.38629 1.38629 1.38629
15883 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15884 19 2.95307 3.59583 0.11628 3.50134 19 - -
15885 1.38629 1.38629 1.38629 1.38629
15886 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15887 20 3.09665 2.60026 3.14450 0.17739 20 - -
15888 1.38629 1.38629 1.38629 1.38629
15889 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15890 21 3.09665 2.60026 3.14450 0.17739 21 - -
15891 1.38629 1.38629 1.38629 1.38629
15892 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15893 22 2.95307 3.59583 0.11628 3.50134 22 - -
15894 1.38629 1.38629 1.38629 1.38629
15895 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15896 23 2.95307 3.59583 0.11628 3.50134 23 - -
15897 1.38629 1.38629 1.38629 1.38629
15898 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15899 24 3.09665 2.60026 3.14450 0.17739 24 - -
15900 1.38629 1.38629 1.38629 1.38629
15901 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15902 25 0.14085 3.38823 2.80709 3.29064 25 - -
15903 1.38629 1.38629 1.38629 1.38629
15904 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15905 26 3.09665 2.60026 3.14450 0.17739 26 - -
15906 1.38629 1.38629 1.38629 1.38629
15907 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15908 27 2.95307 3.59583 0.11628 3.50134 27 - -
15909 1.38629 1.38629 1.38629 1.38629
15910 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15911 28 3.09665 2.60026 3.14450 0.17739 28 - -
15912 1.38629 1.38629 1.38629 1.38629
15913 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15914 29 3.09665 2.60026 3.14450 0.17739 29 - -
15915 1.38629 1.38629 1.38629 1.38629
15916 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15917 30 3.09665 2.60026 3.14450 0.17739 30 - -
15918 1.38629 1.38629 1.38629 1.38629
15919 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15920 31 2.95307 3.59583 0.11628 3.50134 31 - -
15921 1.38629 1.38629 1.38629 1.38629
15922 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15923 32 2.95307 3.59583 0.11628 3.50134 32 - -
15924 1.38629 1.38629 1.38629 1.38629
15925 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15926 33 3.09665 2.60026 3.14450 0.17739 33 - -
15927 1.38629 1.38629 1.38629 1.38629
15928 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15929 34 3.09665 2.60026 3.14450 0.17739 34 - -
15930 1.38629 1.38629 1.38629 1.38629
15931 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15932 35 2.95307 3.59583 0.11628 3.50134 35 - -
15933 1.38629 1.38629 1.38629 1.38629
15934 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15935 36 0.14085 3.38823 2.80709 3.29064 36 - -
15936 1.38629 1.38629 1.38629 1.38629
15937 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15938 37 2.95307 3.59583 0.11628 3.50134 37 - -
15939 1.38629 1.38629 1.38629 1.38629
15940 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15941 38 2.95307 3.59583 0.11628 3.50134 38 - -
15942 1.38629 1.38629 1.38629 1.38629
15943 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15944 39 2.95307 3.59583 0.11628 3.50134 39 - -
15945 1.38629 1.38629 1.38629 1.38629
15946 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15947 40 3.09665 2.60026 3.14450 0.17739 40 - -
15948 1.38629 1.38629 1.38629 1.38629
15949 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15950 41 3.44228 0.12912 3.49135 2.83567 41 - -
15951 1.38629 1.38629 1.38629 1.38629
15952 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15953 42 2.95307 3.59583 0.11628 3.50134 42 - -
15954 1.38629 1.38629 1.38629 1.38629
15955 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15956 43 0.14085 3.38823 2.80709 3.29064 43 - -
15957 1.38629 1.38629 1.38629 1.38629
15958 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15959 44 3.09665 2.60026 3.14450 0.17739 44 - -
15960 1.38629 1.38629 1.38629 1.38629
15961 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547
15962 45 3.09665 2.60026 3.14450 0.17739 45 - -
15963 1.38629 1.38629 1.38629 1.38629
15964 0.01853 3.99777 * 1.46634 0.26236 0.00000 *
15965 //
15966 HMMER3/b [3.0 | March 2010]
15967 NAME 3_End_Metazoa_58S_end_tenb_long
15968 LENG 45
15969 ALPH DNA
15970 RF no
15971 CS no
15972 MAP yes
15973 DATE Sat Feb 25 14:35:50 2012
15974 NSEQ 15
15975 EFFN 3.541260
15976 CKSUM 743970875
15977 STATS LOCAL MSV -7.2652 0.71932
15978 STATS LOCAL VITERBI -7.7504 0.71932
15979 STATS LOCAL FORWARD -4.0818 0.71932
15980 HMM A C G T
15981 m->m m->i m->d i->m i->i d->m d->d
15982 COMPO 1.47399 1.99837 1.30389 1.01071
15983 1.38629 1.38629 1.38629 1.38629
15984 0.03546 4.05026 4.05026 1.46634 0.26236 0.00000 *
15985 1 0.13330 3.44776 2.84559 3.35589 1 - -
15986 1.38629 1.38629 1.38629 1.38629
15987 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
15988 2 3.51070 0.12132 3.55681 2.88515 2 - -
15989 1.38629 1.38629 1.38629 1.38629
15990 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
15991 3 3.15726 2.63874 3.20277 0.16800 3 - -
15992 1.38629 1.38629 1.38629 1.38629
15993 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
15994 4 0.13330 3.44776 2.84559 3.35589 4 - -
15995 1.38629 1.38629 1.38629 1.38629
15996 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
15997 5 3.15726 2.63874 3.20277 0.16800 5 - -
15998 1.38629 1.38629 1.38629 1.38629
15999 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16000 6 3.51070 0.12132 3.55681 2.88515 6 - -
16001 1.38629 1.38629 1.38629 1.38629
16002 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16003 7 0.25186 3.06981 2.08699 2.95350 7 - -
16004 1.38629 1.38629 1.38629 1.38629
16005 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16006 8 2.99404 3.65578 0.10998 3.56762 8 - -
16007 1.38629 1.38629 1.38629 1.38629
16008 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16009 9 2.99404 3.65578 0.10998 3.56762 9 - -
16010 1.38629 1.38629 1.38629 1.38629
16011 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16012 10 3.15726 2.63874 3.20277 0.16800 10 - -
16013 1.38629 1.38629 1.38629 1.38629
16014 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16015 11 3.15726 2.63874 3.20277 0.16800 11 - -
16016 1.38629 1.38629 1.38629 1.38629
16017 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16018 12 3.15726 2.63874 3.20277 0.16800 12 - -
16019 1.38629 1.38629 1.38629 1.38629
16020 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16021 13 0.13330 3.44776 2.84559 3.35589 13 - -
16022 1.38629 1.38629 1.38629 1.38629
16023 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16024 14 3.15726 2.63874 3.20277 0.16800 14 - -
16025 1.38629 1.38629 1.38629 1.38629
16026 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16027 15 0.13330 3.44776 2.84559 3.35589 15 - -
16028 1.38629 1.38629 1.38629 1.38629
16029 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16030 16 3.15726 2.63874 3.20277 0.16800 16 - -
16031 1.38629 1.38629 1.38629 1.38629
16032 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16033 17 3.51070 0.12132 3.55681 2.88515 17 - -
16034 1.38629 1.38629 1.38629 1.38629
16035 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16036 18 3.15726 2.63874 3.20277 0.16800 18 - -
16037 1.38629 1.38629 1.38629 1.38629
16038 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16039 19 2.99404 3.65578 0.10998 3.56762 19 - -
16040 1.38629 1.38629 1.38629 1.38629
16041 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16042 20 0.13330 3.44776 2.84559 3.35589 20 - -
16043 1.38629 1.38629 1.38629 1.38629
16044 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16045 21 3.15726 2.63874 3.20277 0.16800 21 - -
16046 1.38629 1.38629 1.38629 1.38629
16047 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16048 22 0.13330 3.44776 2.84559 3.35589 22 - -
16049 1.38629 1.38629 1.38629 1.38629
16050 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16051 23 2.99404 3.65578 0.10998 3.56762 23 - -
16052 1.38629 1.38629 1.38629 1.38629
16053 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16054 24 3.15726 2.63874 3.20277 0.16800 24 - -
16055 1.38629 1.38629 1.38629 1.38629
16056 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16057 25 0.13330 3.44776 2.84559 3.35589 25 - -
16058 1.38629 1.38629 1.38629 1.38629
16059 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16060 26 3.15726 2.63874 3.20277 0.16800 26 - -
16061 1.38629 1.38629 1.38629 1.38629
16062 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16063 27 2.99404 3.65578 0.10998 3.56762 27 - -
16064 1.38629 1.38629 1.38629 1.38629
16065 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16066 28 3.15726 2.63874 3.20277 0.16800 28 - -
16067 1.38629 1.38629 1.38629 1.38629
16068 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16069 29 3.15726 2.63874 3.20277 0.16800 29 - -
16070 1.38629 1.38629 1.38629 1.38629
16071 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16072 30 3.15726 2.63874 3.20277 0.16800 30 - -
16073 1.38629 1.38629 1.38629 1.38629
16074 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16075 31 2.99404 3.65578 0.10998 3.56762 31 - -
16076 1.38629 1.38629 1.38629 1.38629
16077 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16078 32 2.99404 3.65578 0.10998 3.56762 32 - -
16079 1.38629 1.38629 1.38629 1.38629
16080 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16081 33 3.15726 2.63874 3.20277 0.16800 33 - -
16082 1.38629 1.38629 1.38629 1.38629
16083 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16084 34 3.15726 2.63874 3.20277 0.16800 34 - -
16085 1.38629 1.38629 1.38629 1.38629
16086 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16087 35 2.99404 3.65578 0.10998 3.56762 35 - -
16088 1.38629 1.38629 1.38629 1.38629
16089 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16090 36 0.13330 3.44776 2.84559 3.35589 36 - -
16091 1.38629 1.38629 1.38629 1.38629
16092 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16093 37 2.99404 3.65578 0.10998 3.56762 37 - -
16094 1.38629 1.38629 1.38629 1.38629
16095 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16096 38 2.99404 3.65578 0.10998 3.56762 38 - -
16097 1.38629 1.38629 1.38629 1.38629
16098 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16099 39 2.99404 3.65578 0.10998 3.56762 39 - -
16100 1.38629 1.38629 1.38629 1.38629
16101 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16102 40 3.15726 2.63874 3.20277 0.16800 40 - -
16103 1.38629 1.38629 1.38629 1.38629
16104 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16105 41 3.51070 0.12132 3.55681 2.88515 41 - -
16106 1.38629 1.38629 1.38629 1.38629
16107 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16108 42 2.99404 3.65578 0.10998 3.56762 42 - -
16109 1.38629 1.38629 1.38629 1.38629
16110 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16111 43 0.13330 3.44776 2.84559 3.35589 43 - -
16112 1.38629 1.38629 1.38629 1.38629
16113 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16114 44 2.63026 1.53163 2.69540 0.43968 44 - -
16115 1.38629 1.38629 1.38629 1.38629
16116 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547
16117 45 3.15726 2.63874 3.20277 0.16800 45 - -
16118 1.38629 1.38629 1.38629 1.38629
16119 0.01789 4.03269 * 1.46634 0.26236 0.00000 *
16120 //
16121 HMMER3/b [3.0 | March 2010]
16122 NAME 3_End_Metazoa_58S_end_tenc_long
16123 LENG 45
16124 ALPH DNA
16125 RF no
16126 CS no
16127 MAP yes
16128 DATE Sat Feb 25 14:35:57 2012
16129 NSEQ 27
16130 EFFN 3.477173
16131 CKSUM 145315044
16132 STATS LOCAL MSV -7.2100 0.71931
16133 STATS LOCAL VITERBI -7.8054 0.71931
16134 STATS LOCAL FORWARD -4.0473 0.71931
16135 HMM A C G T
16136 m->m m->i m->d i->m i->i d->m d->d
16137 COMPO 1.53836 2.01048 1.31044 0.96328
16138 1.38629 1.38629 1.38629 1.38629
16139 0.03586 4.03904 4.03904 1.46634 0.26236 0.00000 *
16140 1 0.13569 3.42847 2.83315 3.33474 1 - -
16141 1.38629 1.38629 1.38629 1.38629
16142 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16143 2 3.48857 0.12378 3.53565 2.86920 2 - -
16144 1.38629 1.38629 1.38629 1.38629
16145 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16146 3 3.13754 2.62622 3.18381 0.17099 3 - -
16147 1.38629 1.38629 1.38629 1.38629
16148 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16149 4 0.13569 3.42847 2.83315 3.33474 4 - -
16150 1.38629 1.38629 1.38629 1.38629
16151 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16152 5 2.27052 2.44039 2.75948 0.29264 5 - -
16153 1.38629 1.38629 1.38629 1.38629
16154 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16155 6 3.48857 0.12378 3.53565 2.86920 6 - -
16156 1.38629 1.38629 1.38629 1.38629
16157 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16158 7 0.13569 3.42847 2.83315 3.33474 7 - -
16159 1.38629 1.38629 1.38629 1.38629
16160 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16161 8 2.98086 3.63644 0.11197 3.54622 8 - -
16162 1.38629 1.38629 1.38629 1.38629
16163 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16164 9 2.98086 3.63644 0.11197 3.54622 9 - -
16165 1.38629 1.38629 1.38629 1.38629
16166 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16167 10 3.13754 2.62622 3.18381 0.17099 10 - -
16168 1.38629 1.38629 1.38629 1.38629
16169 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16170 11 3.13754 2.62622 3.18381 0.17099 11 - -
16171 1.38629 1.38629 1.38629 1.38629
16172 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16173 12 3.13754 2.62622 3.18381 0.17099 12 - -
16174 1.38629 1.38629 1.38629 1.38629
16175 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16176 13 0.13569 3.42847 2.83315 3.33474 13 - -
16177 1.38629 1.38629 1.38629 1.38629
16178 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16179 14 3.13754 2.62622 3.18381 0.17099 14 - -
16180 1.38629 1.38629 1.38629 1.38629
16181 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16182 15 0.13569 3.42847 2.83315 3.33474 15 - -
16183 1.38629 1.38629 1.38629 1.38629
16184 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16185 16 3.13754 2.62622 3.18381 0.17099 16 - -
16186 1.38629 1.38629 1.38629 1.38629
16187 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16188 17 3.48857 0.12378 3.53565 2.86920 17 - -
16189 1.38629 1.38629 1.38629 1.38629
16190 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16191 18 3.13754 2.62622 3.18381 0.17099 18 - -
16192 1.38629 1.38629 1.38629 1.38629
16193 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16194 19 2.98086 3.63644 0.11197 3.54622 19 - -
16195 1.38629 1.38629 1.38629 1.38629
16196 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16197 20 3.13754 2.62622 3.18381 0.17099 20 - -
16198 1.38629 1.38629 1.38629 1.38629
16199 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16200 21 3.13754 2.62622 3.18381 0.17099 21 - -
16201 1.38629 1.38629 1.38629 1.38629
16202 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16203 22 0.13569 3.42847 2.83315 3.33474 22 - -
16204 1.38629 1.38629 1.38629 1.38629
16205 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16206 23 2.98086 3.63644 0.11197 3.54622 23 - -
16207 1.38629 1.38629 1.38629 1.38629
16208 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16209 24 3.13754 2.62622 3.18381 0.17099 24 - -
16210 1.38629 1.38629 1.38629 1.38629
16211 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16212 25 0.13569 3.42847 2.83315 3.33474 25 - -
16213 1.38629 1.38629 1.38629 1.38629
16214 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16215 26 3.13754 2.62622 3.18381 0.17099 26 - -
16216 1.38629 1.38629 1.38629 1.38629
16217 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16218 27 2.98086 3.63644 0.11197 3.54622 27 - -
16219 1.38629 1.38629 1.38629 1.38629
16220 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16221 28 3.13754 2.62622 3.18381 0.17099 28 - -
16222 1.38629 1.38629 1.38629 1.38629
16223 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16224 29 3.13754 2.62622 3.18381 0.17099 29 - -
16225 1.38629 1.38629 1.38629 1.38629
16226 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16227 30 3.13754 2.62622 3.18381 0.17099 30 - -
16228 1.38629 1.38629 1.38629 1.38629
16229 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16230 31 2.98086 3.63644 0.11197 3.54622 31 - -
16231 1.38629 1.38629 1.38629 1.38629
16232 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16233 32 2.98086 3.63644 0.11197 3.54622 32 - -
16234 1.38629 1.38629 1.38629 1.38629
16235 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16236 33 3.13754 2.62622 3.18381 0.17099 33 - -
16237 1.38629 1.38629 1.38629 1.38629
16238 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16239 34 3.13754 2.62622 3.18381 0.17099 34 - -
16240 1.38629 1.38629 1.38629 1.38629
16241 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16242 35 2.98086 3.63644 0.11197 3.54622 35 - -
16243 1.38629 1.38629 1.38629 1.38629
16244 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16245 36 0.13569 3.42847 2.83315 3.33474 36 - -
16246 1.38629 1.38629 1.38629 1.38629
16247 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16248 37 2.98086 3.63644 0.11197 3.54622 37 - -
16249 1.38629 1.38629 1.38629 1.38629
16250 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16251 38 2.98086 3.63644 0.11197 3.54622 38 - -
16252 1.38629 1.38629 1.38629 1.38629
16253 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16254 39 2.98086 3.63644 0.11197 3.54622 39 - -
16255 1.38629 1.38629 1.38629 1.38629
16256 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16257 40 3.13754 2.62622 3.18381 0.17099 40 - -
16258 1.38629 1.38629 1.38629 1.38629
16259 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16260 41 3.48857 0.12378 3.53565 2.86920 41 - -
16261 1.38629 1.38629 1.38629 1.38629
16262 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16263 42 2.98086 3.63644 0.11197 3.54622 42 - -
16264 1.38629 1.38629 1.38629 1.38629
16265 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16266 43 0.13569 3.42847 2.83315 3.33474 43 - -
16267 1.38629 1.38629 1.38629 1.38629
16268 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16269 44 3.13754 2.62622 3.18381 0.17099 44 - -
16270 1.38629 1.38629 1.38629 1.38629
16271 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547
16272 45 3.13754 2.62622 3.18381 0.17099 45 - -
16273 1.38629 1.38629 1.38629 1.38629
16274 0.01809 4.02127 * 1.46634 0.26236 0.00000 *
16275 //
16276 HMMER3/b [3.0 | March 2010]
16277 NAME 3_End_Metazoa_58S_end_tend_long
16278 LENG 45
16279 ALPH DNA
16280 RF no
16281 CS no
16282 MAP yes
16283 DATE Sat Feb 25 14:36:03 2012
16284 NSEQ 4
16285 EFFN 3.707031
16286 CKSUM 223107628
16287 STATS LOCAL MSV -7.3709 0.71933
16288 STATS LOCAL VITERBI -7.6109 0.71933
16289 STATS LOCAL FORWARD -4.0357 0.71933
16290 HMM A C G T
16291 m->m m->i m->d i->m i->i d->m d->d
16292 COMPO 1.32217 2.06016 1.44176 0.99561
16293 1.38629 1.38629 1.38629 1.38629
16294 0.03444 4.07873 4.07873 1.46634 0.26236 0.00000 *
16295 1 0.12754 3.49579 2.87650 3.40860 1 - -
16296 1.38629 1.38629 1.38629 1.38629
16297 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16298 2 3.56566 0.11545 3.60931 2.92454 2 - -
16299 1.38629 1.38629 1.38629 1.38629
16300 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16301 3 3.20678 2.67013 3.25036 0.16074 3 - -
16302 1.38629 1.38629 1.38629 1.38629
16303 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16304 4 0.12754 3.49579 2.87650 3.40860 4 - -
16305 1.38629 1.38629 1.38629 1.38629
16306 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16307 5 0.12754 3.49579 2.87650 3.40860 5 - -
16308 1.38629 1.38629 1.38629 1.38629
16309 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16310 6 3.56566 0.11545 3.60931 2.92454 6 - -
16311 1.38629 1.38629 1.38629 1.38629
16312 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16313 7 0.12754 3.49579 2.87650 3.40860 7 - -
16314 1.38629 1.38629 1.38629 1.38629
16315 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16316 8 3.02650 3.70362 0.10523 3.62062 8 - -
16317 1.38629 1.38629 1.38629 1.38629
16318 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16319 9 3.02650 3.70362 0.10523 3.62062 9 - -
16320 1.38629 1.38629 1.38629 1.38629
16321 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16322 10 3.20678 2.67013 3.25036 0.16074 10 - -
16323 1.38629 1.38629 1.38629 1.38629
16324 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16325 11 3.20678 2.67013 3.25036 0.16074 11 - -
16326 1.38629 1.38629 1.38629 1.38629
16327 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16328 12 3.20678 2.67013 3.25036 0.16074 12 - -
16329 1.38629 1.38629 1.38629 1.38629
16330 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16331 13 0.12754 3.49579 2.87650 3.40860 13 - -
16332 1.38629 1.38629 1.38629 1.38629
16333 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16334 14 3.20678 2.67013 3.25036 0.16074 14 - -
16335 1.38629 1.38629 1.38629 1.38629
16336 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16337 15 0.12754 3.49579 2.87650 3.40860 15 - -
16338 1.38629 1.38629 1.38629 1.38629
16339 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16340 16 3.20678 2.67013 3.25036 0.16074 16 - -
16341 1.38629 1.38629 1.38629 1.38629
16342 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16343 17 3.56566 0.11545 3.60931 2.92454 17 - -
16344 1.38629 1.38629 1.38629 1.38629
16345 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16346 18 3.20678 2.67013 3.25036 0.16074 18 - -
16347 1.38629 1.38629 1.38629 1.38629
16348 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16349 19 3.02650 3.70362 0.10523 3.62062 19 - -
16350 1.38629 1.38629 1.38629 1.38629
16351 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16352 20 3.20678 2.67013 3.25036 0.16074 20 - -
16353 1.38629 1.38629 1.38629 1.38629
16354 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16355 21 3.20678 2.67013 3.25036 0.16074 21 - -
16356 1.38629 1.38629 1.38629 1.38629
16357 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16358 22 0.12754 3.49579 2.87650 3.40860 22 - -
16359 1.38629 1.38629 1.38629 1.38629
16360 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16361 23 3.02650 3.70362 0.10523 3.62062 23 - -
16362 1.38629 1.38629 1.38629 1.38629
16363 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16364 24 3.20678 2.67013 3.25036 0.16074 24 - -
16365 1.38629 1.38629 1.38629 1.38629
16366 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16367 25 0.12754 3.49579 2.87650 3.40860 25 - -
16368 1.38629 1.38629 1.38629 1.38629
16369 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16370 26 2.47317 0.94581 2.54437 0.80119 26 - -
16371 1.38629 1.38629 1.38629 1.38629
16372 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16373 27 3.02650 3.70362 0.10523 3.62062 27 - -
16374 1.38629 1.38629 1.38629 1.38629
16375 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16376 28 3.20678 2.67013 3.25036 0.16074 28 - -
16377 1.38629 1.38629 1.38629 1.38629
16378 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16379 29 3.20678 2.67013 3.25036 0.16074 29 - -
16380 1.38629 1.38629 1.38629 1.38629
16381 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16382 30 3.20678 2.67013 3.25036 0.16074 30 - -
16383 1.38629 1.38629 1.38629 1.38629
16384 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16385 31 0.12754 3.49579 2.87650 3.40860 31 - -
16386 1.38629 1.38629 1.38629 1.38629
16387 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16388 32 0.12754 3.49579 2.87650 3.40860 32 - -
16389 1.38629 1.38629 1.38629 1.38629
16390 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16391 33 3.20678 2.67013 3.25036 0.16074 33 - -
16392 1.38629 1.38629 1.38629 1.38629
16393 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16394 34 3.20678 2.67013 3.25036 0.16074 34 - -
16395 1.38629 1.38629 1.38629 1.38629
16396 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16397 35 3.02650 3.70362 0.10523 3.62062 35 - -
16398 1.38629 1.38629 1.38629 1.38629
16399 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16400 36 0.12754 3.49579 2.87650 3.40860 36 - -
16401 1.38629 1.38629 1.38629 1.38629
16402 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16403 37 3.02650 3.70362 0.10523 3.62062 37 - -
16404 1.38629 1.38629 1.38629 1.38629
16405 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16406 38 3.02650 3.70362 0.10523 3.62062 38 - -
16407 1.38629 1.38629 1.38629 1.38629
16408 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16409 39 3.02650 3.70362 0.10523 3.62062 39 - -
16410 1.38629 1.38629 1.38629 1.38629
16411 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16412 40 3.20678 2.67013 3.25036 0.16074 40 - -
16413 1.38629 1.38629 1.38629 1.38629
16414 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16415 41 2.47317 0.94581 2.54437 0.80119 41 - -
16416 1.38629 1.38629 1.38629 1.38629
16417 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16418 42 3.02650 3.70362 0.10523 3.62062 42 - -
16419 1.38629 1.38629 1.38629 1.38629
16420 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16421 43 0.12754 3.49579 2.87650 3.40860 43 - -
16422 1.38629 1.38629 1.38629 1.38629
16423 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16424 44 3.20678 2.67013 3.25036 0.16074 44 - -
16425 1.38629 1.38629 1.38629 1.38629
16426 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547
16427 45 3.20678 2.67013 3.25036 0.16074 45 - -
16428 1.38629 1.38629 1.38629 1.38629
16429 0.01737 4.06165 * 1.46634 0.26236 0.00000 *
16430 //
16431 HMMER3/b [3.0 | March 2010]
16432 NAME 3_End_Metazoa_58S_end_tene_long
16433 LENG 45
16434 ALPH DNA
16435 RF no
16436 CS no
16437 MAP yes
16438 DATE Sat Feb 25 14:36:09 2012
16439 NSEQ 5
16440 EFFN 3.735352
16441 CKSUM 1997058217
16442 STATS LOCAL MSV -7.2306 0.71932
16443 STATS LOCAL VITERBI -7.6111 0.71932
16444 STATS LOCAL FORWARD -4.0332 0.71932
16445 HMM A C G T
16446 m->m m->i m->d i->m i->i d->m d->d
16447 COMPO 1.49987 1.83225 1.50630 0.92873
16448 1.38629 1.38629 1.38629 1.38629
16449 0.03428 4.08351 4.08351 1.46634 0.26236 0.00000 *
16450 1 0.12662 3.50373 2.88160 3.41733 1 - -
16451 1.38629 1.38629 1.38629 1.38629
16452 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16453 2 3.57473 0.11452 3.61797 2.93101 2 - -
16454 1.38629 1.38629 1.38629 1.38629
16455 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16456 3 3.21503 2.67536 3.25828 0.15957 3 - -
16457 1.38629 1.38629 1.38629 1.38629
16458 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16459 4 0.61319 2.63365 1.19099 2.49325 4 - -
16460 1.38629 1.38629 1.38629 1.38629
16461 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16462 5 0.12662 3.50373 2.88160 3.41733 5 - -
16463 1.38629 1.38629 1.38629 1.38629
16464 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16465 6 3.57473 0.11452 3.61797 2.93101 6 - -
16466 1.38629 1.38629 1.38629 1.38629
16467 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16468 7 0.12662 3.50373 2.88160 3.41733 7 - -
16469 1.38629 1.38629 1.38629 1.38629
16470 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16471 8 3.03183 3.71149 0.10447 3.62935 8 - -
16472 1.38629 1.38629 1.38629 1.38629
16473 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16474 9 3.03183 3.71149 0.10447 3.62935 9 - -
16475 1.38629 1.38629 1.38629 1.38629
16476 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16477 10 3.21503 2.67536 3.25828 0.15957 10 - -
16478 1.38629 1.38629 1.38629 1.38629
16479 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16480 11 3.21503 2.67536 3.25828 0.15957 11 - -
16481 1.38629 1.38629 1.38629 1.38629
16482 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16483 12 3.21503 2.67536 3.25828 0.15957 12 - -
16484 1.38629 1.38629 1.38629 1.38629
16485 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16486 13 2.50744 0.71426 2.57900 1.04094 13 - -
16487 1.38629 1.38629 1.38629 1.38629
16488 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16489 14 3.21503 2.67536 3.25828 0.15957 14 - -
16490 1.38629 1.38629 1.38629 1.38629
16491 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16492 15 0.12662 3.50373 2.88160 3.41733 15 - -
16493 1.38629 1.38629 1.38629 1.38629
16494 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16495 16 3.21503 2.67536 3.25828 0.15957 16 - -
16496 1.38629 1.38629 1.38629 1.38629
16497 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16498 17 3.57473 0.11452 3.61797 2.93101 17 - -
16499 1.38629 1.38629 1.38629 1.38629
16500 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16501 18 3.21503 2.67536 3.25828 0.15957 18 - -
16502 1.38629 1.38629 1.38629 1.38629
16503 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16504 19 3.03183 3.71149 0.10447 3.62935 19 - -
16505 1.38629 1.38629 1.38629 1.38629
16506 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16507 20 3.21503 2.67536 3.25828 0.15957 20 - -
16508 1.38629 1.38629 1.38629 1.38629
16509 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16510 21 3.21503 2.67536 3.25828 0.15957 21 - -
16511 1.38629 1.38629 1.38629 1.38629
16512 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16513 22 0.12662 3.50373 2.88160 3.41733 22 - -
16514 1.38629 1.38629 1.38629 1.38629
16515 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16516 23 3.03183 3.71149 0.10447 3.62935 23 - -
16517 1.38629 1.38629 1.38629 1.38629
16518 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16519 24 3.21503 2.67536 3.25828 0.15957 24 - -
16520 1.38629 1.38629 1.38629 1.38629
16521 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16522 25 0.12662 3.50373 2.88160 3.41733 25 - -
16523 1.38629 1.38629 1.38629 1.38629
16524 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16525 26 3.21503 2.67536 3.25828 0.15957 26 - -
16526 1.38629 1.38629 1.38629 1.38629
16527 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16528 27 3.03183 3.71149 0.10447 3.62935 27 - -
16529 1.38629 1.38629 1.38629 1.38629
16530 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16531 28 3.21503 2.67536 3.25828 0.15957 28 - -
16532 1.38629 1.38629 1.38629 1.38629
16533 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16534 29 3.21503 2.67536 3.25828 0.15957 29 - -
16535 1.38629 1.38629 1.38629 1.38629
16536 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16537 30 3.57473 0.11452 3.61797 2.93101 30 - -
16538 1.38629 1.38629 1.38629 1.38629
16539 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16540 31 0.12662 3.50373 2.88160 3.41733 31 - -
16541 1.38629 1.38629 1.38629 1.38629
16542 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16543 32 0.12662 3.50373 2.88160 3.41733 32 - -
16544 1.38629 1.38629 1.38629 1.38629
16545 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16546 33 3.21503 2.67536 3.25828 0.15957 33 - -
16547 1.38629 1.38629 1.38629 1.38629
16548 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16549 34 3.21503 2.67536 3.25828 0.15957 34 - -
16550 1.38629 1.38629 1.38629 1.38629
16551 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16552 35 3.03183 3.71149 0.10447 3.62935 35 - -
16553 1.38629 1.38629 1.38629 1.38629
16554 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16555 36 0.12662 3.50373 2.88160 3.41733 36 - -
16556 1.38629 1.38629 1.38629 1.38629
16557 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16558 37 3.03183 3.71149 0.10447 3.62935 37 - -
16559 1.38629 1.38629 1.38629 1.38629
16560 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16561 38 3.03183 3.71149 0.10447 3.62935 38 - -
16562 1.38629 1.38629 1.38629 1.38629
16563 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16564 39 3.03183 3.71149 0.10447 3.62935 39 - -
16565 1.38629 1.38629 1.38629 1.38629
16566 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16567 40 3.21503 2.67536 3.25828 0.15957 40 - -
16568 1.38629 1.38629 1.38629 1.38629
16569 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16570 41 3.57473 0.11452 3.61797 2.93101 41 - -
16571 1.38629 1.38629 1.38629 1.38629
16572 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16573 42 3.21503 2.67536 3.25828 0.15957 42 - -
16574 1.38629 1.38629 1.38629 1.38629
16575 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16576 43 3.21503 2.67536 3.25828 0.15957 43 - -
16577 1.38629 1.38629 1.38629 1.38629
16578 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16579 44 3.21503 2.67536 3.25828 0.15957 44 - -
16580 1.38629 1.38629 1.38629 1.38629
16581 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547
16582 45 3.21503 2.67536 3.25828 0.15957 45 - -
16583 1.38629 1.38629 1.38629 1.38629
16584 0.01729 4.06652 * 1.46634 0.26236 0.00000 *
16585 //
16586 HMMER3/b [3.0 | March 2010]
16587 NAME 3_End_Metazoa_58S_end_tenf_long
16588 LENG 45
16589 ALPH DNA
16590 RF no
16591 CS no
16592 MAP yes
16593 DATE Sat Feb 25 14:36:14 2012
16594 NSEQ 9
16595 EFFN 3.388184
16596 CKSUM 3584086150
16597 STATS LOCAL MSV -7.3202 0.71932
16598 STATS LOCAL VITERBI -7.7155 0.71932
16599 STATS LOCAL FORWARD -3.9805 0.71932
16600 HMM A C G T
16601 m->m m->i m->d i->m i->i d->m d->d
16602 COMPO 1.47116 1.78523 1.37718 1.04898
16603 1.38629 1.38629 1.38629 1.38629
16604 0.03645 4.02324 4.02324 1.46634 0.26236 0.00000 *
16605 1 2.96194 3.60876 0.11489 3.51562 1 - -
16606 1.38629 1.38629 1.38629 1.38629
16607 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16608 2 3.45700 0.12739 3.50544 2.84636 2 - -
16609 1.38629 1.38629 1.38629 1.38629
16610 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16611 3 0.13919 3.40101 2.81538 3.30464 3 - -
16612 1.38629 1.38629 1.38629 1.38629
16613 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16614 4 3.45700 0.12739 3.50544 2.84636 4 - -
16615 1.38629 1.38629 1.38629 1.38629
16616 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16617 5 3.10960 2.60848 3.15695 0.17533 5 - -
16618 1.38629 1.38629 1.38629 1.38629
16619 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16620 6 0.13919 3.40101 2.81538 3.30464 6 - -
16621 1.38629 1.38629 1.38629 1.38629
16622 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16623 7 0.13919 3.40101 2.81538 3.30464 7 - -
16624 1.38629 1.38629 1.38629 1.38629
16625 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16626 8 3.45700 0.12739 3.50544 2.84636 8 - -
16627 1.38629 1.38629 1.38629 1.38629
16628 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16629 9 0.13919 3.40101 2.81538 3.30464 9 - -
16630 1.38629 1.38629 1.38629 1.38629
16631 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16632 10 2.96194 3.60876 0.11489 3.51562 10 - -
16633 1.38629 1.38629 1.38629 1.38629
16634 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16635 11 2.96194 3.60876 0.11489 3.51562 11 - -
16636 1.38629 1.38629 1.38629 1.38629
16637 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16638 12 2.96194 3.60876 0.11489 3.51562 12 - -
16639 1.38629 1.38629 1.38629 1.38629
16640 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16641 13 3.10960 2.60848 3.15695 0.17533 13 - -
16642 1.38629 1.38629 1.38629 1.38629
16643 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16644 14 3.10960 2.60848 3.15695 0.17533 14 - -
16645 1.38629 1.38629 1.38629 1.38629
16646 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16647 15 0.13919 3.40101 2.81538 3.30464 15 - -
16648 1.38629 1.38629 1.38629 1.38629
16649 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16650 16 3.10960 2.60848 3.15695 0.17533 16 - -
16651 1.38629 1.38629 1.38629 1.38629
16652 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16653 17 3.45700 0.12739 3.50544 2.84636 17 - -
16654 1.38629 1.38629 1.38629 1.38629
16655 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16656 18 3.10960 2.60848 3.15695 0.17533 18 - -
16657 1.38629 1.38629 1.38629 1.38629
16658 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16659 19 2.96194 3.60876 0.11489 3.51562 19 - -
16660 1.38629 1.38629 1.38629 1.38629
16661 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16662 20 3.10960 2.60848 3.15695 0.17533 20 - -
16663 1.38629 1.38629 1.38629 1.38629
16664 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16665 21 3.10960 2.60848 3.15695 0.17533 21 - -
16666 1.38629 1.38629 1.38629 1.38629
16667 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16668 22 0.13919 3.40101 2.81538 3.30464 22 - -
16669 1.38629 1.38629 1.38629 1.38629
16670 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16671 23 2.96194 3.60876 0.11489 3.51562 23 - -
16672 1.38629 1.38629 1.38629 1.38629
16673 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16674 24 3.10960 2.60848 3.15695 0.17533 24 - -
16675 1.38629 1.38629 1.38629 1.38629
16676 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16677 25 0.13919 3.40101 2.81538 3.30464 25 - -
16678 1.38629 1.38629 1.38629 1.38629
16679 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16680 26 3.10960 2.60848 3.15695 0.17533 26 - -
16681 1.38629 1.38629 1.38629 1.38629
16682 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16683 27 2.96194 3.60876 0.11489 3.51562 27 - -
16684 1.38629 1.38629 1.38629 1.38629
16685 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16686 28 3.10960 2.60848 3.15695 0.17533 28 - -
16687 1.38629 1.38629 1.38629 1.38629
16688 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16689 29 3.10960 2.60848 3.15695 0.17533 29 - -
16690 1.38629 1.38629 1.38629 1.38629
16691 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16692 30 3.45700 0.12739 3.50544 2.84636 30 - -
16693 1.38629 1.38629 1.38629 1.38629
16694 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16695 31 0.13919 3.40101 2.81538 3.30464 31 - -
16696 1.38629 1.38629 1.38629 1.38629
16697 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16698 32 0.13919 3.40101 2.81538 3.30464 32 - -
16699 1.38629 1.38629 1.38629 1.38629
16700 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16701 33 3.10960 2.60848 3.15695 0.17533 33 - -
16702 1.38629 1.38629 1.38629 1.38629
16703 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16704 34 3.10960 2.60848 3.15695 0.17533 34 - -
16705 1.38629 1.38629 1.38629 1.38629
16706 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16707 35 2.96194 3.60876 0.11489 3.51562 35 - -
16708 1.38629 1.38629 1.38629 1.38629
16709 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16710 36 0.13919 3.40101 2.81538 3.30464 36 - -
16711 1.38629 1.38629 1.38629 1.38629
16712 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16713 37 2.96194 3.60876 0.11489 3.51562 37 - -
16714 1.38629 1.38629 1.38629 1.38629
16715 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16716 38 2.96194 3.60876 0.11489 3.51562 38 - -
16717 1.38629 1.38629 1.38629 1.38629
16718 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16719 39 2.96194 3.60876 0.11489 3.51562 39 - -
16720 1.38629 1.38629 1.38629 1.38629
16721 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16722 40 3.10960 2.60848 3.15695 0.17533 40 - -
16723 1.38629 1.38629 1.38629 1.38629
16724 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16725 41 3.45700 0.12739 3.50544 2.84636 41 - -
16726 1.38629 1.38629 1.38629 1.38629
16727 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16728 42 3.10960 2.60848 3.15695 0.17533 42 - -
16729 1.38629 1.38629 1.38629 1.38629
16730 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16731 43 3.10960 2.60848 3.15695 0.17533 43 - -
16732 1.38629 1.38629 1.38629 1.38629
16733 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16734 44 3.10960 2.60848 3.15695 0.17533 44 - -
16735 1.38629 1.38629 1.38629 1.38629
16736 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547
16737 45 3.10960 2.60848 3.15695 0.17533 45 - -
16738 1.38629 1.38629 1.38629 1.38629
16739 0.01839 4.00518 * 1.46634 0.26236 0.00000 *
16740 //
16741 HMMER3/b [3.0 | March 2010]
16742 NAME 3_End_Metazoa_58S_end_teng_long
16743 LENG 45
16744 ALPH DNA
16745 RF no
16746 CS no
16747 MAP yes
16748 DATE Sat Feb 25 14:36:22 2012
16749 NSEQ 2
16750 EFFN 2.000000
16751 CKSUM 3663368387
16752 STATS LOCAL MSV -7.3488 0.72876
16753 STATS LOCAL VITERBI -8.2888 0.72876
16754 STATS LOCAL FORWARD -3.6395 0.72876
16755 HMM A C G T
16756 m->m m->i m->d i->m i->i d->m d->d
16757 COMPO 1.38983 1.64273 1.43124 1.14439
16758 1.38629 1.38629 1.38629 1.38629
16759 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
16760 1 0.23862 2.84929 2.43386 2.70756 1 - -
16761 1.38629 1.38629 1.38629 1.38629
16762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16763 2 2.81865 0.23582 2.88868 2.35662 2 - -
16764 1.38629 1.38629 1.38629 1.38629
16765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16766 3 0.23862 2.84929 2.43386 2.70756 3 - -
16767 1.38629 1.38629 1.38629 1.38629
16768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16769 4 0.23862 2.84929 2.43386 2.70756 4 - -
16770 1.38629 1.38629 1.38629 1.38629
16771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16772 5 0.23862 2.84929 2.43386 2.70756 5 - -
16773 1.38629 1.38629 1.38629 1.38629
16774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16775 6 2.81865 0.23582 2.88868 2.35662 6 - -
16776 1.38629 1.38629 1.38629 1.38629
16777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16778 7 0.23862 2.84929 2.43386 2.70756 7 - -
16779 1.38629 1.38629 1.38629 1.38629
16780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16781 8 2.53331 3.02441 0.20344 2.88069 8 - -
16782 1.38629 1.38629 1.38629 1.38629
16783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16784 9 2.53331 3.02441 0.20344 2.88069 9 - -
16785 1.38629 1.38629 1.38629 1.38629
16786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16787 10 2.57915 2.25909 2.64442 0.28946 10 - -
16788 1.38629 1.38629 1.38629 1.38629
16789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16790 11 2.57915 2.25909 2.64442 0.28946 11 - -
16791 1.38629 1.38629 1.38629 1.38629
16792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16793 12 2.57915 2.25909 2.64442 0.28946 12 - -
16794 1.38629 1.38629 1.38629 1.38629
16795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16796 13 0.23862 2.84929 2.43386 2.70756 13 - -
16797 1.38629 1.38629 1.38629 1.38629
16798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16799 14 2.57915 2.25909 2.64442 0.28946 14 - -
16800 1.38629 1.38629 1.38629 1.38629
16801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16802 15 0.23862 2.84929 2.43386 2.70756 15 - -
16803 1.38629 1.38629 1.38629 1.38629
16804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16805 16 2.57915 2.25909 2.64442 0.28946 16 - -
16806 1.38629 1.38629 1.38629 1.38629
16807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16808 17 2.81865 0.23582 2.88868 2.35662 17 - -
16809 1.38629 1.38629 1.38629 1.38629
16810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16811 18 2.57915 2.25909 2.64442 0.28946 18 - -
16812 1.38629 1.38629 1.38629 1.38629
16813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16814 19 2.53331 3.02441 0.20344 2.88069 19 - -
16815 1.38629 1.38629 1.38629 1.38629
16816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16817 20 2.57915 2.25909 2.64442 0.28946 20 - -
16818 1.38629 1.38629 1.38629 1.38629
16819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16820 21 2.57915 2.25909 2.64442 0.28946 21 - -
16821 1.38629 1.38629 1.38629 1.38629
16822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16823 22 2.81865 0.23582 2.88868 2.35662 22 - -
16824 1.38629 1.38629 1.38629 1.38629
16825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16826 23 2.53331 3.02441 0.20344 2.88069 23 - -
16827 1.38629 1.38629 1.38629 1.38629
16828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16829 24 2.57915 2.25909 2.64442 0.28946 24 - -
16830 1.38629 1.38629 1.38629 1.38629
16831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16832 25 0.23862 2.84929 2.43386 2.70756 25 - -
16833 1.38629 1.38629 1.38629 1.38629
16834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16835 26 2.57915 2.25909 2.64442 0.28946 26 - -
16836 1.38629 1.38629 1.38629 1.38629
16837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16838 27 2.53331 3.02441 0.20344 2.88069 27 - -
16839 1.38629 1.38629 1.38629 1.38629
16840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16841 28 2.57915 2.25909 2.64442 0.28946 28 - -
16842 1.38629 1.38629 1.38629 1.38629
16843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16844 29 2.81865 0.23582 2.88868 2.35662 29 - -
16845 1.38629 1.38629 1.38629 1.38629
16846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16847 30 2.57915 2.25909 2.64442 0.28946 30 - -
16848 1.38629 1.38629 1.38629 1.38629
16849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16850 31 2.81865 0.23582 2.88868 2.35662 31 - -
16851 1.38629 1.38629 1.38629 1.38629
16852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16853 32 0.23862 2.84929 2.43386 2.70756 32 - -
16854 1.38629 1.38629 1.38629 1.38629
16855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16856 33 2.57915 2.25909 2.64442 0.28946 33 - -
16857 1.38629 1.38629 1.38629 1.38629
16858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16859 34 2.57915 2.25909 2.64442 0.28946 34 - -
16860 1.38629 1.38629 1.38629 1.38629
16861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16862 35 2.53331 3.02441 0.20344 2.88069 35 - -
16863 1.38629 1.38629 1.38629 1.38629
16864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16865 36 0.23862 2.84929 2.43386 2.70756 36 - -
16866 1.38629 1.38629 1.38629 1.38629
16867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16868 37 2.53331 3.02441 0.20344 2.88069 37 - -
16869 1.38629 1.38629 1.38629 1.38629
16870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16871 38 2.53331 3.02441 0.20344 2.88069 38 - -
16872 1.38629 1.38629 1.38629 1.38629
16873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16874 39 2.53331 3.02441 0.20344 2.88069 39 - -
16875 1.38629 1.38629 1.38629 1.38629
16876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16877 40 2.57915 2.25909 2.64442 0.28946 40 - -
16878 1.38629 1.38629 1.38629 1.38629
16879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16880 41 2.81865 0.23582 2.88868 2.35662 41 - -
16881 1.38629 1.38629 1.38629 1.38629
16882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16883 42 2.53331 3.02441 0.20344 2.88069 42 - -
16884 1.38629 1.38629 1.38629 1.38629
16885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16886 43 0.23862 2.84929 2.43386 2.70756 43 - -
16887 1.38629 1.38629 1.38629 1.38629
16888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16889 44 2.57915 2.25909 2.64442 0.28946 44 - -
16890 1.38629 1.38629 1.38629 1.38629
16891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16892 45 2.57915 2.25909 2.64442 0.28946 45 - -
16893 1.38629 1.38629 1.38629 1.38629
16894 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
16895 //
16896 HMMER3/b [3.0 | March 2010]
16897 NAME 3_End_Metazoa_58S_end_thirteena_long
16898 LENG 45
16899 ALPH DNA
16900 RF no
16901 CS no
16902 MAP yes
16903 DATE Sat Feb 25 14:38:02 2012
16904 NSEQ 3
16905 EFFN 3.000000
16906 CKSUM 2336979512
16907 STATS LOCAL MSV -7.9801 0.72066
16908 STATS LOCAL VITERBI -7.8245 0.72066
16909 STATS LOCAL FORWARD -3.9046 0.72066
16910 HMM A C G T
16911 m->m m->i m->d i->m i->i d->m d->d
16912 COMPO 1.32957 2.00957 1.24643 1.15889
16913 1.38629 1.38629 1.38629 1.38629
16914 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
16915 1 2.97980 2.52563 3.03204 0.19727 1 - -
16916 1.38629 1.38629 1.38629 1.38629
16917 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16918 2 0.15719 3.27118 2.73043 3.16274 2 - -
16919 1.38629 1.38629 1.38629 1.38629
16920 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16921 3 2.97980 2.52563 3.03204 0.19727 3 - -
16922 1.38629 1.38629 1.38629 1.38629
16923 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16924 4 0.15719 3.27118 2.73043 3.16274 4 - -
16925 1.38629 1.38629 1.38629 1.38629
16926 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16927 5 0.15719 3.27118 2.73043 3.16274 5 - -
16928 1.38629 1.38629 1.38629 1.38629
16929 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16930 6 2.97980 2.52563 3.03204 0.19727 6 - -
16931 1.38629 1.38629 1.38629 1.38629
16932 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16933 7 2.97980 2.52563 3.03204 0.19727 7 - -
16934 1.38629 1.38629 1.38629 1.38629
16935 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16936 8 2.86982 3.47591 0.13017 3.36931 8 - -
16937 1.38629 1.38629 1.38629 1.38629
16938 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16939 9 0.15719 3.27118 2.73043 3.16274 9 - -
16940 1.38629 1.38629 1.38629 1.38629
16941 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16942 10 0.15719 3.27118 2.73043 3.16274 10 - -
16943 1.38629 1.38629 1.38629 1.38629
16944 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16945 11 2.86982 3.47591 0.13017 3.36931 11 - -
16946 1.38629 1.38629 1.38629 1.38629
16947 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16948 12 2.97980 2.52563 3.03204 0.19727 12 - -
16949 1.38629 1.38629 1.38629 1.38629
16950 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16951 13 2.86982 3.47591 0.13017 3.36931 13 - -
16952 1.38629 1.38629 1.38629 1.38629
16953 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16954 14 3.30705 0.14631 3.36166 2.73626 14 - -
16955 1.38629 1.38629 1.38629 1.38629
16956 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16957 15 2.97980 2.52563 3.03204 0.19727 15 - -
16958 1.38629 1.38629 1.38629 1.38629
16959 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16960 16 2.86982 3.47591 0.13017 3.36931 16 - -
16961 1.38629 1.38629 1.38629 1.38629
16962 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16963 17 3.30705 0.14631 3.36166 2.73626 17 - -
16964 1.38629 1.38629 1.38629 1.38629
16965 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16966 18 2.97980 2.52563 3.03204 0.19727 18 - -
16967 1.38629 1.38629 1.38629 1.38629
16968 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16969 19 2.97980 2.52563 3.03204 0.19727 19 - -
16970 1.38629 1.38629 1.38629 1.38629
16971 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16972 20 2.86982 3.47591 0.13017 3.36931 20 - -
16973 1.38629 1.38629 1.38629 1.38629
16974 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16975 21 2.86982 3.47591 0.13017 3.36931 21 - -
16976 1.38629 1.38629 1.38629 1.38629
16977 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16978 22 0.15719 3.27118 2.73043 3.16274 22 - -
16979 1.38629 1.38629 1.38629 1.38629
16980 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16981 23 3.30705 0.14631 3.36166 2.73626 23 - -
16982 1.38629 1.38629 1.38629 1.38629
16983 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16984 24 2.97980 2.52563 3.03204 0.19727 24 - -
16985 1.38629 1.38629 1.38629 1.38629
16986 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16987 25 0.15719 3.27118 2.73043 3.16274 25 - -
16988 1.38629 1.38629 1.38629 1.38629
16989 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16990 26 3.30705 0.14631 3.36166 2.73626 26 - -
16991 1.38629 1.38629 1.38629 1.38629
16992 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16993 27 0.15719 3.27118 2.73043 3.16274 27 - -
16994 1.38629 1.38629 1.38629 1.38629
16995 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16996 28 2.97980 2.52563 3.03204 0.19727 28 - -
16997 1.38629 1.38629 1.38629 1.38629
16998 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
16999 29 0.15719 3.27118 2.73043 3.16274 29 - -
17000 1.38629 1.38629 1.38629 1.38629
17001 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17002 30 2.97980 2.52563 3.03204 0.19727 30 - -
17003 1.38629 1.38629 1.38629 1.38629
17004 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17005 31 2.86982 3.47591 0.13017 3.36931 31 - -
17006 1.38629 1.38629 1.38629 1.38629
17007 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17008 32 2.86982 3.47591 0.13017 3.36931 32 - -
17009 1.38629 1.38629 1.38629 1.38629
17010 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17011 33 2.97980 2.52563 3.03204 0.19727 33 - -
17012 1.38629 1.38629 1.38629 1.38629
17013 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17014 34 2.97980 2.52563 3.03204 0.19727 34 - -
17015 1.38629 1.38629 1.38629 1.38629
17016 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17017 35 2.86982 3.47591 0.13017 3.36931 35 - -
17018 1.38629 1.38629 1.38629 1.38629
17019 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17020 36 0.15719 3.27118 2.73043 3.16274 36 - -
17021 1.38629 1.38629 1.38629 1.38629
17022 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17023 37 2.86982 3.47591 0.13017 3.36931 37 - -
17024 1.38629 1.38629 1.38629 1.38629
17025 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17026 38 2.86982 3.47591 0.13017 3.36931 38 - -
17027 1.38629 1.38629 1.38629 1.38629
17028 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17029 39 2.86982 3.47591 0.13017 3.36931 39 - -
17030 1.38629 1.38629 1.38629 1.38629
17031 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17032 40 2.97980 2.52563 3.03204 0.19727 40 - -
17033 1.38629 1.38629 1.38629 1.38629
17034 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17035 41 2.97980 2.52563 3.03204 0.19727 41 - -
17036 1.38629 1.38629 1.38629 1.38629
17037 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17038 42 2.86982 3.47591 0.13017 3.36931 42 - -
17039 1.38629 1.38629 1.38629 1.38629
17040 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17041 43 2.97980 2.52563 3.03204 0.19727 43 - -
17042 1.38629 1.38629 1.38629 1.38629
17043 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17044 44 0.15719 3.27118 2.73043 3.16274 44 - -
17045 1.38629 1.38629 1.38629 1.38629
17046 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17047 45 0.15719 3.27118 2.73043 3.16274 45 - -
17048 1.38629 1.38629 1.38629 1.38629
17049 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
17050 //
17051 HMMER3/b [3.0 | March 2010]
17052 NAME 3_End_Metazoa_58S_end_thirteenb_long
17053 LENG 45
17054 ALPH DNA
17055 RF no
17056 CS no
17057 MAP yes
17058 DATE Sat Feb 25 14:38:12 2012
17059 NSEQ 3
17060 EFFN 3.000000
17061 CKSUM 2866047971
17062 STATS LOCAL MSV -8.0194 0.72073
17063 STATS LOCAL VITERBI -7.8566 0.72073
17064 STATS LOCAL FORWARD -3.9487 0.72073
17065 HMM A C G T
17066 m->m m->i m->d i->m i->i d->m d->d
17067 COMPO 1.39363 2.00317 1.24770 1.10940
17068 1.38629 1.38629 1.38629 1.38629
17069 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
17070 1 2.97980 2.52563 3.03204 0.19727 1 - -
17071 1.38629 1.38629 1.38629 1.38629
17072 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17073 2 0.15719 3.27118 2.73043 3.16274 2 - -
17074 1.38629 1.38629 1.38629 1.38629
17075 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17076 3 0.15719 3.27118 2.73043 3.16274 3 - -
17077 1.38629 1.38629 1.38629 1.38629
17078 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17079 4 2.97980 2.52563 3.03204 0.19727 4 - -
17080 1.38629 1.38629 1.38629 1.38629
17081 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17082 5 2.97980 2.52563 3.03204 0.19727 5 - -
17083 1.38629 1.38629 1.38629 1.38629
17084 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17085 6 2.97980 2.52563 3.03204 0.19727 6 - -
17086 1.38629 1.38629 1.38629 1.38629
17087 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17088 7 2.97980 2.52563 3.03204 0.19727 7 - -
17089 1.38629 1.38629 1.38629 1.38629
17090 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17091 8 0.15719 3.27118 2.73043 3.16274 8 - -
17092 1.38629 1.38629 1.38629 1.38629
17093 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17094 9 0.15719 3.27118 2.73043 3.16274 9 - -
17095 1.38629 1.38629 1.38629 1.38629
17096 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17097 10 2.86982 3.47591 0.13017 3.36931 10 - -
17098 1.38629 1.38629 1.38629 1.38629
17099 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17100 11 2.86982 3.47591 0.13017 3.36931 11 - -
17101 1.38629 1.38629 1.38629 1.38629
17102 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17103 12 2.97980 2.52563 3.03204 0.19727 12 - -
17104 1.38629 1.38629 1.38629 1.38629
17105 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17106 13 2.86982 3.47591 0.13017 3.36931 13 - -
17107 1.38629 1.38629 1.38629 1.38629
17108 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17109 14 3.30705 0.14631 3.36166 2.73626 14 - -
17110 1.38629 1.38629 1.38629 1.38629
17111 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17112 15 2.97980 2.52563 3.03204 0.19727 15 - -
17113 1.38629 1.38629 1.38629 1.38629
17114 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17115 16 2.86982 3.47591 0.13017 3.36931 16 - -
17116 1.38629 1.38629 1.38629 1.38629
17117 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17118 17 3.30705 0.14631 3.36166 2.73626 17 - -
17119 1.38629 1.38629 1.38629 1.38629
17120 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17121 18 2.97980 2.52563 3.03204 0.19727 18 - -
17122 1.38629 1.38629 1.38629 1.38629
17123 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17124 19 2.97980 2.52563 3.03204 0.19727 19 - -
17125 1.38629 1.38629 1.38629 1.38629
17126 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17127 20 2.86982 3.47591 0.13017 3.36931 20 - -
17128 1.38629 1.38629 1.38629 1.38629
17129 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17130 21 2.86982 3.47591 0.13017 3.36931 21 - -
17131 1.38629 1.38629 1.38629 1.38629
17132 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17133 22 0.15719 3.27118 2.73043 3.16274 22 - -
17134 1.38629 1.38629 1.38629 1.38629
17135 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17136 23 3.30705 0.14631 3.36166 2.73626 23 - -
17137 1.38629 1.38629 1.38629 1.38629
17138 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17139 24 2.97980 2.52563 3.03204 0.19727 24 - -
17140 1.38629 1.38629 1.38629 1.38629
17141 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17142 25 0.15719 3.27118 2.73043 3.16274 25 - -
17143 1.38629 1.38629 1.38629 1.38629
17144 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17145 26 3.30705 0.14631 3.36166 2.73626 26 - -
17146 1.38629 1.38629 1.38629 1.38629
17147 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17148 27 0.15719 3.27118 2.73043 3.16274 27 - -
17149 1.38629 1.38629 1.38629 1.38629
17150 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17151 28 2.97980 2.52563 3.03204 0.19727 28 - -
17152 1.38629 1.38629 1.38629 1.38629
17153 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17154 29 0.15719 3.27118 2.73043 3.16274 29 - -
17155 1.38629 1.38629 1.38629 1.38629
17156 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17157 30 2.97980 2.52563 3.03204 0.19727 30 - -
17158 1.38629 1.38629 1.38629 1.38629
17159 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17160 31 2.86982 3.47591 0.13017 3.36931 31 - -
17161 1.38629 1.38629 1.38629 1.38629
17162 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17163 32 2.86982 3.47591 0.13017 3.36931 32 - -
17164 1.38629 1.38629 1.38629 1.38629
17165 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17166 33 2.97980 2.52563 3.03204 0.19727 33 - -
17167 1.38629 1.38629 1.38629 1.38629
17168 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17169 34 2.97980 2.52563 3.03204 0.19727 34 - -
17170 1.38629 1.38629 1.38629 1.38629
17171 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17172 35 2.86982 3.47591 0.13017 3.36931 35 - -
17173 1.38629 1.38629 1.38629 1.38629
17174 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17175 36 0.15719 3.27118 2.73043 3.16274 36 - -
17176 1.38629 1.38629 1.38629 1.38629
17177 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17178 37 2.86982 3.47591 0.13017 3.36931 37 - -
17179 1.38629 1.38629 1.38629 1.38629
17180 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17181 38 2.86982 3.47591 0.13017 3.36931 38 - -
17182 1.38629 1.38629 1.38629 1.38629
17183 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17184 39 2.86982 3.47591 0.13017 3.36931 39 - -
17185 1.38629 1.38629 1.38629 1.38629
17186 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17187 40 2.97980 2.52563 3.03204 0.19727 40 - -
17188 1.38629 1.38629 1.38629 1.38629
17189 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17190 41 2.97980 2.52563 3.03204 0.19727 41 - -
17191 1.38629 1.38629 1.38629 1.38629
17192 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17193 42 2.86982 3.47591 0.13017 3.36931 42 - -
17194 1.38629 1.38629 1.38629 1.38629
17195 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17196 43 2.97980 2.52563 3.03204 0.19727 43 - -
17197 1.38629 1.38629 1.38629 1.38629
17198 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17199 44 0.15719 3.27118 2.73043 3.16274 44 - -
17200 1.38629 1.38629 1.38629 1.38629
17201 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17202 45 0.15719 3.27118 2.73043 3.16274 45 - -
17203 1.38629 1.38629 1.38629 1.38629
17204 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
17205 //
17206 HMMER3/b [3.0 | March 2010]
17207 NAME 3_End_Metazoa_58S_end_thirty_long
17208 LENG 45
17209 ALPH DNA
17210 RF no
17211 CS no
17212 MAP yes
17213 DATE Sat Feb 25 14:43:16 2012
17214 NSEQ 7
17215 EFFN 3.277832
17216 CKSUM 3385757595
17217 STATS LOCAL MSV -8.0891 0.71932
17218 STATS LOCAL VITERBI -7.6678 0.71932
17219 STATS LOCAL FORWARD -3.7375 0.71932
17220 HMM A C G T
17221 m->m m->i m->d i->m i->i d->m d->d
17222 COMPO 1.72215 1.52760 1.19403 1.19976
17223 1.38629 1.38629 1.38629 1.38629
17224 0.03719 4.00329 4.00329 1.46634 0.26236 0.00000 *
17225 1 2.93741 3.57306 0.11878 3.47620 1 - -
17226 1.38629 1.38629 1.38629 1.38629
17227 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17228 2 2.93741 3.57306 0.11878 3.47620 2 - -
17229 1.38629 1.38629 1.38629 1.38629
17230 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17231 3 3.41643 0.13221 3.46659 2.81684 3 - -
17232 1.38629 1.38629 1.38629 1.38629
17233 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17234 4 3.07403 2.58586 3.12274 0.18104 4 - -
17235 1.38629 1.38629 1.38629 1.38629
17236 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17237 5 3.07403 2.58586 3.12274 0.18104 5 - -
17238 1.38629 1.38629 1.38629 1.38629
17239 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17240 6 3.07403 2.58586 3.12274 0.18104 6 - -
17241 1.38629 1.38629 1.38629 1.38629
17242 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17243 7 3.41643 0.13221 3.46659 2.81684 7 - -
17244 1.38629 1.38629 1.38629 1.38629
17245 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17246 8 2.93741 3.57306 0.11878 3.47620 8 - -
17247 1.38629 1.38629 1.38629 1.38629
17248 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17249 9 2.93741 3.57306 0.11878 3.47620 9 - -
17250 1.38629 1.38629 1.38629 1.38629
17251 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17252 10 2.93741 3.57306 0.11878 3.47620 10 - -
17253 1.38629 1.38629 1.38629 1.38629
17254 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17255 11 3.07403 2.58586 3.12274 0.18104 11 - -
17256 1.38629 1.38629 1.38629 1.38629
17257 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17258 12 3.41643 0.13221 3.46659 2.81684 12 - -
17259 1.38629 1.38629 1.38629 1.38629
17260 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17261 13 3.07403 2.58586 3.12274 0.18104 13 - -
17262 1.38629 1.38629 1.38629 1.38629
17263 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17264 14 3.07403 2.58586 3.12274 0.18104 14 - -
17265 1.38629 1.38629 1.38629 1.38629
17266 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17267 15 3.07403 2.58586 3.12274 0.18104 15 - -
17268 1.38629 1.38629 1.38629 1.38629
17269 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17270 16 3.07403 2.58586 3.12274 0.18104 16 - -
17271 1.38629 1.38629 1.38629 1.38629
17272 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17273 17 3.41643 0.13221 3.46659 2.81684 17 - -
17274 1.38629 1.38629 1.38629 1.38629
17275 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17276 18 3.41643 0.13221 3.46659 2.81684 18 - -
17277 1.38629 1.38629 1.38629 1.38629
17278 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17279 19 2.93741 3.57306 0.11878 3.47620 19 - -
17280 1.38629 1.38629 1.38629 1.38629
17281 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17282 20 0.14382 3.36580 2.79252 3.26609 20 - -
17283 1.38629 1.38629 1.38629 1.38629
17284 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17285 21 2.93741 3.57306 0.11878 3.47620 21 - -
17286 1.38629 1.38629 1.38629 1.38629
17287 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17288 22 2.93741 3.57306 0.11878 3.47620 22 - -
17289 1.38629 1.38629 1.38629 1.38629
17290 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17291 23 3.07403 2.58586 3.12274 0.18104 23 - -
17292 1.38629 1.38629 1.38629 1.38629
17293 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17294 24 3.41643 0.13221 3.46659 2.81684 24 - -
17295 1.38629 1.38629 1.38629 1.38629
17296 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17297 25 0.14382 3.36580 2.79252 3.26609 25 - -
17298 1.38629 1.38629 1.38629 1.38629
17299 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17300 26 3.41643 0.13221 3.46659 2.81684 26 - -
17301 1.38629 1.38629 1.38629 1.38629
17302 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17303 27 0.14382 3.36580 2.79252 3.26609 27 - -
17304 1.38629 1.38629 1.38629 1.38629
17305 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17306 28 3.07403 2.58586 3.12274 0.18104 28 - -
17307 1.38629 1.38629 1.38629 1.38629
17308 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17309 29 3.41643 0.13221 3.46659 2.81684 29 - -
17310 1.38629 1.38629 1.38629 1.38629
17311 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17312 30 3.07403 2.58586 3.12274 0.18104 30 - -
17313 1.38629 1.38629 1.38629 1.38629
17314 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17315 31 2.93741 3.57306 0.11878 3.47620 31 - -
17316 1.38629 1.38629 1.38629 1.38629
17317 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17318 32 3.07403 2.58586 3.12274 0.18104 32 - -
17319 1.38629 1.38629 1.38629 1.38629
17320 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17321 33 3.41643 0.13221 3.46659 2.81684 33 - -
17322 1.38629 1.38629 1.38629 1.38629
17323 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17324 34 3.07403 2.58586 3.12274 0.18104 34 - -
17325 1.38629 1.38629 1.38629 1.38629
17326 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17327 35 2.93741 3.57306 0.11878 3.47620 35 - -
17328 1.38629 1.38629 1.38629 1.38629
17329 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17330 36 0.14382 3.36580 2.79252 3.26609 36 - -
17331 1.38629 1.38629 1.38629 1.38629
17332 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17333 37 2.93741 3.57306 0.11878 3.47620 37 - -
17334 1.38629 1.38629 1.38629 1.38629
17335 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17336 38 0.14382 3.36580 2.79252 3.26609 38 - -
17337 1.38629 1.38629 1.38629 1.38629
17338 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17339 39 2.93741 3.57306 0.11878 3.47620 39 - -
17340 1.38629 1.38629 1.38629 1.38629
17341 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17342 40 3.07403 2.58586 3.12274 0.18104 40 - -
17343 1.38629 1.38629 1.38629 1.38629
17344 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17345 41 3.07403 2.58586 3.12274 0.18104 41 - -
17346 1.38629 1.38629 1.38629 1.38629
17347 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17348 42 2.93741 3.57306 0.11878 3.47620 42 - -
17349 1.38629 1.38629 1.38629 1.38629
17350 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17351 43 0.14382 3.36580 2.79252 3.26609 43 - -
17352 1.38629 1.38629 1.38629 1.38629
17353 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17354 44 2.93741 3.57306 0.11878 3.47620 44 - -
17355 1.38629 1.38629 1.38629 1.38629
17356 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547
17357 45 0.14382 3.36580 2.79252 3.26609 45 - -
17358 1.38629 1.38629 1.38629 1.38629
17359 0.01877 3.98487 * 1.46634 0.26236 0.00000 *
17360 //
17361 HMMER3/b [3.0 | March 2010]
17362 NAME 3_End_Metazoa_58S_end_thirtyeight_long
17363 LENG 45
17364 ALPH DNA
17365 RF no
17366 CS no
17367 MAP yes
17368 DATE Sat Feb 25 14:44:30 2012
17369 NSEQ 3
17370 EFFN 3.000000
17371 CKSUM 3283497841
17372 STATS LOCAL MSV -8.1429 0.72002
17373 STATS LOCAL VITERBI -7.6801 0.72002
17374 STATS LOCAL FORWARD -4.0384 0.72002
17375 HMM A C G T
17376 m->m m->i m->d i->m i->i d->m d->d
17377 COMPO 1.72213 1.15515 1.25962 1.50263
17378 1.38629 1.38629 1.38629 1.38629
17379 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
17380 1 2.86982 3.47591 0.13017 3.36931 1 - -
17381 1.38629 1.38629 1.38629 1.38629
17382 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17383 2 3.30705 0.14631 3.36166 2.73626 2 - -
17384 1.38629 1.38629 1.38629 1.38629
17385 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17386 3 2.86982 3.47591 0.13017 3.36931 3 - -
17387 1.38629 1.38629 1.38629 1.38629
17388 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17389 4 2.86982 3.47591 0.13017 3.36931 4 - -
17390 1.38629 1.38629 1.38629 1.38629
17391 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17392 5 3.30705 0.14631 3.36166 2.73626 5 - -
17393 1.38629 1.38629 1.38629 1.38629
17394 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17395 6 0.15719 3.27118 2.73043 3.16274 6 - -
17396 1.38629 1.38629 1.38629 1.38629
17397 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17398 7 3.30705 0.14631 3.36166 2.73626 7 - -
17399 1.38629 1.38629 1.38629 1.38629
17400 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17401 8 2.97980 2.52563 3.03204 0.19727 8 - -
17402 1.38629 1.38629 1.38629 1.38629
17403 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17404 9 3.30705 0.14631 3.36166 2.73626 9 - -
17405 1.38629 1.38629 1.38629 1.38629
17406 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17407 10 2.97980 2.52563 3.03204 0.19727 10 - -
17408 1.38629 1.38629 1.38629 1.38629
17409 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17410 11 3.30705 0.14631 3.36166 2.73626 11 - -
17411 1.38629 1.38629 1.38629 1.38629
17412 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17413 12 0.15719 3.27118 2.73043 3.16274 12 - -
17414 1.38629 1.38629 1.38629 1.38629
17415 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17416 13 2.97980 2.52563 3.03204 0.19727 13 - -
17417 1.38629 1.38629 1.38629 1.38629
17418 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17419 14 2.86982 3.47591 0.13017 3.36931 14 - -
17420 1.38629 1.38629 1.38629 1.38629
17421 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17422 15 2.97980 2.52563 3.03204 0.19727 15 - -
17423 1.38629 1.38629 1.38629 1.38629
17424 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17425 16 2.86982 3.47591 0.13017 3.36931 16 - -
17426 1.38629 1.38629 1.38629 1.38629
17427 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17428 17 3.30705 0.14631 3.36166 2.73626 17 - -
17429 1.38629 1.38629 1.38629 1.38629
17430 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17431 18 2.97980 2.52563 3.03204 0.19727 18 - -
17432 1.38629 1.38629 1.38629 1.38629
17433 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17434 19 2.86982 3.47591 0.13017 3.36931 19 - -
17435 1.38629 1.38629 1.38629 1.38629
17436 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17437 20 3.30705 0.14631 3.36166 2.73626 20 - -
17438 1.38629 1.38629 1.38629 1.38629
17439 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17440 21 3.30705 0.14631 3.36166 2.73626 21 - -
17441 1.38629 1.38629 1.38629 1.38629
17442 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17443 22 2.86982 3.47591 0.13017 3.36931 22 - -
17444 1.38629 1.38629 1.38629 1.38629
17445 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17446 23 2.97980 2.52563 3.03204 0.19727 23 - -
17447 1.38629 1.38629 1.38629 1.38629
17448 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17449 24 3.30705 0.14631 3.36166 2.73626 24 - -
17450 1.38629 1.38629 1.38629 1.38629
17451 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17452 25 0.15719 3.27118 2.73043 3.16274 25 - -
17453 1.38629 1.38629 1.38629 1.38629
17454 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17455 26 3.30705 0.14631 3.36166 2.73626 26 - -
17456 1.38629 1.38629 1.38629 1.38629
17457 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17458 27 2.97980 2.52563 3.03204 0.19727 27 - -
17459 1.38629 1.38629 1.38629 1.38629
17460 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17461 28 3.30705 0.14631 3.36166 2.73626 28 - -
17462 1.38629 1.38629 1.38629 1.38629
17463 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17464 29 3.30705 0.14631 3.36166 2.73626 29 - -
17465 1.38629 1.38629 1.38629 1.38629
17466 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17467 30 2.97980 2.52563 3.03204 0.19727 30 - -
17468 1.38629 1.38629 1.38629 1.38629
17469 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17470 31 0.15719 3.27118 2.73043 3.16274 31 - -
17471 1.38629 1.38629 1.38629 1.38629
17472 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17473 32 3.30705 0.14631 3.36166 2.73626 32 - -
17474 1.38629 1.38629 1.38629 1.38629
17475 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17476 33 0.15719 3.27118 2.73043 3.16274 33 - -
17477 1.38629 1.38629 1.38629 1.38629
17478 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17479 34 3.30705 0.14631 3.36166 2.73626 34 - -
17480 1.38629 1.38629 1.38629 1.38629
17481 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17482 35 2.86982 3.47591 0.13017 3.36931 35 - -
17483 1.38629 1.38629 1.38629 1.38629
17484 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17485 36 0.15719 3.27118 2.73043 3.16274 36 - -
17486 1.38629 1.38629 1.38629 1.38629
17487 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17488 37 2.86982 3.47591 0.13017 3.36931 37 - -
17489 1.38629 1.38629 1.38629 1.38629
17490 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17491 38 2.86982 3.47591 0.13017 3.36931 38 - -
17492 1.38629 1.38629 1.38629 1.38629
17493 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17494 39 2.86982 3.47591 0.13017 3.36931 39 - -
17495 1.38629 1.38629 1.38629 1.38629
17496 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17497 40 2.97980 2.52563 3.03204 0.19727 40 - -
17498 1.38629 1.38629 1.38629 1.38629
17499 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17500 41 3.30705 0.14631 3.36166 2.73626 41 - -
17501 1.38629 1.38629 1.38629 1.38629
17502 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17503 42 2.86982 3.47591 0.13017 3.36931 42 - -
17504 1.38629 1.38629 1.38629 1.38629
17505 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17506 43 2.86982 3.47591 0.13017 3.36931 43 - -
17507 1.38629 1.38629 1.38629 1.38629
17508 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17509 44 0.15719 3.27118 2.73043 3.16274 44 - -
17510 1.38629 1.38629 1.38629 1.38629
17511 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17512 45 2.97980 2.52563 3.03204 0.19727 45 - -
17513 1.38629 1.38629 1.38629 1.38629
17514 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
17515 //
17516 HMMER3/b [3.0 | March 2010]
17517 NAME 3_End_Metazoa_58S_end_thirtyfive_long
17518 LENG 45
17519 ALPH DNA
17520 RF no
17521 CS no
17522 MAP yes
17523 DATE Sat Feb 25 14:44:02 2012
17524 NSEQ 6
17525 EFFN 3.606445
17526 CKSUM 1494175732
17527 STATS LOCAL MSV -7.4761 0.71932
17528 STATS LOCAL VITERBI -7.7902 0.71932
17529 STATS LOCAL FORWARD -4.1870 0.71932
17530 HMM A C G T
17531 m->m m->i m->d i->m i->i d->m d->d
17532 COMPO 1.89462 1.54545 1.24685 1.05268
17533 1.38629 1.38629 1.38629 1.38629
17534 0.03505 4.06155 4.06155 1.46634 0.26236 0.00000 *
17535 1 3.00708 3.67496 0.10805 3.58886 1 - -
17536 1.38629 1.38629 1.38629 1.38629
17537 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17538 2 3.53270 0.11893 3.57783 2.90095 2 - -
17539 1.38629 1.38629 1.38629 1.38629
17540 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17541 3 3.00708 3.67496 0.10805 3.58886 3 - -
17542 1.38629 1.38629 1.38629 1.38629
17543 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17544 4 3.53270 0.11893 3.57783 2.90095 4 - -
17545 1.38629 1.38629 1.38629 1.38629
17546 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17547 5 3.17699 2.65124 3.22173 0.16506 5 - -
17548 1.38629 1.38629 1.38629 1.38629
17549 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17550 6 3.00708 3.67496 0.10805 3.58886 6 - -
17551 1.38629 1.38629 1.38629 1.38629
17552 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17553 7 3.17699 2.65124 3.22173 0.16506 7 - -
17554 1.38629 1.38629 1.38629 1.38629
17555 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17556 8 3.17699 2.65124 3.22173 0.16506 8 - -
17557 1.38629 1.38629 1.38629 1.38629
17558 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17559 9 0.13096 3.46696 2.85796 3.37696 9 - -
17560 1.38629 1.38629 1.38629 1.38629
17561 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17562 10 3.00708 3.67496 0.10805 3.58886 10 - -
17563 1.38629 1.38629 1.38629 1.38629
17564 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17565 11 3.00708 3.67496 0.10805 3.58886 11 - -
17566 1.38629 1.38629 1.38629 1.38629
17567 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17568 12 0.95902 2.17958 2.19512 0.93573 12 - -
17569 1.38629 1.38629 1.38629 1.38629
17570 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17571 13 3.17699 2.65124 3.22173 0.16506 13 - -
17572 1.38629 1.38629 1.38629 1.38629
17573 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17574 14 3.17699 2.65124 3.22173 0.16506 14 - -
17575 1.38629 1.38629 1.38629 1.38629
17576 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17577 15 3.17699 2.65124 3.22173 0.16506 15 - -
17578 1.38629 1.38629 1.38629 1.38629
17579 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17580 16 3.53270 0.11893 3.57783 2.90095 16 - -
17581 1.38629 1.38629 1.38629 1.38629
17582 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17583 17 2.55182 0.58439 2.62299 1.23090 17 - -
17584 1.38629 1.38629 1.38629 1.38629
17585 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17586 18 3.17699 2.65124 3.22173 0.16506 18 - -
17587 1.38629 1.38629 1.38629 1.38629
17588 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17589 19 0.13096 3.46696 2.85796 3.37696 19 - -
17590 1.38629 1.38629 1.38629 1.38629
17591 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17592 20 3.00708 3.67496 0.10805 3.58886 20 - -
17593 1.38629 1.38629 1.38629 1.38629
17594 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17595 21 3.53270 0.11893 3.57783 2.90095 21 - -
17596 1.38629 1.38629 1.38629 1.38629
17597 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17598 22 0.13096 3.46696 2.85796 3.37696 22 - -
17599 1.38629 1.38629 1.38629 1.38629
17600 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17601 23 3.00708 3.67496 0.10805 3.58886 23 - -
17602 1.38629 1.38629 1.38629 1.38629
17603 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17604 24 3.53270 0.11893 3.57783 2.90095 24 - -
17605 1.38629 1.38629 1.38629 1.38629
17606 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17607 25 0.13096 3.46696 2.85796 3.37696 25 - -
17608 1.38629 1.38629 1.38629 1.38629
17609 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17610 26 3.17699 2.65124 3.22173 0.16506 26 - -
17611 1.38629 1.38629 1.38629 1.38629
17612 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17613 27 3.00708 3.67496 0.10805 3.58886 27 - -
17614 1.38629 1.38629 1.38629 1.38629
17615 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17616 28 3.17699 2.65124 3.22173 0.16506 28 - -
17617 1.38629 1.38629 1.38629 1.38629
17618 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17619 29 3.53270 0.11893 3.57783 2.90095 29 - -
17620 1.38629 1.38629 1.38629 1.38629
17621 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17622 30 3.17699 2.65124 3.22173 0.16506 30 - -
17623 1.38629 1.38629 1.38629 1.38629
17624 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17625 31 3.00708 3.67496 0.10805 3.58886 31 - -
17626 1.38629 1.38629 1.38629 1.38629
17627 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17628 32 3.17699 2.65124 3.22173 0.16506 32 - -
17629 1.38629 1.38629 1.38629 1.38629
17630 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17631 33 3.53270 0.11893 3.57783 2.90095 33 - -
17632 1.38629 1.38629 1.38629 1.38629
17633 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17634 34 3.17699 2.65124 3.22173 0.16506 34 - -
17635 1.38629 1.38629 1.38629 1.38629
17636 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17637 35 3.00708 3.67496 0.10805 3.58886 35 - -
17638 1.38629 1.38629 1.38629 1.38629
17639 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17640 36 0.13096 3.46696 2.85796 3.37696 36 - -
17641 1.38629 1.38629 1.38629 1.38629
17642 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17643 37 3.00708 3.67496 0.10805 3.58886 37 - -
17644 1.38629 1.38629 1.38629 1.38629
17645 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17646 38 3.17699 2.65124 3.22173 0.16506 38 - -
17647 1.38629 1.38629 1.38629 1.38629
17648 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17649 39 3.00708 3.67496 0.10805 3.58886 39 - -
17650 1.38629 1.38629 1.38629 1.38629
17651 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17652 40 3.17699 2.65124 3.22173 0.16506 40 - -
17653 1.38629 1.38629 1.38629 1.38629
17654 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17655 41 3.53270 0.11893 3.57783 2.90095 41 - -
17656 1.38629 1.38629 1.38629 1.38629
17657 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17658 42 3.00708 3.67496 0.10805 3.58886 42 - -
17659 1.38629 1.38629 1.38629 1.38629
17660 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17661 43 3.17699 2.65124 3.22173 0.16506 43 - -
17662 1.38629 1.38629 1.38629 1.38629
17663 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17664 44 3.17699 2.65124 3.22173 0.16506 44 - -
17665 1.38629 1.38629 1.38629 1.38629
17666 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547
17667 45 3.17699 2.65124 3.22173 0.16506 45 - -
17668 1.38629 1.38629 1.38629 1.38629
17669 0.01768 4.04418 * 1.46634 0.26236 0.00000 *
17670 //
17671 HMMER3/b [3.0 | March 2010]
17672 NAME 3_End_Metazoa_58S_end_thirtyfour_long
17673 LENG 45
17674 ALPH DNA
17675 RF no
17676 CS no
17677 MAP yes
17678 DATE Sat Feb 25 14:43:54 2012
17679 NSEQ 2
17680 EFFN 2.000000
17681 CKSUM 1862354267
17682 STATS LOCAL MSV -7.4990 0.72818
17683 STATS LOCAL VITERBI -8.2013 0.72818
17684 STATS LOCAL FORWARD -3.6550 0.72818
17685 HMM A C G T
17686 m->m m->i m->d i->m i->i d->m d->d
17687 COMPO 1.82028 1.51089 1.16534 1.18585
17688 1.38629 1.38629 1.38629 1.38629
17689 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
17690 1 2.57915 2.25909 2.64442 0.28946 1 - -
17691 1.38629 1.38629 1.38629 1.38629
17692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17693 2 2.53331 3.02441 0.20344 2.88069 2 - -
17694 1.38629 1.38629 1.38629 1.38629
17695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17696 3 2.53331 3.02441 0.20344 2.88069 3 - -
17697 1.38629 1.38629 1.38629 1.38629
17698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17699 4 2.81865 0.23582 2.88868 2.35662 4 - -
17700 1.38629 1.38629 1.38629 1.38629
17701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17702 5 2.53331 3.02441 0.20344 2.88069 5 - -
17703 1.38629 1.38629 1.38629 1.38629
17704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17705 6 2.81865 0.23582 2.88868 2.35662 6 - -
17706 1.38629 1.38629 1.38629 1.38629
17707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17708 7 2.57915 2.25909 2.64442 0.28946 7 - -
17709 1.38629 1.38629 1.38629 1.38629
17710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17711 8 2.57915 2.25909 2.64442 0.28946 8 - -
17712 1.38629 1.38629 1.38629 1.38629
17713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17714 9 2.57915 2.25909 2.64442 0.28946 9 - -
17715 1.38629 1.38629 1.38629 1.38629
17716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17717 10 2.53331 3.02441 0.20344 2.88069 10 - -
17718 1.38629 1.38629 1.38629 1.38629
17719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17720 11 0.23862 2.84929 2.43386 2.70756 11 - -
17721 1.38629 1.38629 1.38629 1.38629
17722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17723 12 2.53331 3.02441 0.20344 2.88069 12 - -
17724 1.38629 1.38629 1.38629 1.38629
17725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17726 13 2.81865 0.23582 2.88868 2.35662 13 - -
17727 1.38629 1.38629 1.38629 1.38629
17728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17729 14 2.57915 2.25909 2.64442 0.28946 14 - -
17730 1.38629 1.38629 1.38629 1.38629
17731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17732 15 2.57915 2.25909 2.64442 0.28946 15 - -
17733 1.38629 1.38629 1.38629 1.38629
17734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17735 16 2.53331 3.02441 0.20344 2.88069 16 - -
17736 1.38629 1.38629 1.38629 1.38629
17737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17738 17 2.81865 0.23582 2.88868 2.35662 17 - -
17739 1.38629 1.38629 1.38629 1.38629
17740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17741 18 2.57915 2.25909 2.64442 0.28946 18 - -
17742 1.38629 1.38629 1.38629 1.38629
17743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17744 19 2.81865 0.23582 2.88868 2.35662 19 - -
17745 1.38629 1.38629 1.38629 1.38629
17746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17747 20 0.23862 2.84929 2.43386 2.70756 20 - -
17748 1.38629 1.38629 1.38629 1.38629
17749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17750 21 0.23862 2.84929 2.43386 2.70756 21 - -
17751 1.38629 1.38629 1.38629 1.38629
17752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17753 22 2.53331 3.02441 0.20344 2.88069 22 - -
17754 1.38629 1.38629 1.38629 1.38629
17755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17756 23 2.53331 3.02441 0.20344 2.88069 23 - -
17757 1.38629 1.38629 1.38629 1.38629
17758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17759 24 2.81865 0.23582 2.88868 2.35662 24 - -
17760 1.38629 1.38629 1.38629 1.38629
17761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17762 25 0.23862 2.84929 2.43386 2.70756 25 - -
17763 1.38629 1.38629 1.38629 1.38629
17764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17765 26 2.57915 2.25909 2.64442 0.28946 26 - -
17766 1.38629 1.38629 1.38629 1.38629
17767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17768 27 2.53331 3.02441 0.20344 2.88069 27 - -
17769 1.38629 1.38629 1.38629 1.38629
17770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17771 28 2.57915 2.25909 2.64442 0.28946 28 - -
17772 1.38629 1.38629 1.38629 1.38629
17773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17774 29 2.81865 0.23582 2.88868 2.35662 29 - -
17775 1.38629 1.38629 1.38629 1.38629
17776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17777 30 2.57915 2.25909 2.64442 0.28946 30 - -
17778 1.38629 1.38629 1.38629 1.38629
17779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17780 31 2.53331 3.02441 0.20344 2.88069 31 - -
17781 1.38629 1.38629 1.38629 1.38629
17782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17783 32 2.57915 2.25909 2.64442 0.28946 32 - -
17784 1.38629 1.38629 1.38629 1.38629
17785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17786 33 2.81865 0.23582 2.88868 2.35662 33 - -
17787 1.38629 1.38629 1.38629 1.38629
17788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17789 34 2.57915 2.25909 2.64442 0.28946 34 - -
17790 1.38629 1.38629 1.38629 1.38629
17791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17792 35 2.53331 3.02441 0.20344 2.88069 35 - -
17793 1.38629 1.38629 1.38629 1.38629
17794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17795 36 0.23862 2.84929 2.43386 2.70756 36 - -
17796 1.38629 1.38629 1.38629 1.38629
17797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17798 37 2.53331 3.02441 0.20344 2.88069 37 - -
17799 1.38629 1.38629 1.38629 1.38629
17800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17801 38 2.53331 3.02441 0.20344 2.88069 38 - -
17802 1.38629 1.38629 1.38629 1.38629
17803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17804 39 2.53331 3.02441 0.20344 2.88069 39 - -
17805 1.38629 1.38629 1.38629 1.38629
17806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17807 40 2.57915 2.25909 2.64442 0.28946 40 - -
17808 1.38629 1.38629 1.38629 1.38629
17809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17810 41 2.81865 0.23582 2.88868 2.35662 41 - -
17811 1.38629 1.38629 1.38629 1.38629
17812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17813 42 2.53331 3.02441 0.20344 2.88069 42 - -
17814 1.38629 1.38629 1.38629 1.38629
17815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17816 43 2.57915 2.25909 2.64442 0.28946 43 - -
17817 1.38629 1.38629 1.38629 1.38629
17818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17819 44 2.57915 2.25909 2.64442 0.28946 44 - -
17820 1.38629 1.38629 1.38629 1.38629
17821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17822 45 2.57915 2.25909 2.64442 0.28946 45 - -
17823 1.38629 1.38629 1.38629 1.38629
17824 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
17825 //
17826 HMMER3/b [3.0 | March 2010]
17827 NAME 3_End_Metazoa_58S_end_thirtyninea_long
17828 LENG 45
17829 ALPH DNA
17830 RF no
17831 CS no
17832 MAP yes
17833 DATE Sat Feb 25 14:44:41 2012
17834 NSEQ 12
17835 EFFN 3.436523
17836 CKSUM 1305076398
17837 STATS LOCAL MSV -7.4447 0.71933
17838 STATS LOCAL VITERBI -7.6590 0.71933
17839 STATS LOCAL FORWARD -4.0283 0.71933
17840 HMM A C G T
17841 m->m m->i m->d i->m i->i d->m d->d
17842 COMPO 1.90049 1.11875 1.13599 1.59597
17843 1.38629 1.38629 1.38629 1.38629
17844 0.03613 4.03185 4.03185 1.46634 0.26236 0.00000 *
17845 1 2.97231 3.62392 0.11328 3.53237 1 - -
17846 1.38629 1.38629 1.38629 1.38629
17847 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17848 2 3.47427 0.12540 3.52197 2.85887 2 - -
17849 1.38629 1.38629 1.38629 1.38629
17850 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17851 3 2.97231 3.62392 0.11328 3.53237 3 - -
17852 1.38629 1.38629 1.38629 1.38629
17853 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17854 4 3.47427 0.12540 3.52197 2.85887 4 - -
17855 1.38629 1.38629 1.38629 1.38629
17856 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17857 5 3.12486 2.61817 3.17162 0.17294 5 - -
17858 1.38629 1.38629 1.38629 1.38629
17859 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17860 6 3.47427 0.12540 3.52197 2.85887 6 - -
17861 1.38629 1.38629 1.38629 1.38629
17862 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17863 7 2.97231 3.62392 0.11328 3.53237 7 - -
17864 1.38629 1.38629 1.38629 1.38629
17865 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17866 8 3.12486 2.61817 3.17162 0.17294 8 - -
17867 1.38629 1.38629 1.38629 1.38629
17868 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17869 9 3.47427 0.12540 3.52197 2.85887 9 - -
17870 1.38629 1.38629 1.38629 1.38629
17871 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17872 10 3.12486 2.61817 3.17162 0.17294 10 - -
17873 1.38629 1.38629 1.38629 1.38629
17874 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17875 11 3.47427 0.12540 3.52197 2.85887 11 - -
17876 1.38629 1.38629 1.38629 1.38629
17877 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17878 12 3.12486 2.61817 3.17162 0.17294 12 - -
17879 1.38629 1.38629 1.38629 1.38629
17880 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17881 13 2.45737 1.15240 2.52778 0.65657 13 - -
17882 1.38629 1.38629 1.38629 1.38629
17883 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17884 14 2.97231 3.62392 0.11328 3.53237 14 - -
17885 1.38629 1.38629 1.38629 1.38629
17886 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17887 15 3.47427 0.12540 3.52197 2.85887 15 - -
17888 1.38629 1.38629 1.38629 1.38629
17889 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17890 16 2.97231 3.62392 0.11328 3.53237 16 - -
17891 1.38629 1.38629 1.38629 1.38629
17892 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17893 17 0.13726 3.41603 2.82510 3.32110 17 - -
17894 1.38629 1.38629 1.38629 1.38629
17895 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17896 18 2.97231 3.62392 0.11328 3.53237 18 - -
17897 1.38629 1.38629 1.38629 1.38629
17898 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17899 19 2.97231 3.62392 0.11328 3.53237 19 - -
17900 1.38629 1.38629 1.38629 1.38629
17901 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17902 20 3.47427 0.12540 3.52197 2.85887 20 - -
17903 1.38629 1.38629 1.38629 1.38629
17904 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17905 21 2.97231 3.62392 0.11328 3.53237 21 - -
17906 1.38629 1.38629 1.38629 1.38629
17907 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17908 22 0.13726 3.41603 2.82510 3.32110 22 - -
17909 1.38629 1.38629 1.38629 1.38629
17910 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17911 23 2.97231 3.62392 0.11328 3.53237 23 - -
17912 1.38629 1.38629 1.38629 1.38629
17913 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17914 24 3.47427 0.12540 3.52197 2.85887 24 - -
17915 1.38629 1.38629 1.38629 1.38629
17916 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17917 25 0.13726 3.41603 2.82510 3.32110 25 - -
17918 1.38629 1.38629 1.38629 1.38629
17919 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17920 26 0.13726 3.41603 2.82510 3.32110 26 - -
17921 1.38629 1.38629 1.38629 1.38629
17922 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17923 27 2.97231 3.62392 0.11328 3.53237 27 - -
17924 1.38629 1.38629 1.38629 1.38629
17925 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17926 28 2.97231 3.62392 0.11328 3.53237 28 - -
17927 1.38629 1.38629 1.38629 1.38629
17928 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17929 29 3.47427 0.12540 3.52197 2.85887 29 - -
17930 1.38629 1.38629 1.38629 1.38629
17931 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17932 30 3.12486 2.61817 3.17162 0.17294 30 - -
17933 1.38629 1.38629 1.38629 1.38629
17934 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17935 31 2.97231 3.62392 0.11328 3.53237 31 - -
17936 1.38629 1.38629 1.38629 1.38629
17937 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17938 32 3.12486 2.61817 3.17162 0.17294 32 - -
17939 1.38629 1.38629 1.38629 1.38629
17940 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17941 33 3.47427 0.12540 3.52197 2.85887 33 - -
17942 1.38629 1.38629 1.38629 1.38629
17943 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17944 34 3.47427 0.12540 3.52197 2.85887 34 - -
17945 1.38629 1.38629 1.38629 1.38629
17946 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17947 35 2.97231 3.62392 0.11328 3.53237 35 - -
17948 1.38629 1.38629 1.38629 1.38629
17949 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17950 36 0.13726 3.41603 2.82510 3.32110 36 - -
17951 1.38629 1.38629 1.38629 1.38629
17952 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17953 37 2.97231 3.62392 0.11328 3.53237 37 - -
17954 1.38629 1.38629 1.38629 1.38629
17955 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17956 38 3.47427 0.12540 3.52197 2.85887 38 - -
17957 1.38629 1.38629 1.38629 1.38629
17958 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17959 39 2.97231 3.62392 0.11328 3.53237 39 - -
17960 1.38629 1.38629 1.38629 1.38629
17961 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17962 40 3.12486 2.61817 3.17162 0.17294 40 - -
17963 1.38629 1.38629 1.38629 1.38629
17964 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17965 41 3.47427 0.12540 3.52197 2.85887 41 - -
17966 1.38629 1.38629 1.38629 1.38629
17967 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17968 42 3.47427 0.12540 3.52197 2.85887 42 - -
17969 1.38629 1.38629 1.38629 1.38629
17970 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17971 43 1.11860 0.85853 2.17412 1.99678 43 - -
17972 1.38629 1.38629 1.38629 1.38629
17973 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17974 44 3.12486 2.61817 3.17162 0.17294 44 - -
17975 1.38629 1.38629 1.38629 1.38629
17976 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547
17977 45 2.86793 0.31108 2.93325 1.84958 45 - -
17978 1.38629 1.38629 1.38629 1.38629
17979 0.01823 4.01395 * 1.46634 0.26236 0.00000 *
17980 //
17981 HMMER3/b [3.0 | March 2010]
17982 NAME 3_End_Metazoa_58S_end_thirtynineb_long
17983 LENG 45
17984 ALPH DNA
17985 RF no
17986 CS no
17987 MAP yes
17988 DATE Sat Feb 25 14:44:48 2012
17989 NSEQ 4
17990 EFFN 3.113281
17991 CKSUM 2440900297
17992 STATS LOCAL MSV -7.9878 0.71931
17993 STATS LOCAL VITERBI -7.8835 0.71931
17994 STATS LOCAL FORWARD -3.7817 0.71931
17995 HMM A C G T
17996 m->m m->i m->d i->m i->i d->m d->d
17997 COMPO 1.92771 1.21126 1.04606 1.58291
17998 1.38629 1.38629 1.38629 1.38629
17999 0.03837 3.97279 3.97279 1.46634 0.26236 0.00000 *
18000 1 3.35293 0.14020 3.40571 2.77025 1 - -
18001 1.38629 1.38629 1.38629 1.38629
18002 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18003 2 2.89845 3.51682 0.12523 3.41426 2 - -
18004 1.38629 1.38629 1.38629 1.38629
18005 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18006 3 3.35293 0.14020 3.40571 2.77025 3 - -
18007 1.38629 1.38629 1.38629 1.38629
18008 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18009 4 3.01905 2.55078 3.06983 0.19031 4 - -
18010 1.38629 1.38629 1.38629 1.38629
18011 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18012 5 3.35293 0.14020 3.40571 2.77025 5 - -
18013 1.38629 1.38629 1.38629 1.38629
18014 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18015 6 2.89845 3.51682 0.12523 3.41426 6 - -
18016 1.38629 1.38629 1.38629 1.38629
18017 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18018 7 3.01905 2.55078 3.06983 0.19031 7 - -
18019 1.38629 1.38629 1.38629 1.38629
18020 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18021 8 3.35293 0.14020 3.40571 2.77025 8 - -
18022 1.38629 1.38629 1.38629 1.38629
18023 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18024 9 2.89845 3.51682 0.12523 3.41426 9 - -
18025 1.38629 1.38629 1.38629 1.38629
18026 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18027 10 3.35293 0.14020 3.40571 2.77025 10 - -
18028 1.38629 1.38629 1.38629 1.38629
18029 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18030 11 3.01905 2.55078 3.06983 0.19031 11 - -
18031 1.38629 1.38629 1.38629 1.38629
18032 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18033 12 3.01905 2.55078 3.06983 0.19031 12 - -
18034 1.38629 1.38629 1.38629 1.38629
18035 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18036 13 3.35293 0.14020 3.40571 2.77025 13 - -
18037 1.38629 1.38629 1.38629 1.38629
18038 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18039 14 2.89845 3.51682 0.12523 3.41426 14 - -
18040 1.38629 1.38629 1.38629 1.38629
18041 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18042 15 0.15142 3.31082 2.75657 3.20600 15 - -
18043 1.38629 1.38629 1.38629 1.38629
18044 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18045 16 2.89845 3.51682 0.12523 3.41426 16 - -
18046 1.38629 1.38629 1.38629 1.38629
18047 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18048 17 3.35293 0.14020 3.40571 2.77025 17 - -
18049 1.38629 1.38629 1.38629 1.38629
18050 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18051 18 2.89845 3.51682 0.12523 3.41426 18 - -
18052 1.38629 1.38629 1.38629 1.38629
18053 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18054 19 2.89845 3.51682 0.12523 3.41426 19 - -
18055 1.38629 1.38629 1.38629 1.38629
18056 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18057 20 3.35293 0.14020 3.40571 2.77025 20 - -
18058 1.38629 1.38629 1.38629 1.38629
18059 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18060 21 2.89845 3.51682 0.12523 3.41426 21 - -
18061 1.38629 1.38629 1.38629 1.38629
18062 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18063 22 0.15142 3.31082 2.75657 3.20600 22 - -
18064 1.38629 1.38629 1.38629 1.38629
18065 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18066 23 2.89845 3.51682 0.12523 3.41426 23 - -
18067 1.38629 1.38629 1.38629 1.38629
18068 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18069 24 3.35293 0.14020 3.40571 2.77025 24 - -
18070 1.38629 1.38629 1.38629 1.38629
18071 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18072 25 0.15142 3.31082 2.75657 3.20600 25 - -
18073 1.38629 1.38629 1.38629 1.38629
18074 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18075 26 3.01905 2.55078 3.06983 0.19031 26 - -
18076 1.38629 1.38629 1.38629 1.38629
18077 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18078 27 2.89845 3.51682 0.12523 3.41426 27 - -
18079 1.38629 1.38629 1.38629 1.38629
18080 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18081 28 2.89845 3.51682 0.12523 3.41426 28 - -
18082 1.38629 1.38629 1.38629 1.38629
18083 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18084 29 3.35293 0.14020 3.40571 2.77025 29 - -
18085 1.38629 1.38629 1.38629 1.38629
18086 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18087 30 3.35293 0.14020 3.40571 2.77025 30 - -
18088 1.38629 1.38629 1.38629 1.38629
18089 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18090 31 2.89845 3.51682 0.12523 3.41426 31 - -
18091 1.38629 1.38629 1.38629 1.38629
18092 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18093 32 2.89845 3.51682 0.12523 3.41426 32 - -
18094 1.38629 1.38629 1.38629 1.38629
18095 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18096 33 3.01905 2.55078 3.06983 0.19031 33 - -
18097 1.38629 1.38629 1.38629 1.38629
18098 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18099 34 3.35293 0.14020 3.40571 2.77025 34 - -
18100 1.38629 1.38629 1.38629 1.38629
18101 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18102 35 2.89845 3.51682 0.12523 3.41426 35 - -
18103 1.38629 1.38629 1.38629 1.38629
18104 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18105 36 0.15142 3.31082 2.75657 3.20600 36 - -
18106 1.38629 1.38629 1.38629 1.38629
18107 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18108 37 2.89845 3.51682 0.12523 3.41426 37 - -
18109 1.38629 1.38629 1.38629 1.38629
18110 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18111 38 0.15142 3.31082 2.75657 3.20600 38 - -
18112 1.38629 1.38629 1.38629 1.38629
18113 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18114 39 2.89845 3.51682 0.12523 3.41426 39 - -
18115 1.38629 1.38629 1.38629 1.38629
18116 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18117 40 3.01905 2.55078 3.06983 0.19031 40 - -
18118 1.38629 1.38629 1.38629 1.38629
18119 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18120 41 3.35293 0.14020 3.40571 2.77025 41 - -
18121 1.38629 1.38629 1.38629 1.38629
18122 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18123 42 3.35293 0.14020 3.40571 2.77025 42 - -
18124 1.38629 1.38629 1.38629 1.38629
18125 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18126 43 2.89845 3.51682 0.12523 3.41426 43 - -
18127 1.38629 1.38629 1.38629 1.38629
18128 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18129 44 3.01905 2.55078 3.06983 0.19031 44 - -
18130 1.38629 1.38629 1.38629 1.38629
18131 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547
18132 45 3.01905 2.55078 3.06983 0.19031 45 - -
18133 1.38629 1.38629 1.38629 1.38629
18134 0.01937 3.95379 * 1.46634 0.26236 0.00000 *
18135 //
18136 HMMER3/b [3.0 | March 2010]
18137 NAME 3_End_Metazoa_58S_end_thirtyone_long
18138 LENG 45
18139 ALPH DNA
18140 RF no
18141 CS no
18142 MAP yes
18143 DATE Sat Feb 25 14:43:29 2012
18144 NSEQ 30
18145 EFFN 3.629150
18146 CKSUM 1546314626
18147 STATS LOCAL MSV -7.4451 0.71931
18148 STATS LOCAL VITERBI -7.9191 0.71931
18149 STATS LOCAL FORWARD -4.0575 0.71931
18150 HMM A C G T
18151 m->m m->i m->d i->m i->i d->m d->d
18152 COMPO 2.27612 1.35205 1.13329 1.15000
18153 1.38629 1.38629 1.38629 1.38629
18154 0.03491 4.06546 4.06546 1.46634 0.26236 0.00000 *
18155 1 3.01153 3.68153 0.10740 3.59614 1 - -
18156 1.38629 1.38629 1.38629 1.38629
18157 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18158 2 3.54024 0.11813 3.58504 2.90636 2 - -
18159 1.38629 1.38629 1.38629 1.38629
18160 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18161 3 3.01153 3.68153 0.10740 3.59614 3 - -
18162 1.38629 1.38629 1.38629 1.38629
18163 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18164 4 3.54024 0.11813 3.58504 2.90636 4 - -
18165 1.38629 1.38629 1.38629 1.38629
18166 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18167 5 3.54024 0.11813 3.58504 2.90636 5 - -
18168 1.38629 1.38629 1.38629 1.38629
18169 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18170 6 3.01153 3.68153 0.10740 3.59614 6 - -
18171 1.38629 1.38629 1.38629 1.38629
18172 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18173 7 3.18379 2.65555 3.22826 0.16407 7 - -
18174 1.38629 1.38629 1.38629 1.38629
18175 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18176 8 3.18379 2.65555 3.22826 0.16407 8 - -
18177 1.38629 1.38629 1.38629 1.38629
18178 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18179 9 3.01153 3.68153 0.10740 3.59614 9 - -
18180 1.38629 1.38629 1.38629 1.38629
18181 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18182 10 3.01153 3.68153 0.10740 3.59614 10 - -
18183 1.38629 1.38629 1.38629 1.38629
18184 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18185 11 3.01153 3.68153 0.10740 3.59614 11 - -
18186 1.38629 1.38629 1.38629 1.38629
18187 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18188 12 3.18379 2.65555 3.22826 0.16407 12 - -
18189 1.38629 1.38629 1.38629 1.38629
18190 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18191 13 3.18379 2.65555 3.22826 0.16407 13 - -
18192 1.38629 1.38629 1.38629 1.38629
18193 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18194 14 3.18379 2.65555 3.22826 0.16407 14 - -
18195 1.38629 1.38629 1.38629 1.38629
18196 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18197 15 2.99319 2.20646 3.04534 0.23294 15 - -
18198 1.38629 1.38629 1.38629 1.38629
18199 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18200 16 3.54024 0.11813 3.58504 2.90636 16 - -
18201 1.38629 1.38629 1.38629 1.38629
18202 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18203 17 3.54024 0.11813 3.58504 2.90636 17 - -
18204 1.38629 1.38629 1.38629 1.38629
18205 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18206 18 3.54024 0.11813 3.58504 2.90636 18 - -
18207 1.38629 1.38629 1.38629 1.38629
18208 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18209 19 3.18379 2.65555 3.22826 0.16407 19 - -
18210 1.38629 1.38629 1.38629 1.38629
18211 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18212 20 3.18379 2.65555 3.22826 0.16407 20 - -
18213 1.38629 1.38629 1.38629 1.38629
18214 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18215 21 3.54024 0.11813 3.58504 2.90636 21 - -
18216 1.38629 1.38629 1.38629 1.38629
18217 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18218 22 3.01153 3.68153 0.10740 3.59614 22 - -
18219 1.38629 1.38629 1.38629 1.38629
18220 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18221 23 3.01153 3.68153 0.10740 3.59614 23 - -
18222 1.38629 1.38629 1.38629 1.38629
18223 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18224 24 3.54024 0.11813 3.58504 2.90636 24 - -
18225 1.38629 1.38629 1.38629 1.38629
18226 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18227 25 0.13017 3.47355 2.86220 3.38419 25 - -
18228 1.38629 1.38629 1.38629 1.38629
18229 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18230 26 3.54024 0.11813 3.58504 2.90636 26 - -
18231 1.38629 1.38629 1.38629 1.38629
18232 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18233 27 3.01153 3.68153 0.10740 3.59614 27 - -
18234 1.38629 1.38629 1.38629 1.38629
18235 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18236 28 3.18379 2.65555 3.22826 0.16407 28 - -
18237 1.38629 1.38629 1.38629 1.38629
18238 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18239 29 3.54024 0.11813 3.58504 2.90636 29 - -
18240 1.38629 1.38629 1.38629 1.38629
18241 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18242 30 3.18379 2.65555 3.22826 0.16407 30 - -
18243 1.38629 1.38629 1.38629 1.38629
18244 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18245 31 3.01153 3.68153 0.10740 3.59614 31 - -
18246 1.38629 1.38629 1.38629 1.38629
18247 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18248 32 3.01153 3.68153 0.10740 3.59614 32 - -
18249 1.38629 1.38629 1.38629 1.38629
18250 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18251 33 2.65178 1.53552 2.71648 0.43383 33 - -
18252 1.38629 1.38629 1.38629 1.38629
18253 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18254 34 3.18379 2.65555 3.22826 0.16407 34 - -
18255 1.38629 1.38629 1.38629 1.38629
18256 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18257 35 3.54024 0.11813 3.58504 2.90636 35 - -
18258 1.38629 1.38629 1.38629 1.38629
18259 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18260 36 0.13017 3.47355 2.86220 3.38419 36 - -
18261 1.38629 1.38629 1.38629 1.38629
18262 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18263 37 3.01153 3.68153 0.10740 3.59614 37 - -
18264 1.38629 1.38629 1.38629 1.38629
18265 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18266 38 3.01153 3.68153 0.10740 3.59614 38 - -
18267 1.38629 1.38629 1.38629 1.38629
18268 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18269 39 3.01153 3.68153 0.10740 3.59614 39 - -
18270 1.38629 1.38629 1.38629 1.38629
18271 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18272 40 3.18379 2.65555 3.22826 0.16407 40 - -
18273 1.38629 1.38629 1.38629 1.38629
18274 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18275 41 3.18379 2.65555 3.22826 0.16407 41 - -
18276 1.38629 1.38629 1.38629 1.38629
18277 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18278 42 3.01153 3.68153 0.10740 3.59614 42 - -
18279 1.38629 1.38629 1.38629 1.38629
18280 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18281 43 3.18379 2.65555 3.22826 0.16407 43 - -
18282 1.38629 1.38629 1.38629 1.38629
18283 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18284 44 1.66647 2.28859 2.45050 0.47252 44 - -
18285 1.38629 1.38629 1.38629 1.38629
18286 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547
18287 45 0.77729 2.22981 2.20691 1.13084 45 - -
18288 1.38629 1.38629 1.38629 1.38629
18289 0.01761 4.04815 * 1.46634 0.26236 0.00000 *
18290 //
18291 HMMER3/b [3.0 | March 2010]
18292 NAME 3_End_Metazoa_58S_end_thirtyseven_long
18293 LENG 45
18294 ALPH DNA
18295 RF no
18296 CS no
18297 MAP yes
18298 DATE Sat Feb 25 14:44:20 2012
18299 NSEQ 4
18300 EFFN 3.277344
18301 CKSUM 3008892434
18302 STATS LOCAL MSV -8.0837 0.71933
18303 STATS LOCAL VITERBI -7.8221 0.71933
18304 STATS LOCAL FORWARD -4.2716 0.71933
18305 HMM A C G T
18306 m->m m->i m->d i->m i->i d->m d->d
18307 COMPO 1.47281 1.61226 1.25134 1.25470
18308 1.38629 1.38629 1.38629 1.38629
18309 0.03720 4.00321 4.00321 1.46634 0.26236 0.00000 *
18310 1 3.41625 0.13224 3.46642 2.81671 1 - -
18311 1.38629 1.38629 1.38629 1.38629
18312 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18313 2 3.07387 2.58576 3.12259 0.18107 2 - -
18314 1.38629 1.38629 1.38629 1.38629
18315 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18316 3 3.07387 2.58576 3.12259 0.18107 3 - -
18317 1.38629 1.38629 1.38629 1.38629
18318 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18319 4 3.07387 2.58576 3.12259 0.18107 4 - -
18320 1.38629 1.38629 1.38629 1.38629
18321 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18322 5 2.93730 3.57289 0.11880 3.47603 5 - -
18323 1.38629 1.38629 1.38629 1.38629
18324 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18325 6 2.93730 3.57289 0.11880 3.47603 6 - -
18326 1.38629 1.38629 1.38629 1.38629
18327 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18328 7 3.07387 2.58576 3.12259 0.18107 7 - -
18329 1.38629 1.38629 1.38629 1.38629
18330 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18331 8 3.07387 2.58576 3.12259 0.18107 8 - -
18332 1.38629 1.38629 1.38629 1.38629
18333 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18334 9 0.14384 3.36564 2.79241 3.26592 9 - -
18335 1.38629 1.38629 1.38629 1.38629
18336 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18337 10 2.93730 3.57289 0.11880 3.47603 10 - -
18338 1.38629 1.38629 1.38629 1.38629
18339 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18340 11 3.41625 0.13224 3.46642 2.81671 11 - -
18341 1.38629 1.38629 1.38629 1.38629
18342 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18343 12 0.14384 3.36564 2.79241 3.26592 12 - -
18344 1.38629 1.38629 1.38629 1.38629
18345 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18346 13 0.14384 3.36564 2.79241 3.26592 13 - -
18347 1.38629 1.38629 1.38629 1.38629
18348 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18349 14 3.07387 2.58576 3.12259 0.18107 14 - -
18350 1.38629 1.38629 1.38629 1.38629
18351 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18352 15 0.14384 3.36564 2.79241 3.26592 15 - -
18353 1.38629 1.38629 1.38629 1.38629
18354 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18355 16 0.14384 3.36564 2.79241 3.26592 16 - -
18356 1.38629 1.38629 1.38629 1.38629
18357 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18358 17 3.41625 0.13224 3.46642 2.81671 17 - -
18359 1.38629 1.38629 1.38629 1.38629
18360 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18361 18 3.07387 2.58576 3.12259 0.18107 18 - -
18362 1.38629 1.38629 1.38629 1.38629
18363 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18364 19 0.14384 3.36564 2.79241 3.26592 19 - -
18365 1.38629 1.38629 1.38629 1.38629
18366 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18367 20 2.93730 3.57289 0.11880 3.47603 20 - -
18368 1.38629 1.38629 1.38629 1.38629
18369 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18370 21 0.14384 3.36564 2.79241 3.26592 21 - -
18371 1.38629 1.38629 1.38629 1.38629
18372 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18373 22 2.93730 3.57289 0.11880 3.47603 22 - -
18374 1.38629 1.38629 1.38629 1.38629
18375 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18376 23 3.41625 0.13224 3.46642 2.81671 23 - -
18377 1.38629 1.38629 1.38629 1.38629
18378 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18379 24 3.41625 0.13224 3.46642 2.81671 24 - -
18380 1.38629 1.38629 1.38629 1.38629
18381 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18382 25 3.07387 2.58576 3.12259 0.18107 25 - -
18383 1.38629 1.38629 1.38629 1.38629
18384 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18385 26 3.07387 2.58576 3.12259 0.18107 26 - -
18386 1.38629 1.38629 1.38629 1.38629
18387 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18388 27 2.93730 3.57289 0.11880 3.47603 27 - -
18389 1.38629 1.38629 1.38629 1.38629
18390 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18391 28 3.41625 0.13224 3.46642 2.81671 28 - -
18392 1.38629 1.38629 1.38629 1.38629
18393 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18394 29 3.41625 0.13224 3.46642 2.81671 29 - -
18395 1.38629 1.38629 1.38629 1.38629
18396 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18397 30 3.07387 2.58576 3.12259 0.18107 30 - -
18398 1.38629 1.38629 1.38629 1.38629
18399 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18400 31 2.93730 3.57289 0.11880 3.47603 31 - -
18401 1.38629 1.38629 1.38629 1.38629
18402 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18403 32 3.07387 2.58576 3.12259 0.18107 32 - -
18404 1.38629 1.38629 1.38629 1.38629
18405 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18406 33 0.14384 3.36564 2.79241 3.26592 33 - -
18407 1.38629 1.38629 1.38629 1.38629
18408 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18409 34 3.07387 2.58576 3.12259 0.18107 34 - -
18410 1.38629 1.38629 1.38629 1.38629
18411 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18412 35 2.93730 3.57289 0.11880 3.47603 35 - -
18413 1.38629 1.38629 1.38629 1.38629
18414 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18415 36 0.14384 3.36564 2.79241 3.26592 36 - -
18416 1.38629 1.38629 1.38629 1.38629
18417 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18418 37 2.93730 3.57289 0.11880 3.47603 37 - -
18419 1.38629 1.38629 1.38629 1.38629
18420 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18421 38 2.93730 3.57289 0.11880 3.47603 38 - -
18422 1.38629 1.38629 1.38629 1.38629
18423 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18424 39 2.93730 3.57289 0.11880 3.47603 39 - -
18425 1.38629 1.38629 1.38629 1.38629
18426 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18427 40 3.07387 2.58576 3.12259 0.18107 40 - -
18428 1.38629 1.38629 1.38629 1.38629
18429 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18430 41 3.41625 0.13224 3.46642 2.81671 41 - -
18431 1.38629 1.38629 1.38629 1.38629
18432 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18433 42 2.93730 3.57289 0.11880 3.47603 42 - -
18434 1.38629 1.38629 1.38629 1.38629
18435 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18436 43 2.93730 3.57289 0.11880 3.47603 43 - -
18437 1.38629 1.38629 1.38629 1.38629
18438 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18439 44 0.14384 3.36564 2.79241 3.26592 44 - -
18440 1.38629 1.38629 1.38629 1.38629
18441 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547
18442 45 3.07387 2.58576 3.12259 0.18107 45 - -
18443 1.38629 1.38629 1.38629 1.38629
18444 0.01877 3.98478 * 1.46634 0.26236 0.00000 *
18445 //
18446 HMMER3/b [3.0 | March 2010]
18447 NAME 3_End_Metazoa_58S_end_thirtysix_long
18448 LENG 45
18449 ALPH DNA
18450 RF no
18451 CS no
18452 MAP yes
18453 DATE Sat Feb 25 14:44:13 2012
18454 NSEQ 4
18455 EFFN 3.386719
18456 CKSUM 43523732
18457 STATS LOCAL MSV -7.1538 0.71932
18458 STATS LOCAL VITERBI -7.5801 0.71932
18459 STATS LOCAL FORWARD -4.0824 0.71932
18460 HMM A C G T
18461 m->m m->i m->d i->m i->i d->m d->d
18462 COMPO 1.46898 1.58365 1.24528 1.28462
18463 1.38629 1.38629 1.38629 1.38629
18464 0.03646 4.02298 4.02298 1.46634 0.26236 0.00000 *
18465 1 2.96162 3.60830 0.11494 3.51511 1 - -
18466 1.38629 1.38629 1.38629 1.38629
18467 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18468 2 2.96162 3.60830 0.11494 3.51511 2 - -
18469 1.38629 1.38629 1.38629 1.38629
18470 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18471 3 3.45647 0.12746 3.50493 2.84597 3 - -
18472 1.38629 1.38629 1.38629 1.38629
18473 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18474 4 0.13925 3.40055 2.81508 3.30414 4 - -
18475 1.38629 1.38629 1.38629 1.38629
18476 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18477 5 3.45647 0.12746 3.50493 2.84597 5 - -
18478 1.38629 1.38629 1.38629 1.38629
18479 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18480 6 3.45647 0.12746 3.50493 2.84597 6 - -
18481 1.38629 1.38629 1.38629 1.38629
18482 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18483 7 3.10913 2.60819 3.15650 0.17540 7 - -
18484 1.38629 1.38629 1.38629 1.38629
18485 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18486 8 0.13925 3.40055 2.81508 3.30414 8 - -
18487 1.38629 1.38629 1.38629 1.38629
18488 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18489 9 3.10913 2.60819 3.15650 0.17540 9 - -
18490 1.38629 1.38629 1.38629 1.38629
18491 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18492 10 2.96162 3.60830 0.11494 3.51511 10 - -
18493 1.38629 1.38629 1.38629 1.38629
18494 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18495 11 0.13925 3.40055 2.81508 3.30414 11 - -
18496 1.38629 1.38629 1.38629 1.38629
18497 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18498 12 3.10913 2.60819 3.15650 0.17540 12 - -
18499 1.38629 1.38629 1.38629 1.38629
18500 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18501 13 0.13925 3.40055 2.81508 3.30414 13 - -
18502 1.38629 1.38629 1.38629 1.38629
18503 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18504 14 0.13925 3.40055 2.81508 3.30414 14 - -
18505 1.38629 1.38629 1.38629 1.38629
18506 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18507 15 3.45647 0.12746 3.50493 2.84597 15 - -
18508 1.38629 1.38629 1.38629 1.38629
18509 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18510 16 3.45647 0.12746 3.50493 2.84597 16 - -
18511 1.38629 1.38629 1.38629 1.38629
18512 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18513 17 3.10913 2.60819 3.15650 0.17540 17 - -
18514 1.38629 1.38629 1.38629 1.38629
18515 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18516 18 3.45647 0.12746 3.50493 2.84597 18 - -
18517 1.38629 1.38629 1.38629 1.38629
18518 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18519 19 0.13925 3.40055 2.81508 3.30414 19 - -
18520 1.38629 1.38629 1.38629 1.38629
18521 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18522 20 3.10913 2.60819 3.15650 0.17540 20 - -
18523 1.38629 1.38629 1.38629 1.38629
18524 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18525 21 2.96162 3.60830 0.11494 3.51511 21 - -
18526 1.38629 1.38629 1.38629 1.38629
18527 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18528 22 2.96162 3.60830 0.11494 3.51511 22 - -
18529 1.38629 1.38629 1.38629 1.38629
18530 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18531 23 2.96162 3.60830 0.11494 3.51511 23 - -
18532 1.38629 1.38629 1.38629 1.38629
18533 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18534 24 3.10913 2.60819 3.15650 0.17540 24 - -
18535 1.38629 1.38629 1.38629 1.38629
18536 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18537 25 0.13925 3.40055 2.81508 3.30414 25 - -
18538 1.38629 1.38629 1.38629 1.38629
18539 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18540 26 3.10913 2.60819 3.15650 0.17540 26 - -
18541 1.38629 1.38629 1.38629 1.38629
18542 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18543 27 2.96162 3.60830 0.11494 3.51511 27 - -
18544 1.38629 1.38629 1.38629 1.38629
18545 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18546 28 3.10913 2.60819 3.15650 0.17540 28 - -
18547 1.38629 1.38629 1.38629 1.38629
18548 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18549 29 3.45647 0.12746 3.50493 2.84597 29 - -
18550 1.38629 1.38629 1.38629 1.38629
18551 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18552 30 3.10913 2.60819 3.15650 0.17540 30 - -
18553 1.38629 1.38629 1.38629 1.38629
18554 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18555 31 2.96162 3.60830 0.11494 3.51511 31 - -
18556 1.38629 1.38629 1.38629 1.38629
18557 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18558 32 2.96162 3.60830 0.11494 3.51511 32 - -
18559 1.38629 1.38629 1.38629 1.38629
18560 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18561 33 2.41679 0.95546 2.48875 0.81386 33 - -
18562 1.38629 1.38629 1.38629 1.38629
18563 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18564 34 3.10913 2.60819 3.15650 0.17540 34 - -
18565 1.38629 1.38629 1.38629 1.38629
18566 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18567 35 2.96162 3.60830 0.11494 3.51511 35 - -
18568 1.38629 1.38629 1.38629 1.38629
18569 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18570 36 0.13925 3.40055 2.81508 3.30414 36 - -
18571 1.38629 1.38629 1.38629 1.38629
18572 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18573 37 2.96162 3.60830 0.11494 3.51511 37 - -
18574 1.38629 1.38629 1.38629 1.38629
18575 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18576 38 2.96162 3.60830 0.11494 3.51511 38 - -
18577 1.38629 1.38629 1.38629 1.38629
18578 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18579 39 2.96162 3.60830 0.11494 3.51511 39 - -
18580 1.38629 1.38629 1.38629 1.38629
18581 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18582 40 3.10913 2.60819 3.15650 0.17540 40 - -
18583 1.38629 1.38629 1.38629 1.38629
18584 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18585 41 3.45647 0.12746 3.50493 2.84597 41 - -
18586 1.38629 1.38629 1.38629 1.38629
18587 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18588 42 3.10913 2.60819 3.15650 0.17540 42 - -
18589 1.38629 1.38629 1.38629 1.38629
18590 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18591 43 0.13925 3.40055 2.81508 3.30414 43 - -
18592 1.38629 1.38629 1.38629 1.38629
18593 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18594 44 0.13925 3.40055 2.81508 3.30414 44 - -
18595 1.38629 1.38629 1.38629 1.38629
18596 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
18597 45 3.10913 2.60819 3.15650 0.17540 45 - -
18598 1.38629 1.38629 1.38629 1.38629
18599 0.01839 4.00492 * 1.46634 0.26236 0.00000 *
18600 //
18601 HMMER3/b [3.0 | March 2010]
18602 NAME 3_End_Metazoa_58S_end_thirtythree_long
18603 LENG 45
18604 ALPH DNA
18605 RF no
18606 CS no
18607 MAP yes
18608 DATE Sat Feb 25 14:43:45 2012
18609 NSEQ 2
18610 EFFN 2.000000
18611 CKSUM 4245904999
18612 STATS LOCAL MSV -7.5548 0.72784
18613 STATS LOCAL VITERBI -8.4188 0.72784
18614 STATS LOCAL FORWARD -3.0671 0.72784
18615 HMM A C G T
18616 m->m m->i m->d i->m i->i d->m d->d
18617 COMPO 1.73881 1.39367 1.16744 1.32824
18618 1.38629 1.38629 1.38629 1.38629
18619 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
18620 1 2.81865 0.23582 2.88868 2.35662 1 - -
18621 1.38629 1.38629 1.38629 1.38629
18622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18623 2 2.53331 3.02441 0.20344 2.88069 2 - -
18624 1.38629 1.38629 1.38629 1.38629
18625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18626 3 2.81865 0.23582 2.88868 2.35662 3 - -
18627 1.38629 1.38629 1.38629 1.38629
18628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18629 4 2.81865 0.23582 2.88868 2.35662 4 - -
18630 1.38629 1.38629 1.38629 1.38629
18631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18632 5 0.23862 2.84929 2.43386 2.70756 5 - -
18633 1.38629 1.38629 1.38629 1.38629
18634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18635 6 2.81865 0.23582 2.88868 2.35662 6 - -
18636 1.38629 1.38629 1.38629 1.38629
18637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18638 7 0.23862 2.84929 2.43386 2.70756 7 - -
18639 1.38629 1.38629 1.38629 1.38629
18640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18641 8 2.53331 3.02441 0.20344 2.88069 8 - -
18642 1.38629 1.38629 1.38629 1.38629
18643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18644 9 2.53331 3.02441 0.20344 2.88069 9 - -
18645 1.38629 1.38629 1.38629 1.38629
18646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18647 10 2.53331 3.02441 0.20344 2.88069 10 - -
18648 1.38629 1.38629 1.38629 1.38629
18649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18650 11 2.57915 2.25909 2.64442 0.28946 11 - -
18651 1.38629 1.38629 1.38629 1.38629
18652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18653 12 2.57915 2.25909 2.64442 0.28946 12 - -
18654 1.38629 1.38629 1.38629 1.38629
18655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18656 13 2.57915 2.25909 2.64442 0.28946 13 - -
18657 1.38629 1.38629 1.38629 1.38629
18658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18659 14 0.23862 2.84929 2.43386 2.70756 14 - -
18660 1.38629 1.38629 1.38629 1.38629
18661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18662 15 2.81865 0.23582 2.88868 2.35662 15 - -
18663 1.38629 1.38629 1.38629 1.38629
18664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18665 16 2.57915 2.25909 2.64442 0.28946 16 - -
18666 1.38629 1.38629 1.38629 1.38629
18667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18668 17 2.81865 0.23582 2.88868 2.35662 17 - -
18669 1.38629 1.38629 1.38629 1.38629
18670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18671 18 2.57915 2.25909 2.64442 0.28946 18 - -
18672 1.38629 1.38629 1.38629 1.38629
18673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18674 19 2.53331 3.02441 0.20344 2.88069 19 - -
18675 1.38629 1.38629 1.38629 1.38629
18676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18677 20 2.57915 2.25909 2.64442 0.28946 20 - -
18678 1.38629 1.38629 1.38629 1.38629
18679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18680 21 2.53331 3.02441 0.20344 2.88069 21 - -
18681 1.38629 1.38629 1.38629 1.38629
18682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18683 22 2.53331 3.02441 0.20344 2.88069 22 - -
18684 1.38629 1.38629 1.38629 1.38629
18685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18686 23 2.81865 0.23582 2.88868 2.35662 23 - -
18687 1.38629 1.38629 1.38629 1.38629
18688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18689 24 0.23862 2.84929 2.43386 2.70756 24 - -
18690 1.38629 1.38629 1.38629 1.38629
18691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18692 25 2.81865 0.23582 2.88868 2.35662 25 - -
18693 1.38629 1.38629 1.38629 1.38629
18694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18695 26 2.53331 3.02441 0.20344 2.88069 26 - -
18696 1.38629 1.38629 1.38629 1.38629
18697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18698 27 2.81865 0.23582 2.88868 2.35662 27 - -
18699 1.38629 1.38629 1.38629 1.38629
18700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18701 28 2.81865 0.23582 2.88868 2.35662 28 - -
18702 1.38629 1.38629 1.38629 1.38629
18703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18704 29 2.57915 2.25909 2.64442 0.28946 29 - -
18705 1.38629 1.38629 1.38629 1.38629
18706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18707 30 2.53331 3.02441 0.20344 2.88069 30 - -
18708 1.38629 1.38629 1.38629 1.38629
18709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18710 31 2.53331 3.02441 0.20344 2.88069 31 - -
18711 1.38629 1.38629 1.38629 1.38629
18712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18713 32 2.53331 3.02441 0.20344 2.88069 32 - -
18714 1.38629 1.38629 1.38629 1.38629
18715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18716 33 2.57915 2.25909 2.64442 0.28946 33 - -
18717 1.38629 1.38629 1.38629 1.38629
18718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18719 34 2.57915 2.25909 2.64442 0.28946 34 - -
18720 1.38629 1.38629 1.38629 1.38629
18721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18722 35 2.81865 0.23582 2.88868 2.35662 35 - -
18723 1.38629 1.38629 1.38629 1.38629
18724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18725 36 0.23862 2.84929 2.43386 2.70756 36 - -
18726 1.38629 1.38629 1.38629 1.38629
18727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18728 37 2.53331 3.02441 0.20344 2.88069 37 - -
18729 1.38629 1.38629 1.38629 1.38629
18730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18731 38 2.53331 3.02441 0.20344 2.88069 38 - -
18732 1.38629 1.38629 1.38629 1.38629
18733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18734 39 2.53331 3.02441 0.20344 2.88069 39 - -
18735 1.38629 1.38629 1.38629 1.38629
18736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18737 40 2.57915 2.25909 2.64442 0.28946 40 - -
18738 1.38629 1.38629 1.38629 1.38629
18739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18740 41 2.57915 2.25909 2.64442 0.28946 41 - -
18741 1.38629 1.38629 1.38629 1.38629
18742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18743 42 2.53331 3.02441 0.20344 2.88069 42 - -
18744 1.38629 1.38629 1.38629 1.38629
18745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18746 43 2.57915 2.25909 2.64442 0.28946 43 - -
18747 1.38629 1.38629 1.38629 1.38629
18748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18749 44 0.23862 2.84929 2.43386 2.70756 44 - -
18750 1.38629 1.38629 1.38629 1.38629
18751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18752 45 2.57915 2.25909 2.64442 0.28946 45 - -
18753 1.38629 1.38629 1.38629 1.38629
18754 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
18755 //
18756 HMMER3/b [3.0 | March 2010]
18757 NAME 3_End_Metazoa_58S_end_thirtytwo_long
18758 LENG 45
18759 ALPH DNA
18760 RF no
18761 CS no
18762 MAP yes
18763 DATE Sat Feb 25 14:43:38 2012
18764 NSEQ 10
18765 EFFN 3.803711
18766 CKSUM 2157164048
18767 STATS LOCAL MSV -6.7794 0.71932
18768 STATS LOCAL VITERBI -7.8237 0.71932
18769 STATS LOCAL FORWARD -3.9341 0.71932
18770 HMM A C G T
18771 m->m m->i m->d i->m i->i d->m d->d
18772 COMPO 2.09383 1.36487 1.18062 1.15746
18773 1.38629 1.38629 1.38629 1.38629
18774 0.03388 4.09496 4.09496 1.46634 0.26236 0.00000 *
18775 1 3.04443 3.73013 0.10270 3.65003 1 - -
18776 1.38629 1.38629 1.38629 1.38629
18777 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18778 2 3.59624 0.11233 3.63850 2.94634 2 - -
18779 1.38629 1.38629 1.38629 1.38629
18780 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18781 3 3.59624 0.11233 3.63850 2.94634 3 - -
18782 1.38629 1.38629 1.38629 1.38629
18783 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18784 4 3.04443 3.73013 0.10270 3.65003 4 - -
18785 1.38629 1.38629 1.38629 1.38629
18786 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18787 5 3.23469 2.68782 3.27717 0.15681 5 - -
18788 1.38629 1.38629 1.38629 1.38629
18789 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18790 6 3.23469 2.68782 3.27717 0.15681 6 - -
18791 1.38629 1.38629 1.38629 1.38629
18792 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18793 7 3.04443 3.73013 0.10270 3.65003 7 - -
18794 1.38629 1.38629 1.38629 1.38629
18795 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18796 8 3.04443 3.73013 0.10270 3.65003 8 - -
18797 1.38629 1.38629 1.38629 1.38629
18798 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18799 9 3.04443 3.73013 0.10270 3.65003 9 - -
18800 1.38629 1.38629 1.38629 1.38629
18801 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18802 10 0.31629 2.96999 1.82122 2.84699 10 - -
18803 1.38629 1.38629 1.38629 1.38629
18804 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18805 11 2.64834 1.45078 2.71369 0.46434 11 - -
18806 1.38629 1.38629 1.38629 1.38629
18807 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18808 12 3.23469 2.68782 3.27717 0.15681 12 - -
18809 1.38629 1.38629 1.38629 1.38629
18810 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18811 13 0.12445 3.52261 2.89373 3.43808 13 - -
18812 1.38629 1.38629 1.38629 1.38629
18813 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18814 14 2.48935 0.93066 2.56039 0.80863 14 - -
18815 1.38629 1.38629 1.38629 1.38629
18816 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18817 15 3.23469 2.68782 3.27717 0.15681 15 - -
18818 1.38629 1.38629 1.38629 1.38629
18819 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18820 16 3.59624 0.11233 3.63850 2.94634 16 - -
18821 1.38629 1.38629 1.38629 1.38629
18822 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18823 17 3.59624 0.11233 3.63850 2.94634 17 - -
18824 1.38629 1.38629 1.38629 1.38629
18825 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18826 18 3.59624 0.11233 3.63850 2.94634 18 - -
18827 1.38629 1.38629 1.38629 1.38629
18828 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18829 19 3.23469 2.68782 3.27717 0.15681 19 - -
18830 1.38629 1.38629 1.38629 1.38629
18831 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18832 20 3.23469 2.68782 3.27717 0.15681 20 - -
18833 1.38629 1.38629 1.38629 1.38629
18834 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18835 21 3.59624 0.11233 3.63850 2.94634 21 - -
18836 1.38629 1.38629 1.38629 1.38629
18837 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18838 22 3.04443 3.73013 0.10270 3.65003 22 - -
18839 1.38629 1.38629 1.38629 1.38629
18840 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18841 23 3.04443 3.73013 0.10270 3.65003 23 - -
18842 1.38629 1.38629 1.38629 1.38629
18843 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18844 24 3.59624 0.11233 3.63850 2.94634 24 - -
18845 1.38629 1.38629 1.38629 1.38629
18846 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18847 25 0.12445 3.52261 2.89373 3.43808 25 - -
18848 1.38629 1.38629 1.38629 1.38629
18849 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18850 26 3.59624 0.11233 3.63850 2.94634 26 - -
18851 1.38629 1.38629 1.38629 1.38629
18852 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18853 27 3.04443 3.73013 0.10270 3.65003 27 - -
18854 1.38629 1.38629 1.38629 1.38629
18855 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18856 28 3.23469 2.68782 3.27717 0.15681 28 - -
18857 1.38629 1.38629 1.38629 1.38629
18858 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18859 29 3.59624 0.11233 3.63850 2.94634 29 - -
18860 1.38629 1.38629 1.38629 1.38629
18861 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18862 30 3.23469 2.68782 3.27717 0.15681 30 - -
18863 1.38629 1.38629 1.38629 1.38629
18864 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18865 31 3.04443 3.73013 0.10270 3.65003 31 - -
18866 1.38629 1.38629 1.38629 1.38629
18867 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18868 32 3.04443 3.73013 0.10270 3.65003 32 - -
18869 1.38629 1.38629 1.38629 1.38629
18870 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18871 33 2.77923 1.70594 2.84012 0.35969 33 - -
18872 1.38629 1.38629 1.38629 1.38629
18873 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18874 34 3.23469 2.68782 3.27717 0.15681 34 - -
18875 1.38629 1.38629 1.38629 1.38629
18876 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18877 35 3.59624 0.11233 3.63850 2.94634 35 - -
18878 1.38629 1.38629 1.38629 1.38629
18879 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18880 36 0.12445 3.52261 2.89373 3.43808 36 - -
18881 1.38629 1.38629 1.38629 1.38629
18882 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18883 37 3.04443 3.73013 0.10270 3.65003 37 - -
18884 1.38629 1.38629 1.38629 1.38629
18885 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18886 38 3.04443 3.73013 0.10270 3.65003 38 - -
18887 1.38629 1.38629 1.38629 1.38629
18888 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18889 39 3.04443 3.73013 0.10270 3.65003 39 - -
18890 1.38629 1.38629 1.38629 1.38629
18891 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18892 40 3.23469 2.68782 3.27717 0.15681 40 - -
18893 1.38629 1.38629 1.38629 1.38629
18894 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18895 41 3.23469 2.68782 3.27717 0.15681 41 - -
18896 1.38629 1.38629 1.38629 1.38629
18897 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18898 42 3.04443 3.73013 0.10270 3.65003 42 - -
18899 1.38629 1.38629 1.38629 1.38629
18900 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18901 43 2.48935 0.93066 2.56039 0.80863 43 - -
18902 1.38629 1.38629 1.38629 1.38629
18903 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18904 44 3.23469 2.68782 3.27717 0.15681 44 - -
18905 1.38629 1.38629 1.38629 1.38629
18906 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547
18907 45 3.23469 2.68782 3.27717 0.15681 45 - -
18908 1.38629 1.38629 1.38629 1.38629
18909 0.01708 4.07817 * 1.46634 0.26236 0.00000 *
18910 //
18911 HMMER3/b [3.0 | March 2010]
18912 NAME 3_End_Metazoa_58S_end_three_long
18913 LENG 45
18914 ALPH DNA
18915 RF no
18916 CS no
18917 MAP yes
18918 DATE Sat Feb 25 14:32:10 2012
18919 NSEQ 12
18920 EFFN 3.149414
18921 CKSUM 2840327789
18922 STATS LOCAL MSV -7.9812 0.71931
18923 STATS LOCAL VITERBI -7.6469 0.71931
18924 STATS LOCAL FORWARD -4.0771 0.71931
18925 HMM A C G T
18926 m->m m->i m->d i->m i->i d->m d->d
18927 COMPO 1.63594 1.21124 1.19814 1.58159
18928 1.38629 1.38629 1.38629 1.38629
18929 0.03810 3.97957 3.97957 1.46634 0.26236 0.00000 *
18930 1 2.90726 3.52948 0.12374 3.42820 1 - -
18931 1.38629 1.38629 1.38629 1.38629
18932 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18933 2 3.36719 0.13835 3.41939 2.78075 2 - -
18934 1.38629 1.38629 1.38629 1.38629
18935 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18936 3 2.90726 3.52948 0.12374 3.42820 3 - -
18937 1.38629 1.38629 1.38629 1.38629
18938 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18939 4 2.90726 3.52948 0.12374 3.42820 4 - -
18940 1.38629 1.38629 1.38629 1.38629
18941 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18942 5 3.03132 2.55863 3.08165 0.18819 5 - -
18943 1.38629 1.38629 1.38629 1.38629
18944 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18945 6 0.14968 3.32315 2.76467 3.21947 6 - -
18946 1.38629 1.38629 1.38629 1.38629
18947 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18948 7 3.03132 2.55863 3.08165 0.18819 7 - -
18949 1.38629 1.38629 1.38629 1.38629
18950 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18951 8 3.36719 0.13835 3.41939 2.78075 8 - -
18952 1.38629 1.38629 1.38629 1.38629
18953 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18954 9 2.90726 3.52948 0.12374 3.42820 9 - -
18955 1.38629 1.38629 1.38629 1.38629
18956 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18957 10 2.90726 3.52948 0.12374 3.42820 10 - -
18958 1.38629 1.38629 1.38629 1.38629
18959 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18960 11 2.90726 3.52948 0.12374 3.42820 11 - -
18961 1.38629 1.38629 1.38629 1.38629
18962 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18963 12 3.36719 0.13835 3.41939 2.78075 12 - -
18964 1.38629 1.38629 1.38629 1.38629
18965 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18966 13 3.36719 0.13835 3.41939 2.78075 13 - -
18967 1.38629 1.38629 1.38629 1.38629
18968 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18969 14 3.36719 0.13835 3.41939 2.78075 14 - -
18970 1.38629 1.38629 1.38629 1.38629
18971 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18972 15 2.90726 3.52948 0.12374 3.42820 15 - -
18973 1.38629 1.38629 1.38629 1.38629
18974 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18975 16 3.36719 0.13835 3.41939 2.78075 16 - -
18976 1.38629 1.38629 1.38629 1.38629
18977 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18978 17 3.03132 2.55863 3.08165 0.18819 17 - -
18979 1.38629 1.38629 1.38629 1.38629
18980 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18981 18 3.36719 0.13835 3.41939 2.78075 18 - -
18982 1.38629 1.38629 1.38629 1.38629
18983 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18984 19 2.90726 3.52948 0.12374 3.42820 19 - -
18985 1.38629 1.38629 1.38629 1.38629
18986 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18987 20 0.14968 3.32315 2.76467 3.21947 20 - -
18988 1.38629 1.38629 1.38629 1.38629
18989 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18990 21 3.03132 2.55863 3.08165 0.18819 21 - -
18991 1.38629 1.38629 1.38629 1.38629
18992 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18993 22 0.14968 3.32315 2.76467 3.21947 22 - -
18994 1.38629 1.38629 1.38629 1.38629
18995 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18996 23 3.36719 0.13835 3.41939 2.78075 23 - -
18997 1.38629 1.38629 1.38629 1.38629
18998 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
18999 24 3.36719 0.13835 3.41939 2.78075 24 - -
19000 1.38629 1.38629 1.38629 1.38629
19001 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19002 25 0.14968 3.32315 2.76467 3.21947 25 - -
19003 1.38629 1.38629 1.38629 1.38629
19004 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19005 26 3.36719 0.13835 3.41939 2.78075 26 - -
19006 1.38629 1.38629 1.38629 1.38629
19007 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19008 27 2.90726 3.52948 0.12374 3.42820 27 - -
19009 1.38629 1.38629 1.38629 1.38629
19010 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19011 28 3.36719 0.13835 3.41939 2.78075 28 - -
19012 1.38629 1.38629 1.38629 1.38629
19013 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19014 29 3.36719 0.13835 3.41939 2.78075 29 - -
19015 1.38629 1.38629 1.38629 1.38629
19016 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19017 30 3.03132 2.55863 3.08165 0.18819 30 - -
19018 1.38629 1.38629 1.38629 1.38629
19019 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19020 31 0.14968 3.32315 2.76467 3.21947 31 - -
19021 1.38629 1.38629 1.38629 1.38629
19022 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19023 32 3.03132 2.55863 3.08165 0.18819 32 - -
19024 1.38629 1.38629 1.38629 1.38629
19025 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19026 33 3.36719 0.13835 3.41939 2.78075 33 - -
19027 1.38629 1.38629 1.38629 1.38629
19028 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19029 34 3.03132 2.55863 3.08165 0.18819 34 - -
19030 1.38629 1.38629 1.38629 1.38629
19031 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19032 35 2.90726 3.52948 0.12374 3.42820 35 - -
19033 1.38629 1.38629 1.38629 1.38629
19034 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19035 36 0.14968 3.32315 2.76467 3.21947 36 - -
19036 1.38629 1.38629 1.38629 1.38629
19037 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19038 37 2.90726 3.52948 0.12374 3.42820 37 - -
19039 1.38629 1.38629 1.38629 1.38629
19040 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19041 38 2.90726 3.52948 0.12374 3.42820 38 - -
19042 1.38629 1.38629 1.38629 1.38629
19043 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19044 39 2.90726 3.52948 0.12374 3.42820 39 - -
19045 1.38629 1.38629 1.38629 1.38629
19046 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19047 40 3.03132 2.55863 3.08165 0.18819 40 - -
19048 1.38629 1.38629 1.38629 1.38629
19049 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19050 41 3.36719 0.13835 3.41939 2.78075 41 - -
19051 1.38629 1.38629 1.38629 1.38629
19052 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19053 42 2.90726 3.52948 0.12374 3.42820 42 - -
19054 1.38629 1.38629 1.38629 1.38629
19055 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19056 43 0.14968 3.32315 2.76467 3.21947 43 - -
19057 1.38629 1.38629 1.38629 1.38629
19058 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19059 44 0.14968 3.32315 2.76467 3.21947 44 - -
19060 1.38629 1.38629 1.38629 1.38629
19061 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547
19062 45 3.03132 2.55863 3.08165 0.18819 45 - -
19063 1.38629 1.38629 1.38629 1.38629
19064 0.01923 3.96070 * 1.46634 0.26236 0.00000 *
19065 //
19066 HMMER3/b [3.0 | March 2010]
19067 NAME 3_End_Metazoa_58S_end_twelve_long
19068 LENG 45
19069 ALPH DNA
19070 RF no
19071 CS no
19072 MAP yes
19073 DATE Sat Feb 25 14:37:51 2012
19074 NSEQ 2
19075 EFFN 2.000000
19076 CKSUM 1458850192
19077 STATS LOCAL MSV -7.6216 0.72751
19078 STATS LOCAL VITERBI -8.2841 0.72751
19079 STATS LOCAL FORWARD -3.4635 0.72751
19080 HMM A C G T
19081 m->m m->i m->d i->m i->i d->m d->d
19082 COMPO 1.59062 1.34929 1.16405 1.49362
19083 1.38629 1.38629 1.38629 1.38629
19084 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
19085 1 2.53331 3.02441 0.20344 2.88069 1 - -
19086 1.38629 1.38629 1.38629 1.38629
19087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19088 2 2.81865 0.23582 2.88868 2.35662 2 - -
19089 1.38629 1.38629 1.38629 1.38629
19090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19091 3 2.53331 3.02441 0.20344 2.88069 3 - -
19092 1.38629 1.38629 1.38629 1.38629
19093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19094 4 2.53331 3.02441 0.20344 2.88069 4 - -
19095 1.38629 1.38629 1.38629 1.38629
19096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19097 5 2.81865 0.23582 2.88868 2.35662 5 - -
19098 1.38629 1.38629 1.38629 1.38629
19099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19100 6 2.57915 2.25909 2.64442 0.28946 6 - -
19101 1.38629 1.38629 1.38629 1.38629
19102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19103 7 2.81865 0.23582 2.88868 2.35662 7 - -
19104 1.38629 1.38629 1.38629 1.38629
19105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19106 8 2.57915 2.25909 2.64442 0.28946 8 - -
19107 1.38629 1.38629 1.38629 1.38629
19108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19109 9 2.53331 3.02441 0.20344 2.88069 9 - -
19110 1.38629 1.38629 1.38629 1.38629
19111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19112 10 2.53331 3.02441 0.20344 2.88069 10 - -
19113 1.38629 1.38629 1.38629 1.38629
19114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19115 11 2.53331 3.02441 0.20344 2.88069 11 - -
19116 1.38629 1.38629 1.38629 1.38629
19117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19118 12 2.57915 2.25909 2.64442 0.28946 12 - -
19119 1.38629 1.38629 1.38629 1.38629
19120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19121 13 0.23862 2.84929 2.43386 2.70756 13 - -
19122 1.38629 1.38629 1.38629 1.38629
19123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19124 14 2.81865 0.23582 2.88868 2.35662 14 - -
19125 1.38629 1.38629 1.38629 1.38629
19126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19127 15 2.57915 2.25909 2.64442 0.28946 15 - -
19128 1.38629 1.38629 1.38629 1.38629
19129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19130 16 2.81865 0.23582 2.88868 2.35662 16 - -
19131 1.38629 1.38629 1.38629 1.38629
19132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19133 17 2.81865 0.23582 2.88868 2.35662 17 - -
19134 1.38629 1.38629 1.38629 1.38629
19135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19136 18 2.81865 0.23582 2.88868 2.35662 18 - -
19137 1.38629 1.38629 1.38629 1.38629
19138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19139 19 0.23862 2.84929 2.43386 2.70756 19 - -
19140 1.38629 1.38629 1.38629 1.38629
19141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19142 20 2.53331 3.02441 0.20344 2.88069 20 - -
19143 1.38629 1.38629 1.38629 1.38629
19144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19145 21 0.23862 2.84929 2.43386 2.70756 21 - -
19146 1.38629 1.38629 1.38629 1.38629
19147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19148 22 2.53331 3.02441 0.20344 2.88069 22 - -
19149 1.38629 1.38629 1.38629 1.38629
19150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19151 23 2.57915 2.25909 2.64442 0.28946 23 - -
19152 1.38629 1.38629 1.38629 1.38629
19153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19154 24 2.81865 0.23582 2.88868 2.35662 24 - -
19155 1.38629 1.38629 1.38629 1.38629
19156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19157 25 0.23862 2.84929 2.43386 2.70756 25 - -
19158 1.38629 1.38629 1.38629 1.38629
19159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19160 26 2.81865 0.23582 2.88868 2.35662 26 - -
19161 1.38629 1.38629 1.38629 1.38629
19162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19163 27 2.53331 3.02441 0.20344 2.88069 27 - -
19164 1.38629 1.38629 1.38629 1.38629
19165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19166 28 2.57915 2.25909 2.64442 0.28946 28 - -
19167 1.38629 1.38629 1.38629 1.38629
19168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19169 29 2.57915 2.25909 2.64442 0.28946 29 - -
19170 1.38629 1.38629 1.38629 1.38629
19171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19172 30 2.81865 0.23582 2.88868 2.35662 30 - -
19173 1.38629 1.38629 1.38629 1.38629
19174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19175 31 2.53331 3.02441 0.20344 2.88069 31 - -
19176 1.38629 1.38629 1.38629 1.38629
19177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19178 32 2.81865 0.23582 2.88868 2.35662 32 - -
19179 1.38629 1.38629 1.38629 1.38629
19180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19181 33 2.57915 2.25909 2.64442 0.28946 33 - -
19182 1.38629 1.38629 1.38629 1.38629
19183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19184 34 2.57915 2.25909 2.64442 0.28946 34 - -
19185 1.38629 1.38629 1.38629 1.38629
19186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19187 35 2.53331 3.02441 0.20344 2.88069 35 - -
19188 1.38629 1.38629 1.38629 1.38629
19189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19190 36 0.23862 2.84929 2.43386 2.70756 36 - -
19191 1.38629 1.38629 1.38629 1.38629
19192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19193 37 2.53331 3.02441 0.20344 2.88069 37 - -
19194 1.38629 1.38629 1.38629 1.38629
19195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19196 38 2.53331 3.02441 0.20344 2.88069 38 - -
19197 1.38629 1.38629 1.38629 1.38629
19198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19199 39 2.53331 3.02441 0.20344 2.88069 39 - -
19200 1.38629 1.38629 1.38629 1.38629
19201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19202 40 2.57915 2.25909 2.64442 0.28946 40 - -
19203 1.38629 1.38629 1.38629 1.38629
19204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19205 41 2.81865 0.23582 2.88868 2.35662 41 - -
19206 1.38629 1.38629 1.38629 1.38629
19207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19208 42 2.53331 3.02441 0.20344 2.88069 42 - -
19209 1.38629 1.38629 1.38629 1.38629
19210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19211 43 0.23862 2.84929 2.43386 2.70756 43 - -
19212 1.38629 1.38629 1.38629 1.38629
19213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19214 44 0.23862 2.84929 2.43386 2.70756 44 - -
19215 1.38629 1.38629 1.38629 1.38629
19216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19217 45 0.23862 2.84929 2.43386 2.70756 45 - -
19218 1.38629 1.38629 1.38629 1.38629
19219 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
19220 //
19221 HMMER3/b [3.0 | March 2010]
19222 NAME 3_End_Metazoa_58S_end_twenty_long
19223 LENG 45
19224 ALPH DNA
19225 RF no
19226 CS no
19227 MAP yes
19228 DATE Sat Feb 25 14:41:23 2012
19229 NSEQ 8
19230 EFFN 3.410156
19231 CKSUM 3299966898
19232 STATS LOCAL MSV -7.1470 0.71933
19233 STATS LOCAL VITERBI -7.8187 0.71933
19234 STATS LOCAL FORWARD -3.7441 0.71933
19235 HMM A C G T
19236 m->m m->i m->d i->m i->i d->m d->d
19237 COMPO 1.60947 1.21747 1.18790 1.61360
19238 1.38629 1.38629 1.38629 1.38629
19239 0.03630 4.02716 4.02716 1.46634 0.26236 0.00000 *
19240 1 2.96668 3.61569 0.11415 3.52327 1 - -
19241 1.38629 1.38629 1.38629 1.38629
19242 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19243 2 3.11656 2.61290 3.16364 0.17424 2 - -
19244 1.38629 1.38629 1.38629 1.38629
19245 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19246 3 3.46489 0.12648 3.51299 2.85207 3 - -
19247 1.38629 1.38629 1.38629 1.38629
19248 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19249 4 3.46489 0.12648 3.51299 2.85207 4 - -
19250 1.38629 1.38629 1.38629 1.38629
19251 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19252 5 2.96668 3.61569 0.11415 3.52327 5 - -
19253 1.38629 1.38629 1.38629 1.38629
19254 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19255 6 3.11656 2.61290 3.16364 0.17424 6 - -
19256 1.38629 1.38629 1.38629 1.38629
19257 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19258 7 2.96668 3.61569 0.11415 3.52327 7 - -
19259 1.38629 1.38629 1.38629 1.38629
19260 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19261 8 2.96668 3.61569 0.11415 3.52327 8 - -
19262 1.38629 1.38629 1.38629 1.38629
19263 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19264 9 0.13830 3.40786 2.81982 3.31216 9 - -
19265 1.38629 1.38629 1.38629 1.38629
19266 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19267 10 2.96668 3.61569 0.11415 3.52327 10 - -
19268 1.38629 1.38629 1.38629 1.38629
19269 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19270 11 0.13830 3.40786 2.81982 3.31216 11 - -
19271 1.38629 1.38629 1.38629 1.38629
19272 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19273 12 1.19698 1.21537 2.03661 1.30629 12 - -
19274 1.38629 1.38629 1.38629 1.38629
19275 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19276 13 0.13830 3.40786 2.81982 3.31216 13 - -
19277 1.38629 1.38629 1.38629 1.38629
19278 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19279 14 2.46929 0.67848 2.54147 1.11104 14 - -
19280 1.38629 1.38629 1.38629 1.38629
19281 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19282 15 0.13830 3.40786 2.81982 3.31216 15 - -
19283 1.38629 1.38629 1.38629 1.38629
19284 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19285 16 3.11656 2.61290 3.16364 0.17424 16 - -
19286 1.38629 1.38629 1.38629 1.38629
19287 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19288 17 3.46489 0.12648 3.51299 2.85207 17 - -
19289 1.38629 1.38629 1.38629 1.38629
19290 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19291 18 3.46489 0.12648 3.51299 2.85207 18 - -
19292 1.38629 1.38629 1.38629 1.38629
19293 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19294 19 0.13830 3.40786 2.81982 3.31216 19 - -
19295 1.38629 1.38629 1.38629 1.38629
19296 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19297 20 2.96668 3.61569 0.11415 3.52327 20 - -
19298 1.38629 1.38629 1.38629 1.38629
19299 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19300 21 2.96668 3.61569 0.11415 3.52327 21 - -
19301 1.38629 1.38629 1.38629 1.38629
19302 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19303 22 0.13830 3.40786 2.81982 3.31216 22 - -
19304 1.38629 1.38629 1.38629 1.38629
19305 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19306 23 3.46489 0.12648 3.51299 2.85207 23 - -
19307 1.38629 1.38629 1.38629 1.38629
19308 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19309 24 3.46489 0.12648 3.51299 2.85207 24 - -
19310 1.38629 1.38629 1.38629 1.38629
19311 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19312 25 0.13830 3.40786 2.81982 3.31216 25 - -
19313 1.38629 1.38629 1.38629 1.38629
19314 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19315 26 3.46489 0.12648 3.51299 2.85207 26 - -
19316 1.38629 1.38629 1.38629 1.38629
19317 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19318 27 3.11656 2.61290 3.16364 0.17424 27 - -
19319 1.38629 1.38629 1.38629 1.38629
19320 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19321 28 3.46489 0.12648 3.51299 2.85207 28 - -
19322 1.38629 1.38629 1.38629 1.38629
19323 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19324 29 3.46489 0.12648 3.51299 2.85207 29 - -
19325 1.38629 1.38629 1.38629 1.38629
19326 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19327 30 3.11656 2.61290 3.16364 0.17424 30 - -
19328 1.38629 1.38629 1.38629 1.38629
19329 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19330 31 2.96668 3.61569 0.11415 3.52327 31 - -
19331 1.38629 1.38629 1.38629 1.38629
19332 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19333 32 3.11656 2.61290 3.16364 0.17424 32 - -
19334 1.38629 1.38629 1.38629 1.38629
19335 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19336 33 3.46489 0.12648 3.51299 2.85207 33 - -
19337 1.38629 1.38629 1.38629 1.38629
19338 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19339 34 3.11656 2.61290 3.16364 0.17424 34 - -
19340 1.38629 1.38629 1.38629 1.38629
19341 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19342 35 2.96668 3.61569 0.11415 3.52327 35 - -
19343 1.38629 1.38629 1.38629 1.38629
19344 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19345 36 0.13830 3.40786 2.81982 3.31216 36 - -
19346 1.38629 1.38629 1.38629 1.38629
19347 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19348 37 2.96668 3.61569 0.11415 3.52327 37 - -
19349 1.38629 1.38629 1.38629 1.38629
19350 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19351 38 2.96668 3.61569 0.11415 3.52327 38 - -
19352 1.38629 1.38629 1.38629 1.38629
19353 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19354 39 2.96668 3.61569 0.11415 3.52327 39 - -
19355 1.38629 1.38629 1.38629 1.38629
19356 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19357 40 3.46489 0.12648 3.51299 2.85207 40 - -
19358 1.38629 1.38629 1.38629 1.38629
19359 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19360 41 3.46489 0.12648 3.51299 2.85207 41 - -
19361 1.38629 1.38629 1.38629 1.38629
19362 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19363 42 2.96668 3.61569 0.11415 3.52327 42 - -
19364 1.38629 1.38629 1.38629 1.38629
19365 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19366 43 2.96668 3.61569 0.11415 3.52327 43 - -
19367 1.38629 1.38629 1.38629 1.38629
19368 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19369 44 3.46489 0.12648 3.51299 2.85207 44 - -
19370 1.38629 1.38629 1.38629 1.38629
19371 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
19372 45 3.11656 2.61290 3.16364 0.17424 45 - -
19373 1.38629 1.38629 1.38629 1.38629
19374 0.01832 4.00918 * 1.46634 0.26236 0.00000 *
19375 //
19376 HMMER3/b [3.0 | March 2010]
19377 NAME 3_End_Metazoa_58S_end_twentyeight_long
19378 LENG 45
19379 ALPH DNA
19380 RF no
19381 CS no
19382 MAP yes
19383 DATE Sat Feb 25 14:42:55 2012
19384 NSEQ 2
19385 EFFN 2.000000
19386 CKSUM 3131929729
19387 STATS LOCAL MSV -7.4499 0.72770
19388 STATS LOCAL VITERBI -8.1418 0.72770
19389 STATS LOCAL FORWARD -3.7577 0.72770
19390 HMM A C G T
19391 m->m m->i m->d i->m i->i d->m d->d
19392 COMPO 1.59063 1.34506 1.21353 1.43325
19393 1.38629 1.38629 1.38629 1.38629
19394 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
19395 1 2.53331 3.02441 0.20344 2.88069 1 - -
19396 1.38629 1.38629 1.38629 1.38629
19397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19398 2 2.81865 0.23582 2.88868 2.35662 2 - -
19399 1.38629 1.38629 1.38629 1.38629
19400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19401 3 2.53331 3.02441 0.20344 2.88069 3 - -
19402 1.38629 1.38629 1.38629 1.38629
19403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19404 4 2.57915 2.25909 2.64442 0.28946 4 - -
19405 1.38629 1.38629 1.38629 1.38629
19406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19407 5 2.81865 0.23582 2.88868 2.35662 5 - -
19408 1.38629 1.38629 1.38629 1.38629
19409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19410 6 2.53331 3.02441 0.20344 2.88069 6 - -
19411 1.38629 1.38629 1.38629 1.38629
19412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19413 7 0.23862 2.84929 2.43386 2.70756 7 - -
19414 1.38629 1.38629 1.38629 1.38629
19415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19416 8 2.57915 2.25909 2.64442 0.28946 8 - -
19417 1.38629 1.38629 1.38629 1.38629
19418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19419 9 2.81865 0.23582 2.88868 2.35662 9 - -
19420 1.38629 1.38629 1.38629 1.38629
19421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19422 10 0.23862 2.84929 2.43386 2.70756 10 - -
19423 1.38629 1.38629 1.38629 1.38629
19424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19425 11 0.23862 2.84929 2.43386 2.70756 11 - -
19426 1.38629 1.38629 1.38629 1.38629
19427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19428 12 0.23862 2.84929 2.43386 2.70756 12 - -
19429 1.38629 1.38629 1.38629 1.38629
19430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19431 13 2.81865 0.23582 2.88868 2.35662 13 - -
19432 1.38629 1.38629 1.38629 1.38629
19433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19434 14 0.23862 2.84929 2.43386 2.70756 14 - -
19435 1.38629 1.38629 1.38629 1.38629
19436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19437 15 2.57915 2.25909 2.64442 0.28946 15 - -
19438 1.38629 1.38629 1.38629 1.38629
19439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19440 16 2.53331 3.02441 0.20344 2.88069 16 - -
19441 1.38629 1.38629 1.38629 1.38629
19442 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19443 17 2.57915 2.25909 2.64442 0.28946 17 - -
19444 1.38629 1.38629 1.38629 1.38629
19445 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19446 18 2.81865 0.23582 2.88868 2.35662 18 - -
19447 1.38629 1.38629 1.38629 1.38629
19448 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19449 19 2.53331 3.02441 0.20344 2.88069 19 - -
19450 1.38629 1.38629 1.38629 1.38629
19451 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19452 20 2.53331 3.02441 0.20344 2.88069 20 - -
19453 1.38629 1.38629 1.38629 1.38629
19454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19455 21 2.81865 0.23582 2.88868 2.35662 21 - -
19456 1.38629 1.38629 1.38629 1.38629
19457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19458 22 2.53331 3.02441 0.20344 2.88069 22 - -
19459 1.38629 1.38629 1.38629 1.38629
19460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19461 23 2.81865 0.23582 2.88868 2.35662 23 - -
19462 1.38629 1.38629 1.38629 1.38629
19463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19464 24 2.57915 2.25909 2.64442 0.28946 24 - -
19465 1.38629 1.38629 1.38629 1.38629
19466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19467 25 0.23862 2.84929 2.43386 2.70756 25 - -
19468 1.38629 1.38629 1.38629 1.38629
19469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19470 26 2.81865 0.23582 2.88868 2.35662 26 - -
19471 1.38629 1.38629 1.38629 1.38629
19472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19473 27 2.53331 3.02441 0.20344 2.88069 27 - -
19474 1.38629 1.38629 1.38629 1.38629
19475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19476 28 2.81865 0.23582 2.88868 2.35662 28 - -
19477 1.38629 1.38629 1.38629 1.38629
19478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19479 29 2.81865 0.23582 2.88868 2.35662 29 - -
19480 1.38629 1.38629 1.38629 1.38629
19481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19482 30 2.57915 2.25909 2.64442 0.28946 30 - -
19483 1.38629 1.38629 1.38629 1.38629
19484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19485 31 2.53331 3.02441 0.20344 2.88069 31 - -
19486 1.38629 1.38629 1.38629 1.38629
19487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19488 32 2.57915 2.25909 2.64442 0.28946 32 - -
19489 1.38629 1.38629 1.38629 1.38629
19490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19491 33 2.81865 0.23582 2.88868 2.35662 33 - -
19492 1.38629 1.38629 1.38629 1.38629
19493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19494 34 2.57915 2.25909 2.64442 0.28946 34 - -
19495 1.38629 1.38629 1.38629 1.38629
19496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19497 35 2.53331 3.02441 0.20344 2.88069 35 - -
19498 1.38629 1.38629 1.38629 1.38629
19499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19500 36 0.23862 2.84929 2.43386 2.70756 36 - -
19501 1.38629 1.38629 1.38629 1.38629
19502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19503 37 2.53331 3.02441 0.20344 2.88069 37 - -
19504 1.38629 1.38629 1.38629 1.38629
19505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19506 38 2.53331 3.02441 0.20344 2.88069 38 - -
19507 1.38629 1.38629 1.38629 1.38629
19508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19509 39 2.53331 3.02441 0.20344 2.88069 39 - -
19510 1.38629 1.38629 1.38629 1.38629
19511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19512 40 2.57915 2.25909 2.64442 0.28946 40 - -
19513 1.38629 1.38629 1.38629 1.38629
19514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19515 41 2.81865 0.23582 2.88868 2.35662 41 - -
19516 1.38629 1.38629 1.38629 1.38629
19517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19518 42 2.53331 3.02441 0.20344 2.88069 42 - -
19519 1.38629 1.38629 1.38629 1.38629
19520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19521 43 2.57915 2.25909 2.64442 0.28946 43 - -
19522 1.38629 1.38629 1.38629 1.38629
19523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19524 44 2.57915 2.25909 2.64442 0.28946 44 - -
19525 1.38629 1.38629 1.38629 1.38629
19526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19527 45 0.23862 2.84929 2.43386 2.70756 45 - -
19528 1.38629 1.38629 1.38629 1.38629
19529 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
19530 //
19531 HMMER3/b [3.0 | March 2010]
19532 NAME 3_End_Metazoa_58S_end_twentyfivea_long
19533 LENG 45
19534 ALPH DNA
19535 RF no
19536 CS no
19537 MAP yes
19538 DATE Sat Feb 25 14:42:02 2012
19539 NSEQ 2
19540 EFFN 2.000000
19541 CKSUM 1347837329
19542 STATS LOCAL MSV -7.4541 0.72721
19543 STATS LOCAL VITERBI -8.2939 0.72721
19544 STATS LOCAL FORWARD -3.3636 0.72721
19545 HMM A C G T
19546 m->m m->i m->d i->m i->i d->m d->d
19547 COMPO 1.92452 1.19705 1.08122 1.54745
19548 1.38629 1.38629 1.38629 1.38629
19549 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
19550 1 2.57915 2.25909 2.64442 0.28946 1 - -
19551 1.38629 1.38629 1.38629 1.38629
19552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19553 2 2.81865 0.23582 2.88868 2.35662 2 - -
19554 1.38629 1.38629 1.38629 1.38629
19555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19556 3 2.53331 3.02441 0.20344 2.88069 3 - -
19557 1.38629 1.38629 1.38629 1.38629
19558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19559 4 2.53331 3.02441 0.20344 2.88069 4 - -
19560 1.38629 1.38629 1.38629 1.38629
19561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19562 5 2.57915 2.25909 2.64442 0.28946 5 - -
19563 1.38629 1.38629 1.38629 1.38629
19564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19565 6 2.53331 3.02441 0.20344 2.88069 6 - -
19566 1.38629 1.38629 1.38629 1.38629
19567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19568 7 0.23862 2.84929 2.43386 2.70756 7 - -
19569 1.38629 1.38629 1.38629 1.38629
19570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19571 8 2.81865 0.23582 2.88868 2.35662 8 - -
19572 1.38629 1.38629 1.38629 1.38629
19573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19574 9 2.81865 0.23582 2.88868 2.35662 9 - -
19575 1.38629 1.38629 1.38629 1.38629
19576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19577 10 2.81865 0.23582 2.88868 2.35662 10 - -
19578 1.38629 1.38629 1.38629 1.38629
19579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19580 11 2.53331 3.02441 0.20344 2.88069 11 - -
19581 1.38629 1.38629 1.38629 1.38629
19582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19583 12 2.81865 0.23582 2.88868 2.35662 12 - -
19584 1.38629 1.38629 1.38629 1.38629
19585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19586 13 2.53331 3.02441 0.20344 2.88069 13 - -
19587 1.38629 1.38629 1.38629 1.38629
19588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19589 14 2.53331 3.02441 0.20344 2.88069 14 - -
19590 1.38629 1.38629 1.38629 1.38629
19591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19592 15 2.53331 3.02441 0.20344 2.88069 15 - -
19593 1.38629 1.38629 1.38629 1.38629
19594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19595 16 2.57915 2.25909 2.64442 0.28946 16 - -
19596 1.38629 1.38629 1.38629 1.38629
19597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19598 17 2.81865 0.23582 2.88868 2.35662 17 - -
19599 1.38629 1.38629 1.38629 1.38629
19600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19601 18 2.81865 0.23582 2.88868 2.35662 18 - -
19602 1.38629 1.38629 1.38629 1.38629
19603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19604 19 2.81865 0.23582 2.88868 2.35662 19 - -
19605 1.38629 1.38629 1.38629 1.38629
19606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19607 20 2.53331 3.02441 0.20344 2.88069 20 - -
19608 1.38629 1.38629 1.38629 1.38629
19609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19610 21 2.53331 3.02441 0.20344 2.88069 21 - -
19611 1.38629 1.38629 1.38629 1.38629
19612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19613 22 2.53331 3.02441 0.20344 2.88069 22 - -
19614 1.38629 1.38629 1.38629 1.38629
19615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19616 23 2.81865 0.23582 2.88868 2.35662 23 - -
19617 1.38629 1.38629 1.38629 1.38629
19618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19619 24 2.81865 0.23582 2.88868 2.35662 24 - -
19620 1.38629 1.38629 1.38629 1.38629
19621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19622 25 0.23862 2.84929 2.43386 2.70756 25 - -
19623 1.38629 1.38629 1.38629 1.38629
19624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19625 26 2.81865 0.23582 2.88868 2.35662 26 - -
19626 1.38629 1.38629 1.38629 1.38629
19627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19628 27 2.53331 3.02441 0.20344 2.88069 27 - -
19629 1.38629 1.38629 1.38629 1.38629
19630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19631 28 2.81865 0.23582 2.88868 2.35662 28 - -
19632 1.38629 1.38629 1.38629 1.38629
19633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19634 29 2.81865 0.23582 2.88868 2.35662 29 - -
19635 1.38629 1.38629 1.38629 1.38629
19636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19637 30 2.57915 2.25909 2.64442 0.28946 30 - -
19638 1.38629 1.38629 1.38629 1.38629
19639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19640 31 2.53331 3.02441 0.20344 2.88069 31 - -
19641 1.38629 1.38629 1.38629 1.38629
19642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19643 32 2.57915 2.25909 2.64442 0.28946 32 - -
19644 1.38629 1.38629 1.38629 1.38629
19645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19646 33 2.81865 0.23582 2.88868 2.35662 33 - -
19647 1.38629 1.38629 1.38629 1.38629
19648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19649 34 2.57915 2.25909 2.64442 0.28946 34 - -
19650 1.38629 1.38629 1.38629 1.38629
19651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19652 35 2.53331 3.02441 0.20344 2.88069 35 - -
19653 1.38629 1.38629 1.38629 1.38629
19654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19655 36 0.23862 2.84929 2.43386 2.70756 36 - -
19656 1.38629 1.38629 1.38629 1.38629
19657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19658 37 2.53331 3.02441 0.20344 2.88069 37 - -
19659 1.38629 1.38629 1.38629 1.38629
19660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19661 38 2.53331 3.02441 0.20344 2.88069 38 - -
19662 1.38629 1.38629 1.38629 1.38629
19663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19664 39 2.53331 3.02441 0.20344 2.88069 39 - -
19665 1.38629 1.38629 1.38629 1.38629
19666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19667 40 2.57915 2.25909 2.64442 0.28946 40 - -
19668 1.38629 1.38629 1.38629 1.38629
19669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19670 41 2.81865 0.23582 2.88868 2.35662 41 - -
19671 1.38629 1.38629 1.38629 1.38629
19672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19673 42 2.53331 3.02441 0.20344 2.88069 42 - -
19674 1.38629 1.38629 1.38629 1.38629
19675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19676 43 2.57915 2.25909 2.64442 0.28946 43 - -
19677 1.38629 1.38629 1.38629 1.38629
19678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19679 44 0.23862 2.84929 2.43386 2.70756 44 - -
19680 1.38629 1.38629 1.38629 1.38629
19681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19682 45 2.57915 2.25909 2.64442 0.28946 45 - -
19683 1.38629 1.38629 1.38629 1.38629
19684 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
19685 //
19686 HMMER3/b [3.0 | March 2010]
19687 NAME 3_End_Metazoa_58S_end_twentyfiveb_long
19688 LENG 45
19689 ALPH DNA
19690 RF no
19691 CS no
19692 MAP yes
19693 DATE Sat Feb 25 14:42:10 2012
19694 NSEQ 12
19695 EFFN 3.647461
19696 CKSUM 1179886168
19697 STATS LOCAL MSV -7.3738 0.71933
19698 STATS LOCAL VITERBI -7.8429 0.71933
19699 STATS LOCAL FORWARD -4.1131 0.71933
19700 HMM A C G T
19701 m->m m->i m->d i->m i->i d->m d->d
19702 COMPO 1.81069 1.27123 1.12801 1.45975
19703 1.38629 1.38629 1.38629 1.38629
19704 0.03480 4.06859 4.06859 1.46634 0.26236 0.00000 *
19705 1 3.54628 0.11749 3.59080 2.91069 1 - -
19706 1.38629 1.38629 1.38629 1.38629
19707 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19708 2 3.18923 2.65900 3.23350 0.16327 2 - -
19709 1.38629 1.38629 1.38629 1.38629
19710 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19711 3 2.47123 0.80024 2.54304 0.94759 3 - -
19712 1.38629 1.38629 1.38629 1.38629
19713 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19714 4 3.01510 3.68679 0.10688 3.60196 4 - -
19715 1.38629 1.38629 1.38629 1.38629
19716 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19717 5 2.78751 1.78994 2.84762 0.33761 5 - -
19718 1.38629 1.38629 1.38629 1.38629
19719 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19720 6 3.01510 3.68679 0.10688 3.60196 6 - -
19721 1.38629 1.38629 1.38629 1.38629
19722 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19723 7 0.12954 3.47883 2.86559 3.38998 7 - -
19724 1.38629 1.38629 1.38629 1.38629
19725 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19726 8 3.54628 0.11749 3.59080 2.91069 8 - -
19727 1.38629 1.38629 1.38629 1.38629
19728 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19729 9 3.54628 0.11749 3.59080 2.91069 9 - -
19730 1.38629 1.38629 1.38629 1.38629
19731 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19732 10 0.68274 2.28073 2.23327 1.25393 10 - -
19733 1.38629 1.38629 1.38629 1.38629
19734 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19735 11 0.12954 3.47883 2.86559 3.38998 11 - -
19736 1.38629 1.38629 1.38629 1.38629
19737 0.16186 4.06859 2.02240 1.46634 0.26236 1.09861 0.40547
19738 12 0.48278 2.39656 2.26531 1.67075 12 - -
19739 1.38629 1.38629 1.38629 1.38629
19740 0.03942 3.94616 3.94616 1.46634 0.26236 0.22988 1.58293
19741 13 3.01510 3.68679 0.10688 3.60196 13 - -
19742 1.38629 1.38629 1.38629 1.38629
19743 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19744 14 0.12954 3.47883 2.86559 3.38998 14 - -
19745 1.38629 1.38629 1.38629 1.38629
19746 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19747 15 3.01510 3.68679 0.10688 3.60196 15 - -
19748 1.38629 1.38629 1.38629 1.38629
19749 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19750 16 2.95542 2.11884 3.00916 0.25046 16 - -
19751 1.38629 1.38629 1.38629 1.38629
19752 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19753 17 3.54628 0.11749 3.59080 2.91069 17 - -
19754 1.38629 1.38629 1.38629 1.38629
19755 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19756 18 3.54628 0.11749 3.59080 2.91069 18 - -
19757 1.38629 1.38629 1.38629 1.38629
19758 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19759 19 3.18923 2.65900 3.23350 0.16327 19 - -
19760 1.38629 1.38629 1.38629 1.38629
19761 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19762 20 3.01510 3.68679 0.10688 3.60196 20 - -
19763 1.38629 1.38629 1.38629 1.38629
19764 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19765 21 3.01510 3.68679 0.10688 3.60196 21 - -
19766 1.38629 1.38629 1.38629 1.38629
19767 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19768 22 3.01510 3.68679 0.10688 3.60196 22 - -
19769 1.38629 1.38629 1.38629 1.38629
19770 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19771 23 3.54628 0.11749 3.59080 2.91069 23 - -
19772 1.38629 1.38629 1.38629 1.38629
19773 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19774 24 3.54628 0.11749 3.59080 2.91069 24 - -
19775 1.38629 1.38629 1.38629 1.38629
19776 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19777 25 0.12954 3.47883 2.86559 3.38998 25 - -
19778 1.38629 1.38629 1.38629 1.38629
19779 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19780 26 3.54628 0.11749 3.59080 2.91069 26 - -
19781 1.38629 1.38629 1.38629 1.38629
19782 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19783 27 3.01510 3.68679 0.10688 3.60196 27 - -
19784 1.38629 1.38629 1.38629 1.38629
19785 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19786 28 3.54628 0.11749 3.59080 2.91069 28 - -
19787 1.38629 1.38629 1.38629 1.38629
19788 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19789 29 3.54628 0.11749 3.59080 2.91069 29 - -
19790 1.38629 1.38629 1.38629 1.38629
19791 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19792 30 3.18923 2.65900 3.23350 0.16327 30 - -
19793 1.38629 1.38629 1.38629 1.38629
19794 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19795 31 3.01510 3.68679 0.10688 3.60196 31 - -
19796 1.38629 1.38629 1.38629 1.38629
19797 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19798 32 3.18923 2.65900 3.23350 0.16327 32 - -
19799 1.38629 1.38629 1.38629 1.38629
19800 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19801 33 3.54628 0.11749 3.59080 2.91069 33 - -
19802 1.38629 1.38629 1.38629 1.38629
19803 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19804 34 3.18923 2.65900 3.23350 0.16327 34 - -
19805 1.38629 1.38629 1.38629 1.38629
19806 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19807 35 3.01510 3.68679 0.10688 3.60196 35 - -
19808 1.38629 1.38629 1.38629 1.38629
19809 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19810 36 0.12954 3.47883 2.86559 3.38998 36 - -
19811 1.38629 1.38629 1.38629 1.38629
19812 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19813 37 3.01510 3.68679 0.10688 3.60196 37 - -
19814 1.38629 1.38629 1.38629 1.38629
19815 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19816 38 3.01510 3.68679 0.10688 3.60196 38 - -
19817 1.38629 1.38629 1.38629 1.38629
19818 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19819 39 3.01510 3.68679 0.10688 3.60196 39 - -
19820 1.38629 1.38629 1.38629 1.38629
19821 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19822 40 3.18923 2.65900 3.23350 0.16327 40 - -
19823 1.38629 1.38629 1.38629 1.38629
19824 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19825 41 3.54628 0.11749 3.59080 2.91069 41 - -
19826 1.38629 1.38629 1.38629 1.38629
19827 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19828 42 3.01510 3.68679 0.10688 3.60196 42 - -
19829 1.38629 1.38629 1.38629 1.38629
19830 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19831 43 3.01510 3.68679 0.10688 3.60196 43 - -
19832 1.38629 1.38629 1.38629 1.38629
19833 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19834 44 3.18923 2.65900 3.23350 0.16327 44 - -
19835 1.38629 1.38629 1.38629 1.38629
19836 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
19837 45 3.18923 2.65900 3.23350 0.16327 45 - -
19838 1.38629 1.38629 1.38629 1.38629
19839 0.01755 4.05134 * 1.46634 0.26236 0.00000 *
19840 //
19841 HMMER3/b [3.0 | March 2010]
19842 NAME 3_End_Metazoa_58S_end_twentyfour_long
19843 LENG 45
19844 ALPH DNA
19845 RF no
19846 CS no
19847 MAP yes
19848 DATE Sat Feb 25 14:41:53 2012
19849 NSEQ 4
19850 EFFN 3.183594
19851 CKSUM 3050269107
19852 STATS LOCAL MSV -8.1539 0.71932
19853 STATS LOCAL VITERBI -7.6627 0.71932
19854 STATS LOCAL FORWARD -3.6691 0.71932
19855 HMM A C G T
19856 m->m m->i m->d i->m i->i d->m d->d
19857 COMPO 2.05456 1.20166 1.14804 1.37082
19858 1.38629 1.38629 1.38629 1.38629
19859 0.03786 3.98594 3.98594 1.46634 0.26236 0.00000 *
19860 1 3.38051 0.13666 3.43217 2.79055 1 - -
19861 1.38629 1.38629 1.38629 1.38629
19862 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19863 2 2.91546 3.54130 0.12237 3.44120 2 - -
19864 1.38629 1.38629 1.38629 1.38629
19865 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19866 3 2.91546 3.54130 0.12237 3.44120 3 - -
19867 1.38629 1.38629 1.38629 1.38629
19868 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19869 4 0.14807 3.33468 2.77222 3.23207 4 - -
19870 1.38629 1.38629 1.38629 1.38629
19871 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19872 5 3.38051 0.13666 3.43217 2.79055 5 - -
19873 1.38629 1.38629 1.38629 1.38629
19874 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19875 6 0.14807 3.33468 2.77222 3.23207 6 - -
19876 1.38629 1.38629 1.38629 1.38629
19877 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19878 7 3.04283 2.56598 3.09273 0.18624 7 - -
19879 1.38629 1.38629 1.38629 1.38629
19880 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19881 8 2.91546 3.54130 0.12237 3.44120 8 - -
19882 1.38629 1.38629 1.38629 1.38629
19883 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19884 9 2.91546 3.54130 0.12237 3.44120 9 - -
19885 1.38629 1.38629 1.38629 1.38629
19886 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19887 10 2.91546 3.54130 0.12237 3.44120 10 - -
19888 1.38629 1.38629 1.38629 1.38629
19889 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19890 11 3.38051 0.13666 3.43217 2.79055 11 - -
19891 1.38629 1.38629 1.38629 1.38629
19892 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19893 12 3.04283 2.56598 3.09273 0.18624 12 - -
19894 1.38629 1.38629 1.38629 1.38629
19895 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19896 13 3.04283 2.56598 3.09273 0.18624 13 - -
19897 1.38629 1.38629 1.38629 1.38629
19898 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19899 14 2.91546 3.54130 0.12237 3.44120 14 - -
19900 1.38629 1.38629 1.38629 1.38629
19901 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19902 15 3.04283 2.56598 3.09273 0.18624 15 - -
19903 1.38629 1.38629 1.38629 1.38629
19904 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19905 16 3.38051 0.13666 3.43217 2.79055 16 - -
19906 1.38629 1.38629 1.38629 1.38629
19907 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19908 17 3.38051 0.13666 3.43217 2.79055 17 - -
19909 1.38629 1.38629 1.38629 1.38629
19910 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19911 18 3.38051 0.13666 3.43217 2.79055 18 - -
19912 1.38629 1.38629 1.38629 1.38629
19913 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19914 19 3.38051 0.13666 3.43217 2.79055 19 - -
19915 1.38629 1.38629 1.38629 1.38629
19916 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19917 20 3.04283 2.56598 3.09273 0.18624 20 - -
19918 1.38629 1.38629 1.38629 1.38629
19919 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19920 21 2.91546 3.54130 0.12237 3.44120 21 - -
19921 1.38629 1.38629 1.38629 1.38629
19922 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19923 22 3.04283 2.56598 3.09273 0.18624 22 - -
19924 1.38629 1.38629 1.38629 1.38629
19925 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19926 23 3.38051 0.13666 3.43217 2.79055 23 - -
19927 1.38629 1.38629 1.38629 1.38629
19928 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19929 24 3.38051 0.13666 3.43217 2.79055 24 - -
19930 1.38629 1.38629 1.38629 1.38629
19931 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19932 25 0.14807 3.33468 2.77222 3.23207 25 - -
19933 1.38629 1.38629 1.38629 1.38629
19934 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19935 26 3.04283 2.56598 3.09273 0.18624 26 - -
19936 1.38629 1.38629 1.38629 1.38629
19937 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19938 27 2.91546 3.54130 0.12237 3.44120 27 - -
19939 1.38629 1.38629 1.38629 1.38629
19940 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19941 28 3.04283 2.56598 3.09273 0.18624 28 - -
19942 1.38629 1.38629 1.38629 1.38629
19943 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19944 29 3.38051 0.13666 3.43217 2.79055 29 - -
19945 1.38629 1.38629 1.38629 1.38629
19946 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19947 30 3.04283 2.56598 3.09273 0.18624 30 - -
19948 1.38629 1.38629 1.38629 1.38629
19949 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19950 31 2.91546 3.54130 0.12237 3.44120 31 - -
19951 1.38629 1.38629 1.38629 1.38629
19952 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19953 32 2.91546 3.54130 0.12237 3.44120 32 - -
19954 1.38629 1.38629 1.38629 1.38629
19955 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19956 33 3.38051 0.13666 3.43217 2.79055 33 - -
19957 1.38629 1.38629 1.38629 1.38629
19958 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19959 34 3.04283 2.56598 3.09273 0.18624 34 - -
19960 1.38629 1.38629 1.38629 1.38629
19961 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19962 35 3.38051 0.13666 3.43217 2.79055 35 - -
19963 1.38629 1.38629 1.38629 1.38629
19964 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19965 36 0.14807 3.33468 2.77222 3.23207 36 - -
19966 1.38629 1.38629 1.38629 1.38629
19967 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19968 37 2.91546 3.54130 0.12237 3.44120 37 - -
19969 1.38629 1.38629 1.38629 1.38629
19970 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19971 38 2.91546 3.54130 0.12237 3.44120 38 - -
19972 1.38629 1.38629 1.38629 1.38629
19973 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19974 39 2.91546 3.54130 0.12237 3.44120 39 - -
19975 1.38629 1.38629 1.38629 1.38629
19976 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19977 40 3.04283 2.56598 3.09273 0.18624 40 - -
19978 1.38629 1.38629 1.38629 1.38629
19979 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19980 41 3.38051 0.13666 3.43217 2.79055 41 - -
19981 1.38629 1.38629 1.38629 1.38629
19982 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19983 42 2.91546 3.54130 0.12237 3.44120 42 - -
19984 1.38629 1.38629 1.38629 1.38629
19985 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19986 43 2.91546 3.54130 0.12237 3.44120 43 - -
19987 1.38629 1.38629 1.38629 1.38629
19988 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19989 44 3.38051 0.13666 3.43217 2.79055 44 - -
19990 1.38629 1.38629 1.38629 1.38629
19991 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
19992 45 3.04283 2.56598 3.09273 0.18624 45 - -
19993 1.38629 1.38629 1.38629 1.38629
19994 0.01911 3.96719 * 1.46634 0.26236 0.00000 *
19995 //
19996 HMMER3/b [3.0 | March 2010]
19997 NAME 3_End_Metazoa_58S_end_twentynine_long
19998 LENG 45
19999 ALPH DNA
20000 RF no
20001 CS no
20002 MAP yes
20003 DATE Sat Feb 25 14:43:04 2012
20004 NSEQ 2
20005 EFFN 2.000000
20006 CKSUM 2752150723
20007 STATS LOCAL MSV -7.4583 0.72844
20008 STATS LOCAL VITERBI -8.2852 0.72844
20009 STATS LOCAL FORWARD -3.7436 0.72844
20010 HMM A C G T
20011 m->m m->i m->d i->m i->i d->m d->d
20012 COMPO 1.65923 1.44280 1.31893 1.18408
20013 1.38629 1.38629 1.38629 1.38629
20014 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
20015 1 2.53331 3.02441 0.20344 2.88069 1 - -
20016 1.38629 1.38629 1.38629 1.38629
20017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20018 2 2.81865 0.23582 2.88868 2.35662 2 - -
20019 1.38629 1.38629 1.38629 1.38629
20020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20021 3 0.23862 2.84929 2.43386 2.70756 3 - -
20022 1.38629 1.38629 1.38629 1.38629
20023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20024 4 2.53331 3.02441 0.20344 2.88069 4 - -
20025 1.38629 1.38629 1.38629 1.38629
20026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20027 5 2.81865 0.23582 2.88868 2.35662 5 - -
20028 1.38629 1.38629 1.38629 1.38629
20029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20030 6 2.81865 0.23582 2.88868 2.35662 6 - -
20031 1.38629 1.38629 1.38629 1.38629
20032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20033 7 0.23862 2.84929 2.43386 2.70756 7 - -
20034 1.38629 1.38629 1.38629 1.38629
20035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20036 8 2.57915 2.25909 2.64442 0.28946 8 - -
20037 1.38629 1.38629 1.38629 1.38629
20038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20039 9 2.57915 2.25909 2.64442 0.28946 9 - -
20040 1.38629 1.38629 1.38629 1.38629
20041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20042 10 2.53331 3.02441 0.20344 2.88069 10 - -
20043 1.38629 1.38629 1.38629 1.38629
20044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20045 11 2.53331 3.02441 0.20344 2.88069 11 - -
20046 1.38629 1.38629 1.38629 1.38629
20047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20048 12 0.23862 2.84929 2.43386 2.70756 12 - -
20049 1.38629 1.38629 1.38629 1.38629
20050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20051 13 2.57915 2.25909 2.64442 0.28946 13 - -
20052 1.38629 1.38629 1.38629 1.38629
20053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20054 14 0.23862 2.84929 2.43386 2.70756 14 - -
20055 1.38629 1.38629 1.38629 1.38629
20056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20057 15 2.57915 2.25909 2.64442 0.28946 15 - -
20058 1.38629 1.38629 1.38629 1.38629
20059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20060 16 2.81865 0.23582 2.88868 2.35662 16 - -
20061 1.38629 1.38629 1.38629 1.38629
20062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20063 17 2.81865 0.23582 2.88868 2.35662 17 - -
20064 1.38629 1.38629 1.38629 1.38629
20065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20066 18 0.23862 2.84929 2.43386 2.70756 18 - -
20067 1.38629 1.38629 1.38629 1.38629
20068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20069 19 0.23862 2.84929 2.43386 2.70756 19 - -
20070 1.38629 1.38629 1.38629 1.38629
20071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20072 20 2.57915 2.25909 2.64442 0.28946 20 - -
20073 1.38629 1.38629 1.38629 1.38629
20074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20075 21 2.53331 3.02441 0.20344 2.88069 21 - -
20076 1.38629 1.38629 1.38629 1.38629
20077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20078 22 2.53331 3.02441 0.20344 2.88069 22 - -
20079 1.38629 1.38629 1.38629 1.38629
20080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20081 23 2.81865 0.23582 2.88868 2.35662 23 - -
20082 1.38629 1.38629 1.38629 1.38629
20083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20084 24 2.57915 2.25909 2.64442 0.28946 24 - -
20085 1.38629 1.38629 1.38629 1.38629
20086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20087 25 2.57915 2.25909 2.64442 0.28946 25 - -
20088 1.38629 1.38629 1.38629 1.38629
20089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20090 26 2.81865 0.23582 2.88868 2.35662 26 - -
20091 1.38629 1.38629 1.38629 1.38629
20092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20093 27 2.53331 3.02441 0.20344 2.88069 27 - -
20094 1.38629 1.38629 1.38629 1.38629
20095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20096 28 2.57915 2.25909 2.64442 0.28946 28 - -
20097 1.38629 1.38629 1.38629 1.38629
20098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20099 29 2.57915 2.25909 2.64442 0.28946 29 - -
20100 1.38629 1.38629 1.38629 1.38629
20101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20102 30 2.57915 2.25909 2.64442 0.28946 30 - -
20103 1.38629 1.38629 1.38629 1.38629
20104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20105 31 2.53331 3.02441 0.20344 2.88069 31 - -
20106 1.38629 1.38629 1.38629 1.38629
20107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20108 32 2.57915 2.25909 2.64442 0.28946 32 - -
20109 1.38629 1.38629 1.38629 1.38629
20110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20111 33 2.81865 0.23582 2.88868 2.35662 33 - -
20112 1.38629 1.38629 1.38629 1.38629
20113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20114 34 2.57915 2.25909 2.64442 0.28946 34 - -
20115 1.38629 1.38629 1.38629 1.38629
20116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20117 35 2.53331 3.02441 0.20344 2.88069 35 - -
20118 1.38629 1.38629 1.38629 1.38629
20119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20120 36 0.23862 2.84929 2.43386 2.70756 36 - -
20121 1.38629 1.38629 1.38629 1.38629
20122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20123 37 2.53331 3.02441 0.20344 2.88069 37 - -
20124 1.38629 1.38629 1.38629 1.38629
20125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20126 38 2.81865 0.23582 2.88868 2.35662 38 - -
20127 1.38629 1.38629 1.38629 1.38629
20128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20129 39 2.53331 3.02441 0.20344 2.88069 39 - -
20130 1.38629 1.38629 1.38629 1.38629
20131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20132 40 2.57915 2.25909 2.64442 0.28946 40 - -
20133 1.38629 1.38629 1.38629 1.38629
20134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20135 41 2.81865 0.23582 2.88868 2.35662 41 - -
20136 1.38629 1.38629 1.38629 1.38629
20137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20138 42 2.53331 3.02441 0.20344 2.88069 42 - -
20139 1.38629 1.38629 1.38629 1.38629
20140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20141 43 2.57915 2.25909 2.64442 0.28946 43 - -
20142 1.38629 1.38629 1.38629 1.38629
20143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20144 44 2.57915 2.25909 2.64442 0.28946 44 - -
20145 1.38629 1.38629 1.38629 1.38629
20146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
20147 45 2.57915 2.25909 2.64442 0.28946 45 - -
20148 1.38629 1.38629 1.38629 1.38629
20149 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
20150 //
20151 HMMER3/b [3.0 | March 2010]
20152 NAME 3_End_Metazoa_58S_end_twentyseven_long
20153 LENG 45
20154 ALPH DNA
20155 RF no
20156 CS no
20157 MAP yes
20158 DATE Sat Feb 25 14:42:46 2012
20159 NSEQ 3
20160 EFFN 3.000000
20161 CKSUM 42895608
20162 STATS LOCAL MSV -7.7972 0.72095
20163 STATS LOCAL VITERBI -7.8414 0.72095
20164 STATS LOCAL FORWARD -3.6469 0.72095
20165 HMM A C G T
20166 m->m m->i m->d i->m i->i d->m d->d
20167 COMPO 1.57109 1.55471 1.08177 1.41908
20168 1.38629 1.38629 1.38629 1.38629
20169 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
20170 1 2.86982 3.47591 0.13017 3.36931 1 - -
20171 1.38629 1.38629 1.38629 1.38629
20172 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20173 2 2.97980 2.52563 3.03204 0.19727 2 - -
20174 1.38629 1.38629 1.38629 1.38629
20175 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20176 3 2.86982 3.47591 0.13017 3.36931 3 - -
20177 1.38629 1.38629 1.38629 1.38629
20178 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20179 4 2.86982 3.47591 0.13017 3.36931 4 - -
20180 1.38629 1.38629 1.38629 1.38629
20181 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20182 5 3.30705 0.14631 3.36166 2.73626 5 - -
20183 1.38629 1.38629 1.38629 1.38629
20184 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20185 6 0.15719 3.27118 2.73043 3.16274 6 - -
20186 1.38629 1.38629 1.38629 1.38629
20187 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20188 7 0.15719 3.27118 2.73043 3.16274 7 - -
20189 1.38629 1.38629 1.38629 1.38629
20190 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20191 8 0.15719 3.27118 2.73043 3.16274 8 - -
20192 1.38629 1.38629 1.38629 1.38629
20193 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20194 9 2.86982 3.47591 0.13017 3.36931 9 - -
20195 1.38629 1.38629 1.38629 1.38629
20196 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20197 10 0.15719 3.27118 2.73043 3.16274 10 - -
20198 1.38629 1.38629 1.38629 1.38629
20199 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20200 11 3.30705 0.14631 3.36166 2.73626 11 - -
20201 1.38629 1.38629 1.38629 1.38629
20202 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20203 12 2.97980 2.52563 3.03204 0.19727 12 - -
20204 1.38629 1.38629 1.38629 1.38629
20205 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20206 13 2.86982 3.47591 0.13017 3.36931 13 - -
20207 1.38629 1.38629 1.38629 1.38629
20208 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20209 14 0.66361 1.42357 2.15007 2.05820 14 - -
20210 1.38629 1.38629 1.38629 1.38629
20211 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20212 15 2.97980 2.52563 3.03204 0.19727 15 - -
20213 1.38629 1.38629 1.38629 1.38629
20214 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20215 16 2.86982 3.47591 0.13017 3.36931 16 - -
20216 1.38629 1.38629 1.38629 1.38629
20217 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20218 17 2.97980 2.52563 3.03204 0.19727 17 - -
20219 1.38629 1.38629 1.38629 1.38629
20220 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20221 18 3.30705 0.14631 3.36166 2.73626 18 - -
20222 1.38629 1.38629 1.38629 1.38629
20223 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20224 19 2.86982 3.47591 0.13017 3.36931 19 - -
20225 1.38629 1.38629 1.38629 1.38629
20226 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20227 20 0.15719 3.27118 2.73043 3.16274 20 - -
20228 1.38629 1.38629 1.38629 1.38629
20229 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20230 21 2.97980 2.52563 3.03204 0.19727 21 - -
20231 1.38629 1.38629 1.38629 1.38629
20232 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20233 22 2.86982 3.47591 0.13017 3.36931 22 - -
20234 1.38629 1.38629 1.38629 1.38629
20235 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20236 23 3.30705 0.14631 3.36166 2.73626 23 - -
20237 1.38629 1.38629 1.38629 1.38629
20238 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20239 24 2.43440 0.61908 2.50724 1.22957 24 - -
20240 1.38629 1.38629 1.38629 1.38629
20241 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20242 25 0.15719 3.27118 2.73043 3.16274 25 - -
20243 1.38629 1.38629 1.38629 1.38629
20244 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20245 26 3.30705 0.14631 3.36166 2.73626 26 - -
20246 1.38629 1.38629 1.38629 1.38629
20247 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20248 27 2.86982 3.47591 0.13017 3.36931 27 - -
20249 1.38629 1.38629 1.38629 1.38629
20250 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20251 28 2.86982 3.47591 0.13017 3.36931 28 - -
20252 1.38629 1.38629 1.38629 1.38629
20253 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20254 29 3.30705 0.14631 3.36166 2.73626 29 - -
20255 1.38629 1.38629 1.38629 1.38629
20256 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20257 30 3.30705 0.14631 3.36166 2.73626 30 - -
20258 1.38629 1.38629 1.38629 1.38629
20259 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20260 31 2.86982 3.47591 0.13017 3.36931 31 - -
20261 1.38629 1.38629 1.38629 1.38629
20262 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20263 32 2.97980 2.52563 3.03204 0.19727 32 - -
20264 1.38629 1.38629 1.38629 1.38629
20265 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20266 33 2.97980 2.52563 3.03204 0.19727 33 - -
20267 1.38629 1.38629 1.38629 1.38629
20268 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20269 34 2.97980 2.52563 3.03204 0.19727 34 - -
20270 1.38629 1.38629 1.38629 1.38629
20271 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20272 35 2.86982 3.47591 0.13017 3.36931 35 - -
20273 1.38629 1.38629 1.38629 1.38629
20274 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20275 36 0.15719 3.27118 2.73043 3.16274 36 - -
20276 1.38629 1.38629 1.38629 1.38629
20277 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20278 37 2.86982 3.47591 0.13017 3.36931 37 - -
20279 1.38629 1.38629 1.38629 1.38629
20280 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20281 38 2.86982 3.47591 0.13017 3.36931 38 - -
20282 1.38629 1.38629 1.38629 1.38629
20283 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20284 39 2.86982 3.47591 0.13017 3.36931 39 - -
20285 1.38629 1.38629 1.38629 1.38629
20286 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20287 40 2.97980 2.52563 3.03204 0.19727 40 - -
20288 1.38629 1.38629 1.38629 1.38629
20289 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20290 41 3.30705 0.14631 3.36166 2.73626 41 - -
20291 1.38629 1.38629 1.38629 1.38629
20292 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20293 42 0.15719 3.27118 2.73043 3.16274 42 - -
20294 1.38629 1.38629 1.38629 1.38629
20295 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20296 43 2.86982 3.47591 0.13017 3.36931 43 - -
20297 1.38629 1.38629 1.38629 1.38629
20298 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20299 44 2.97980 2.52563 3.03204 0.19727 44 - -
20300 1.38629 1.38629 1.38629 1.38629
20301 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20302 45 2.97980 2.52563 3.03204 0.19727 45 - -
20303 1.38629 1.38629 1.38629 1.38629
20304 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
20305 //
20306 HMMER3/b [3.0 | March 2010]
20307 NAME 3_End_Metazoa_58S_end_twentysixa_long
20308 LENG 45
20309 ALPH DNA
20310 RF no
20311 CS no
20312 MAP yes
20313 DATE Sat Feb 25 14:42:20 2012
20314 NSEQ 27
20315 EFFN 3.312378
20316 CKSUM 1001928202
20317 STATS LOCAL MSV -8.0269 0.71933
20318 STATS LOCAL VITERBI -7.7446 0.71933
20319 STATS LOCAL FORWARD -3.9740 0.71933
20320 HMM A C G T
20321 m->m m->i m->d i->m i->i d->m d->d
20322 COMPO 1.21823 1.45369 1.60573 1.31008
20323 1.38629 1.38629 1.38629 1.38629
20324 0.03696 4.00958 4.00958 1.46634 0.26236 0.00000 *
20325 1 2.94522 3.58440 0.11753 3.48872 1 - -
20326 1.38629 1.38629 1.38629 1.38629
20327 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20328 2 3.42930 0.13066 3.47892 2.82623 2 - -
20329 1.38629 1.38629 1.38629 1.38629
20330 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20331 3 0.14233 3.37696 2.79978 3.27831 3 - -
20332 1.38629 1.38629 1.38629 1.38629
20333 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20334 4 3.42930 0.13066 3.47892 2.82623 4 - -
20335 1.38629 1.38629 1.38629 1.38629
20336 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20337 5 0.14233 3.37696 2.79978 3.27831 5 - -
20338 1.38629 1.38629 1.38629 1.38629
20339 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20340 6 3.08528 2.59302 3.13356 0.17921 6 - -
20341 1.38629 1.38629 1.38629 1.38629
20342 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20343 7 3.42930 0.13066 3.47892 2.82623 7 - -
20344 1.38629 1.38629 1.38629 1.38629
20345 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20346 8 2.94522 3.58440 0.11753 3.48872 8 - -
20347 1.38629 1.38629 1.38629 1.38629
20348 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20349 9 3.08528 2.59302 3.13356 0.17921 9 - -
20350 1.38629 1.38629 1.38629 1.38629
20351 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20352 10 0.14233 3.37696 2.79978 3.27831 10 - -
20353 1.38629 1.38629 1.38629 1.38629
20354 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20355 11 3.42930 0.13066 3.47892 2.82623 11 - -
20356 1.38629 1.38629 1.38629 1.38629
20357 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20358 12 0.14233 3.37696 2.79978 3.27831 12 - -
20359 1.38629 1.38629 1.38629 1.38629
20360 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20361 13 0.14233 3.37696 2.79978 3.27831 13 - -
20362 1.38629 1.38629 1.38629 1.38629
20363 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20364 14 3.42930 0.13066 3.47892 2.82623 14 - -
20365 1.38629 1.38629 1.38629 1.38629
20366 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20367 15 0.14233 3.37696 2.79978 3.27831 15 - -
20368 1.38629 1.38629 1.38629 1.38629
20369 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20370 16 2.94522 3.58440 0.11753 3.48872 16 - -
20371 1.38629 1.38629 1.38629 1.38629
20372 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20373 17 3.08528 2.59302 3.13356 0.17921 17 - -
20374 1.38629 1.38629 1.38629 1.38629
20375 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20376 18 0.14233 3.37696 2.79978 3.27831 18 - -
20377 1.38629 1.38629 1.38629 1.38629
20378 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20379 19 3.42930 0.13066 3.47892 2.82623 19 - -
20380 1.38629 1.38629 1.38629 1.38629
20381 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20382 20 2.94522 3.58440 0.11753 3.48872 20 - -
20383 1.38629 1.38629 1.38629 1.38629
20384 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20385 21 0.14233 3.37696 2.79978 3.27831 21 - -
20386 1.38629 1.38629 1.38629 1.38629
20387 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20388 22 3.08528 2.59302 3.13356 0.17921 22 - -
20389 1.38629 1.38629 1.38629 1.38629
20390 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20391 23 2.94522 3.58440 0.11753 3.48872 23 - -
20392 1.38629 1.38629 1.38629 1.38629
20393 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20394 24 3.08528 2.59302 3.13356 0.17921 24 - -
20395 1.38629 1.38629 1.38629 1.38629
20396 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20397 25 0.14233 3.37696 2.79978 3.27831 25 - -
20398 1.38629 1.38629 1.38629 1.38629
20399 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20400 26 3.42930 0.13066 3.47892 2.82623 26 - -
20401 1.38629 1.38629 1.38629 1.38629
20402 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20403 27 0.14233 3.37696 2.79978 3.27831 27 - -
20404 1.38629 1.38629 1.38629 1.38629
20405 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20406 28 3.42930 0.13066 3.47892 2.82623 28 - -
20407 1.38629 1.38629 1.38629 1.38629
20408 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20409 29 0.14233 3.37696 2.79978 3.27831 29 - -
20410 1.38629 1.38629 1.38629 1.38629
20411 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20412 30 3.08528 2.59302 3.13356 0.17921 30 - -
20413 1.38629 1.38629 1.38629 1.38629
20414 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20415 31 3.08528 2.59302 3.13356 0.17921 31 - -
20416 1.38629 1.38629 1.38629 1.38629
20417 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20418 32 3.08528 2.59302 3.13356 0.17921 32 - -
20419 1.38629 1.38629 1.38629 1.38629
20420 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20421 33 3.08528 2.59302 3.13356 0.17921 33 - -
20422 1.38629 1.38629 1.38629 1.38629
20423 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20424 34 3.08528 2.59302 3.13356 0.17921 34 - -
20425 1.38629 1.38629 1.38629 1.38629
20426 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20427 35 2.94522 3.58440 0.11753 3.48872 35 - -
20428 1.38629 1.38629 1.38629 1.38629
20429 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20430 36 0.14233 3.37696 2.79978 3.27831 36 - -
20431 1.38629 1.38629 1.38629 1.38629
20432 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20433 37 2.94522 3.58440 0.11753 3.48872 37 - -
20434 1.38629 1.38629 1.38629 1.38629
20435 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20436 38 3.08528 2.59302 3.13356 0.17921 38 - -
20437 1.38629 1.38629 1.38629 1.38629
20438 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20439 39 2.94522 3.58440 0.11753 3.48872 39 - -
20440 1.38629 1.38629 1.38629 1.38629
20441 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20442 40 3.42930 0.13066 3.47892 2.82623 40 - -
20443 1.38629 1.38629 1.38629 1.38629
20444 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20445 41 3.42930 0.13066 3.47892 2.82623 41 - -
20446 1.38629 1.38629 1.38629 1.38629
20447 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20448 42 3.08528 2.59302 3.13356 0.17921 42 - -
20449 1.38629 1.38629 1.38629 1.38629
20450 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20451 43 0.14233 3.37696 2.79978 3.27831 43 - -
20452 1.38629 1.38629 1.38629 1.38629
20453 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20454 44 3.08528 2.59302 3.13356 0.17921 44 - -
20455 1.38629 1.38629 1.38629 1.38629
20456 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547
20457 45 0.14233 3.37696 2.79978 3.27831 45 - -
20458 1.38629 1.38629 1.38629 1.38629
20459 0.01865 3.99127 * 1.46634 0.26236 0.00000 *
20460 //
20461 HMMER3/b [3.0 | March 2010]
20462 NAME 3_End_Metazoa_58S_end_twentysixb_long
20463 LENG 45
20464 ALPH DNA
20465 RF no
20466 CS no
20467 MAP yes
20468 DATE Sat Feb 25 14:42:27 2012
20469 NSEQ 6
20470 EFFN 3.336914
20471 CKSUM 1511690450
20472 STATS LOCAL MSV -8.0062 0.71933
20473 STATS LOCAL VITERBI -7.8597 0.71933
20474 STATS LOCAL FORWARD -4.1594 0.71933
20475 HMM A C G T
20476 m->m m->i m->d i->m i->i d->m d->d
20477 COMPO 1.27761 1.37703 1.70358 1.24848
20478 1.38629 1.38629 1.38629 1.38629
20479 0.03679 4.01402 4.01402 1.46634 0.26236 0.00000 *
20480 1 3.43835 0.12958 3.48758 2.83281 1 - -
20481 1.38629 1.38629 1.38629 1.38629
20482 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20483 2 0.14130 3.38481 2.80488 3.28690 2 - -
20484 1.38629 1.38629 1.38629 1.38629
20485 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20486 3 3.43835 0.12958 3.48758 2.83281 3 - -
20487 1.38629 1.38629 1.38629 1.38629
20488 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20489 4 0.14130 3.38481 2.80488 3.28690 4 - -
20490 1.38629 1.38629 1.38629 1.38629
20491 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20492 5 3.09320 2.59806 3.14118 0.17794 5 - -
20493 1.38629 1.38629 1.38629 1.38629
20494 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20495 6 3.43835 0.12958 3.48758 2.83281 6 - -
20496 1.38629 1.38629 1.38629 1.38629
20497 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20498 7 2.95070 3.59237 0.11666 3.49752 7 - -
20499 1.38629 1.38629 1.38629 1.38629
20500 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20501 8 3.09320 2.59806 3.14118 0.17794 8 - -
20502 1.38629 1.38629 1.38629 1.38629
20503 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20504 9 0.14130 3.38481 2.80488 3.28690 9 - -
20505 1.38629 1.38629 1.38629 1.38629
20506 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20507 10 3.43835 0.12958 3.48758 2.83281 10 - -
20508 1.38629 1.38629 1.38629 1.38629
20509 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20510 11 3.09320 2.59806 3.14118 0.17794 11 - -
20511 1.38629 1.38629 1.38629 1.38629
20512 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20513 12 0.14130 3.38481 2.80488 3.28690 12 - -
20514 1.38629 1.38629 1.38629 1.38629
20515 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20516 13 3.43835 0.12958 3.48758 2.83281 13 - -
20517 1.38629 1.38629 1.38629 1.38629
20518 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20519 14 3.43835 0.12958 3.48758 2.83281 14 - -
20520 1.38629 1.38629 1.38629 1.38629
20521 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20522 15 0.14130 3.38481 2.80488 3.28690 15 - -
20523 1.38629 1.38629 1.38629 1.38629
20524 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20525 16 2.95070 3.59237 0.11666 3.49752 16 - -
20526 1.38629 1.38629 1.38629 1.38629
20527 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20528 17 3.09320 2.59806 3.14118 0.17794 17 - -
20529 1.38629 1.38629 1.38629 1.38629
20530 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20531 18 0.14130 3.38481 2.80488 3.28690 18 - -
20532 1.38629 1.38629 1.38629 1.38629
20533 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20534 19 3.43835 0.12958 3.48758 2.83281 19 - -
20535 1.38629 1.38629 1.38629 1.38629
20536 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20537 20 2.95070 3.59237 0.11666 3.49752 20 - -
20538 1.38629 1.38629 1.38629 1.38629
20539 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20540 21 0.14130 3.38481 2.80488 3.28690 21 - -
20541 1.38629 1.38629 1.38629 1.38629
20542 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20543 22 3.09320 2.59806 3.14118 0.17794 22 - -
20544 1.38629 1.38629 1.38629 1.38629
20545 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20546 23 2.95070 3.59237 0.11666 3.49752 23 - -
20547 1.38629 1.38629 1.38629 1.38629
20548 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20549 24 3.09320 2.59806 3.14118 0.17794 24 - -
20550 1.38629 1.38629 1.38629 1.38629
20551 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20552 25 0.14130 3.38481 2.80488 3.28690 25 - -
20553 1.38629 1.38629 1.38629 1.38629
20554 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20555 26 3.43835 0.12958 3.48758 2.83281 26 - -
20556 1.38629 1.38629 1.38629 1.38629
20557 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20558 27 0.14130 3.38481 2.80488 3.28690 27 - -
20559 1.38629 1.38629 1.38629 1.38629
20560 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20561 28 3.43835 0.12958 3.48758 2.83281 28 - -
20562 1.38629 1.38629 1.38629 1.38629
20563 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20564 29 0.14130 3.38481 2.80488 3.28690 29 - -
20565 1.38629 1.38629 1.38629 1.38629
20566 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20567 30 3.09320 2.59806 3.14118 0.17794 30 - -
20568 1.38629 1.38629 1.38629 1.38629
20569 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20570 31 3.09320 2.59806 3.14118 0.17794 31 - -
20571 1.38629 1.38629 1.38629 1.38629
20572 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20573 32 3.09320 2.59806 3.14118 0.17794 32 - -
20574 1.38629 1.38629 1.38629 1.38629
20575 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20576 33 3.09320 2.59806 3.14118 0.17794 33 - -
20577 1.38629 1.38629 1.38629 1.38629
20578 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20579 34 3.09320 2.59806 3.14118 0.17794 34 - -
20580 1.38629 1.38629 1.38629 1.38629
20581 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20582 35 2.95070 3.59237 0.11666 3.49752 35 - -
20583 1.38629 1.38629 1.38629 1.38629
20584 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20585 36 0.14130 3.38481 2.80488 3.28690 36 - -
20586 1.38629 1.38629 1.38629 1.38629
20587 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20588 37 2.95070 3.59237 0.11666 3.49752 37 - -
20589 1.38629 1.38629 1.38629 1.38629
20590 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20591 38 3.09320 2.59806 3.14118 0.17794 38 - -
20592 1.38629 1.38629 1.38629 1.38629
20593 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20594 39 2.95070 3.59237 0.11666 3.49752 39 - -
20595 1.38629 1.38629 1.38629 1.38629
20596 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20597 40 3.43835 0.12958 3.48758 2.83281 40 - -
20598 1.38629 1.38629 1.38629 1.38629
20599 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20600 41 3.43835 0.12958 3.48758 2.83281 41 - -
20601 1.38629 1.38629 1.38629 1.38629
20602 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20603 42 3.09320 2.59806 3.14118 0.17794 42 - -
20604 1.38629 1.38629 1.38629 1.38629
20605 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20606 43 0.14130 3.38481 2.80488 3.28690 43 - -
20607 1.38629 1.38629 1.38629 1.38629
20608 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20609 44 3.09320 2.59806 3.14118 0.17794 44 - -
20610 1.38629 1.38629 1.38629 1.38629
20611 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
20612 45 0.14130 3.38481 2.80488 3.28690 45 - -
20613 1.38629 1.38629 1.38629 1.38629
20614 0.01856 3.99580 * 1.46634 0.26236 0.00000 *
20615 //
20616 HMMER3/b [3.0 | March 2010]
20617 NAME 3_End_Metazoa_58S_end_twentysixc_long
20618 LENG 45
20619 ALPH DNA
20620 RF no
20621 CS no
20622 MAP yes
20623 DATE Sat Feb 25 14:42:34 2012
20624 NSEQ 3
20625 EFFN 3.000000
20626 CKSUM 2995473350
20627 STATS LOCAL MSV -7.8423 0.72105
20628 STATS LOCAL VITERBI -7.8409 0.72105
20629 STATS LOCAL FORWARD -4.0058 0.72105
20630 HMM A C G T
20631 m->m m->i m->d i->m i->i d->m d->d
20632 COMPO 1.38925 1.30984 1.63939 1.24905
20633 1.38629 1.38629 1.38629 1.38629
20634 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
20635 1 3.30705 0.14631 3.36166 2.73626 1 - -
20636 1.38629 1.38629 1.38629 1.38629
20637 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20638 2 0.15719 3.27118 2.73043 3.16274 2 - -
20639 1.38629 1.38629 1.38629 1.38629
20640 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20641 3 3.30705 0.14631 3.36166 2.73626 3 - -
20642 1.38629 1.38629 1.38629 1.38629
20643 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20644 4 0.15719 3.27118 2.73043 3.16274 4 - -
20645 1.38629 1.38629 1.38629 1.38629
20646 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20647 5 2.97980 2.52563 3.03204 0.19727 5 - -
20648 1.38629 1.38629 1.38629 1.38629
20649 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20650 6 3.30705 0.14631 3.36166 2.73626 6 - -
20651 1.38629 1.38629 1.38629 1.38629
20652 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20653 7 2.86982 3.47591 0.13017 3.36931 7 - -
20654 1.38629 1.38629 1.38629 1.38629
20655 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20656 8 2.97980 2.52563 3.03204 0.19727 8 - -
20657 1.38629 1.38629 1.38629 1.38629
20658 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20659 9 0.15719 3.27118 2.73043 3.16274 9 - -
20660 1.38629 1.38629 1.38629 1.38629
20661 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20662 10 3.30705 0.14631 3.36166 2.73626 10 - -
20663 1.38629 1.38629 1.38629 1.38629
20664 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20665 11 3.30705 0.14631 3.36166 2.73626 11 - -
20666 1.38629 1.38629 1.38629 1.38629
20667 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20668 12 2.97980 2.52563 3.03204 0.19727 12 - -
20669 1.38629 1.38629 1.38629 1.38629
20670 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20671 13 3.30705 0.14631 3.36166 2.73626 13 - -
20672 1.38629 1.38629 1.38629 1.38629
20673 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20674 14 3.30705 0.14631 3.36166 2.73626 14 - -
20675 1.38629 1.38629 1.38629 1.38629
20676 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20677 15 0.15719 3.27118 2.73043 3.16274 15 - -
20678 1.38629 1.38629 1.38629 1.38629
20679 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20680 16 2.86982 3.47591 0.13017 3.36931 16 - -
20681 1.38629 1.38629 1.38629 1.38629
20682 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20683 17 2.97980 2.52563 3.03204 0.19727 17 - -
20684 1.38629 1.38629 1.38629 1.38629
20685 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20686 18 1.34853 2.58976 0.54705 2.44542 18 - -
20687 1.38629 1.38629 1.38629 1.38629
20688 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20689 19 3.30705 0.14631 3.36166 2.73626 19 - -
20690 1.38629 1.38629 1.38629 1.38629
20691 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20692 20 2.86982 3.47591 0.13017 3.36931 20 - -
20693 1.38629 1.38629 1.38629 1.38629
20694 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20695 21 0.15719 3.27118 2.73043 3.16274 21 - -
20696 1.38629 1.38629 1.38629 1.38629
20697 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20698 22 2.97980 2.52563 3.03204 0.19727 22 - -
20699 1.38629 1.38629 1.38629 1.38629
20700 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20701 23 2.86982 3.47591 0.13017 3.36931 23 - -
20702 1.38629 1.38629 1.38629 1.38629
20703 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20704 24 2.97980 2.52563 3.03204 0.19727 24 - -
20705 1.38629 1.38629 1.38629 1.38629
20706 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20707 25 0.15719 3.27118 2.73043 3.16274 25 - -
20708 1.38629 1.38629 1.38629 1.38629
20709 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20710 26 3.30705 0.14631 3.36166 2.73626 26 - -
20711 1.38629 1.38629 1.38629 1.38629
20712 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20713 27 0.15719 3.27118 2.73043 3.16274 27 - -
20714 1.38629 1.38629 1.38629 1.38629
20715 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20716 28 3.30705 0.14631 3.36166 2.73626 28 - -
20717 1.38629 1.38629 1.38629 1.38629
20718 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20719 29 0.15719 3.27118 2.73043 3.16274 29 - -
20720 1.38629 1.38629 1.38629 1.38629
20721 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20722 30 2.97980 2.52563 3.03204 0.19727 30 - -
20723 1.38629 1.38629 1.38629 1.38629
20724 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20725 31 2.97980 2.52563 3.03204 0.19727 31 - -
20726 1.38629 1.38629 1.38629 1.38629
20727 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20728 32 2.97980 2.52563 3.03204 0.19727 32 - -
20729 1.38629 1.38629 1.38629 1.38629
20730 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20731 33 2.97980 2.52563 3.03204 0.19727 33 - -
20732 1.38629 1.38629 1.38629 1.38629
20733 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20734 34 2.97980 2.52563 3.03204 0.19727 34 - -
20735 1.38629 1.38629 1.38629 1.38629
20736 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20737 35 2.86982 3.47591 0.13017 3.36931 35 - -
20738 1.38629 1.38629 1.38629 1.38629
20739 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20740 36 0.15719 3.27118 2.73043 3.16274 36 - -
20741 1.38629 1.38629 1.38629 1.38629
20742 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20743 37 2.86982 3.47591 0.13017 3.36931 37 - -
20744 1.38629 1.38629 1.38629 1.38629
20745 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20746 38 2.97980 2.52563 3.03204 0.19727 38 - -
20747 1.38629 1.38629 1.38629 1.38629
20748 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20749 39 2.86982 3.47591 0.13017 3.36931 39 - -
20750 1.38629 1.38629 1.38629 1.38629
20751 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20752 40 3.30705 0.14631 3.36166 2.73626 40 - -
20753 1.38629 1.38629 1.38629 1.38629
20754 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20755 41 3.30705 0.14631 3.36166 2.73626 41 - -
20756 1.38629 1.38629 1.38629 1.38629
20757 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20758 42 2.97980 2.52563 3.03204 0.19727 42 - -
20759 1.38629 1.38629 1.38629 1.38629
20760 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20761 43 0.15719 3.27118 2.73043 3.16274 43 - -
20762 1.38629 1.38629 1.38629 1.38629
20763 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20764 44 2.97980 2.52563 3.03204 0.19727 44 - -
20765 1.38629 1.38629 1.38629 1.38629
20766 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20767 45 0.15719 3.27118 2.73043 3.16274 45 - -
20768 1.38629 1.38629 1.38629 1.38629
20769 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
20770 //
20771 HMMER3/b [3.0 | March 2010]
20772 NAME 3_End_Metazoa_58S_end_twentythree_long
20773 LENG 45
20774 ALPH DNA
20775 RF no
20776 CS no
20777 MAP yes
20778 DATE Sat Feb 25 14:41:43 2012
20779 NSEQ 5
20780 EFFN 3.168945
20781 CKSUM 2402151252
20782 STATS LOCAL MSV -8.2245 0.71933
20783 STATS LOCAL VITERBI -7.7908 0.71933
20784 STATS LOCAL FORWARD -3.7390 0.71933
20785 HMM A C G T
20786 m->m m->i m->d i->m i->i d->m d->d
20787 COMPO 2.19200 1.20214 1.09639 1.37168
20788 1.38629 1.38629 1.38629 1.38629
20789 0.03796 3.98322 3.98322 1.46634 0.26236 0.00000 *
20790 1 3.37482 0.13738 3.42671 2.78637 1 - -
20791 1.38629 1.38629 1.38629 1.38629
20792 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20793 2 2.91196 3.53626 0.12295 3.43565 2 - -
20794 1.38629 1.38629 1.38629 1.38629
20795 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20796 3 2.91196 3.53626 0.12295 3.43565 3 - -
20797 1.38629 1.38629 1.38629 1.38629
20798 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20799 4 0.14875 3.32976 2.76899 3.22669 4 - -
20800 1.38629 1.38629 1.38629 1.38629
20801 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20802 5 3.37482 0.13738 3.42671 2.78637 5 - -
20803 1.38629 1.38629 1.38629 1.38629
20804 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20805 6 3.37482 0.13738 3.42671 2.78637 6 - -
20806 1.38629 1.38629 1.38629 1.38629
20807 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20808 7 2.91196 3.53626 0.12295 3.43565 7 - -
20809 1.38629 1.38629 1.38629 1.38629
20810 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20811 8 2.91196 3.53626 0.12295 3.43565 8 - -
20812 1.38629 1.38629 1.38629 1.38629
20813 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20814 9 2.91196 3.53626 0.12295 3.43565 9 - -
20815 1.38629 1.38629 1.38629 1.38629
20816 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20817 10 2.91196 3.53626 0.12295 3.43565 10 - -
20818 1.38629 1.38629 1.38629 1.38629
20819 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20820 11 3.03791 2.56284 3.08799 0.18707 11 - -
20821 1.38629 1.38629 1.38629 1.38629
20822 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20823 12 3.03791 2.56284 3.08799 0.18707 12 - -
20824 1.38629 1.38629 1.38629 1.38629
20825 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20826 13 3.37482 0.13738 3.42671 2.78637 13 - -
20827 1.38629 1.38629 1.38629 1.38629
20828 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20829 14 2.91196 3.53626 0.12295 3.43565 14 - -
20830 1.38629 1.38629 1.38629 1.38629
20831 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20832 15 3.03791 2.56284 3.08799 0.18707 15 - -
20833 1.38629 1.38629 1.38629 1.38629
20834 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20835 16 3.37482 0.13738 3.42671 2.78637 16 - -
20836 1.38629 1.38629 1.38629 1.38629
20837 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20838 17 3.37482 0.13738 3.42671 2.78637 17 - -
20839 1.38629 1.38629 1.38629 1.38629
20840 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20841 18 3.37482 0.13738 3.42671 2.78637 18 - -
20842 1.38629 1.38629 1.38629 1.38629
20843 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20844 19 3.37482 0.13738 3.42671 2.78637 19 - -
20845 1.38629 1.38629 1.38629 1.38629
20846 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20847 20 3.03791 2.56284 3.08799 0.18707 20 - -
20848 1.38629 1.38629 1.38629 1.38629
20849 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20850 21 2.91196 3.53626 0.12295 3.43565 21 - -
20851 1.38629 1.38629 1.38629 1.38629
20852 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20853 22 3.03791 2.56284 3.08799 0.18707 22 - -
20854 1.38629 1.38629 1.38629 1.38629
20855 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20856 23 3.37482 0.13738 3.42671 2.78637 23 - -
20857 1.38629 1.38629 1.38629 1.38629
20858 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20859 24 3.37482 0.13738 3.42671 2.78637 24 - -
20860 1.38629 1.38629 1.38629 1.38629
20861 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20862 25 0.14875 3.32976 2.76899 3.22669 25 - -
20863 1.38629 1.38629 1.38629 1.38629
20864 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20865 26 3.03791 2.56284 3.08799 0.18707 26 - -
20866 1.38629 1.38629 1.38629 1.38629
20867 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20868 27 2.91196 3.53626 0.12295 3.43565 27 - -
20869 1.38629 1.38629 1.38629 1.38629
20870 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20871 28 3.03791 2.56284 3.08799 0.18707 28 - -
20872 1.38629 1.38629 1.38629 1.38629
20873 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20874 29 3.37482 0.13738 3.42671 2.78637 29 - -
20875 1.38629 1.38629 1.38629 1.38629
20876 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20877 30 3.03791 2.56284 3.08799 0.18707 30 - -
20878 1.38629 1.38629 1.38629 1.38629
20879 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20880 31 2.91196 3.53626 0.12295 3.43565 31 - -
20881 1.38629 1.38629 1.38629 1.38629
20882 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20883 32 2.91196 3.53626 0.12295 3.43565 32 - -
20884 1.38629 1.38629 1.38629 1.38629
20885 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20886 33 3.37482 0.13738 3.42671 2.78637 33 - -
20887 1.38629 1.38629 1.38629 1.38629
20888 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20889 34 3.03791 2.56284 3.08799 0.18707 34 - -
20890 1.38629 1.38629 1.38629 1.38629
20891 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20892 35 3.37482 0.13738 3.42671 2.78637 35 - -
20893 1.38629 1.38629 1.38629 1.38629
20894 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20895 36 0.14875 3.32976 2.76899 3.22669 36 - -
20896 1.38629 1.38629 1.38629 1.38629
20897 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20898 37 2.91196 3.53626 0.12295 3.43565 37 - -
20899 1.38629 1.38629 1.38629 1.38629
20900 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20901 38 2.91196 3.53626 0.12295 3.43565 38 - -
20902 1.38629 1.38629 1.38629 1.38629
20903 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20904 39 2.91196 3.53626 0.12295 3.43565 39 - -
20905 1.38629 1.38629 1.38629 1.38629
20906 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20907 40 3.03791 2.56284 3.08799 0.18707 40 - -
20908 1.38629 1.38629 1.38629 1.38629
20909 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20910 41 3.37482 0.13738 3.42671 2.78637 41 - -
20911 1.38629 1.38629 1.38629 1.38629
20912 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20913 42 2.91196 3.53626 0.12295 3.43565 42 - -
20914 1.38629 1.38629 1.38629 1.38629
20915 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20916 43 2.91196 3.53626 0.12295 3.43565 43 - -
20917 1.38629 1.38629 1.38629 1.38629
20918 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20919 44 3.03791 2.56284 3.08799 0.18707 44 - -
20920 1.38629 1.38629 1.38629 1.38629
20921 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
20922 45 3.03791 2.56284 3.08799 0.18707 45 - -
20923 1.38629 1.38629 1.38629 1.38629
20924 0.01916 3.96442 * 1.46634 0.26236 0.00000 *
20925 //
20926 HMMER3/b [3.0 | March 2010]
20927 NAME 3_End_Metazoa_58S_end_twentytwo_long
20928 LENG 45
20929 ALPH DNA
20930 RF no
20931 CS no
20932 MAP yes
20933 DATE Sat Feb 25 14:41:31 2012
20934 NSEQ 4
20935 EFFN 3.285156
20936 CKSUM 2170479953
20937 STATS LOCAL MSV -8.1192 0.71931
20938 STATS LOCAL VITERBI -7.6756 0.71931
20939 STATS LOCAL FORWARD -3.9175 0.71931
20940 HMM A C G T
20941 m->m m->i m->d i->m i->i d->m d->d
20942 COMPO 2.05755 1.37480 1.20037 1.14488
20943 1.38629 1.38629 1.38629 1.38629
20944 0.03714 4.00463 4.00463 1.46634 0.26236 0.00000 *
20945 1 3.41917 0.13188 3.46922 2.81884 1 - -
20946 1.38629 1.38629 1.38629 1.38629
20947 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20948 2 2.93908 3.57547 0.11851 3.47887 2 - -
20949 1.38629 1.38629 1.38629 1.38629
20950 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20951 3 2.93908 3.57547 0.11851 3.47887 3 - -
20952 1.38629 1.38629 1.38629 1.38629
20953 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20954 4 0.14350 3.36817 2.79406 3.26870 4 - -
20955 1.38629 1.38629 1.38629 1.38629
20956 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20957 5 3.41917 0.13188 3.46922 2.81884 5 - -
20958 1.38629 1.38629 1.38629 1.38629
20959 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20960 6 3.41917 0.13188 3.46922 2.81884 6 - -
20961 1.38629 1.38629 1.38629 1.38629
20962 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20963 7 2.93908 3.57547 0.11851 3.47887 7 - -
20964 1.38629 1.38629 1.38629 1.38629
20965 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20966 8 3.07642 2.58739 3.12504 0.18065 8 - -
20967 1.38629 1.38629 1.38629 1.38629
20968 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20969 9 2.93908 3.57547 0.11851 3.47887 9 - -
20970 1.38629 1.38629 1.38629 1.38629
20971 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20972 10 2.93908 3.57547 0.11851 3.47887 10 - -
20973 1.38629 1.38629 1.38629 1.38629
20974 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20975 11 3.07642 2.58739 3.12504 0.18065 11 - -
20976 1.38629 1.38629 1.38629 1.38629
20977 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20978 12 3.07642 2.58739 3.12504 0.18065 12 - -
20979 1.38629 1.38629 1.38629 1.38629
20980 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20981 13 3.07642 2.58739 3.12504 0.18065 13 - -
20982 1.38629 1.38629 1.38629 1.38629
20983 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20984 14 3.07642 2.58739 3.12504 0.18065 14 - -
20985 1.38629 1.38629 1.38629 1.38629
20986 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20987 15 3.07642 2.58739 3.12504 0.18065 15 - -
20988 1.38629 1.38629 1.38629 1.38629
20989 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20990 16 3.41917 0.13188 3.46922 2.81884 16 - -
20991 1.38629 1.38629 1.38629 1.38629
20992 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20993 17 3.07642 2.58739 3.12504 0.18065 17 - -
20994 1.38629 1.38629 1.38629 1.38629
20995 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20996 18 0.14350 3.36817 2.79406 3.26870 18 - -
20997 1.38629 1.38629 1.38629 1.38629
20998 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
20999 19 3.41917 0.13188 3.46922 2.81884 19 - -
21000 1.38629 1.38629 1.38629 1.38629
21001 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21002 20 3.07642 2.58739 3.12504 0.18065 20 - -
21003 1.38629 1.38629 1.38629 1.38629
21004 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21005 21 2.93908 3.57547 0.11851 3.47887 21 - -
21006 1.38629 1.38629 1.38629 1.38629
21007 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21008 22 3.07642 2.58739 3.12504 0.18065 22 - -
21009 1.38629 1.38629 1.38629 1.38629
21010 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21011 23 3.41917 0.13188 3.46922 2.81884 23 - -
21012 1.38629 1.38629 1.38629 1.38629
21013 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21014 24 3.41917 0.13188 3.46922 2.81884 24 - -
21015 1.38629 1.38629 1.38629 1.38629
21016 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21017 25 0.14350 3.36817 2.79406 3.26870 25 - -
21018 1.38629 1.38629 1.38629 1.38629
21019 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21020 26 3.07642 2.58739 3.12504 0.18065 26 - -
21021 1.38629 1.38629 1.38629 1.38629
21022 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21023 27 2.93908 3.57547 0.11851 3.47887 27 - -
21024 1.38629 1.38629 1.38629 1.38629
21025 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21026 28 3.07642 2.58739 3.12504 0.18065 28 - -
21027 1.38629 1.38629 1.38629 1.38629
21028 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21029 29 3.41917 0.13188 3.46922 2.81884 29 - -
21030 1.38629 1.38629 1.38629 1.38629
21031 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21032 30 3.07642 2.58739 3.12504 0.18065 30 - -
21033 1.38629 1.38629 1.38629 1.38629
21034 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21035 31 2.93908 3.57547 0.11851 3.47887 31 - -
21036 1.38629 1.38629 1.38629 1.38629
21037 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21038 32 2.93908 3.57547 0.11851 3.47887 32 - -
21039 1.38629 1.38629 1.38629 1.38629
21040 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21041 33 3.41917 0.13188 3.46922 2.81884 33 - -
21042 1.38629 1.38629 1.38629 1.38629
21043 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21044 34 3.07642 2.58739 3.12504 0.18065 34 - -
21045 1.38629 1.38629 1.38629 1.38629
21046 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21047 35 3.41917 0.13188 3.46922 2.81884 35 - -
21048 1.38629 1.38629 1.38629 1.38629
21049 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21050 36 0.14350 3.36817 2.79406 3.26870 36 - -
21051 1.38629 1.38629 1.38629 1.38629
21052 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21053 37 2.93908 3.57547 0.11851 3.47887 37 - -
21054 1.38629 1.38629 1.38629 1.38629
21055 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21056 38 2.93908 3.57547 0.11851 3.47887 38 - -
21057 1.38629 1.38629 1.38629 1.38629
21058 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21059 39 2.93908 3.57547 0.11851 3.47887 39 - -
21060 1.38629 1.38629 1.38629 1.38629
21061 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21062 40 3.07642 2.58739 3.12504 0.18065 40 - -
21063 1.38629 1.38629 1.38629 1.38629
21064 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21065 41 3.41917 0.13188 3.46922 2.81884 41 - -
21066 1.38629 1.38629 1.38629 1.38629
21067 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21068 42 2.93908 3.57547 0.11851 3.47887 42 - -
21069 1.38629 1.38629 1.38629 1.38629
21070 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21071 43 2.93908 3.57547 0.11851 3.47887 43 - -
21072 1.38629 1.38629 1.38629 1.38629
21073 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21074 44 3.07642 2.58739 3.12504 0.18065 44 - -
21075 1.38629 1.38629 1.38629 1.38629
21076 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
21077 45 3.07642 2.58739 3.12504 0.18065 45 - -
21078 1.38629 1.38629 1.38629 1.38629
21079 0.01874 3.98623 * 1.46634 0.26236 0.00000 *
21080 //
21081 HMMER3/b [3.0 | March 2010]
21082 NAME 3_End_Metazoa_58S_end_two_long
21083 LENG 45
21084 ALPH DNA
21085 RF no
21086 CS no
21087 MAP yes
21088 DATE Sat Feb 25 14:32:02 2012
21089 NSEQ 2
21090 EFFN 2.000000
21091 CKSUM 2895312499
21092 STATS LOCAL MSV -7.3425 0.72926
21093 STATS LOCAL VITERBI -8.4252 0.72926
21094 STATS LOCAL FORWARD -3.6064 0.72926
21095 HMM A C G T
21096 m->m m->i m->d i->m i->i d->m d->d
21097 COMPO 1.49454 1.29882 1.37030 1.39126
21098 1.38629 1.38629 1.38629 1.38629
21099 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
21100 1 2.81865 0.23582 2.88868 2.35662 1 - -
21101 1.38629 1.38629 1.38629 1.38629
21102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21103 2 2.57915 2.25909 2.64442 0.28946 2 - -
21104 1.38629 1.38629 1.38629 1.38629
21105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21106 3 2.57915 2.25909 2.64442 0.28946 3 - -
21107 1.38629 1.38629 1.38629 1.38629
21108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21109 4 2.57915 2.25909 2.64442 0.28946 4 - -
21110 1.38629 1.38629 1.38629 1.38629
21111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21112 5 2.53331 3.02441 0.20344 2.88069 5 - -
21113 1.38629 1.38629 1.38629 1.38629
21114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21115 6 2.53331 3.02441 0.20344 2.88069 6 - -
21116 1.38629 1.38629 1.38629 1.38629
21117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21118 7 2.53331 3.02441 0.20344 2.88069 7 - -
21119 1.38629 1.38629 1.38629 1.38629
21120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21121 8 0.23862 2.84929 2.43386 2.70756 8 - -
21122 1.38629 1.38629 1.38629 1.38629
21123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21124 9 2.81865 0.23582 2.88868 2.35662 9 - -
21125 1.38629 1.38629 1.38629 1.38629
21126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21127 10 2.57915 2.25909 2.64442 0.28946 10 - -
21128 1.38629 1.38629 1.38629 1.38629
21129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21130 11 2.57915 2.25909 2.64442 0.28946 11 - -
21131 1.38629 1.38629 1.38629 1.38629
21132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21133 12 2.81865 0.23582 2.88868 2.35662 12 - -
21134 1.38629 1.38629 1.38629 1.38629
21135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21136 13 1.01448 1.11006 1.95471 1.79419 13 - -
21137 1.38629 1.38629 1.38629 1.38629
21138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21139 14 0.23862 2.84929 2.43386 2.70756 14 - -
21140 1.38629 1.38629 1.38629 1.38629
21141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21142 15 2.57915 2.25909 2.64442 0.28946 15 - -
21143 1.38629 1.38629 1.38629 1.38629
21144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21145 16 2.81865 0.23582 2.88868 2.35662 16 - -
21146 1.38629 1.38629 1.38629 1.38629
21147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21148 17 2.57915 2.25909 2.64442 0.28946 17 - -
21149 1.38629 1.38629 1.38629 1.38629
21150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21151 18 2.81865 0.23582 2.88868 2.35662 18 - -
21152 1.38629 1.38629 1.38629 1.38629
21153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21154 19 0.23862 2.84929 2.43386 2.70756 19 - -
21155 1.38629 1.38629 1.38629 1.38629
21156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21157 20 0.23862 2.84929 2.43386 2.70756 20 - -
21158 1.38629 1.38629 1.38629 1.38629
21159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21160 21 0.23862 2.84929 2.43386 2.70756 21 - -
21161 1.38629 1.38629 1.38629 1.38629
21162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21163 22 2.53331 3.02441 0.20344 2.88069 22 - -
21164 1.38629 1.38629 1.38629 1.38629
21165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21166 23 2.81865 0.23582 2.88868 2.35662 23 - -
21167 1.38629 1.38629 1.38629 1.38629
21168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21169 24 2.81865 0.23582 2.88868 2.35662 24 - -
21170 1.38629 1.38629 1.38629 1.38629
21171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21172 25 0.23862 2.84929 2.43386 2.70756 25 - -
21173 1.38629 1.38629 1.38629 1.38629
21174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21175 26 2.81865 0.23582 2.88868 2.35662 26 - -
21176 1.38629 1.38629 1.38629 1.38629
21177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21178 27 2.53331 3.02441 0.20344 2.88069 27 - -
21179 1.38629 1.38629 1.38629 1.38629
21180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21181 28 2.81865 0.23582 2.88868 2.35662 28 - -
21182 1.38629 1.38629 1.38629 1.38629
21183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21184 29 2.81865 0.23582 2.88868 2.35662 29 - -
21185 1.38629 1.38629 1.38629 1.38629
21186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21187 30 2.57915 2.25909 2.64442 0.28946 30 - -
21188 1.38629 1.38629 1.38629 1.38629
21189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21190 31 2.53331 3.02441 0.20344 2.88069 31 - -
21191 1.38629 1.38629 1.38629 1.38629
21192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21193 32 2.57915 2.25909 2.64442 0.28946 32 - -
21194 1.38629 1.38629 1.38629 1.38629
21195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21196 33 2.57915 2.25909 2.64442 0.28946 33 - -
21197 1.38629 1.38629 1.38629 1.38629
21198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21199 34 2.81865 0.23582 2.88868 2.35662 34 - -
21200 1.38629 1.38629 1.38629 1.38629
21201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21202 35 2.53331 3.02441 0.20344 2.88069 35 - -
21203 1.38629 1.38629 1.38629 1.38629
21204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21205 36 0.23862 2.84929 2.43386 2.70756 36 - -
21206 1.38629 1.38629 1.38629 1.38629
21207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21208 37 2.53331 3.02441 0.20344 2.88069 37 - -
21209 1.38629 1.38629 1.38629 1.38629
21210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21211 38 2.53331 3.02441 0.20344 2.88069 38 - -
21212 1.38629 1.38629 1.38629 1.38629
21213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21214 39 2.53331 3.02441 0.20344 2.88069 39 - -
21215 1.38629 1.38629 1.38629 1.38629
21216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21217 40 2.15554 1.00938 2.23102 0.88601 40 - -
21218 1.38629 1.38629 1.38629 1.38629
21219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21220 41 2.57915 2.25909 2.64442 0.28946 41 - -
21221 1.38629 1.38629 1.38629 1.38629
21222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21223 42 2.53331 3.02441 0.20344 2.88069 42 - -
21224 1.38629 1.38629 1.38629 1.38629
21225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21226 43 0.23862 2.84929 2.43386 2.70756 43 - -
21227 1.38629 1.38629 1.38629 1.38629
21228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21229 44 0.23862 2.84929 2.43386 2.70756 44 - -
21230 1.38629 1.38629 1.38629 1.38629
21231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21232 45 2.81865 0.23582 2.88868 2.35662 45 - -
21233 1.38629 1.38629 1.38629 1.38629
21234 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
21235 //
21236 HMMER3/b [3.0 | March 2010]
21237 NAME 2_5.8_Metazoa_58S_start_eighta_long
21238 LENG 45
21239 ALPH DNA
21240 RF no
21241 CS no
21242 MAP yes
21243 DATE Fri Feb 24 23:21:27 2012
21244 NSEQ 6
21245 EFFN 3.717773
21246 CKSUM 2863453789
21247 STATS LOCAL MSV -7.0487 0.71932
21248 STATS LOCAL VITERBI -7.6344 0.71932
21249 STATS LOCAL FORWARD -4.3819 0.71932
21250 HMM A C G T
21251 m->m m->i m->d i->m i->i d->m d->d
21252 COMPO 1.38691 1.48592 1.27857 1.40476
21253 1.38629 1.38629 1.38629 1.38629
21254 0.03438 4.08055 4.08055 1.46634 0.26236 0.00000 *
21255 1 3.20992 2.67212 3.25337 0.16030 1 - -
21256 1.38629 1.38629 1.38629 1.38629
21257 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21258 2 3.20992 2.67212 3.25337 0.16030 2 - -
21259 1.38629 1.38629 1.38629 1.38629
21260 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21261 3 0.12719 3.49881 2.87844 3.41192 3 - -
21262 1.38629 1.38629 1.38629 1.38629
21263 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21264 4 2.56541 0.58969 2.63638 1.21405 4 - -
21265 1.38629 1.38629 1.38629 1.38629
21266 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21267 5 3.56911 0.11510 3.61260 2.92701 5 - -
21268 1.38629 1.38629 1.38629 1.38629
21269 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21270 6 3.56911 0.11510 3.61260 2.92701 6 - -
21271 1.38629 1.38629 1.38629 1.38629
21272 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21273 7 3.20992 2.67212 3.25337 0.16030 7 - -
21274 1.38629 1.38629 1.38629 1.38629
21275 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21276 8 3.02853 3.70662 0.10494 3.62394 8 - -
21277 1.38629 1.38629 1.38629 1.38629
21278 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21279 9 0.12719 3.49881 2.87844 3.41192 9 - -
21280 1.38629 1.38629 1.38629 1.38629
21281 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21282 10 0.12719 3.49881 2.87844 3.41192 10 - -
21283 1.38629 1.38629 1.38629 1.38629
21284 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21285 11 3.56911 0.11510 3.61260 2.92701 11 - -
21286 1.38629 1.38629 1.38629 1.38629
21287 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21288 12 3.02853 3.70662 0.10494 3.62394 12 - -
21289 1.38629 1.38629 1.38629 1.38629
21290 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21291 13 3.02853 3.70662 0.10494 3.62394 13 - -
21292 1.38629 1.38629 1.38629 1.38629
21293 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21294 14 3.20992 2.67212 3.25337 0.16030 14 - -
21295 1.38629 1.38629 1.38629 1.38629
21296 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21297 15 3.02853 3.70662 0.10494 3.62394 15 - -
21298 1.38629 1.38629 1.38629 1.38629
21299 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21300 16 3.02853 3.70662 0.10494 3.62394 16 - -
21301 1.38629 1.38629 1.38629 1.38629
21302 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21303 17 0.12719 3.49881 2.87844 3.41192 17 - -
21304 1.38629 1.38629 1.38629 1.38629
21305 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21306 18 3.20992 2.67212 3.25337 0.16030 18 - -
21307 1.38629 1.38629 1.38629 1.38629
21308 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21309 19 3.56911 0.11510 3.61260 2.92701 19 - -
21310 1.38629 1.38629 1.38629 1.38629
21311 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21312 20 0.12719 3.49881 2.87844 3.41192 20 - -
21313 1.38629 1.38629 1.38629 1.38629
21314 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21315 21 3.56911 0.11510 3.61260 2.92701 21 - -
21316 1.38629 1.38629 1.38629 1.38629
21317 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21318 22 3.20992 2.67212 3.25337 0.16030 22 - -
21319 1.38629 1.38629 1.38629 1.38629
21320 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21321 23 3.20992 2.67212 3.25337 0.16030 23 - -
21322 1.38629 1.38629 1.38629 1.38629
21323 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21324 24 3.02853 3.70662 0.10494 3.62394 24 - -
21325 1.38629 1.38629 1.38629 1.38629
21326 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21327 25 3.02853 3.70662 0.10494 3.62394 25 - -
21328 1.38629 1.38629 1.38629 1.38629
21329 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21330 26 3.56911 0.11510 3.61260 2.92701 26 - -
21331 1.38629 1.38629 1.38629 1.38629
21332 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21333 27 3.20992 2.67212 3.25337 0.16030 27 - -
21334 1.38629 1.38629 1.38629 1.38629
21335 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21336 28 3.56911 0.11510 3.61260 2.92701 28 - -
21337 1.38629 1.38629 1.38629 1.38629
21338 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21339 29 3.02853 3.70662 0.10494 3.62394 29 - -
21340 1.38629 1.38629 1.38629 1.38629
21341 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21342 30 3.20992 2.67212 3.25337 0.16030 30 - -
21343 1.38629 1.38629 1.38629 1.38629
21344 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21345 31 1.34314 2.72390 0.51432 2.58430 31 - -
21346 1.38629 1.38629 1.38629 1.38629
21347 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21348 32 1.34314 2.72390 0.51432 2.58430 32 - -
21349 1.38629 1.38629 1.38629 1.38629
21350 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21351 33 0.48700 2.71970 1.41005 2.58348 33 - -
21352 1.38629 1.38629 1.38629 1.38629
21353 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21354 34 3.20992 2.67212 3.25337 0.16030 34 - -
21355 1.38629 1.38629 1.38629 1.38629
21356 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21357 35 3.56911 0.11510 3.61260 2.92701 35 - -
21358 1.38629 1.38629 1.38629 1.38629
21359 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21360 36 3.02853 3.70662 0.10494 3.62394 36 - -
21361 1.38629 1.38629 1.38629 1.38629
21362 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21363 37 0.12719 3.49881 2.87844 3.41192 37 - -
21364 1.38629 1.38629 1.38629 1.38629
21365 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21366 38 3.20992 2.67212 3.25337 0.16030 38 - -
21367 1.38629 1.38629 1.38629 1.38629
21368 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21369 39 3.02853 3.70662 0.10494 3.62394 39 - -
21370 1.38629 1.38629 1.38629 1.38629
21371 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21372 40 0.12719 3.49881 2.87844 3.41192 40 - -
21373 1.38629 1.38629 1.38629 1.38629
21374 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21375 41 0.12719 3.49881 2.87844 3.41192 41 - -
21376 1.38629 1.38629 1.38629 1.38629
21377 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21378 42 3.02853 3.70662 0.10494 3.62394 42 - -
21379 1.38629 1.38629 1.38629 1.38629
21380 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21381 43 0.12719 3.49881 2.87844 3.41192 43 - -
21382 1.38629 1.38629 1.38629 1.38629
21383 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21384 44 0.12719 3.49881 2.87844 3.41192 44 - -
21385 1.38629 1.38629 1.38629 1.38629
21386 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547
21387 45 3.56911 0.11510 3.61260 2.92701 45 - -
21388 1.38629 1.38629 1.38629 1.38629
21389 0.01734 4.06350 * 1.46634 0.26236 0.00000 *
21390 //
21391 HMMER3/b [3.0 | March 2010]
21392 NAME 2_5.8_Metazoa_58S_start_eightb_long
21393 LENG 45
21394 ALPH DNA
21395 RF no
21396 CS no
21397 MAP yes
21398 DATE Fri Feb 24 23:21:34 2012
21399 NSEQ 5
21400 EFFN 3.139648
21401 CKSUM 359213837
21402 STATS LOCAL MSV -8.0901 0.71933
21403 STATS LOCAL VITERBI -7.7074 0.71933
21404 STATS LOCAL FORWARD -4.3936 0.71933
21405 HMM A C G T
21406 m->m m->i m->d i->m i->i d->m d->d
21407 COMPO 1.40304 1.33441 1.19644 1.66830
21408 1.38629 1.38629 1.38629 1.38629
21409 0.03818 3.97775 3.97775 1.46634 0.26236 0.00000 *
21410 1 3.36335 0.13885 3.41571 2.77793 1 - -
21411 1.38629 1.38629 1.38629 1.38629
21412 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21413 2 0.15014 3.31984 2.76249 3.21585 2 - -
21414 1.38629 1.38629 1.38629 1.38629
21415 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21416 3 0.15014 3.31984 2.76249 3.21585 3 - -
21417 1.38629 1.38629 1.38629 1.38629
21418 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21419 4 3.36335 0.13885 3.41571 2.77793 4 - -
21420 1.38629 1.38629 1.38629 1.38629
21421 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21422 5 3.36335 0.13885 3.41571 2.77793 5 - -
21423 1.38629 1.38629 1.38629 1.38629
21424 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21425 6 3.36335 0.13885 3.41571 2.77793 6 - -
21426 1.38629 1.38629 1.38629 1.38629
21427 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21428 7 3.02802 2.55652 3.07847 0.18876 7 - -
21429 1.38629 1.38629 1.38629 1.38629
21430 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21431 8 2.90489 3.52608 0.12414 3.42445 8 - -
21432 1.38629 1.38629 1.38629 1.38629
21433 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21434 9 0.15014 3.31984 2.76249 3.21585 9 - -
21435 1.38629 1.38629 1.38629 1.38629
21436 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21437 10 0.15014 3.31984 2.76249 3.21585 10 - -
21438 1.38629 1.38629 1.38629 1.38629
21439 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21440 11 3.36335 0.13885 3.41571 2.77793 11 - -
21441 1.38629 1.38629 1.38629 1.38629
21442 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21443 12 2.90489 3.52608 0.12414 3.42445 12 - -
21444 1.38629 1.38629 1.38629 1.38629
21445 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21446 13 2.90489 3.52608 0.12414 3.42445 13 - -
21447 1.38629 1.38629 1.38629 1.38629
21448 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21449 14 3.02802 2.55652 3.07847 0.18876 14 - -
21450 1.38629 1.38629 1.38629 1.38629
21451 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21452 15 2.90489 3.52608 0.12414 3.42445 15 - -
21453 1.38629 1.38629 1.38629 1.38629
21454 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21455 16 2.90489 3.52608 0.12414 3.42445 16 - -
21456 1.38629 1.38629 1.38629 1.38629
21457 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21458 17 0.15014 3.31984 2.76249 3.21585 17 - -
21459 1.38629 1.38629 1.38629 1.38629
21460 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21461 18 3.02802 2.55652 3.07847 0.18876 18 - -
21462 1.38629 1.38629 1.38629 1.38629
21463 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21464 19 3.36335 0.13885 3.41571 2.77793 19 - -
21465 1.38629 1.38629 1.38629 1.38629
21466 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21467 20 0.15014 3.31984 2.76249 3.21585 20 - -
21468 1.38629 1.38629 1.38629 1.38629
21469 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21470 21 3.36335 0.13885 3.41571 2.77793 21 - -
21471 1.38629 1.38629 1.38629 1.38629
21472 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21473 22 3.02802 2.55652 3.07847 0.18876 22 - -
21474 1.38629 1.38629 1.38629 1.38629
21475 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21476 23 3.36335 0.13885 3.41571 2.77793 23 - -
21477 1.38629 1.38629 1.38629 1.38629
21478 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21479 24 2.90489 3.52608 0.12414 3.42445 24 - -
21480 1.38629 1.38629 1.38629 1.38629
21481 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21482 25 2.90489 3.52608 0.12414 3.42445 25 - -
21483 1.38629 1.38629 1.38629 1.38629
21484 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21485 26 3.36335 0.13885 3.41571 2.77793 26 - -
21486 1.38629 1.38629 1.38629 1.38629
21487 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21488 27 3.02802 2.55652 3.07847 0.18876 27 - -
21489 1.38629 1.38629 1.38629 1.38629
21490 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21491 28 3.36335 0.13885 3.41571 2.77793 28 - -
21492 1.38629 1.38629 1.38629 1.38629
21493 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21494 29 2.90489 3.52608 0.12414 3.42445 29 - -
21495 1.38629 1.38629 1.38629 1.38629
21496 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21497 30 3.02802 2.55652 3.07847 0.18876 30 - -
21498 1.38629 1.38629 1.38629 1.38629
21499 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21500 31 2.90489 3.52608 0.12414 3.42445 31 - -
21501 1.38629 1.38629 1.38629 1.38629
21502 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21503 32 2.90489 3.52608 0.12414 3.42445 32 - -
21504 1.38629 1.38629 1.38629 1.38629
21505 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21506 33 2.90489 3.52608 0.12414 3.42445 33 - -
21507 1.38629 1.38629 1.38629 1.38629
21508 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21509 34 3.02802 2.55652 3.07847 0.18876 34 - -
21510 1.38629 1.38629 1.38629 1.38629
21511 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21512 35 3.36335 0.13885 3.41571 2.77793 35 - -
21513 1.38629 1.38629 1.38629 1.38629
21514 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21515 36 2.90489 3.52608 0.12414 3.42445 36 - -
21516 1.38629 1.38629 1.38629 1.38629
21517 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21518 37 0.15014 3.31984 2.76249 3.21585 37 - -
21519 1.38629 1.38629 1.38629 1.38629
21520 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21521 38 3.02802 2.55652 3.07847 0.18876 38 - -
21522 1.38629 1.38629 1.38629 1.38629
21523 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21524 39 2.90489 3.52608 0.12414 3.42445 39 - -
21525 1.38629 1.38629 1.38629 1.38629
21526 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21527 40 0.15014 3.31984 2.76249 3.21585 40 - -
21528 1.38629 1.38629 1.38629 1.38629
21529 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21530 41 0.15014 3.31984 2.76249 3.21585 41 - -
21531 1.38629 1.38629 1.38629 1.38629
21532 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21533 42 2.90489 3.52608 0.12414 3.42445 42 - -
21534 1.38629 1.38629 1.38629 1.38629
21535 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21536 43 0.15014 3.31984 2.76249 3.21585 43 - -
21537 1.38629 1.38629 1.38629 1.38629
21538 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21539 44 0.15014 3.31984 2.76249 3.21585 44 - -
21540 1.38629 1.38629 1.38629 1.38629
21541 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
21542 45 3.36335 0.13885 3.41571 2.77793 45 - -
21543 1.38629 1.38629 1.38629 1.38629
21544 0.01927 3.95884 * 1.46634 0.26236 0.00000 *
21545 //
21546 HMMER3/b [3.0 | March 2010]
21547 NAME 2_5.8_Metazoa_58S_start_eightc_long
21548 LENG 45
21549 ALPH DNA
21550 RF no
21551 CS no
21552 MAP yes
21553 DATE Fri Feb 24 23:21:40 2012
21554 NSEQ 6
21555 EFFN 3.131836
21556 CKSUM 2150464050
21557 STATS LOCAL MSV -7.9202 0.71931
21558 STATS LOCAL VITERBI -7.7385 0.71931
21559 STATS LOCAL FORWARD -4.2104 0.71931
21560 HMM A C G T
21561 m->m m->i m->d i->m i->i d->m d->d
21562 COMPO 1.47401 1.33573 1.14243 1.66609
21563 1.38629 1.38629 1.38629 1.38629
21564 0.03823 3.97628 3.97628 1.46634 0.26236 0.00000 *
21565 1 3.02537 2.55482 3.07592 0.18922 1 - -
21566 1.38629 1.38629 1.38629 1.38629
21567 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21568 2 3.36028 0.13924 3.41276 2.77566 2 - -
21569 1.38629 1.38629 1.38629 1.38629
21570 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21571 3 0.15052 3.31717 2.76074 3.21294 3 - -
21572 1.38629 1.38629 1.38629 1.38629
21573 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21574 4 3.36028 0.13924 3.41276 2.77566 4 - -
21575 1.38629 1.38629 1.38629 1.38629
21576 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21577 5 3.36028 0.13924 3.41276 2.77566 5 - -
21578 1.38629 1.38629 1.38629 1.38629
21579 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21580 6 3.36028 0.13924 3.41276 2.77566 6 - -
21581 1.38629 1.38629 1.38629 1.38629
21582 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21583 7 0.15052 3.31717 2.76074 3.21294 7 - -
21584 1.38629 1.38629 1.38629 1.38629
21585 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21586 8 2.90299 3.52335 0.12446 3.42144 8 - -
21587 1.38629 1.38629 1.38629 1.38629
21588 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21589 9 2.90299 3.52335 0.12446 3.42144 9 - -
21590 1.38629 1.38629 1.38629 1.38629
21591 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21592 10 0.15052 3.31717 2.76074 3.21294 10 - -
21593 1.38629 1.38629 1.38629 1.38629
21594 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21595 11 3.36028 0.13924 3.41276 2.77566 11 - -
21596 1.38629 1.38629 1.38629 1.38629
21597 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21598 12 2.90299 3.52335 0.12446 3.42144 12 - -
21599 1.38629 1.38629 1.38629 1.38629
21600 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21601 13 2.90299 3.52335 0.12446 3.42144 13 - -
21602 1.38629 1.38629 1.38629 1.38629
21603 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21604 14 3.02537 2.55482 3.07592 0.18922 14 - -
21605 1.38629 1.38629 1.38629 1.38629
21606 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21607 15 2.90299 3.52335 0.12446 3.42144 15 - -
21608 1.38629 1.38629 1.38629 1.38629
21609 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21610 16 2.90299 3.52335 0.12446 3.42144 16 - -
21611 1.38629 1.38629 1.38629 1.38629
21612 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21613 17 0.15052 3.31717 2.76074 3.21294 17 - -
21614 1.38629 1.38629 1.38629 1.38629
21615 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21616 18 3.02537 2.55482 3.07592 0.18922 18 - -
21617 1.38629 1.38629 1.38629 1.38629
21618 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21619 19 3.36028 0.13924 3.41276 2.77566 19 - -
21620 1.38629 1.38629 1.38629 1.38629
21621 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21622 20 0.15052 3.31717 2.76074 3.21294 20 - -
21623 1.38629 1.38629 1.38629 1.38629
21624 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21625 21 3.36028 0.13924 3.41276 2.77566 21 - -
21626 1.38629 1.38629 1.38629 1.38629
21627 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21628 22 3.02537 2.55482 3.07592 0.18922 22 - -
21629 1.38629 1.38629 1.38629 1.38629
21630 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21631 23 3.36028 0.13924 3.41276 2.77566 23 - -
21632 1.38629 1.38629 1.38629 1.38629
21633 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21634 24 2.90299 3.52335 0.12446 3.42144 24 - -
21635 1.38629 1.38629 1.38629 1.38629
21636 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21637 25 2.90299 3.52335 0.12446 3.42144 25 - -
21638 1.38629 1.38629 1.38629 1.38629
21639 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21640 26 3.36028 0.13924 3.41276 2.77566 26 - -
21641 1.38629 1.38629 1.38629 1.38629
21642 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21643 27 3.02537 2.55482 3.07592 0.18922 27 - -
21644 1.38629 1.38629 1.38629 1.38629
21645 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21646 28 3.36028 0.13924 3.41276 2.77566 28 - -
21647 1.38629 1.38629 1.38629 1.38629
21648 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21649 29 2.90299 3.52335 0.12446 3.42144 29 - -
21650 1.38629 1.38629 1.38629 1.38629
21651 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21652 30 3.02537 2.55482 3.07592 0.18922 30 - -
21653 1.38629 1.38629 1.38629 1.38629
21654 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21655 31 2.90299 3.52335 0.12446 3.42144 31 - -
21656 1.38629 1.38629 1.38629 1.38629
21657 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21658 32 2.90299 3.52335 0.12446 3.42144 32 - -
21659 1.38629 1.38629 1.38629 1.38629
21660 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21661 33 2.90299 3.52335 0.12446 3.42144 33 - -
21662 1.38629 1.38629 1.38629 1.38629
21663 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21664 34 3.02537 2.55482 3.07592 0.18922 34 - -
21665 1.38629 1.38629 1.38629 1.38629
21666 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21667 35 3.36028 0.13924 3.41276 2.77566 35 - -
21668 1.38629 1.38629 1.38629 1.38629
21669 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21670 36 2.90299 3.52335 0.12446 3.42144 36 - -
21671 1.38629 1.38629 1.38629 1.38629
21672 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21673 37 0.15052 3.31717 2.76074 3.21294 37 - -
21674 1.38629 1.38629 1.38629 1.38629
21675 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21676 38 3.02537 2.55482 3.07592 0.18922 38 - -
21677 1.38629 1.38629 1.38629 1.38629
21678 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21679 39 2.90299 3.52335 0.12446 3.42144 39 - -
21680 1.38629 1.38629 1.38629 1.38629
21681 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21682 40 0.15052 3.31717 2.76074 3.21294 40 - -
21683 1.38629 1.38629 1.38629 1.38629
21684 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21685 41 0.15052 3.31717 2.76074 3.21294 41 - -
21686 1.38629 1.38629 1.38629 1.38629
21687 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21688 42 2.90299 3.52335 0.12446 3.42144 42 - -
21689 1.38629 1.38629 1.38629 1.38629
21690 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21691 43 0.15052 3.31717 2.76074 3.21294 43 - -
21692 1.38629 1.38629 1.38629 1.38629
21693 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21694 44 0.15052 3.31717 2.76074 3.21294 44 - -
21695 1.38629 1.38629 1.38629 1.38629
21696 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
21697 45 3.36028 0.13924 3.41276 2.77566 45 - -
21698 1.38629 1.38629 1.38629 1.38629
21699 0.01930 3.95735 * 1.46634 0.26236 0.00000 *
21700 //
21701 HMMER3/b [3.0 | March 2010]
21702 NAME 2_5.8_Metazoa_58S_start_eightd_long
21703 LENG 45
21704 ALPH DNA
21705 RF no
21706 CS no
21707 MAP yes
21708 DATE Fri Feb 24 23:21:46 2012
21709 NSEQ 4
21710 EFFN 3.144531
21711 CKSUM 621050015
21712 STATS LOCAL MSV -8.0901 0.71931
21713 STATS LOCAL VITERBI -7.7041 0.71931
21714 STATS LOCAL FORWARD -4.3950 0.71931
21715 HMM A C G T
21716 m->m m->i m->d i->m i->i d->m d->d
21717 COMPO 1.40305 1.33436 1.19640 1.66841
21718 1.38629 1.38629 1.38629 1.38629
21719 0.03814 3.97866 3.97866 1.46634 0.26236 0.00000 *
21720 1 3.36527 0.13860 3.41755 2.77934 1 - -
21721 1.38629 1.38629 1.38629 1.38629
21722 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21723 2 0.14991 3.32150 2.76358 3.21766 2 - -
21724 1.38629 1.38629 1.38629 1.38629
21725 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21726 3 0.14991 3.32150 2.76358 3.21766 3 - -
21727 1.38629 1.38629 1.38629 1.38629
21728 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21729 4 3.36527 0.13860 3.41755 2.77934 4 - -
21730 1.38629 1.38629 1.38629 1.38629
21731 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21732 5 3.36527 0.13860 3.41755 2.77934 5 - -
21733 1.38629 1.38629 1.38629 1.38629
21734 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21735 6 3.36527 0.13860 3.41755 2.77934 6 - -
21736 1.38629 1.38629 1.38629 1.38629
21737 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21738 7 3.02967 2.55757 3.08006 0.18848 7 - -
21739 1.38629 1.38629 1.38629 1.38629
21740 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21741 8 2.90608 3.52778 0.12394 3.42632 8 - -
21742 1.38629 1.38629 1.38629 1.38629
21743 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21744 9 0.14991 3.32150 2.76358 3.21766 9 - -
21745 1.38629 1.38629 1.38629 1.38629
21746 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21747 10 0.14991 3.32150 2.76358 3.21766 10 - -
21748 1.38629 1.38629 1.38629 1.38629
21749 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21750 11 3.36527 0.13860 3.41755 2.77934 11 - -
21751 1.38629 1.38629 1.38629 1.38629
21752 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21753 12 2.90608 3.52778 0.12394 3.42632 12 - -
21754 1.38629 1.38629 1.38629 1.38629
21755 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21756 13 2.90608 3.52778 0.12394 3.42632 13 - -
21757 1.38629 1.38629 1.38629 1.38629
21758 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21759 14 3.02967 2.55757 3.08006 0.18848 14 - -
21760 1.38629 1.38629 1.38629 1.38629
21761 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21762 15 2.90608 3.52778 0.12394 3.42632 15 - -
21763 1.38629 1.38629 1.38629 1.38629
21764 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21765 16 2.90608 3.52778 0.12394 3.42632 16 - -
21766 1.38629 1.38629 1.38629 1.38629
21767 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21768 17 0.14991 3.32150 2.76358 3.21766 17 - -
21769 1.38629 1.38629 1.38629 1.38629
21770 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21771 18 3.02967 2.55757 3.08006 0.18848 18 - -
21772 1.38629 1.38629 1.38629 1.38629
21773 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21774 19 3.36527 0.13860 3.41755 2.77934 19 - -
21775 1.38629 1.38629 1.38629 1.38629
21776 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21777 20 0.14991 3.32150 2.76358 3.21766 20 - -
21778 1.38629 1.38629 1.38629 1.38629
21779 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21780 21 3.36527 0.13860 3.41755 2.77934 21 - -
21781 1.38629 1.38629 1.38629 1.38629
21782 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21783 22 3.02967 2.55757 3.08006 0.18848 22 - -
21784 1.38629 1.38629 1.38629 1.38629
21785 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21786 23 3.36527 0.13860 3.41755 2.77934 23 - -
21787 1.38629 1.38629 1.38629 1.38629
21788 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21789 24 2.90608 3.52778 0.12394 3.42632 24 - -
21790 1.38629 1.38629 1.38629 1.38629
21791 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21792 25 2.90608 3.52778 0.12394 3.42632 25 - -
21793 1.38629 1.38629 1.38629 1.38629
21794 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21795 26 3.36527 0.13860 3.41755 2.77934 26 - -
21796 1.38629 1.38629 1.38629 1.38629
21797 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21798 27 3.02967 2.55757 3.08006 0.18848 27 - -
21799 1.38629 1.38629 1.38629 1.38629
21800 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21801 28 3.36527 0.13860 3.41755 2.77934 28 - -
21802 1.38629 1.38629 1.38629 1.38629
21803 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21804 29 2.90608 3.52778 0.12394 3.42632 29 - -
21805 1.38629 1.38629 1.38629 1.38629
21806 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21807 30 3.02967 2.55757 3.08006 0.18848 30 - -
21808 1.38629 1.38629 1.38629 1.38629
21809 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21810 31 2.90608 3.52778 0.12394 3.42632 31 - -
21811 1.38629 1.38629 1.38629 1.38629
21812 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21813 32 2.90608 3.52778 0.12394 3.42632 32 - -
21814 1.38629 1.38629 1.38629 1.38629
21815 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21816 33 2.90608 3.52778 0.12394 3.42632 33 - -
21817 1.38629 1.38629 1.38629 1.38629
21818 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21819 34 3.02967 2.55757 3.08006 0.18848 34 - -
21820 1.38629 1.38629 1.38629 1.38629
21821 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21822 35 3.36527 0.13860 3.41755 2.77934 35 - -
21823 1.38629 1.38629 1.38629 1.38629
21824 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21825 36 2.90608 3.52778 0.12394 3.42632 36 - -
21826 1.38629 1.38629 1.38629 1.38629
21827 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21828 37 0.14991 3.32150 2.76358 3.21766 37 - -
21829 1.38629 1.38629 1.38629 1.38629
21830 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21831 38 3.02967 2.55757 3.08006 0.18848 38 - -
21832 1.38629 1.38629 1.38629 1.38629
21833 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21834 39 2.90608 3.52778 0.12394 3.42632 39 - -
21835 1.38629 1.38629 1.38629 1.38629
21836 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21837 40 0.14991 3.32150 2.76358 3.21766 40 - -
21838 1.38629 1.38629 1.38629 1.38629
21839 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21840 41 0.14991 3.32150 2.76358 3.21766 41 - -
21841 1.38629 1.38629 1.38629 1.38629
21842 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21843 42 2.90608 3.52778 0.12394 3.42632 42 - -
21844 1.38629 1.38629 1.38629 1.38629
21845 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21846 43 0.14991 3.32150 2.76358 3.21766 43 - -
21847 1.38629 1.38629 1.38629 1.38629
21848 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21849 44 0.14991 3.32150 2.76358 3.21766 44 - -
21850 1.38629 1.38629 1.38629 1.38629
21851 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547
21852 45 3.36527 0.13860 3.41755 2.77934 45 - -
21853 1.38629 1.38629 1.38629 1.38629
21854 0.01925 3.95977 * 1.46634 0.26236 0.00000 *
21855 //
21856 HMMER3/b [3.0 | March 2010]
21857 NAME 2_5.8_Metazoa_58S_start_eighteen_long
21858 LENG 45
21859 ALPH DNA
21860 RF no
21861 CS no
21862 MAP yes
21863 DATE Fri Feb 24 23:25:28 2012
21864 NSEQ 4
21865 EFFN 3.402344
21866 CKSUM 2172714013
21867 STATS LOCAL MSV -7.1051 0.71931
21868 STATS LOCAL VITERBI -7.8590 0.71931
21869 STATS LOCAL FORWARD -3.9748 0.71931
21870 HMM A C G T
21871 m->m m->i m->d i->m i->i d->m d->d
21872 COMPO 1.32697 1.77182 1.24425 1.28540
21873 1.38629 1.38629 1.38629 1.38629
21874 0.03635 4.02577 4.02577 1.46634 0.26236 0.00000 *
21875 1 0.13862 3.40543 2.81825 3.30949 1 - -
21876 1.38629 1.38629 1.38629 1.38629
21877 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21878 2 3.11409 2.61134 3.16126 0.17462 2 - -
21879 1.38629 1.38629 1.38629 1.38629
21880 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21881 3 0.13862 3.40543 2.81825 3.30949 3 - -
21882 1.38629 1.38629 1.38629 1.38629
21883 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21884 4 2.41957 0.95497 2.49149 0.81322 4 - -
21885 1.38629 1.38629 1.38629 1.38629
21886 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21887 5 3.11409 2.61134 3.16126 0.17462 5 - -
21888 1.38629 1.38629 1.38629 1.38629
21889 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21890 6 3.11409 2.61134 3.16126 0.17462 6 - -
21891 1.38629 1.38629 1.38629 1.38629
21892 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21893 7 3.11409 2.61134 3.16126 0.17462 7 - -
21894 1.38629 1.38629 1.38629 1.38629
21895 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21896 8 2.96500 3.61323 0.11441 3.52056 8 - -
21897 1.38629 1.38629 1.38629 1.38629
21898 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21899 9 0.13862 3.40543 2.81825 3.30949 9 - -
21900 1.38629 1.38629 1.38629 1.38629
21901 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21902 10 2.96500 3.61323 0.11441 3.52056 10 - -
21903 1.38629 1.38629 1.38629 1.38629
21904 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21905 11 3.46209 0.12680 3.51031 2.85005 11 - -
21906 1.38629 1.38629 1.38629 1.38629
21907 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21908 12 0.13862 3.40543 2.81825 3.30949 12 - -
21909 1.38629 1.38629 1.38629 1.38629
21910 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21911 13 2.96500 3.61323 0.11441 3.52056 13 - -
21912 1.38629 1.38629 1.38629 1.38629
21913 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21914 14 3.11409 2.61134 3.16126 0.17462 14 - -
21915 1.38629 1.38629 1.38629 1.38629
21916 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21917 15 2.96500 3.61323 0.11441 3.52056 15 - -
21918 1.38629 1.38629 1.38629 1.38629
21919 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21920 16 2.96500 3.61323 0.11441 3.52056 16 - -
21921 1.38629 1.38629 1.38629 1.38629
21922 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21923 17 0.13862 3.40543 2.81825 3.30949 17 - -
21924 1.38629 1.38629 1.38629 1.38629
21925 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21926 18 3.11409 2.61134 3.16126 0.17462 18 - -
21927 1.38629 1.38629 1.38629 1.38629
21928 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21929 19 3.46209 0.12680 3.51031 2.85005 19 - -
21930 1.38629 1.38629 1.38629 1.38629
21931 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21932 20 0.13862 3.40543 2.81825 3.30949 20 - -
21933 1.38629 1.38629 1.38629 1.38629
21934 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21935 21 3.46209 0.12680 3.51031 2.85005 21 - -
21936 1.38629 1.38629 1.38629 1.38629
21937 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21938 22 3.11409 2.61134 3.16126 0.17462 22 - -
21939 1.38629 1.38629 1.38629 1.38629
21940 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21941 23 2.96500 3.61323 0.11441 3.52056 23 - -
21942 1.38629 1.38629 1.38629 1.38629
21943 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21944 24 2.96500 3.61323 0.11441 3.52056 24 - -
21945 1.38629 1.38629 1.38629 1.38629
21946 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21947 25 2.96500 3.61323 0.11441 3.52056 25 - -
21948 1.38629 1.38629 1.38629 1.38629
21949 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21950 26 3.11409 2.61134 3.16126 0.17462 26 - -
21951 1.38629 1.38629 1.38629 1.38629
21952 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21953 27 3.11409 2.61134 3.16126 0.17462 27 - -
21954 1.38629 1.38629 1.38629 1.38629
21955 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21956 28 3.46209 0.12680 3.51031 2.85005 28 - -
21957 1.38629 1.38629 1.38629 1.38629
21958 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21959 29 2.96500 3.61323 0.11441 3.52056 29 - -
21960 1.38629 1.38629 1.38629 1.38629
21961 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21962 30 3.11409 2.61134 3.16126 0.17462 30 - -
21963 1.38629 1.38629 1.38629 1.38629
21964 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21965 31 3.11409 2.61134 3.16126 0.17462 31 - -
21966 1.38629 1.38629 1.38629 1.38629
21967 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21968 32 2.96500 3.61323 0.11441 3.52056 32 - -
21969 1.38629 1.38629 1.38629 1.38629
21970 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21971 33 2.96500 3.61323 0.11441 3.52056 33 - -
21972 1.38629 1.38629 1.38629 1.38629
21973 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21974 34 3.11409 2.61134 3.16126 0.17462 34 - -
21975 1.38629 1.38629 1.38629 1.38629
21976 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21977 35 3.46209 0.12680 3.51031 2.85005 35 - -
21978 1.38629 1.38629 1.38629 1.38629
21979 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21980 36 2.96500 3.61323 0.11441 3.52056 36 - -
21981 1.38629 1.38629 1.38629 1.38629
21982 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21983 37 0.13862 3.40543 2.81825 3.30949 37 - -
21984 1.38629 1.38629 1.38629 1.38629
21985 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21986 38 3.11409 2.61134 3.16126 0.17462 38 - -
21987 1.38629 1.38629 1.38629 1.38629
21988 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21989 39 2.96500 3.61323 0.11441 3.52056 39 - -
21990 1.38629 1.38629 1.38629 1.38629
21991 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21992 40 0.13862 3.40543 2.81825 3.30949 40 - -
21993 1.38629 1.38629 1.38629 1.38629
21994 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21995 41 0.13862 3.40543 2.81825 3.30949 41 - -
21996 1.38629 1.38629 1.38629 1.38629
21997 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
21998 42 0.13862 3.40543 2.81825 3.30949 42 - -
21999 1.38629 1.38629 1.38629 1.38629
22000 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
22001 43 0.13862 3.40543 2.81825 3.30949 43 - -
22002 1.38629 1.38629 1.38629 1.38629
22003 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
22004 44 0.13862 3.40543 2.81825 3.30949 44 - -
22005 1.38629 1.38629 1.38629 1.38629
22006 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547
22007 45 3.46209 0.12680 3.51031 2.85005 45 - -
22008 1.38629 1.38629 1.38629 1.38629
22009 0.01834 4.00776 * 1.46634 0.26236 0.00000 *
22010 //
22011 HMMER3/b [3.0 | March 2010]
22012 NAME 2_5.8_Metazoa_58S_start_eleven_long
22013 LENG 45
22014 ALPH DNA
22015 RF no
22016 CS no
22017 MAP yes
22018 DATE Fri Feb 24 23:22:19 2012
22019 NSEQ 3
22020 EFFN 3.000000
22021 CKSUM 102249527
22022 STATS LOCAL MSV -7.9658 0.72022
22023 STATS LOCAL VITERBI -7.9027 0.72022
22024 STATS LOCAL FORWARD -4.1930 0.72022
22025 HMM A C G T
22026 m->m m->i m->d i->m i->i d->m d->d
22027 COMPO 1.40169 1.39125 1.31583 1.44052
22028 1.38629 1.38629 1.38629 1.38629
22029 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
22030 1 3.30705 0.14631 3.36166 2.73626 1 - -
22031 1.38629 1.38629 1.38629 1.38629
22032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22033 2 0.15719 3.27118 2.73043 3.16274 2 - -
22034 1.38629 1.38629 1.38629 1.38629
22035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22036 3 0.15719 3.27118 2.73043 3.16274 3 - -
22037 1.38629 1.38629 1.38629 1.38629
22038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22039 4 0.15719 3.27118 2.73043 3.16274 4 - -
22040 1.38629 1.38629 1.38629 1.38629
22041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22042 5 3.30705 0.14631 3.36166 2.73626 5 - -
22043 1.38629 1.38629 1.38629 1.38629
22044 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22045 6 3.30705 0.14631 3.36166 2.73626 6 - -
22046 1.38629 1.38629 1.38629 1.38629
22047 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22048 7 0.15719 3.27118 2.73043 3.16274 7 - -
22049 1.38629 1.38629 1.38629 1.38629
22050 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22051 8 2.97980 2.52563 3.03204 0.19727 8 - -
22052 1.38629 1.38629 1.38629 1.38629
22053 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22054 9 2.97980 2.52563 3.03204 0.19727 9 - -
22055 1.38629 1.38629 1.38629 1.38629
22056 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22057 10 2.97980 2.52563 3.03204 0.19727 10 - -
22058 1.38629 1.38629 1.38629 1.38629
22059 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22060 11 3.30705 0.14631 3.36166 2.73626 11 - -
22061 1.38629 1.38629 1.38629 1.38629
22062 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22063 12 0.15719 3.27118 2.73043 3.16274 12 - -
22064 1.38629 1.38629 1.38629 1.38629
22065 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22066 13 2.86982 3.47591 0.13017 3.36931 13 - -
22067 1.38629 1.38629 1.38629 1.38629
22068 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22069 14 2.97980 2.52563 3.03204 0.19727 14 - -
22070 1.38629 1.38629 1.38629 1.38629
22071 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22072 15 2.86982 3.47591 0.13017 3.36931 15 - -
22073 1.38629 1.38629 1.38629 1.38629
22074 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22075 16 2.86982 3.47591 0.13017 3.36931 16 - -
22076 1.38629 1.38629 1.38629 1.38629
22077 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22078 17 0.15719 3.27118 2.73043 3.16274 17 - -
22079 1.38629 1.38629 1.38629 1.38629
22080 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22081 18 2.97980 2.52563 3.03204 0.19727 18 - -
22082 1.38629 1.38629 1.38629 1.38629
22083 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22084 19 3.30705 0.14631 3.36166 2.73626 19 - -
22085 1.38629 1.38629 1.38629 1.38629
22086 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22087 20 3.30705 0.14631 3.36166 2.73626 20 - -
22088 1.38629 1.38629 1.38629 1.38629
22089 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22090 21 3.30705 0.14631 3.36166 2.73626 21 - -
22091 1.38629 1.38629 1.38629 1.38629
22092 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22093 22 2.97980 2.52563 3.03204 0.19727 22 - -
22094 1.38629 1.38629 1.38629 1.38629
22095 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22096 23 2.97980 2.52563 3.03204 0.19727 23 - -
22097 1.38629 1.38629 1.38629 1.38629
22098 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22099 24 2.86982 3.47591 0.13017 3.36931 24 - -
22100 1.38629 1.38629 1.38629 1.38629
22101 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22102 25 2.86982 3.47591 0.13017 3.36931 25 - -
22103 1.38629 1.38629 1.38629 1.38629
22104 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22105 26 3.30705 0.14631 3.36166 2.73626 26 - -
22106 1.38629 1.38629 1.38629 1.38629
22107 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22108 27 2.97980 2.52563 3.03204 0.19727 27 - -
22109 1.38629 1.38629 1.38629 1.38629
22110 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22111 28 3.30705 0.14631 3.36166 2.73626 28 - -
22112 1.38629 1.38629 1.38629 1.38629
22113 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22114 29 2.86982 3.47591 0.13017 3.36931 29 - -
22115 1.38629 1.38629 1.38629 1.38629
22116 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22117 30 2.97980 2.52563 3.03204 0.19727 30 - -
22118 1.38629 1.38629 1.38629 1.38629
22119 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22120 31 2.86982 3.47591 0.13017 3.36931 31 - -
22121 1.38629 1.38629 1.38629 1.38629
22122 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22123 32 2.86982 3.47591 0.13017 3.36931 32 - -
22124 1.38629 1.38629 1.38629 1.38629
22125 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22126 33 2.86982 3.47591 0.13017 3.36931 33 - -
22127 1.38629 1.38629 1.38629 1.38629
22128 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22129 34 2.97980 2.52563 3.03204 0.19727 34 - -
22130 1.38629 1.38629 1.38629 1.38629
22131 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22132 35 3.30705 0.14631 3.36166 2.73626 35 - -
22133 1.38629 1.38629 1.38629 1.38629
22134 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22135 36 2.86982 3.47591 0.13017 3.36931 36 - -
22136 1.38629 1.38629 1.38629 1.38629
22137 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22138 37 0.15719 3.27118 2.73043 3.16274 37 - -
22139 1.38629 1.38629 1.38629 1.38629
22140 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22141 38 2.97980 2.52563 3.03204 0.19727 38 - -
22142 1.38629 1.38629 1.38629 1.38629
22143 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22144 39 2.86982 3.47591 0.13017 3.36931 39 - -
22145 1.38629 1.38629 1.38629 1.38629
22146 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22147 40 0.15719 3.27118 2.73043 3.16274 40 - -
22148 1.38629 1.38629 1.38629 1.38629
22149 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22150 41 0.15719 3.27118 2.73043 3.16274 41 - -
22151 1.38629 1.38629 1.38629 1.38629
22152 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22153 42 2.86982 3.47591 0.13017 3.36931 42 - -
22154 1.38629 1.38629 1.38629 1.38629
22155 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22156 43 0.15719 3.27118 2.73043 3.16274 43 - -
22157 1.38629 1.38629 1.38629 1.38629
22158 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22159 44 0.15719 3.27118 2.73043 3.16274 44 - -
22160 1.38629 1.38629 1.38629 1.38629
22161 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22162 45 3.30705 0.14631 3.36166 2.73626 45 - -
22163 1.38629 1.38629 1.38629 1.38629
22164 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
22165 //
22166 HMMER3/b [3.0 | March 2010]
22167 NAME 2_5.8_Metazoa_58S_start_fifteen_long
22168 LENG 45
22169 ALPH DNA
22170 RF no
22171 CS no
22172 MAP yes
22173 DATE Fri Feb 24 23:23:16 2012
22174 NSEQ 9
22175 EFFN 3.168457
22176 CKSUM 1135211888
22177 STATS LOCAL MSV -8.0522 0.71931
22178 STATS LOCAL VITERBI -7.8212 0.71931
22179 STATS LOCAL FORWARD -4.0461 0.71931
22180 HMM A C G T
22181 m->m m->i m->d i->m i->i d->m d->d
22182 COMPO 1.40316 1.39893 1.19534 1.58612
22183 1.38629 1.38629 1.38629 1.38629
22184 0.03797 3.98313 3.98313 1.46634 0.26236 0.00000 *
22185 1 3.03775 2.56273 3.08783 0.18710 1 - -
22186 1.38629 1.38629 1.38629 1.38629
22187 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22188 2 3.37463 0.13741 3.42653 2.78623 2 - -
22189 1.38629 1.38629 1.38629 1.38629
22190 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22191 3 0.14877 3.32959 2.76888 3.22651 3 - -
22192 1.38629 1.38629 1.38629 1.38629
22193 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22194 4 3.37463 0.13741 3.42653 2.78623 4 - -
22195 1.38629 1.38629 1.38629 1.38629
22196 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22197 5 0.14877 3.32959 2.76888 3.22651 5 - -
22198 1.38629 1.38629 1.38629 1.38629
22199 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22200 6 3.37463 0.13741 3.42653 2.78623 6 - -
22201 1.38629 1.38629 1.38629 1.38629
22202 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22203 7 3.37463 0.13741 3.42653 2.78623 7 - -
22204 1.38629 1.38629 1.38629 1.38629
22205 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22206 8 2.91185 3.53609 0.12297 3.43546 8 - -
22207 1.38629 1.38629 1.38629 1.38629
22208 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22209 9 3.03775 2.56273 3.08783 0.18710 9 - -
22210 1.38629 1.38629 1.38629 1.38629
22211 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22212 10 0.14877 3.32959 2.76888 3.22651 10 - -
22213 1.38629 1.38629 1.38629 1.38629
22214 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22215 11 3.37463 0.13741 3.42653 2.78623 11 - -
22216 1.38629 1.38629 1.38629 1.38629
22217 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22218 12 0.14877 3.32959 2.76888 3.22651 12 - -
22219 1.38629 1.38629 1.38629 1.38629
22220 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22221 13 2.91185 3.53609 0.12297 3.43546 13 - -
22222 1.38629 1.38629 1.38629 1.38629
22223 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22224 14 3.03775 2.56273 3.08783 0.18710 14 - -
22225 1.38629 1.38629 1.38629 1.38629
22226 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22227 15 2.91185 3.53609 0.12297 3.43546 15 - -
22228 1.38629 1.38629 1.38629 1.38629
22229 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22230 16 2.91185 3.53609 0.12297 3.43546 16 - -
22231 1.38629 1.38629 1.38629 1.38629
22232 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22233 17 0.14877 3.32959 2.76888 3.22651 17 - -
22234 1.38629 1.38629 1.38629 1.38629
22235 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22236 18 3.03775 2.56273 3.08783 0.18710 18 - -
22237 1.38629 1.38629 1.38629 1.38629
22238 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22239 19 3.37463 0.13741 3.42653 2.78623 19 - -
22240 1.38629 1.38629 1.38629 1.38629
22241 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22242 20 0.14877 3.32959 2.76888 3.22651 20 - -
22243 1.38629 1.38629 1.38629 1.38629
22244 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22245 21 3.37463 0.13741 3.42653 2.78623 21 - -
22246 1.38629 1.38629 1.38629 1.38629
22247 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22248 22 3.03775 2.56273 3.08783 0.18710 22 - -
22249 1.38629 1.38629 1.38629 1.38629
22250 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22251 23 3.03775 2.56273 3.08783 0.18710 23 - -
22252 1.38629 1.38629 1.38629 1.38629
22253 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22254 24 2.91185 3.53609 0.12297 3.43546 24 - -
22255 1.38629 1.38629 1.38629 1.38629
22256 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22257 25 2.91185 3.53609 0.12297 3.43546 25 - -
22258 1.38629 1.38629 1.38629 1.38629
22259 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22260 26 3.37463 0.13741 3.42653 2.78623 26 - -
22261 1.38629 1.38629 1.38629 1.38629
22262 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22263 27 3.03775 2.56273 3.08783 0.18710 27 - -
22264 1.38629 1.38629 1.38629 1.38629
22265 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22266 28 3.37463 0.13741 3.42653 2.78623 28 - -
22267 1.38629 1.38629 1.38629 1.38629
22268 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22269 29 2.91185 3.53609 0.12297 3.43546 29 - -
22270 1.38629 1.38629 1.38629 1.38629
22271 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22272 30 2.91185 3.53609 0.12297 3.43546 30 - -
22273 1.38629 1.38629 1.38629 1.38629
22274 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22275 31 2.91185 3.53609 0.12297 3.43546 31 - -
22276 1.38629 1.38629 1.38629 1.38629
22277 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22278 32 2.91185 3.53609 0.12297 3.43546 32 - -
22279 1.38629 1.38629 1.38629 1.38629
22280 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22281 33 2.91185 3.53609 0.12297 3.43546 33 - -
22282 1.38629 1.38629 1.38629 1.38629
22283 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22284 34 3.03775 2.56273 3.08783 0.18710 34 - -
22285 1.38629 1.38629 1.38629 1.38629
22286 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22287 35 3.37463 0.13741 3.42653 2.78623 35 - -
22288 1.38629 1.38629 1.38629 1.38629
22289 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22290 36 2.91185 3.53609 0.12297 3.43546 36 - -
22291 1.38629 1.38629 1.38629 1.38629
22292 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22293 37 0.14877 3.32959 2.76888 3.22651 37 - -
22294 1.38629 1.38629 1.38629 1.38629
22295 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22296 38 3.03775 2.56273 3.08783 0.18710 38 - -
22297 1.38629 1.38629 1.38629 1.38629
22298 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22299 39 2.91185 3.53609 0.12297 3.43546 39 - -
22300 1.38629 1.38629 1.38629 1.38629
22301 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22302 40 0.14877 3.32959 2.76888 3.22651 40 - -
22303 1.38629 1.38629 1.38629 1.38629
22304 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22305 41 0.14877 3.32959 2.76888 3.22651 41 - -
22306 1.38629 1.38629 1.38629 1.38629
22307 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22308 42 2.91185 3.53609 0.12297 3.43546 42 - -
22309 1.38629 1.38629 1.38629 1.38629
22310 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22311 43 0.14877 3.32959 2.76888 3.22651 43 - -
22312 1.38629 1.38629 1.38629 1.38629
22313 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22314 44 0.14877 3.32959 2.76888 3.22651 44 - -
22315 1.38629 1.38629 1.38629 1.38629
22316 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
22317 45 3.37463 0.13741 3.42653 2.78623 45 - -
22318 1.38629 1.38629 1.38629 1.38629
22319 0.01916 3.96432 * 1.46634 0.26236 0.00000 *
22320 //
22321 HMMER3/b [3.0 | March 2010]
22322 NAME 2_5.8_Metazoa_58S_start_fivea_long
22323 LENG 45
22324 ALPH DNA
22325 RF no
22326 CS no
22327 MAP yes
22328 DATE Fri Feb 24 23:20:34 2012
22329 NSEQ 2
22330 EFFN 2.000000
22331 CKSUM 2657386057
22332 STATS LOCAL MSV -7.6114 0.72740
22333 STATS LOCAL VITERBI -8.1839 0.72740
22334 STATS LOCAL FORWARD -3.5106 0.72740
22335 HMM A C G T
22336 m->m m->i m->d i->m i->i d->m d->d
22337 COMPO 1.52168 1.35229 1.16662 1.55311
22338 1.38629 1.38629 1.38629 1.38629
22339 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
22340 1 2.57915 2.25909 2.64442 0.28946 1 - -
22341 1.38629 1.38629 1.38629 1.38629
22342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22343 2 2.81865 0.23582 2.88868 2.35662 2 - -
22344 1.38629 1.38629 1.38629 1.38629
22345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22346 3 0.23862 2.84929 2.43386 2.70756 3 - -
22347 1.38629 1.38629 1.38629 1.38629
22348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22349 4 2.81865 0.23582 2.88868 2.35662 4 - -
22350 1.38629 1.38629 1.38629 1.38629
22351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22352 5 2.57915 2.25909 2.64442 0.28946 5 - -
22353 1.38629 1.38629 1.38629 1.38629
22354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22355 6 2.81865 0.23582 2.88868 2.35662 6 - -
22356 1.38629 1.38629 1.38629 1.38629
22357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22358 7 2.57915 2.25909 2.64442 0.28946 7 - -
22359 1.38629 1.38629 1.38629 1.38629
22360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22361 8 2.53331 3.02441 0.20344 2.88069 8 - -
22362 1.38629 1.38629 1.38629 1.38629
22363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22364 9 0.23862 2.84929 2.43386 2.70756 9 - -
22365 1.38629 1.38629 1.38629 1.38629
22366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22367 10 2.53331 3.02441 0.20344 2.88069 10 - -
22368 1.38629 1.38629 1.38629 1.38629
22369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22370 11 2.81865 0.23582 2.88868 2.35662 11 - -
22371 1.38629 1.38629 1.38629 1.38629
22372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22373 12 2.53331 3.02441 0.20344 2.88069 12 - -
22374 1.38629 1.38629 1.38629 1.38629
22375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22376 13 2.53331 3.02441 0.20344 2.88069 13 - -
22377 1.38629 1.38629 1.38629 1.38629
22378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22379 14 2.57915 2.25909 2.64442 0.28946 14 - -
22380 1.38629 1.38629 1.38629 1.38629
22381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22382 15 2.53331 3.02441 0.20344 2.88069 15 - -
22383 1.38629 1.38629 1.38629 1.38629
22384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22385 16 2.53331 3.02441 0.20344 2.88069 16 - -
22386 1.38629 1.38629 1.38629 1.38629
22387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22388 17 0.23862 2.84929 2.43386 2.70756 17 - -
22389 1.38629 1.38629 1.38629 1.38629
22390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22391 18 2.57915 2.25909 2.64442 0.28946 18 - -
22392 1.38629 1.38629 1.38629 1.38629
22393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22394 19 2.81865 0.23582 2.88868 2.35662 19 - -
22395 1.38629 1.38629 1.38629 1.38629
22396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22397 20 0.23862 2.84929 2.43386 2.70756 20 - -
22398 1.38629 1.38629 1.38629 1.38629
22399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22400 21 2.81865 0.23582 2.88868 2.35662 21 - -
22401 1.38629 1.38629 1.38629 1.38629
22402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22403 22 2.57915 2.25909 2.64442 0.28946 22 - -
22404 1.38629 1.38629 1.38629 1.38629
22405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22406 23 2.81865 0.23582 2.88868 2.35662 23 - -
22407 1.38629 1.38629 1.38629 1.38629
22408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22409 24 2.53331 3.02441 0.20344 2.88069 24 - -
22410 1.38629 1.38629 1.38629 1.38629
22411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22412 25 2.53331 3.02441 0.20344 2.88069 25 - -
22413 1.38629 1.38629 1.38629 1.38629
22414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22415 26 2.81865 0.23582 2.88868 2.35662 26 - -
22416 1.38629 1.38629 1.38629 1.38629
22417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22418 27 2.57915 2.25909 2.64442 0.28946 27 - -
22419 1.38629 1.38629 1.38629 1.38629
22420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22421 28 2.81865 0.23582 2.88868 2.35662 28 - -
22422 1.38629 1.38629 1.38629 1.38629
22423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22424 29 2.53331 3.02441 0.20344 2.88069 29 - -
22425 1.38629 1.38629 1.38629 1.38629
22426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22427 30 2.81865 0.23582 2.88868 2.35662 30 - -
22428 1.38629 1.38629 1.38629 1.38629
22429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22430 31 2.53331 3.02441 0.20344 2.88069 31 - -
22431 1.38629 1.38629 1.38629 1.38629
22432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22433 32 2.53331 3.02441 0.20344 2.88069 32 - -
22434 1.38629 1.38629 1.38629 1.38629
22435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22436 33 0.23862 2.84929 2.43386 2.70756 33 - -
22437 1.38629 1.38629 1.38629 1.38629
22438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22439 34 2.57915 2.25909 2.64442 0.28946 34 - -
22440 1.38629 1.38629 1.38629 1.38629
22441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22442 35 2.81865 0.23582 2.88868 2.35662 35 - -
22443 1.38629 1.38629 1.38629 1.38629
22444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22445 36 2.53331 3.02441 0.20344 2.88069 36 - -
22446 1.38629 1.38629 1.38629 1.38629
22447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22448 37 0.23862 2.84929 2.43386 2.70756 37 - -
22449 1.38629 1.38629 1.38629 1.38629
22450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22451 38 2.57915 2.25909 2.64442 0.28946 38 - -
22452 1.38629 1.38629 1.38629 1.38629
22453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22454 39 2.53331 3.02441 0.20344 2.88069 39 - -
22455 1.38629 1.38629 1.38629 1.38629
22456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22457 40 0.23862 2.84929 2.43386 2.70756 40 - -
22458 1.38629 1.38629 1.38629 1.38629
22459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22460 41 0.23862 2.84929 2.43386 2.70756 41 - -
22461 1.38629 1.38629 1.38629 1.38629
22462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22463 42 2.53331 3.02441 0.20344 2.88069 42 - -
22464 1.38629 1.38629 1.38629 1.38629
22465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22466 43 0.23862 2.84929 2.43386 2.70756 43 - -
22467 1.38629 1.38629 1.38629 1.38629
22468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22469 44 2.53331 3.02441 0.20344 2.88069 44 - -
22470 1.38629 1.38629 1.38629 1.38629
22471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
22472 45 2.81865 0.23582 2.88868 2.35662 45 - -
22473 1.38629 1.38629 1.38629 1.38629
22474 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
22475 //
22476 HMMER3/b [3.0 | March 2010]
22477 NAME 2_5.8_Metazoa_58S_start_fiveb_long
22478 LENG 45
22479 ALPH DNA
22480 RF no
22481 CS no
22482 MAP yes
22483 DATE Fri Feb 24 23:20:41 2012
22484 NSEQ 6
22485 EFFN 3.413086
22486 CKSUM 1109677504
22487 STATS LOCAL MSV -7.3172 0.71933
22488 STATS LOCAL VITERBI -7.5061 0.71933
22489 STATS LOCAL FORWARD -4.2818 0.71933
22490 HMM A C G T
22491 m->m m->i m->d i->m i->i d->m d->d
22492 COMPO 1.39650 1.43701 1.27755 1.44315
22493 1.38629 1.38629 1.38629 1.38629
22494 0.03628 4.02769 4.02769 1.46634 0.26236 0.00000 *
22495 1 3.11748 2.61349 3.16453 0.17409 1 - -
22496 1.38629 1.38629 1.38629 1.38629
22497 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22498 2 3.46593 0.12636 3.51399 2.85283 2 - -
22499 1.38629 1.38629 1.38629 1.38629
22500 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22501 3 0.13819 3.40877 2.82041 3.31315 3 - -
22502 1.38629 1.38629 1.38629 1.38629
22503 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22504 4 3.46593 0.12636 3.51399 2.85283 4 - -
22505 1.38629 1.38629 1.38629 1.38629
22506 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22507 5 3.11748 2.61349 3.16453 0.17409 5 - -
22508 1.38629 1.38629 1.38629 1.38629
22509 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22510 6 3.46593 0.12636 3.51399 2.85283 6 - -
22511 1.38629 1.38629 1.38629 1.38629
22512 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22513 7 3.11748 2.61349 3.16453 0.17409 7 - -
22514 1.38629 1.38629 1.38629 1.38629
22515 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22516 8 0.13819 3.40877 2.82041 3.31315 8 - -
22517 1.38629 1.38629 1.38629 1.38629
22518 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22519 9 0.13819 3.40877 2.82041 3.31315 9 - -
22520 1.38629 1.38629 1.38629 1.38629
22521 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22522 10 2.96731 3.61661 0.11405 3.52429 10 - -
22523 1.38629 1.38629 1.38629 1.38629
22524 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22525 11 3.46593 0.12636 3.51399 2.85283 11 - -
22526 1.38629 1.38629 1.38629 1.38629
22527 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22528 12 2.96731 3.61661 0.11405 3.52429 12 - -
22529 1.38629 1.38629 1.38629 1.38629
22530 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22531 13 2.96731 3.61661 0.11405 3.52429 13 - -
22532 1.38629 1.38629 1.38629 1.38629
22533 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22534 14 3.11748 2.61349 3.16453 0.17409 14 - -
22535 1.38629 1.38629 1.38629 1.38629
22536 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22537 15 2.96731 3.61661 0.11405 3.52429 15 - -
22538 1.38629 1.38629 1.38629 1.38629
22539 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22540 16 2.96731 3.61661 0.11405 3.52429 16 - -
22541 1.38629 1.38629 1.38629 1.38629
22542 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22543 17 0.13819 3.40877 2.82041 3.31315 17 - -
22544 1.38629 1.38629 1.38629 1.38629
22545 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22546 18 3.11748 2.61349 3.16453 0.17409 18 - -
22547 1.38629 1.38629 1.38629 1.38629
22548 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22549 19 3.46593 0.12636 3.51399 2.85283 19 - -
22550 1.38629 1.38629 1.38629 1.38629
22551 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22552 20 0.13819 3.40877 2.82041 3.31315 20 - -
22553 1.38629 1.38629 1.38629 1.38629
22554 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22555 21 3.46593 0.12636 3.51399 2.85283 21 - -
22556 1.38629 1.38629 1.38629 1.38629
22557 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22558 22 3.11748 2.61349 3.16453 0.17409 22 - -
22559 1.38629 1.38629 1.38629 1.38629
22560 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22561 23 2.74264 1.80999 2.80364 0.34058 23 - -
22562 1.38629 1.38629 1.38629 1.38629
22563 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22564 24 2.96731 3.61661 0.11405 3.52429 24 - -
22565 1.38629 1.38629 1.38629 1.38629
22566 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22567 25 2.96731 3.61661 0.11405 3.52429 25 - -
22568 1.38629 1.38629 1.38629 1.38629
22569 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22570 26 3.46593 0.12636 3.51399 2.85283 26 - -
22571 1.38629 1.38629 1.38629 1.38629
22572 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22573 27 3.11748 2.61349 3.16453 0.17409 27 - -
22574 1.38629 1.38629 1.38629 1.38629
22575 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22576 28 3.46593 0.12636 3.51399 2.85283 28 - -
22577 1.38629 1.38629 1.38629 1.38629
22578 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22579 29 0.13819 3.40877 2.82041 3.31315 29 - -
22580 1.38629 1.38629 1.38629 1.38629
22581 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22582 30 3.11748 2.61349 3.16453 0.17409 30 - -
22583 1.38629 1.38629 1.38629 1.38629
22584 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22585 31 2.96731 3.61661 0.11405 3.52429 31 - -
22586 1.38629 1.38629 1.38629 1.38629
22587 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22588 32 2.15655 1.42170 0.64537 2.13283 32 - -
22589 1.38629 1.38629 1.38629 1.38629
22590 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22591 33 2.96731 3.61661 0.11405 3.52429 33 - -
22592 1.38629 1.38629 1.38629 1.38629
22593 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22594 34 3.11748 2.61349 3.16453 0.17409 34 - -
22595 1.38629 1.38629 1.38629 1.38629
22596 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22597 35 3.46593 0.12636 3.51399 2.85283 35 - -
22598 1.38629 1.38629 1.38629 1.38629
22599 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22600 36 2.96731 3.61661 0.11405 3.52429 36 - -
22601 1.38629 1.38629 1.38629 1.38629
22602 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22603 37 0.13819 3.40877 2.82041 3.31315 37 - -
22604 1.38629 1.38629 1.38629 1.38629
22605 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22606 38 3.11748 2.61349 3.16453 0.17409 38 - -
22607 1.38629 1.38629 1.38629 1.38629
22608 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22609 39 2.96731 3.61661 0.11405 3.52429 39 - -
22610 1.38629 1.38629 1.38629 1.38629
22611 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22612 40 0.13819 3.40877 2.82041 3.31315 40 - -
22613 1.38629 1.38629 1.38629 1.38629
22614 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22615 41 0.13819 3.40877 2.82041 3.31315 41 - -
22616 1.38629 1.38629 1.38629 1.38629
22617 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22618 42 2.96731 3.61661 0.11405 3.52429 42 - -
22619 1.38629 1.38629 1.38629 1.38629
22620 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22621 43 0.13819 3.40877 2.82041 3.31315 43 - -
22622 1.38629 1.38629 1.38629 1.38629
22623 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22624 44 0.13819 3.40877 2.82041 3.31315 44 - -
22625 1.38629 1.38629 1.38629 1.38629
22626 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
22627 45 3.46593 0.12636 3.51399 2.85283 45 - -
22628 1.38629 1.38629 1.38629 1.38629
22629 0.01831 4.00971 * 1.46634 0.26236 0.00000 *
22630 //
22631 HMMER3/b [3.0 | March 2010]
22632 NAME 2_5.8_Metazoa_58S_start_foura_long
22633 LENG 45
22634 ALPH DNA
22635 RF no
22636 CS no
22637 MAP yes
22638 DATE Fri Feb 24 23:19:15 2012
22639 NSEQ 18
22640 EFFN 3.476074
22641 CKSUM 217135792
22642 STATS LOCAL MSV -7.4129 0.71931
22643 STATS LOCAL VITERBI -7.8161 0.71931
22644 STATS LOCAL FORWARD -4.2841 0.71931
22645 HMM A C G T
22646 m->m m->i m->d i->m i->i d->m d->d
22647 COMPO 1.37384 1.58932 1.21260 1.40496
22648 1.38629 1.38629 1.38629 1.38629
22649 0.03587 4.03884 4.03884 1.46634 0.26236 0.00000 *
22650 1 2.43287 0.95742 2.50459 0.80603 1 - -
22651 1.38629 1.38629 1.38629 1.38629
22652 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22653 2 0.13573 3.42814 2.83293 3.33438 2 - -
22654 1.38629 1.38629 1.38629 1.38629
22655 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22656 3 0.13573 3.42814 2.83293 3.33438 3 - -
22657 1.38629 1.38629 1.38629 1.38629
22658 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22659 4 0.13573 3.42814 2.83293 3.33438 4 - -
22660 1.38629 1.38629 1.38629 1.38629
22661 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22662 5 3.13720 2.62601 3.18348 0.17104 5 - -
22663 1.38629 1.38629 1.38629 1.38629
22664 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22665 6 3.48819 0.12383 3.53528 2.86892 6 - -
22666 1.38629 1.38629 1.38629 1.38629
22667 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22668 7 3.13720 2.62601 3.18348 0.17104 7 - -
22669 1.38629 1.38629 1.38629 1.38629
22670 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22671 8 3.13720 2.62601 3.18348 0.17104 8 - -
22672 1.38629 1.38629 1.38629 1.38629
22673 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22674 9 1.17399 2.60648 0.63128 2.46315 9 - -
22675 1.38629 1.38629 1.38629 1.38629
22676 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22677 10 2.98064 3.63611 0.11200 3.54585 10 - -
22678 1.38629 1.38629 1.38629 1.38629
22679 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22680 11 3.48819 0.12383 3.53528 2.86892 11 - -
22681 1.38629 1.38629 1.38629 1.38629
22682 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22683 12 2.98064 3.63611 0.11200 3.54585 12 - -
22684 1.38629 1.38629 1.38629 1.38629
22685 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22686 13 2.98064 3.63611 0.11200 3.54585 13 - -
22687 1.38629 1.38629 1.38629 1.38629
22688 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22689 14 3.13720 2.62601 3.18348 0.17104 14 - -
22690 1.38629 1.38629 1.38629 1.38629
22691 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22692 15 2.98064 3.63611 0.11200 3.54585 15 - -
22693 1.38629 1.38629 1.38629 1.38629
22694 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22695 16 2.98064 3.63611 0.11200 3.54585 16 - -
22696 1.38629 1.38629 1.38629 1.38629
22697 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22698 17 0.13573 3.42814 2.83293 3.33438 17 - -
22699 1.38629 1.38629 1.38629 1.38629
22700 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22701 18 3.13720 2.62601 3.18348 0.17104 18 - -
22702 1.38629 1.38629 1.38629 1.38629
22703 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22704 19 3.48819 0.12383 3.53528 2.86892 19 - -
22705 1.38629 1.38629 1.38629 1.38629
22706 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22707 20 0.13573 3.42814 2.83293 3.33438 20 - -
22708 1.38629 1.38629 1.38629 1.38629
22709 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22710 21 3.48819 0.12383 3.53528 2.86892 21 - -
22711 1.38629 1.38629 1.38629 1.38629
22712 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22713 22 3.13720 2.62601 3.18348 0.17104 22 - -
22714 1.38629 1.38629 1.38629 1.38629
22715 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22716 23 3.48819 0.12383 3.53528 2.86892 23 - -
22717 1.38629 1.38629 1.38629 1.38629
22718 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22719 24 2.98064 3.63611 0.11200 3.54585 24 - -
22720 1.38629 1.38629 1.38629 1.38629
22721 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22722 25 2.98064 3.63611 0.11200 3.54585 25 - -
22723 1.38629 1.38629 1.38629 1.38629
22724 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22725 26 3.13720 2.62601 3.18348 0.17104 26 - -
22726 1.38629 1.38629 1.38629 1.38629
22727 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22728 27 3.13720 2.62601 3.18348 0.17104 27 - -
22729 1.38629 1.38629 1.38629 1.38629
22730 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22731 28 3.48819 0.12383 3.53528 2.86892 28 - -
22732 1.38629 1.38629 1.38629 1.38629
22733 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22734 29 2.98064 3.63611 0.11200 3.54585 29 - -
22735 1.38629 1.38629 1.38629 1.38629
22736 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22737 30 3.13720 2.62601 3.18348 0.17104 30 - -
22738 1.38629 1.38629 1.38629 1.38629
22739 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22740 31 2.98064 3.63611 0.11200 3.54585 31 - -
22741 1.38629 1.38629 1.38629 1.38629
22742 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22743 32 2.98064 3.63611 0.11200 3.54585 32 - -
22744 1.38629 1.38629 1.38629 1.38629
22745 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22746 33 0.13573 3.42814 2.83293 3.33438 33 - -
22747 1.38629 1.38629 1.38629 1.38629
22748 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22749 34 3.13720 2.62601 3.18348 0.17104 34 - -
22750 1.38629 1.38629 1.38629 1.38629
22751 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22752 35 3.48819 0.12383 3.53528 2.86892 35 - -
22753 1.38629 1.38629 1.38629 1.38629
22754 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22755 36 2.98064 3.63611 0.11200 3.54585 36 - -
22756 1.38629 1.38629 1.38629 1.38629
22757 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22758 37 0.13573 3.42814 2.83293 3.33438 37 - -
22759 1.38629 1.38629 1.38629 1.38629
22760 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22761 38 3.13720 2.62601 3.18348 0.17104 38 - -
22762 1.38629 1.38629 1.38629 1.38629
22763 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22764 39 2.98064 3.63611 0.11200 3.54585 39 - -
22765 1.38629 1.38629 1.38629 1.38629
22766 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22767 40 0.13573 3.42814 2.83293 3.33438 40 - -
22768 1.38629 1.38629 1.38629 1.38629
22769 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22770 41 0.13573 3.42814 2.83293 3.33438 41 - -
22771 1.38629 1.38629 1.38629 1.38629
22772 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22773 42 2.98064 3.63611 0.11200 3.54585 42 - -
22774 1.38629 1.38629 1.38629 1.38629
22775 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22776 43 0.13573 3.42814 2.83293 3.33438 43 - -
22777 1.38629 1.38629 1.38629 1.38629
22778 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22779 44 0.13573 3.42814 2.83293 3.33438 44 - -
22780 1.38629 1.38629 1.38629 1.38629
22781 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547
22782 45 3.48819 0.12383 3.53528 2.86892 45 - -
22783 1.38629 1.38629 1.38629 1.38629
22784 0.01810 4.02107 * 1.46634 0.26236 0.00000 *
22785 //
22786 HMMER3/b [3.0 | March 2010]
22787 NAME 2_5.8_Metazoa_58S_start_fourb_long
22788 LENG 45
22789 ALPH DNA
22790 RF no
22791 CS no
22792 MAP yes
22793 DATE Fri Feb 24 23:19:21 2012
22794 NSEQ 21
22795 EFFN 3.811890
22796 CKSUM 3684173544
22797 STATS LOCAL MSV -7.2077 0.71932
22798 STATS LOCAL VITERBI -7.7384 0.71932
22799 STATS LOCAL FORWARD -4.3623 0.71932
22800 HMM A C G T
22801 m->m m->i m->d i->m i->i d->m d->d
22802 COMPO 1.40447 1.49377 1.24618 1.41726
22803 1.38629 1.38629 1.38629 1.38629
22804 0.03383 4.09632 4.09632 1.46634 0.26236 0.00000 *
22805 1 1.19857 2.20788 2.27181 0.72295 1 - -
22806 1.38629 1.38629 1.38629 1.38629
22807 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22808 2 0.95279 1.38377 2.07939 1.43256 2 - -
22809 1.38629 1.38629 1.38629 1.38629
22810 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22811 3 0.12420 3.52484 2.89516 3.44053 3 - -
22812 1.38629 1.38629 1.38629 1.38629
22813 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22814 4 3.59878 0.11207 3.64093 2.94815 4 - -
22815 1.38629 1.38629 1.38629 1.38629
22816 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22817 5 3.23702 2.68930 3.27941 0.15649 5 - -
22818 1.38629 1.38629 1.38629 1.38629
22819 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22820 6 3.59878 0.11207 3.64093 2.94815 6 - -
22821 1.38629 1.38629 1.38629 1.38629
22822 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22823 7 3.23702 2.68930 3.27941 0.15649 7 - -
22824 1.38629 1.38629 1.38629 1.38629
22825 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22826 8 2.17429 2.46440 2.76572 0.30338 8 - -
22827 1.38629 1.38629 1.38629 1.38629
22828 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22829 9 0.12420 3.52484 2.89516 3.44053 9 - -
22830 1.38629 1.38629 1.38629 1.38629
22831 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22832 10 3.04591 3.73233 0.10249 3.65247 10 - -
22833 1.38629 1.38629 1.38629 1.38629
22834 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22835 11 3.59878 0.11207 3.64093 2.94815 11 - -
22836 1.38629 1.38629 1.38629 1.38629
22837 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22838 12 3.04591 3.73233 0.10249 3.65247 12 - -
22839 1.38629 1.38629 1.38629 1.38629
22840 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22841 13 3.04591 3.73233 0.10249 3.65247 13 - -
22842 1.38629 1.38629 1.38629 1.38629
22843 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22844 14 3.23702 2.68930 3.27941 0.15649 14 - -
22845 1.38629 1.38629 1.38629 1.38629
22846 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22847 15 3.04591 3.73233 0.10249 3.65247 15 - -
22848 1.38629 1.38629 1.38629 1.38629
22849 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22850 16 3.04591 3.73233 0.10249 3.65247 16 - -
22851 1.38629 1.38629 1.38629 1.38629
22852 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22853 17 0.12420 3.52484 2.89516 3.44053 17 - -
22854 1.38629 1.38629 1.38629 1.38629
22855 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22856 18 3.23702 2.68930 3.27941 0.15649 18 - -
22857 1.38629 1.38629 1.38629 1.38629
22858 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22859 19 3.59878 0.11207 3.64093 2.94815 19 - -
22860 1.38629 1.38629 1.38629 1.38629
22861 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22862 20 0.12420 3.52484 2.89516 3.44053 20 - -
22863 1.38629 1.38629 1.38629 1.38629
22864 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22865 21 3.59878 0.11207 3.64093 2.94815 21 - -
22866 1.38629 1.38629 1.38629 1.38629
22867 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22868 22 3.23702 2.68930 3.27941 0.15649 22 - -
22869 1.38629 1.38629 1.38629 1.38629
22870 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22871 23 2.55962 1.24157 2.62790 0.57713 23 - -
22872 1.38629 1.38629 1.38629 1.38629
22873 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22874 24 3.04591 3.73233 0.10249 3.65247 24 - -
22875 1.38629 1.38629 1.38629 1.38629
22876 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22877 25 3.04591 3.73233 0.10249 3.65247 25 - -
22878 1.38629 1.38629 1.38629 1.38629
22879 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22880 26 3.59878 0.11207 3.64093 2.94815 26 - -
22881 1.38629 1.38629 1.38629 1.38629
22882 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22883 27 3.23702 2.68930 3.27941 0.15649 27 - -
22884 1.38629 1.38629 1.38629 1.38629
22885 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22886 28 3.59878 0.11207 3.64093 2.94815 28 - -
22887 1.38629 1.38629 1.38629 1.38629
22888 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22889 29 1.94837 3.11578 0.27045 2.99346 29 - -
22890 1.38629 1.38629 1.38629 1.38629
22891 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22892 30 3.23702 2.68930 3.27941 0.15649 30 - -
22893 1.38629 1.38629 1.38629 1.38629
22894 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22895 31 3.04591 3.73233 0.10249 3.65247 31 - -
22896 1.38629 1.38629 1.38629 1.38629
22897 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22898 32 3.04591 3.73233 0.10249 3.65247 32 - -
22899 1.38629 1.38629 1.38629 1.38629
22900 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22901 33 0.12420 3.52484 2.89516 3.44053 33 - -
22902 1.38629 1.38629 1.38629 1.38629
22903 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22904 34 3.23702 2.68930 3.27941 0.15649 34 - -
22905 1.38629 1.38629 1.38629 1.38629
22906 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22907 35 3.59878 0.11207 3.64093 2.94815 35 - -
22908 1.38629 1.38629 1.38629 1.38629
22909 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22910 36 3.04591 3.73233 0.10249 3.65247 36 - -
22911 1.38629 1.38629 1.38629 1.38629
22912 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22913 37 0.12420 3.52484 2.89516 3.44053 37 - -
22914 1.38629 1.38629 1.38629 1.38629
22915 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22916 38 3.23702 2.68930 3.27941 0.15649 38 - -
22917 1.38629 1.38629 1.38629 1.38629
22918 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22919 39 3.04591 3.73233 0.10249 3.65247 39 - -
22920 1.38629 1.38629 1.38629 1.38629
22921 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22922 40 0.12420 3.52484 2.89516 3.44053 40 - -
22923 1.38629 1.38629 1.38629 1.38629
22924 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22925 41 0.12420 3.52484 2.89516 3.44053 41 - -
22926 1.38629 1.38629 1.38629 1.38629
22927 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22928 42 3.04591 3.73233 0.10249 3.65247 42 - -
22929 1.38629 1.38629 1.38629 1.38629
22930 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22931 43 0.12420 3.52484 2.89516 3.44053 43 - -
22932 1.38629 1.38629 1.38629 1.38629
22933 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22934 44 0.12420 3.52484 2.89516 3.44053 44 - -
22935 1.38629 1.38629 1.38629 1.38629
22936 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547
22937 45 3.59878 0.11207 3.64093 2.94815 45 - -
22938 1.38629 1.38629 1.38629 1.38629
22939 0.01706 4.07955 * 1.46634 0.26236 0.00000 *
22940 //
22941 HMMER3/b [3.0 | March 2010]
22942 NAME 2_5.8_Metazoa_58S_start_fourc_long
22943 LENG 45
22944 ALPH DNA
22945 RF no
22946 CS no
22947 MAP yes
22948 DATE Fri Feb 24 23:19:25 2012
22949 NSEQ 3
22950 EFFN 3.000000
22951 CKSUM 485987772
22952 STATS LOCAL MSV -7.9007 0.72085
22953 STATS LOCAL VITERBI -7.9323 0.72085
22954 STATS LOCAL FORWARD -4.0009 0.72085
22955 HMM A C G T
22956 m->m m->i m->d i->m i->i d->m d->d
22957 COMPO 1.31900 1.60612 1.33370 1.31516
22958 1.38629 1.38629 1.38629 1.38629
22959 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
22960 1 3.30705 0.14631 3.36166 2.73626 1 - -
22961 1.38629 1.38629 1.38629 1.38629
22962 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22963 2 0.15719 3.27118 2.73043 3.16274 2 - -
22964 1.38629 1.38629 1.38629 1.38629
22965 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22966 3 0.15719 3.27118 2.73043 3.16274 3 - -
22967 1.38629 1.38629 1.38629 1.38629
22968 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22969 4 2.86982 3.47591 0.13017 3.36931 4 - -
22970 1.38629 1.38629 1.38629 1.38629
22971 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22972 5 2.97980 2.52563 3.03204 0.19727 5 - -
22973 1.38629 1.38629 1.38629 1.38629
22974 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22975 6 3.30705 0.14631 3.36166 2.73626 6 - -
22976 1.38629 1.38629 1.38629 1.38629
22977 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22978 7 2.97980 2.52563 3.03204 0.19727 7 - -
22979 1.38629 1.38629 1.38629 1.38629
22980 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22981 8 2.97980 2.52563 3.03204 0.19727 8 - -
22982 1.38629 1.38629 1.38629 1.38629
22983 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22984 9 1.34853 2.58976 0.54705 2.44542 9 - -
22985 1.38629 1.38629 1.38629 1.38629
22986 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22987 10 2.97980 2.52563 3.03204 0.19727 10 - -
22988 1.38629 1.38629 1.38629 1.38629
22989 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22990 11 3.30705 0.14631 3.36166 2.73626 11 - -
22991 1.38629 1.38629 1.38629 1.38629
22992 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22993 12 2.86982 3.47591 0.13017 3.36931 12 - -
22994 1.38629 1.38629 1.38629 1.38629
22995 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22996 13 2.86982 3.47591 0.13017 3.36931 13 - -
22997 1.38629 1.38629 1.38629 1.38629
22998 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22999 14 2.97980 2.52563 3.03204 0.19727 14 - -
23000 1.38629 1.38629 1.38629 1.38629
23001 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23002 15 2.86982 3.47591 0.13017 3.36931 15 - -
23003 1.38629 1.38629 1.38629 1.38629
23004 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23005 16 2.86982 3.47591 0.13017 3.36931 16 - -
23006 1.38629 1.38629 1.38629 1.38629
23007 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23008 17 0.15719 3.27118 2.73043 3.16274 17 - -
23009 1.38629 1.38629 1.38629 1.38629
23010 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23011 18 2.97980 2.52563 3.03204 0.19727 18 - -
23012 1.38629 1.38629 1.38629 1.38629
23013 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23014 19 3.30705 0.14631 3.36166 2.73626 19 - -
23015 1.38629 1.38629 1.38629 1.38629
23016 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23017 20 0.15719 3.27118 2.73043 3.16274 20 - -
23018 1.38629 1.38629 1.38629 1.38629
23019 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23020 21 3.30705 0.14631 3.36166 2.73626 21 - -
23021 1.38629 1.38629 1.38629 1.38629
23022 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23023 22 2.97980 2.52563 3.03204 0.19727 22 - -
23024 1.38629 1.38629 1.38629 1.38629
23025 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23026 23 2.97980 2.52563 3.03204 0.19727 23 - -
23027 1.38629 1.38629 1.38629 1.38629
23028 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23029 24 2.86982 3.47591 0.13017 3.36931 24 - -
23030 1.38629 1.38629 1.38629 1.38629
23031 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23032 25 2.86982 3.47591 0.13017 3.36931 25 - -
23033 1.38629 1.38629 1.38629 1.38629
23034 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23035 26 2.97980 2.52563 3.03204 0.19727 26 - -
23036 1.38629 1.38629 1.38629 1.38629
23037 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23038 27 2.97980 2.52563 3.03204 0.19727 27 - -
23039 1.38629 1.38629 1.38629 1.38629
23040 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23041 28 3.30705 0.14631 3.36166 2.73626 28 - -
23042 1.38629 1.38629 1.38629 1.38629
23043 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23044 29 2.86982 3.47591 0.13017 3.36931 29 - -
23045 1.38629 1.38629 1.38629 1.38629
23046 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23047 30 2.97980 2.52563 3.03204 0.19727 30 - -
23048 1.38629 1.38629 1.38629 1.38629
23049 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23050 31 0.15719 3.27118 2.73043 3.16274 31 - -
23051 1.38629 1.38629 1.38629 1.38629
23052 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23053 32 2.86982 3.47591 0.13017 3.36931 32 - -
23054 1.38629 1.38629 1.38629 1.38629
23055 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23056 33 0.15719 3.27118 2.73043 3.16274 33 - -
23057 1.38629 1.38629 1.38629 1.38629
23058 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23059 34 2.97980 2.52563 3.03204 0.19727 34 - -
23060 1.38629 1.38629 1.38629 1.38629
23061 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23062 35 3.30705 0.14631 3.36166 2.73626 35 - -
23063 1.38629 1.38629 1.38629 1.38629
23064 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23065 36 2.86982 3.47591 0.13017 3.36931 36 - -
23066 1.38629 1.38629 1.38629 1.38629
23067 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23068 37 0.15719 3.27118 2.73043 3.16274 37 - -
23069 1.38629 1.38629 1.38629 1.38629
23070 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23071 38 2.97980 2.52563 3.03204 0.19727 38 - -
23072 1.38629 1.38629 1.38629 1.38629
23073 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23074 39 2.86982 3.47591 0.13017 3.36931 39 - -
23075 1.38629 1.38629 1.38629 1.38629
23076 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23077 40 0.15719 3.27118 2.73043 3.16274 40 - -
23078 1.38629 1.38629 1.38629 1.38629
23079 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23080 41 0.15719 3.27118 2.73043 3.16274 41 - -
23081 1.38629 1.38629 1.38629 1.38629
23082 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23083 42 0.15719 3.27118 2.73043 3.16274 42 - -
23084 1.38629 1.38629 1.38629 1.38629
23085 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23086 43 0.15719 3.27118 2.73043 3.16274 43 - -
23087 1.38629 1.38629 1.38629 1.38629
23088 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23089 44 0.15719 3.27118 2.73043 3.16274 44 - -
23090 1.38629 1.38629 1.38629 1.38629
23091 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23092 45 3.30705 0.14631 3.36166 2.73626 45 - -
23093 1.38629 1.38629 1.38629 1.38629
23094 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
23095 //
23096 HMMER3/b [3.0 | March 2010]
23097 NAME 2_5.8_Metazoa_58S_start_fourd_long
23098 LENG 45
23099 ALPH DNA
23100 RF no
23101 CS no
23102 MAP yes
23103 DATE Fri Feb 24 23:19:37 2012
23104 NSEQ 62
23105 EFFN 3.515503
23106 CKSUM 970865132
23107 STATS LOCAL MSV -7.4111 0.71932
23108 STATS LOCAL VITERBI -7.8849 0.71932
23109 STATS LOCAL FORWARD -4.2467 0.71932
23110 HMM A C G T
23111 m->m m->i m->d i->m i->i d->m d->d
23112 COMPO 1.34248 1.52639 1.35353 1.33501
23113 1.38629 1.38629 1.38629 1.38629
23114 0.03562 4.04577 4.04577 1.46634 0.26236 0.00000 *
23115 1 3.50187 0.12230 3.54836 2.87879 1 - -
23116 1.38629 1.38629 1.38629 1.38629
23117 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23118 2 0.13425 3.44005 2.84062 3.34744 2 - -
23119 1.38629 1.38629 1.38629 1.38629
23120 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23121 3 0.13425 3.44005 2.84062 3.34744 3 - -
23122 1.38629 1.38629 1.38629 1.38629
23123 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23124 4 2.98879 3.64807 0.11077 3.55908 4 - -
23125 1.38629 1.38629 1.38629 1.38629
23126 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23127 5 3.14938 2.63373 3.19519 0.16919 5 - -
23128 1.38629 1.38629 1.38629 1.38629
23129 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23130 6 3.50187 0.12230 3.54836 2.87879 6 - -
23131 1.38629 1.38629 1.38629 1.38629
23132 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23133 7 3.14938 2.63373 3.19519 0.16919 7 - -
23134 1.38629 1.38629 1.38629 1.38629
23135 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23136 8 3.14938 2.63373 3.19519 0.16919 8 - -
23137 1.38629 1.38629 1.38629 1.38629
23138 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23139 9 0.33003 2.89879 1.81100 2.77229 9 - -
23140 1.38629 1.38629 1.38629 1.38629
23141 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23142 10 3.14938 2.63373 3.19519 0.16919 10 - -
23143 1.38629 1.38629 1.38629 1.38629
23144 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23145 11 3.50187 0.12230 3.54836 2.87879 11 - -
23146 1.38629 1.38629 1.38629 1.38629
23147 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23148 12 2.98879 3.64807 0.11077 3.55908 12 - -
23149 1.38629 1.38629 1.38629 1.38629
23150 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23151 13 2.98879 3.64807 0.11077 3.55908 13 - -
23152 1.38629 1.38629 1.38629 1.38629
23153 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23154 14 3.14938 2.63373 3.19519 0.16919 14 - -
23155 1.38629 1.38629 1.38629 1.38629
23156 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23157 15 2.98879 3.64807 0.11077 3.55908 15 - -
23158 1.38629 1.38629 1.38629 1.38629
23159 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23160 16 2.98879 3.64807 0.11077 3.55908 16 - -
23161 1.38629 1.38629 1.38629 1.38629
23162 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23163 17 0.13425 3.44005 2.84062 3.34744 17 - -
23164 1.38629 1.38629 1.38629 1.38629
23165 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23166 18 3.14938 2.63373 3.19519 0.16919 18 - -
23167 1.38629 1.38629 1.38629 1.38629
23168 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23169 19 3.50187 0.12230 3.54836 2.87879 19 - -
23170 1.38629 1.38629 1.38629 1.38629
23171 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23172 20 0.13425 3.44005 2.84062 3.34744 20 - -
23173 1.38629 1.38629 1.38629 1.38629
23174 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23175 21 3.50187 0.12230 3.54836 2.87879 21 - -
23176 1.38629 1.38629 1.38629 1.38629
23177 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23178 22 3.14938 2.63373 3.19519 0.16919 22 - -
23179 1.38629 1.38629 1.38629 1.38629
23180 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23181 23 3.50187 0.12230 3.54836 2.87879 23 - -
23182 1.38629 1.38629 1.38629 1.38629
23183 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23184 24 2.98879 3.64807 0.11077 3.55908 24 - -
23185 1.38629 1.38629 1.38629 1.38629
23186 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23187 25 2.98879 3.64807 0.11077 3.55908 25 - -
23188 1.38629 1.38629 1.38629 1.38629
23189 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23190 26 3.14938 2.63373 3.19519 0.16919 26 - -
23191 1.38629 1.38629 1.38629 1.38629
23192 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23193 27 3.14938 2.63373 3.19519 0.16919 27 - -
23194 1.38629 1.38629 1.38629 1.38629
23195 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23196 28 3.50187 0.12230 3.54836 2.87879 28 - -
23197 1.38629 1.38629 1.38629 1.38629
23198 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23199 29 2.98879 3.64807 0.11077 3.55908 29 - -
23200 1.38629 1.38629 1.38629 1.38629
23201 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23202 30 3.14938 2.63373 3.19519 0.16919 30 - -
23203 1.38629 1.38629 1.38629 1.38629
23204 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23205 31 0.13425 3.44005 2.84062 3.34744 31 - -
23206 1.38629 1.38629 1.38629 1.38629
23207 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23208 32 2.98879 3.64807 0.11077 3.55908 32 - -
23209 1.38629 1.38629 1.38629 1.38629
23210 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23211 33 1.83933 2.10339 1.47710 0.71185 33 - -
23212 1.38629 1.38629 1.38629 1.38629
23213 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23214 34 3.14938 2.63373 3.19519 0.16919 34 - -
23215 1.38629 1.38629 1.38629 1.38629
23216 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23217 35 3.50187 0.12230 3.54836 2.87879 35 - -
23218 1.38629 1.38629 1.38629 1.38629
23219 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23220 36 2.98879 3.64807 0.11077 3.55908 36 - -
23221 1.38629 1.38629 1.38629 1.38629
23222 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23223 37 0.13425 3.44005 2.84062 3.34744 37 - -
23224 1.38629 1.38629 1.38629 1.38629
23225 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23226 38 3.14938 2.63373 3.19519 0.16919 38 - -
23227 1.38629 1.38629 1.38629 1.38629
23228 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23229 39 2.98879 3.64807 0.11077 3.55908 39 - -
23230 1.38629 1.38629 1.38629 1.38629
23231 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23232 40 0.13425 3.44005 2.84062 3.34744 40 - -
23233 1.38629 1.38629 1.38629 1.38629
23234 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23235 41 0.13425 3.44005 2.84062 3.34744 41 - -
23236 1.38629 1.38629 1.38629 1.38629
23237 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23238 42 0.19556 3.22260 2.37017 3.11653 42 - -
23239 1.38629 1.38629 1.38629 1.38629
23240 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23241 43 0.13425 3.44005 2.84062 3.34744 43 - -
23242 1.38629 1.38629 1.38629 1.38629
23243 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23244 44 0.13425 3.44005 2.84062 3.34744 44 - -
23245 1.38629 1.38629 1.38629 1.38629
23246 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547
23247 45 3.50187 0.12230 3.54836 2.87879 45 - -
23248 1.38629 1.38629 1.38629 1.38629
23249 0.01797 4.02812 * 1.46634 0.26236 0.00000 *
23250 //
23251 HMMER3/b [3.0 | March 2010]
23252 NAME 2_5.8_Metazoa_58S_start_foure_long
23253 LENG 45
23254 ALPH DNA
23255 RF no
23256 CS no
23257 MAP yes
23258 DATE Fri Feb 24 23:19:42 2012
23259 NSEQ 2
23260 EFFN 2.000000
23261 CKSUM 2649644998
23262 STATS LOCAL MSV -7.3985 0.72830
23263 STATS LOCAL VITERBI -8.4341 0.72830
23264 STATS LOCAL FORWARD -3.3435 0.72830
23265 HMM A C G T
23266 m->m m->i m->d i->m i->i d->m d->d
23267 COMPO 1.23428 1.58647 1.42785 1.32997
23268 1.38629 1.38629 1.38629 1.38629
23269 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
23270 1 2.81865 0.23582 2.88868 2.35662 1 - -
23271 1.38629 1.38629 1.38629 1.38629
23272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23273 2 0.23862 2.84929 2.43386 2.70756 2 - -
23274 1.38629 1.38629 1.38629 1.38629
23275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23276 3 0.23862 2.84929 2.43386 2.70756 3 - -
23277 1.38629 1.38629 1.38629 1.38629
23278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23279 4 2.53331 3.02441 0.20344 2.88069 4 - -
23280 1.38629 1.38629 1.38629 1.38629
23281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23282 5 2.57915 2.25909 2.64442 0.28946 5 - -
23283 1.38629 1.38629 1.38629 1.38629
23284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23285 6 2.81865 0.23582 2.88868 2.35662 6 - -
23286 1.38629 1.38629 1.38629 1.38629
23287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23288 7 2.57915 2.25909 2.64442 0.28946 7 - -
23289 1.38629 1.38629 1.38629 1.38629
23290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23291 8 2.57915 2.25909 2.64442 0.28946 8 - -
23292 1.38629 1.38629 1.38629 1.38629
23293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23294 9 0.23862 2.84929 2.43386 2.70756 9 - -
23295 1.38629 1.38629 1.38629 1.38629
23296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23297 10 2.57915 2.25909 2.64442 0.28946 10 - -
23298 1.38629 1.38629 1.38629 1.38629
23299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23300 11 2.81865 0.23582 2.88868 2.35662 11 - -
23301 1.38629 1.38629 1.38629 1.38629
23302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23303 12 0.23862 2.84929 2.43386 2.70756 12 - -
23304 1.38629 1.38629 1.38629 1.38629
23305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23306 13 2.53331 3.02441 0.20344 2.88069 13 - -
23307 1.38629 1.38629 1.38629 1.38629
23308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23309 14 2.57915 2.25909 2.64442 0.28946 14 - -
23310 1.38629 1.38629 1.38629 1.38629
23311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23312 15 2.53331 3.02441 0.20344 2.88069 15 - -
23313 1.38629 1.38629 1.38629 1.38629
23314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23315 16 2.53331 3.02441 0.20344 2.88069 16 - -
23316 1.38629 1.38629 1.38629 1.38629
23317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23318 17 0.23862 2.84929 2.43386 2.70756 17 - -
23319 1.38629 1.38629 1.38629 1.38629
23320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23321 18 2.57915 2.25909 2.64442 0.28946 18 - -
23322 1.38629 1.38629 1.38629 1.38629
23323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23324 19 2.81865 0.23582 2.88868 2.35662 19 - -
23325 1.38629 1.38629 1.38629 1.38629
23326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23327 20 0.23862 2.84929 2.43386 2.70756 20 - -
23328 1.38629 1.38629 1.38629 1.38629
23329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23330 21 2.81865 0.23582 2.88868 2.35662 21 - -
23331 1.38629 1.38629 1.38629 1.38629
23332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23333 22 2.57915 2.25909 2.64442 0.28946 22 - -
23334 1.38629 1.38629 1.38629 1.38629
23335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23336 23 2.57915 2.25909 2.64442 0.28946 23 - -
23337 1.38629 1.38629 1.38629 1.38629
23338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23339 24 2.53331 3.02441 0.20344 2.88069 24 - -
23340 1.38629 1.38629 1.38629 1.38629
23341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23342 25 2.53331 3.02441 0.20344 2.88069 25 - -
23343 1.38629 1.38629 1.38629 1.38629
23344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23345 26 2.57915 2.25909 2.64442 0.28946 26 - -
23346 1.38629 1.38629 1.38629 1.38629
23347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23348 27 2.57915 2.25909 2.64442 0.28946 27 - -
23349 1.38629 1.38629 1.38629 1.38629
23350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23351 28 2.81865 0.23582 2.88868 2.35662 28 - -
23352 1.38629 1.38629 1.38629 1.38629
23353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23354 29 2.53331 3.02441 0.20344 2.88069 29 - -
23355 1.38629 1.38629 1.38629 1.38629
23356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23357 30 2.57915 2.25909 2.64442 0.28946 30 - -
23358 1.38629 1.38629 1.38629 1.38629
23359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23360 31 0.23862 2.84929 2.43386 2.70756 31 - -
23361 1.38629 1.38629 1.38629 1.38629
23362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23363 32 2.53331 3.02441 0.20344 2.88069 32 - -
23364 1.38629 1.38629 1.38629 1.38629
23365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23366 33 0.23862 2.84929 2.43386 2.70756 33 - -
23367 1.38629 1.38629 1.38629 1.38629
23368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23369 34 2.57915 2.25909 2.64442 0.28946 34 - -
23370 1.38629 1.38629 1.38629 1.38629
23371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23372 35 2.81865 0.23582 2.88868 2.35662 35 - -
23373 1.38629 1.38629 1.38629 1.38629
23374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23375 36 2.53331 3.02441 0.20344 2.88069 36 - -
23376 1.38629 1.38629 1.38629 1.38629
23377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23378 37 0.23862 2.84929 2.43386 2.70756 37 - -
23379 1.38629 1.38629 1.38629 1.38629
23380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23381 38 2.57915 2.25909 2.64442 0.28946 38 - -
23382 1.38629 1.38629 1.38629 1.38629
23383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23384 39 2.53331 3.02441 0.20344 2.88069 39 - -
23385 1.38629 1.38629 1.38629 1.38629
23386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23387 40 0.23862 2.84929 2.43386 2.70756 40 - -
23388 1.38629 1.38629 1.38629 1.38629
23389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23390 41 0.23862 2.84929 2.43386 2.70756 41 - -
23391 1.38629 1.38629 1.38629 1.38629
23392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23393 42 0.23862 2.84929 2.43386 2.70756 42 - -
23394 1.38629 1.38629 1.38629 1.38629
23395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23396 43 0.23862 2.84929 2.43386 2.70756 43 - -
23397 1.38629 1.38629 1.38629 1.38629
23398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23399 44 0.23862 2.84929 2.43386 2.70756 44 - -
23400 1.38629 1.38629 1.38629 1.38629
23401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
23402 45 2.81865 0.23582 2.88868 2.35662 45 - -
23403 1.38629 1.38629 1.38629 1.38629
23404 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
23405 //
23406 HMMER3/b [3.0 | March 2010]
23407 NAME 2_5.8_Metazoa_58S_start_fourf_long
23408 LENG 45
23409 ALPH DNA
23410 RF no
23411 CS no
23412 MAP yes
23413 DATE Fri Feb 24 23:19:47 2012
23414 NSEQ 3
23415 EFFN 3.000000
23416 CKSUM 1198425551
23417 STATS LOCAL MSV -8.1155 0.72049
23418 STATS LOCAL VITERBI -8.0778 0.72049
23419 STATS LOCAL FORWARD -4.1553 0.72049
23420 HMM A C G T
23421 m->m m->i m->d i->m i->i d->m d->d
23422 COMPO 1.46416 1.79106 1.19266 1.20888
23423 1.38629 1.38629 1.38629 1.38629
23424 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
23425 1 2.97980 2.52563 3.03204 0.19727 1 - -
23426 1.38629 1.38629 1.38629 1.38629
23427 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23428 2 0.15719 3.27118 2.73043 3.16274 2 - -
23429 1.38629 1.38629 1.38629 1.38629
23430 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23431 3 0.15719 3.27118 2.73043 3.16274 3 - -
23432 1.38629 1.38629 1.38629 1.38629
23433 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23434 4 2.86982 3.47591 0.13017 3.36931 4 - -
23435 1.38629 1.38629 1.38629 1.38629
23436 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23437 5 2.97980 2.52563 3.03204 0.19727 5 - -
23438 1.38629 1.38629 1.38629 1.38629
23439 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23440 6 2.97980 2.52563 3.03204 0.19727 6 - -
23441 1.38629 1.38629 1.38629 1.38629
23442 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23443 7 2.86982 3.47591 0.13017 3.36931 7 - -
23444 1.38629 1.38629 1.38629 1.38629
23445 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23446 8 2.97980 2.52563 3.03204 0.19727 8 - -
23447 1.38629 1.38629 1.38629 1.38629
23448 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23449 9 0.15719 3.27118 2.73043 3.16274 9 - -
23450 1.38629 1.38629 1.38629 1.38629
23451 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23452 10 2.97980 2.52563 3.03204 0.19727 10 - -
23453 1.38629 1.38629 1.38629 1.38629
23454 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23455 11 3.30705 0.14631 3.36166 2.73626 11 - -
23456 1.38629 1.38629 1.38629 1.38629
23457 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23458 12 2.86982 3.47591 0.13017 3.36931 12 - -
23459 1.38629 1.38629 1.38629 1.38629
23460 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23461 13 0.15719 3.27118 2.73043 3.16274 13 - -
23462 1.38629 1.38629 1.38629 1.38629
23463 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23464 14 2.97980 2.52563 3.03204 0.19727 14 - -
23465 1.38629 1.38629 1.38629 1.38629
23466 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23467 15 2.86982 3.47591 0.13017 3.36931 15 - -
23468 1.38629 1.38629 1.38629 1.38629
23469 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23470 16 2.86982 3.47591 0.13017 3.36931 16 - -
23471 1.38629 1.38629 1.38629 1.38629
23472 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23473 17 0.15719 3.27118 2.73043 3.16274 17 - -
23474 1.38629 1.38629 1.38629 1.38629
23475 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23476 18 2.97980 2.52563 3.03204 0.19727 18 - -
23477 1.38629 1.38629 1.38629 1.38629
23478 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23479 19 3.30705 0.14631 3.36166 2.73626 19 - -
23480 1.38629 1.38629 1.38629 1.38629
23481 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23482 20 0.15719 3.27118 2.73043 3.16274 20 - -
23483 1.38629 1.38629 1.38629 1.38629
23484 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23485 21 3.30705 0.14631 3.36166 2.73626 21 - -
23486 1.38629 1.38629 1.38629 1.38629
23487 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23488 22 2.97980 2.52563 3.03204 0.19727 22 - -
23489 1.38629 1.38629 1.38629 1.38629
23490 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23491 23 2.97980 2.52563 3.03204 0.19727 23 - -
23492 1.38629 1.38629 1.38629 1.38629
23493 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23494 24 2.86982 3.47591 0.13017 3.36931 24 - -
23495 1.38629 1.38629 1.38629 1.38629
23496 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23497 25 2.86982 3.47591 0.13017 3.36931 25 - -
23498 1.38629 1.38629 1.38629 1.38629
23499 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23500 26 2.97980 2.52563 3.03204 0.19727 26 - -
23501 1.38629 1.38629 1.38629 1.38629
23502 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23503 27 2.97980 2.52563 3.03204 0.19727 27 - -
23504 1.38629 1.38629 1.38629 1.38629
23505 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23506 28 3.30705 0.14631 3.36166 2.73626 28 - -
23507 1.38629 1.38629 1.38629 1.38629
23508 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23509 29 2.86982 3.47591 0.13017 3.36931 29 - -
23510 1.38629 1.38629 1.38629 1.38629
23511 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23512 30 2.97980 2.52563 3.03204 0.19727 30 - -
23513 1.38629 1.38629 1.38629 1.38629
23514 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23515 31 2.86982 3.47591 0.13017 3.36931 31 - -
23516 1.38629 1.38629 1.38629 1.38629
23517 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23518 32 2.86982 3.47591 0.13017 3.36931 32 - -
23519 1.38629 1.38629 1.38629 1.38629
23520 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23521 33 2.86982 3.47591 0.13017 3.36931 33 - -
23522 1.38629 1.38629 1.38629 1.38629
23523 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23524 34 2.97980 2.52563 3.03204 0.19727 34 - -
23525 1.38629 1.38629 1.38629 1.38629
23526 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23527 35 3.30705 0.14631 3.36166 2.73626 35 - -
23528 1.38629 1.38629 1.38629 1.38629
23529 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23530 36 2.86982 3.47591 0.13017 3.36931 36 - -
23531 1.38629 1.38629 1.38629 1.38629
23532 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23533 37 0.15719 3.27118 2.73043 3.16274 37 - -
23534 1.38629 1.38629 1.38629 1.38629
23535 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23536 38 2.97980 2.52563 3.03204 0.19727 38 - -
23537 1.38629 1.38629 1.38629 1.38629
23538 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23539 39 2.86982 3.47591 0.13017 3.36931 39 - -
23540 1.38629 1.38629 1.38629 1.38629
23541 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23542 40 0.15719 3.27118 2.73043 3.16274 40 - -
23543 1.38629 1.38629 1.38629 1.38629
23544 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23545 41 0.15719 3.27118 2.73043 3.16274 41 - -
23546 1.38629 1.38629 1.38629 1.38629
23547 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23548 42 2.86982 3.47591 0.13017 3.36931 42 - -
23549 1.38629 1.38629 1.38629 1.38629
23550 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23551 43 0.15719 3.27118 2.73043 3.16274 43 - -
23552 1.38629 1.38629 1.38629 1.38629
23553 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23554 44 2.97980 2.52563 3.03204 0.19727 44 - -
23555 1.38629 1.38629 1.38629 1.38629
23556 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23557 45 3.30705 0.14631 3.36166 2.73626 45 - -
23558 1.38629 1.38629 1.38629 1.38629
23559 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
23560 //
23561 HMMER3/b [3.0 | March 2010]
23562 NAME 2_5.8_Metazoa_58S_start_fourg_long
23563 LENG 45
23564 ALPH DNA
23565 RF no
23566 CS no
23567 MAP yes
23568 DATE Fri Feb 24 23:19:51 2012
23569 NSEQ 5
23570 EFFN 3.334961
23571 CKSUM 284011394
23572 STATS LOCAL MSV -8.1464 0.71932
23573 STATS LOCAL VITERBI -7.7199 0.71932
23574 STATS LOCAL FORWARD -4.2570 0.71932
23575 HMM A C G T
23576 m->m m->i m->d i->m i->i d->m d->d
23577 COMPO 1.39548 1.58131 1.18843 1.41931
23578 1.38629 1.38629 1.38629 1.38629
23579 0.03680 4.01367 4.01367 1.46634 0.26236 0.00000 *
23580 1 3.43763 0.12967 3.48690 2.83229 1 - -
23581 1.38629 1.38629 1.38629 1.38629
23582 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23583 2 0.14138 3.38419 2.80447 3.28622 2 - -
23584 1.38629 1.38629 1.38629 1.38629
23585 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23586 3 0.14138 3.38419 2.80447 3.28622 3 - -
23587 1.38629 1.38629 1.38629 1.38629
23588 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23589 4 2.95026 3.59174 0.11672 3.49682 4 - -
23590 1.38629 1.38629 1.38629 1.38629
23591 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23592 5 3.09257 2.59766 3.14057 0.17804 5 - -
23593 1.38629 1.38629 1.38629 1.38629
23594 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23595 6 3.09257 2.59766 3.14057 0.17804 6 - -
23596 1.38629 1.38629 1.38629 1.38629
23597 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23598 7 0.14138 3.38419 2.80447 3.28622 7 - -
23599 1.38629 1.38629 1.38629 1.38629
23600 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23601 8 3.09257 2.59766 3.14057 0.17804 8 - -
23602 1.38629 1.38629 1.38629 1.38629
23603 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23604 9 2.95026 3.59174 0.11672 3.49682 9 - -
23605 1.38629 1.38629 1.38629 1.38629
23606 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23607 10 3.09257 2.59766 3.14057 0.17804 10 - -
23608 1.38629 1.38629 1.38629 1.38629
23609 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23610 11 3.43763 0.12967 3.48690 2.83229 11 - -
23611 1.38629 1.38629 1.38629 1.38629
23612 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23613 12 2.95026 3.59174 0.11672 3.49682 12 - -
23614 1.38629 1.38629 1.38629 1.38629
23615 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23616 13 2.95026 3.59174 0.11672 3.49682 13 - -
23617 1.38629 1.38629 1.38629 1.38629
23618 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23619 14 2.43516 0.73703 2.50766 1.04291 14 - -
23620 1.38629 1.38629 1.38629 1.38629
23621 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23622 15 2.95026 3.59174 0.11672 3.49682 15 - -
23623 1.38629 1.38629 1.38629 1.38629
23624 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23625 16 0.14138 3.38419 2.80447 3.28622 16 - -
23626 1.38629 1.38629 1.38629 1.38629
23627 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23628 17 0.14138 3.38419 2.80447 3.28622 17 - -
23629 1.38629 1.38629 1.38629 1.38629
23630 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23631 18 3.09257 2.59766 3.14057 0.17804 18 - -
23632 1.38629 1.38629 1.38629 1.38629
23633 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23634 19 3.43763 0.12967 3.48690 2.83229 19 - -
23635 1.38629 1.38629 1.38629 1.38629
23636 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23637 20 0.14138 3.38419 2.80447 3.28622 20 - -
23638 1.38629 1.38629 1.38629 1.38629
23639 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23640 21 3.43763 0.12967 3.48690 2.83229 21 - -
23641 1.38629 1.38629 1.38629 1.38629
23642 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23643 22 3.09257 2.59766 3.14057 0.17804 22 - -
23644 1.38629 1.38629 1.38629 1.38629
23645 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23646 23 3.09257 2.59766 3.14057 0.17804 23 - -
23647 1.38629 1.38629 1.38629 1.38629
23648 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23649 24 2.95026 3.59174 0.11672 3.49682 24 - -
23650 1.38629 1.38629 1.38629 1.38629
23651 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23652 25 2.95026 3.59174 0.11672 3.49682 25 - -
23653 1.38629 1.38629 1.38629 1.38629
23654 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23655 26 3.43763 0.12967 3.48690 2.83229 26 - -
23656 1.38629 1.38629 1.38629 1.38629
23657 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23658 27 3.09257 2.59766 3.14057 0.17804 27 - -
23659 1.38629 1.38629 1.38629 1.38629
23660 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23661 28 3.43763 0.12967 3.48690 2.83229 28 - -
23662 1.38629 1.38629 1.38629 1.38629
23663 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23664 29 2.95026 3.59174 0.11672 3.49682 29 - -
23665 1.38629 1.38629 1.38629 1.38629
23666 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23667 30 3.09257 2.59766 3.14057 0.17804 30 - -
23668 1.38629 1.38629 1.38629 1.38629
23669 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23670 31 2.95026 3.59174 0.11672 3.49682 31 - -
23671 1.38629 1.38629 1.38629 1.38629
23672 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23673 32 2.95026 3.59174 0.11672 3.49682 32 - -
23674 1.38629 1.38629 1.38629 1.38629
23675 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23676 33 2.95026 3.59174 0.11672 3.49682 33 - -
23677 1.38629 1.38629 1.38629 1.38629
23678 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23679 34 3.09257 2.59766 3.14057 0.17804 34 - -
23680 1.38629 1.38629 1.38629 1.38629
23681 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23682 35 3.43763 0.12967 3.48690 2.83229 35 - -
23683 1.38629 1.38629 1.38629 1.38629
23684 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23685 36 2.95026 3.59174 0.11672 3.49682 36 - -
23686 1.38629 1.38629 1.38629 1.38629
23687 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23688 37 0.14138 3.38419 2.80447 3.28622 37 - -
23689 1.38629 1.38629 1.38629 1.38629
23690 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23691 38 3.09257 2.59766 3.14057 0.17804 38 - -
23692 1.38629 1.38629 1.38629 1.38629
23693 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23694 39 2.95026 3.59174 0.11672 3.49682 39 - -
23695 1.38629 1.38629 1.38629 1.38629
23696 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23697 40 0.14138 3.38419 2.80447 3.28622 40 - -
23698 1.38629 1.38629 1.38629 1.38629
23699 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23700 41 0.14138 3.38419 2.80447 3.28622 41 - -
23701 1.38629 1.38629 1.38629 1.38629
23702 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23703 42 2.95026 3.59174 0.11672 3.49682 42 - -
23704 1.38629 1.38629 1.38629 1.38629
23705 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23706 43 0.14138 3.38419 2.80447 3.28622 43 - -
23707 1.38629 1.38629 1.38629 1.38629
23708 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23709 44 0.14138 3.38419 2.80447 3.28622 44 - -
23710 1.38629 1.38629 1.38629 1.38629
23711 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
23712 45 3.43763 0.12967 3.48690 2.83229 45 - -
23713 1.38629 1.38629 1.38629 1.38629
23714 0.01857 3.99544 * 1.46634 0.26236 0.00000 *
23715 //
23716 HMMER3/b [3.0 | March 2010]
23717 NAME 2_5.8_Metazoa_58S_start_fourh_long
23718 LENG 45
23719 ALPH DNA
23720 RF no
23721 CS no
23722 MAP yes
23723 DATE Fri Feb 24 23:19:56 2012
23724 NSEQ 4
23725 EFFN 3.535156
23726 CKSUM 2684874225
23727 STATS LOCAL MSV -7.5664 0.71933
23728 STATS LOCAL VITERBI -7.8243 0.71933
23729 STATS LOCAL FORWARD -4.2092 0.71933
23730 HMM A C G T
23731 m->m m->i m->d i->m i->i d->m d->d
23732 COMPO 1.34147 1.61360 1.27975 1.34223
23733 1.38629 1.38629 1.38629 1.38629
23734 0.03550 4.04920 4.04920 1.46634 0.26236 0.00000 *
23735 1 0.96697 2.16989 2.18618 0.93335 1 - -
23736 1.38629 1.38629 1.38629 1.38629
23737 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23738 2 0.13352 3.44594 2.84442 3.35389 2 - -
23739 1.38629 1.38629 1.38629 1.38629
23740 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23741 3 0.13352 3.44594 2.84442 3.35389 3 - -
23742 1.38629 1.38629 1.38629 1.38629
23743 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23744 4 2.99280 3.65396 0.11017 3.56561 4 - -
23745 1.38629 1.38629 1.38629 1.38629
23746 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23747 5 3.15540 2.63755 3.20098 0.16828 5 - -
23748 1.38629 1.38629 1.38629 1.38629
23749 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23750 6 3.15540 2.63755 3.20098 0.16828 6 - -
23751 1.38629 1.38629 1.38629 1.38629
23752 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23753 7 0.85306 2.55020 0.90229 2.40593 7 - -
23754 1.38629 1.38629 1.38629 1.38629
23755 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23756 8 3.50862 0.12155 3.55481 2.88365 8 - -
23757 1.38629 1.38629 1.38629 1.38629
23758 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23759 9 3.15540 2.63755 3.20098 0.16828 9 - -
23760 1.38629 1.38629 1.38629 1.38629
23761 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23762 10 3.15540 2.63755 3.20098 0.16828 10 - -
23763 1.38629 1.38629 1.38629 1.38629
23764 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23765 11 3.50862 0.12155 3.55481 2.88365 11 - -
23766 1.38629 1.38629 1.38629 1.38629
23767 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23768 12 2.99280 3.65396 0.11017 3.56561 12 - -
23769 1.38629 1.38629 1.38629 1.38629
23770 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23771 13 2.99280 3.65396 0.11017 3.56561 13 - -
23772 1.38629 1.38629 1.38629 1.38629
23773 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23774 14 3.15540 2.63755 3.20098 0.16828 14 - -
23775 1.38629 1.38629 1.38629 1.38629
23776 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23777 15 2.99280 3.65396 0.11017 3.56561 15 - -
23778 1.38629 1.38629 1.38629 1.38629
23779 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23780 16 2.99280 3.65396 0.11017 3.56561 16 - -
23781 1.38629 1.38629 1.38629 1.38629
23782 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23783 17 0.13352 3.44594 2.84442 3.35389 17 - -
23784 1.38629 1.38629 1.38629 1.38629
23785 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23786 18 3.15540 2.63755 3.20098 0.16828 18 - -
23787 1.38629 1.38629 1.38629 1.38629
23788 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23789 19 3.50862 0.12155 3.55481 2.88365 19 - -
23790 1.38629 1.38629 1.38629 1.38629
23791 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23792 20 0.13352 3.44594 2.84442 3.35389 20 - -
23793 1.38629 1.38629 1.38629 1.38629
23794 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23795 21 3.50862 0.12155 3.55481 2.88365 21 - -
23796 1.38629 1.38629 1.38629 1.38629
23797 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23798 22 3.15540 2.63755 3.20098 0.16828 22 - -
23799 1.38629 1.38629 1.38629 1.38629
23800 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23801 23 3.15540 2.63755 3.20098 0.16828 23 - -
23802 1.38629 1.38629 1.38629 1.38629
23803 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23804 24 2.99280 3.65396 0.11017 3.56561 24 - -
23805 1.38629 1.38629 1.38629 1.38629
23806 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23807 25 2.99280 3.65396 0.11017 3.56561 25 - -
23808 1.38629 1.38629 1.38629 1.38629
23809 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23810 26 3.15540 2.63755 3.20098 0.16828 26 - -
23811 1.38629 1.38629 1.38629 1.38629
23812 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23813 27 3.15540 2.63755 3.20098 0.16828 27 - -
23814 1.38629 1.38629 1.38629 1.38629
23815 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23816 28 3.50862 0.12155 3.55481 2.88365 28 - -
23817 1.38629 1.38629 1.38629 1.38629
23818 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23819 29 0.13352 3.44594 2.84442 3.35389 29 - -
23820 1.38629 1.38629 1.38629 1.38629
23821 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23822 30 3.50862 0.12155 3.55481 2.88365 30 - -
23823 1.38629 1.38629 1.38629 1.38629
23824 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23825 31 2.99280 3.65396 0.11017 3.56561 31 - -
23826 1.38629 1.38629 1.38629 1.38629
23827 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23828 32 2.99280 3.65396 0.11017 3.56561 32 - -
23829 1.38629 1.38629 1.38629 1.38629
23830 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23831 33 2.99280 3.65396 0.11017 3.56561 33 - -
23832 1.38629 1.38629 1.38629 1.38629
23833 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23834 34 3.15540 2.63755 3.20098 0.16828 34 - -
23835 1.38629 1.38629 1.38629 1.38629
23836 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23837 35 3.50862 0.12155 3.55481 2.88365 35 - -
23838 1.38629 1.38629 1.38629 1.38629
23839 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23840 36 2.99280 3.65396 0.11017 3.56561 36 - -
23841 1.38629 1.38629 1.38629 1.38629
23842 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23843 37 0.13352 3.44594 2.84442 3.35389 37 - -
23844 1.38629 1.38629 1.38629 1.38629
23845 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23846 38 3.15540 2.63755 3.20098 0.16828 38 - -
23847 1.38629 1.38629 1.38629 1.38629
23848 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23849 39 2.99280 3.65396 0.11017 3.56561 39 - -
23850 1.38629 1.38629 1.38629 1.38629
23851 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23852 40 0.13352 3.44594 2.84442 3.35389 40 - -
23853 1.38629 1.38629 1.38629 1.38629
23854 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23855 41 0.13352 3.44594 2.84442 3.35389 41 - -
23856 1.38629 1.38629 1.38629 1.38629
23857 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23858 42 0.13352 3.44594 2.84442 3.35389 42 - -
23859 1.38629 1.38629 1.38629 1.38629
23860 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23861 43 0.13352 3.44594 2.84442 3.35389 43 - -
23862 1.38629 1.38629 1.38629 1.38629
23863 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23864 44 0.13352 3.44594 2.84442 3.35389 44 - -
23865 1.38629 1.38629 1.38629 1.38629
23866 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547
23867 45 3.50862 0.12155 3.55481 2.88365 45 - -
23868 1.38629 1.38629 1.38629 1.38629
23869 0.01791 4.03161 * 1.46634 0.26236 0.00000 *
23870 //
23871 HMMER3/b [3.0 | March 2010]
23872 NAME 2_5.8_Metazoa_58S_start_fouri_long
23873 LENG 45
23874 ALPH DNA
23875 RF no
23876 CS no
23877 MAP yes
23878 DATE Fri Feb 24 23:20:00 2012
23879 NSEQ 4
23880 EFFN 3.207031
23881 CKSUM 860438363
23882 STATS LOCAL MSV -8.0999 0.71933
23883 STATS LOCAL VITERBI -7.9356 0.71933
23884 STATS LOCAL FORWARD -4.2503 0.71933
23885 HMM A C G T
23886 m->m m->i m->d i->m i->i d->m d->d
23887 COMPO 1.39743 1.54380 1.19256 1.44495
23888 1.38629 1.38629 1.38629 1.38629
23889 0.03769 3.99029 3.99029 1.46634 0.26236 0.00000 *
23890 1 0.14698 3.34251 2.77733 3.24063 1 - -
23891 1.38629 1.38629 1.38629 1.38629
23892 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23893 2 0.14698 3.34251 2.77733 3.24063 2 - -
23894 1.38629 1.38629 1.38629 1.38629
23895 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23896 3 0.14698 3.34251 2.77733 3.24063 3 - -
23897 1.38629 1.38629 1.38629 1.38629
23898 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23899 4 2.92101 3.54931 0.12145 3.45003 4 - -
23900 1.38629 1.38629 1.38629 1.38629
23901 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23902 5 3.05066 2.57097 3.10026 0.18492 5 - -
23903 1.38629 1.38629 1.38629 1.38629
23904 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23905 6 3.05066 2.57097 3.10026 0.18492 6 - -
23906 1.38629 1.38629 1.38629 1.38629
23907 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23908 7 2.92101 3.54931 0.12145 3.45003 7 - -
23909 1.38629 1.38629 1.38629 1.38629
23910 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23911 8 3.38956 0.13553 3.44084 2.79718 8 - -
23912 1.38629 1.38629 1.38629 1.38629
23913 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23914 9 3.05066 2.57097 3.10026 0.18492 9 - -
23915 1.38629 1.38629 1.38629 1.38629
23916 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23917 10 3.05066 2.57097 3.10026 0.18492 10 - -
23918 1.38629 1.38629 1.38629 1.38629
23919 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23920 11 3.38956 0.13553 3.44084 2.79718 11 - -
23921 1.38629 1.38629 1.38629 1.38629
23922 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23923 12 2.92101 3.54931 0.12145 3.45003 12 - -
23924 1.38629 1.38629 1.38629 1.38629
23925 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23926 13 2.92101 3.54931 0.12145 3.45003 13 - -
23927 1.38629 1.38629 1.38629 1.38629
23928 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23929 14 3.05066 2.57097 3.10026 0.18492 14 - -
23930 1.38629 1.38629 1.38629 1.38629
23931 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23932 15 2.92101 3.54931 0.12145 3.45003 15 - -
23933 1.38629 1.38629 1.38629 1.38629
23934 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23935 16 2.92101 3.54931 0.12145 3.45003 16 - -
23936 1.38629 1.38629 1.38629 1.38629
23937 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23938 17 0.14698 3.34251 2.77733 3.24063 17 - -
23939 1.38629 1.38629 1.38629 1.38629
23940 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23941 18 3.05066 2.57097 3.10026 0.18492 18 - -
23942 1.38629 1.38629 1.38629 1.38629
23943 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23944 19 3.38956 0.13553 3.44084 2.79718 19 - -
23945 1.38629 1.38629 1.38629 1.38629
23946 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23947 20 0.14698 3.34251 2.77733 3.24063 20 - -
23948 1.38629 1.38629 1.38629 1.38629
23949 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23950 21 3.38956 0.13553 3.44084 2.79718 21 - -
23951 1.38629 1.38629 1.38629 1.38629
23952 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23953 22 3.05066 2.57097 3.10026 0.18492 22 - -
23954 1.38629 1.38629 1.38629 1.38629
23955 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23956 23 3.38956 0.13553 3.44084 2.79718 23 - -
23957 1.38629 1.38629 1.38629 1.38629
23958 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23959 24 2.92101 3.54931 0.12145 3.45003 24 - -
23960 1.38629 1.38629 1.38629 1.38629
23961 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23962 25 2.92101 3.54931 0.12145 3.45003 25 - -
23963 1.38629 1.38629 1.38629 1.38629
23964 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23965 26 3.05066 2.57097 3.10026 0.18492 26 - -
23966 1.38629 1.38629 1.38629 1.38629
23967 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23968 27 3.05066 2.57097 3.10026 0.18492 27 - -
23969 1.38629 1.38629 1.38629 1.38629
23970 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23971 28 3.38956 0.13553 3.44084 2.79718 28 - -
23972 1.38629 1.38629 1.38629 1.38629
23973 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23974 29 2.92101 3.54931 0.12145 3.45003 29 - -
23975 1.38629 1.38629 1.38629 1.38629
23976 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23977 30 3.38956 0.13553 3.44084 2.79718 30 - -
23978 1.38629 1.38629 1.38629 1.38629
23979 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23980 31 2.92101 3.54931 0.12145 3.45003 31 - -
23981 1.38629 1.38629 1.38629 1.38629
23982 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23983 32 2.92101 3.54931 0.12145 3.45003 32 - -
23984 1.38629 1.38629 1.38629 1.38629
23985 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23986 33 2.92101 3.54931 0.12145 3.45003 33 - -
23987 1.38629 1.38629 1.38629 1.38629
23988 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23989 34 3.05066 2.57097 3.10026 0.18492 34 - -
23990 1.38629 1.38629 1.38629 1.38629
23991 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23992 35 3.38956 0.13553 3.44084 2.79718 35 - -
23993 1.38629 1.38629 1.38629 1.38629
23994 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23995 36 2.92101 3.54931 0.12145 3.45003 36 - -
23996 1.38629 1.38629 1.38629 1.38629
23997 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
23998 37 0.14698 3.34251 2.77733 3.24063 37 - -
23999 1.38629 1.38629 1.38629 1.38629
24000 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
24001 38 3.05066 2.57097 3.10026 0.18492 38 - -
24002 1.38629 1.38629 1.38629 1.38629
24003 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
24004 39 2.92101 3.54931 0.12145 3.45003 39 - -
24005 1.38629 1.38629 1.38629 1.38629
24006 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
24007 40 0.14698 3.34251 2.77733 3.24063 40 - -
24008 1.38629 1.38629 1.38629 1.38629
24009 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
24010 41 0.14698 3.34251 2.77733 3.24063 41 - -
24011 1.38629 1.38629 1.38629 1.38629
24012 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
24013 42 0.14698 3.34251 2.77733 3.24063 42 - -
24014 1.38629 1.38629 1.38629 1.38629
24015 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
24016 43 0.14698 3.34251 2.77733 3.24063 43 - -
24017 1.38629 1.38629 1.38629 1.38629
24018 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
24019 44 0.14698 3.34251 2.77733 3.24063 44 - -
24020 1.38629 1.38629 1.38629 1.38629
24021 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
24022 45 3.38956 0.13553 3.44084 2.79718 45 - -
24023 1.38629 1.38629 1.38629 1.38629
24024 0.01902 3.97162 * 1.46634 0.26236 0.00000 *
24025 //
24026 HMMER3/b [3.0 | March 2010]
24027 NAME 2_5.8_Metazoa_58S_start_fourj_long
24028 LENG 45
24029 ALPH DNA
24030 RF no
24031 CS no
24032 MAP yes
24033 DATE Fri Feb 24 23:20:06 2012
24034 NSEQ 17
24035 EFFN 3.266357
24036 CKSUM 4174304823
24037 STATS LOCAL MSV -8.1085 0.71932
24038 STATS LOCAL VITERBI -7.9322 0.71932
24039 STATS LOCAL FORWARD -3.9676 0.71932
24040 HMM A C G T
24041 m->m m->i m->d i->m i->i d->m d->d
24042 COMPO 1.34496 1.46661 1.24888 1.50544
24043 1.38629 1.38629 1.38629 1.38629
24044 0.03727 4.00120 4.00120 1.46634 0.26236 0.00000 *
24045 1 0.32672 2.69881 2.46028 2.07132 1 - -
24046 1.38629 1.38629 1.38629 1.38629
24047 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24048 2 0.14432 3.36206 2.79008 3.26201 2 - -
24049 1.38629 1.38629 1.38629 1.38629
24050 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24051 3 0.14432 3.36206 2.79008 3.26201 3 - -
24052 1.38629 1.38629 1.38629 1.38629
24053 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24054 4 2.93479 3.56925 0.11920 3.47201 4 - -
24055 1.38629 1.38629 1.38629 1.38629
24056 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24057 5 3.07027 2.58347 3.11913 0.18166 5 - -
24058 1.38629 1.38629 1.38629 1.38629
24059 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24060 6 3.07027 2.58347 3.11913 0.18166 6 - -
24061 1.38629 1.38629 1.38629 1.38629
24062 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24063 7 0.14432 3.36206 2.79008 3.26201 7 - -
24064 1.38629 1.38629 1.38629 1.38629
24065 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24066 8 3.41212 0.13274 3.46246 2.81369 8 - -
24067 1.38629 1.38629 1.38629 1.38629
24068 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24069 9 3.07027 2.58347 3.11913 0.18166 9 - -
24070 1.38629 1.38629 1.38629 1.38629
24071 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24072 10 3.41212 0.13274 3.46246 2.81369 10 - -
24073 1.38629 1.38629 1.38629 1.38629
24074 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24075 11 3.41212 0.13274 3.46246 2.81369 11 - -
24076 1.38629 1.38629 1.38629 1.38629
24077 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24078 12 2.93479 3.56925 0.11920 3.47201 12 - -
24079 1.38629 1.38629 1.38629 1.38629
24080 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24081 13 2.93479 3.56925 0.11920 3.47201 13 - -
24082 1.38629 1.38629 1.38629 1.38629
24083 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24084 14 3.07027 2.58347 3.11913 0.18166 14 - -
24085 1.38629 1.38629 1.38629 1.38629
24086 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24087 15 2.93479 3.56925 0.11920 3.47201 15 - -
24088 1.38629 1.38629 1.38629 1.38629
24089 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24090 16 2.93479 3.56925 0.11920 3.47201 16 - -
24091 1.38629 1.38629 1.38629 1.38629
24092 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24093 17 0.14432 3.36206 2.79008 3.26201 17 - -
24094 1.38629 1.38629 1.38629 1.38629
24095 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24096 18 3.07027 2.58347 3.11913 0.18166 18 - -
24097 1.38629 1.38629 1.38629 1.38629
24098 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24099 19 3.41212 0.13274 3.46246 2.81369 19 - -
24100 1.38629 1.38629 1.38629 1.38629
24101 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24102 20 0.14432 3.36206 2.79008 3.26201 20 - -
24103 1.38629 1.38629 1.38629 1.38629
24104 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24105 21 3.41212 0.13274 3.46246 2.81369 21 - -
24106 1.38629 1.38629 1.38629 1.38629
24107 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24108 22 3.07027 2.58347 3.11913 0.18166 22 - -
24109 1.38629 1.38629 1.38629 1.38629
24110 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24111 23 3.41212 0.13274 3.46246 2.81369 23 - -
24112 1.38629 1.38629 1.38629 1.38629
24113 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24114 24 2.93479 3.56925 0.11920 3.47201 24 - -
24115 1.38629 1.38629 1.38629 1.38629
24116 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24117 25 2.93479 3.56925 0.11920 3.47201 25 - -
24118 1.38629 1.38629 1.38629 1.38629
24119 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24120 26 3.07027 2.58347 3.11913 0.18166 26 - -
24121 1.38629 1.38629 1.38629 1.38629
24122 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24123 27 3.07027 2.58347 3.11913 0.18166 27 - -
24124 1.38629 1.38629 1.38629 1.38629
24125 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24126 28 3.41212 0.13274 3.46246 2.81369 28 - -
24127 1.38629 1.38629 1.38629 1.38629
24128 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24129 29 2.93479 3.56925 0.11920 3.47201 29 - -
24130 1.38629 1.38629 1.38629 1.38629
24131 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24132 30 3.41212 0.13274 3.46246 2.81369 30 - -
24133 1.38629 1.38629 1.38629 1.38629
24134 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24135 31 2.93479 3.56925 0.11920 3.47201 31 - -
24136 1.38629 1.38629 1.38629 1.38629
24137 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24138 32 2.93479 3.56925 0.11920 3.47201 32 - -
24139 1.38629 1.38629 1.38629 1.38629
24140 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24141 33 2.93479 3.56925 0.11920 3.47201 33 - -
24142 1.38629 1.38629 1.38629 1.38629
24143 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24144 34 3.07027 2.58347 3.11913 0.18166 34 - -
24145 1.38629 1.38629 1.38629 1.38629
24146 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24147 35 3.41212 0.13274 3.46246 2.81369 35 - -
24148 1.38629 1.38629 1.38629 1.38629
24149 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24150 36 2.93479 3.56925 0.11920 3.47201 36 - -
24151 1.38629 1.38629 1.38629 1.38629
24152 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24153 37 0.14432 3.36206 2.79008 3.26201 37 - -
24154 1.38629 1.38629 1.38629 1.38629
24155 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24156 38 3.07027 2.58347 3.11913 0.18166 38 - -
24157 1.38629 1.38629 1.38629 1.38629
24158 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24159 39 2.93479 3.56925 0.11920 3.47201 39 - -
24160 1.38629 1.38629 1.38629 1.38629
24161 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24162 40 0.14432 3.36206 2.79008 3.26201 40 - -
24163 1.38629 1.38629 1.38629 1.38629
24164 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24165 41 0.14432 3.36206 2.79008 3.26201 41 - -
24166 1.38629 1.38629 1.38629 1.38629
24167 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24168 42 0.14432 3.36206 2.79008 3.26201 42 - -
24169 1.38629 1.38629 1.38629 1.38629
24170 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24171 43 0.14432 3.36206 2.79008 3.26201 43 - -
24172 1.38629 1.38629 1.38629 1.38629
24173 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24174 44 0.14432 3.36206 2.79008 3.26201 44 - -
24175 1.38629 1.38629 1.38629 1.38629
24176 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547
24177 45 3.41212 0.13274 3.46246 2.81369 45 - -
24178 1.38629 1.38629 1.38629 1.38629
24179 0.01881 3.98273 * 1.46634 0.26236 0.00000 *
24180 //
24181 HMMER3/b [3.0 | March 2010]
24182 NAME 2_5.8_Metazoa_58S_start_fourk_long
24183 LENG 45
24184 ALPH DNA
24185 RF no
24186 CS no
24187 MAP yes
24188 DATE Fri Feb 24 23:20:12 2012
24189 NSEQ 2
24190 EFFN 2.000000
24191 CKSUM 230231236
24192 STATS LOCAL MSV -7.4638 0.72773
24193 STATS LOCAL VITERBI -8.4182 0.72773
24194 STATS LOCAL FORWARD -3.5515 0.72773
24195 HMM A C G T
24196 m->m m->i m->d i->m i->i d->m d->d
24197 COMPO 1.39335 1.53233 1.20977 1.43776
24198 1.38629 1.38629 1.38629 1.38629
24199 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
24200 1 2.57915 2.25909 2.64442 0.28946 1 - -
24201 1.38629 1.38629 1.38629 1.38629
24202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24203 2 0.23862 2.84929 2.43386 2.70756 2 - -
24204 1.38629 1.38629 1.38629 1.38629
24205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24206 3 0.23862 2.84929 2.43386 2.70756 3 - -
24207 1.38629 1.38629 1.38629 1.38629
24208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24209 4 2.53331 3.02441 0.20344 2.88069 4 - -
24210 1.38629 1.38629 1.38629 1.38629
24211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24212 5 2.57915 2.25909 2.64442 0.28946 5 - -
24213 1.38629 1.38629 1.38629 1.38629
24214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24215 6 2.57915 2.25909 2.64442 0.28946 6 - -
24216 1.38629 1.38629 1.38629 1.38629
24217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24218 7 0.23862 2.84929 2.43386 2.70756 7 - -
24219 1.38629 1.38629 1.38629 1.38629
24220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24221 8 2.81865 0.23582 2.88868 2.35662 8 - -
24222 1.38629 1.38629 1.38629 1.38629
24223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24224 9 2.53331 3.02441 0.20344 2.88069 9 - -
24225 1.38629 1.38629 1.38629 1.38629
24226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24227 10 2.57915 2.25909 2.64442 0.28946 10 - -
24228 1.38629 1.38629 1.38629 1.38629
24229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24230 11 2.81865 0.23582 2.88868 2.35662 11 - -
24231 1.38629 1.38629 1.38629 1.38629
24232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24233 12 2.53331 3.02441 0.20344 2.88069 12 - -
24234 1.38629 1.38629 1.38629 1.38629
24235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24236 13 2.53331 3.02441 0.20344 2.88069 13 - -
24237 1.38629 1.38629 1.38629 1.38629
24238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24239 14 2.57915 2.25909 2.64442 0.28946 14 - -
24240 1.38629 1.38629 1.38629 1.38629
24241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24242 15 2.53331 3.02441 0.20344 2.88069 15 - -
24243 1.38629 1.38629 1.38629 1.38629
24244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24245 16 2.53331 3.02441 0.20344 2.88069 16 - -
24246 1.38629 1.38629 1.38629 1.38629
24247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24248 17 0.23862 2.84929 2.43386 2.70756 17 - -
24249 1.38629 1.38629 1.38629 1.38629
24250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24251 18 2.57915 2.25909 2.64442 0.28946 18 - -
24252 1.38629 1.38629 1.38629 1.38629
24253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24254 19 2.81865 0.23582 2.88868 2.35662 19 - -
24255 1.38629 1.38629 1.38629 1.38629
24256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24257 20 0.23862 2.84929 2.43386 2.70756 20 - -
24258 1.38629 1.38629 1.38629 1.38629
24259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24260 21 2.81865 0.23582 2.88868 2.35662 21 - -
24261 1.38629 1.38629 1.38629 1.38629
24262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24263 22 2.57915 2.25909 2.64442 0.28946 22 - -
24264 1.38629 1.38629 1.38629 1.38629
24265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24266 23 2.81865 0.23582 2.88868 2.35662 23 - -
24267 1.38629 1.38629 1.38629 1.38629
24268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24269 24 2.53331 3.02441 0.20344 2.88069 24 - -
24270 1.38629 1.38629 1.38629 1.38629
24271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24272 25 2.53331 3.02441 0.20344 2.88069 25 - -
24273 1.38629 1.38629 1.38629 1.38629
24274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24275 26 2.57915 2.25909 2.64442 0.28946 26 - -
24276 1.38629 1.38629 1.38629 1.38629
24277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24278 27 2.57915 2.25909 2.64442 0.28946 27 - -
24279 1.38629 1.38629 1.38629 1.38629
24280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24281 28 2.81865 0.23582 2.88868 2.35662 28 - -
24282 1.38629 1.38629 1.38629 1.38629
24283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24284 29 2.53331 3.02441 0.20344 2.88069 29 - -
24285 1.38629 1.38629 1.38629 1.38629
24286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24287 30 2.81865 0.23582 2.88868 2.35662 30 - -
24288 1.38629 1.38629 1.38629 1.38629
24289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24290 31 2.53331 3.02441 0.20344 2.88069 31 - -
24291 1.38629 1.38629 1.38629 1.38629
24292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24293 32 2.53331 3.02441 0.20344 2.88069 32 - -
24294 1.38629 1.38629 1.38629 1.38629
24295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24296 33 2.53331 3.02441 0.20344 2.88069 33 - -
24297 1.38629 1.38629 1.38629 1.38629
24298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24299 34 2.57915 2.25909 2.64442 0.28946 34 - -
24300 1.38629 1.38629 1.38629 1.38629
24301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24302 35 2.81865 0.23582 2.88868 2.35662 35 - -
24303 1.38629 1.38629 1.38629 1.38629
24304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24305 36 2.53331 3.02441 0.20344 2.88069 36 - -
24306 1.38629 1.38629 1.38629 1.38629
24307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24308 37 0.23862 2.84929 2.43386 2.70756 37 - -
24309 1.38629 1.38629 1.38629 1.38629
24310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24311 38 2.57915 2.25909 2.64442 0.28946 38 - -
24312 1.38629 1.38629 1.38629 1.38629
24313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24314 39 2.53331 3.02441 0.20344 2.88069 39 - -
24315 1.38629 1.38629 1.38629 1.38629
24316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24317 40 0.23862 2.84929 2.43386 2.70756 40 - -
24318 1.38629 1.38629 1.38629 1.38629
24319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24320 41 0.23862 2.84929 2.43386 2.70756 41 - -
24321 1.38629 1.38629 1.38629 1.38629
24322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24323 42 0.23862 2.84929 2.43386 2.70756 42 - -
24324 1.38629 1.38629 1.38629 1.38629
24325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24326 43 0.23862 2.84929 2.43386 2.70756 43 - -
24327 1.38629 1.38629 1.38629 1.38629
24328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24329 44 0.23862 2.84929 2.43386 2.70756 44 - -
24330 1.38629 1.38629 1.38629 1.38629
24331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24332 45 2.81865 0.23582 2.88868 2.35662 45 - -
24333 1.38629 1.38629 1.38629 1.38629
24334 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
24335 //
24336 HMMER3/b [3.0 | March 2010]
24337 NAME 2_5.8_Metazoa_58S_start_fourl_long
24338 LENG 45
24339 ALPH DNA
24340 RF no
24341 CS no
24342 MAP yes
24343 DATE Fri Feb 24 23:20:17 2012
24344 NSEQ 18
24345 EFFN 3.730957
24346 CKSUM 2863177216
24347 STATS LOCAL MSV -7.0840 0.71932
24348 STATS LOCAL VITERBI -7.7169 0.71932
24349 STATS LOCAL FORWARD -4.0032 0.71932
24350 HMM A C G T
24351 m->m m->i m->d i->m i->i d->m d->d
24352 COMPO 1.42749 1.45323 1.23415 1.44734
24353 1.38629 1.38629 1.38629 1.38629
24354 0.03430 4.08277 4.08277 1.46634 0.26236 0.00000 *
24355 1 2.80260 1.78176 2.86243 0.33705 1 - -
24356 1.38629 1.38629 1.38629 1.38629
24357 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24358 2 0.12676 3.50250 2.88081 3.41598 2 - -
24359 1.38629 1.38629 1.38629 1.38629
24360 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24361 3 0.12676 3.50250 2.88081 3.41598 3 - -
24362 1.38629 1.38629 1.38629 1.38629
24363 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24364 4 3.03100 3.71027 0.10459 3.62800 4 - -
24365 1.38629 1.38629 1.38629 1.38629
24366 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24367 5 3.21376 2.67455 3.25706 0.15975 5 - -
24368 1.38629 1.38629 1.38629 1.38629
24369 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24370 6 3.21376 2.67455 3.25706 0.15975 6 - -
24371 1.38629 1.38629 1.38629 1.38629
24372 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24373 7 0.12676 3.50250 2.88081 3.41598 7 - -
24374 1.38629 1.38629 1.38629 1.38629
24375 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24376 8 3.57332 0.11466 3.61663 2.93001 8 - -
24377 1.38629 1.38629 1.38629 1.38629
24378 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24379 9 3.21376 2.67455 3.25706 0.15975 9 - -
24380 1.38629 1.38629 1.38629 1.38629
24381 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24382 10 3.57332 0.11466 3.61663 2.93001 10 - -
24383 1.38629 1.38629 1.38629 1.38629
24384 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24385 11 3.57332 0.11466 3.61663 2.93001 11 - -
24386 1.38629 1.38629 1.38629 1.38629
24387 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24388 12 3.03100 3.71027 0.10459 3.62800 12 - -
24389 1.38629 1.38629 1.38629 1.38629
24390 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24391 13 3.03100 3.71027 0.10459 3.62800 13 - -
24392 1.38629 1.38629 1.38629 1.38629
24393 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24394 14 3.21376 2.67455 3.25706 0.15975 14 - -
24395 1.38629 1.38629 1.38629 1.38629
24396 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24397 15 3.03100 3.71027 0.10459 3.62800 15 - -
24398 1.38629 1.38629 1.38629 1.38629
24399 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24400 16 3.03100 3.71027 0.10459 3.62800 16 - -
24401 1.38629 1.38629 1.38629 1.38629
24402 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24403 17 0.12676 3.50250 2.88081 3.41598 17 - -
24404 1.38629 1.38629 1.38629 1.38629
24405 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24406 18 2.90492 1.97839 2.96091 0.28080 18 - -
24407 1.38629 1.38629 1.38629 1.38629
24408 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24409 19 3.57332 0.11466 3.61663 2.93001 19 - -
24410 1.38629 1.38629 1.38629 1.38629
24411 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24412 20 0.12676 3.50250 2.88081 3.41598 20 - -
24413 1.38629 1.38629 1.38629 1.38629
24414 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24415 21 3.57332 0.11466 3.61663 2.93001 21 - -
24416 1.38629 1.38629 1.38629 1.38629
24417 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24418 22 3.21376 2.67455 3.25706 0.15975 22 - -
24419 1.38629 1.38629 1.38629 1.38629
24420 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24421 23 2.90492 1.97839 2.96091 0.28080 23 - -
24422 1.38629 1.38629 1.38629 1.38629
24423 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24424 24 3.03100 3.71027 0.10459 3.62800 24 - -
24425 1.38629 1.38629 1.38629 1.38629
24426 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24427 25 3.03100 3.71027 0.10459 3.62800 25 - -
24428 1.38629 1.38629 1.38629 1.38629
24429 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24430 26 3.07718 0.24256 3.13733 2.07228 26 - -
24431 1.38629 1.38629 1.38629 1.38629
24432 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24433 27 3.21376 2.67455 3.25706 0.15975 27 - -
24434 1.38629 1.38629 1.38629 1.38629
24435 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24436 28 3.27023 0.18298 3.32440 2.37277 28 - -
24437 1.38629 1.38629 1.38629 1.38629
24438 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24439 29 1.95975 3.10588 0.26960 2.98307 29 - -
24440 1.38629 1.38629 1.38629 1.38629
24441 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24442 30 3.57332 0.11466 3.61663 2.93001 30 - -
24443 1.38629 1.38629 1.38629 1.38629
24444 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24445 31 3.03100 3.71027 0.10459 3.62800 31 - -
24446 1.38629 1.38629 1.38629 1.38629
24447 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24448 32 3.03100 3.71027 0.10459 3.62800 32 - -
24449 1.38629 1.38629 1.38629 1.38629
24450 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24451 33 2.76500 3.19127 0.19589 2.60634 33 - -
24452 1.38629 1.38629 1.38629 1.38629
24453 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24454 34 3.21376 2.67455 3.25706 0.15975 34 - -
24455 1.38629 1.38629 1.38629 1.38629
24456 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24457 35 3.57332 0.11466 3.61663 2.93001 35 - -
24458 1.38629 1.38629 1.38629 1.38629
24459 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24460 36 3.03100 3.71027 0.10459 3.62800 36 - -
24461 1.38629 1.38629 1.38629 1.38629
24462 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24463 37 0.12676 3.50250 2.88081 3.41598 37 - -
24464 1.38629 1.38629 1.38629 1.38629
24465 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24466 38 3.21376 2.67455 3.25706 0.15975 38 - -
24467 1.38629 1.38629 1.38629 1.38629
24468 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24469 39 3.03100 3.71027 0.10459 3.62800 39 - -
24470 1.38629 1.38629 1.38629 1.38629
24471 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24472 40 0.12676 3.50250 2.88081 3.41598 40 - -
24473 1.38629 1.38629 1.38629 1.38629
24474 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24475 41 0.12676 3.50250 2.88081 3.41598 41 - -
24476 1.38629 1.38629 1.38629 1.38629
24477 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24478 42 0.90738 2.58515 0.83466 2.44170 42 - -
24479 1.38629 1.38629 1.38629 1.38629
24480 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24481 43 0.12676 3.50250 2.88081 3.41598 43 - -
24482 1.38629 1.38629 1.38629 1.38629
24483 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24484 44 0.12676 3.50250 2.88081 3.41598 44 - -
24485 1.38629 1.38629 1.38629 1.38629
24486 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547
24487 45 3.57332 0.11466 3.61663 2.93001 45 - -
24488 1.38629 1.38629 1.38629 1.38629
24489 0.01730 4.06577 * 1.46634 0.26236 0.00000 *
24490 //
24491 HMMER3/b [3.0 | March 2010]
24492 NAME 2_5.8_Metazoa_58S_start_fourm_long
24493 LENG 45
24494 ALPH DNA
24495 RF no
24496 CS no
24497 MAP yes
24498 DATE Fri Feb 24 23:20:22 2012
24499 NSEQ 9
24500 EFFN 3.555176
24501 CKSUM 2524060174
24502 STATS LOCAL MSV -7.4231 0.71932
24503 STATS LOCAL VITERBI -7.5972 0.71932
24504 STATS LOCAL FORWARD -4.3998 0.71932
24505 HMM A C G T
24506 m->m m->i m->d i->m i->i d->m d->d
24507 COMPO 1.28371 1.60225 1.29933 1.39096
24508 1.38629 1.38629 1.38629 1.38629
24509 0.03537 4.05268 4.05268 1.46634 0.26236 0.00000 *
24510 1 1.07668 2.16651 2.20381 0.83398 1 - -
24511 1.38629 1.38629 1.38629 1.38629
24512 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24513 2 0.92278 1.50243 2.05951 1.37641 2 - -
24514 1.38629 1.38629 1.38629 1.38629
24515 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24516 3 0.13279 3.45189 2.84825 3.36042 3 - -
24517 1.38629 1.38629 1.38629 1.38629
24518 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24519 4 2.99686 3.65992 0.10956 3.57220 4 - -
24520 1.38629 1.38629 1.38629 1.38629
24521 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24522 5 3.51544 0.12080 3.56134 2.88856 5 - -
24523 1.38629 1.38629 1.38629 1.38629
24524 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24525 6 3.16150 2.64143 3.20685 0.16736 6 - -
24526 1.38629 1.38629 1.38629 1.38629
24527 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24528 7 0.13279 3.45189 2.84825 3.36042 7 - -
24529 1.38629 1.38629 1.38629 1.38629
24530 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24531 8 3.16150 2.64143 3.20685 0.16736 8 - -
24532 1.38629 1.38629 1.38629 1.38629
24533 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24534 9 0.13279 3.45189 2.84825 3.36042 9 - -
24535 1.38629 1.38629 1.38629 1.38629
24536 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24537 10 3.16150 2.64143 3.20685 0.16736 10 - -
24538 1.38629 1.38629 1.38629 1.38629
24539 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24540 11 3.51544 0.12080 3.56134 2.88856 11 - -
24541 1.38629 1.38629 1.38629 1.38629
24542 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24543 12 2.99686 3.65992 0.10956 3.57220 12 - -
24544 1.38629 1.38629 1.38629 1.38629
24545 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24546 13 2.99686 3.65992 0.10956 3.57220 13 - -
24547 1.38629 1.38629 1.38629 1.38629
24548 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24549 14 3.16150 2.64143 3.20685 0.16736 14 - -
24550 1.38629 1.38629 1.38629 1.38629
24551 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24552 15 2.99686 3.65992 0.10956 3.57220 15 - -
24553 1.38629 1.38629 1.38629 1.38629
24554 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24555 16 2.99686 3.65992 0.10956 3.57220 16 - -
24556 1.38629 1.38629 1.38629 1.38629
24557 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24558 17 0.13279 3.45189 2.84825 3.36042 17 - -
24559 1.38629 1.38629 1.38629 1.38629
24560 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24561 18 3.16150 2.64143 3.20685 0.16736 18 - -
24562 1.38629 1.38629 1.38629 1.38629
24563 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24564 19 3.51544 0.12080 3.56134 2.88856 19 - -
24565 1.38629 1.38629 1.38629 1.38629
24566 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24567 20 0.13279 3.45189 2.84825 3.36042 20 - -
24568 1.38629 1.38629 1.38629 1.38629
24569 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24570 21 3.51544 0.12080 3.56134 2.88856 21 - -
24571 1.38629 1.38629 1.38629 1.38629
24572 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24573 22 3.16150 2.64143 3.20685 0.16736 22 - -
24574 1.38629 1.38629 1.38629 1.38629
24575 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24576 23 3.16150 2.64143 3.20685 0.16736 23 - -
24577 1.38629 1.38629 1.38629 1.38629
24578 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24579 24 2.99686 3.65992 0.10956 3.57220 24 - -
24580 1.38629 1.38629 1.38629 1.38629
24581 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24582 25 2.99686 3.65992 0.10956 3.57220 25 - -
24583 1.38629 1.38629 1.38629 1.38629
24584 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24585 26 3.51544 0.12080 3.56134 2.88856 26 - -
24586 1.38629 1.38629 1.38629 1.38629
24587 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24588 27 3.16150 2.64143 3.20685 0.16736 27 - -
24589 1.38629 1.38629 1.38629 1.38629
24590 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24591 28 3.51544 0.12080 3.56134 2.88856 28 - -
24592 1.38629 1.38629 1.38629 1.38629
24593 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24594 29 2.99686 3.65992 0.10956 3.57220 29 - -
24595 1.38629 1.38629 1.38629 1.38629
24596 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24597 30 3.16150 2.64143 3.20685 0.16736 30 - -
24598 1.38629 1.38629 1.38629 1.38629
24599 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24600 31 0.13279 3.45189 2.84825 3.36042 31 - -
24601 1.38629 1.38629 1.38629 1.38629
24602 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24603 32 2.99686 3.65992 0.10956 3.57220 32 - -
24604 1.38629 1.38629 1.38629 1.38629
24605 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24606 33 0.13279 3.45189 2.84825 3.36042 33 - -
24607 1.38629 1.38629 1.38629 1.38629
24608 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24609 34 3.16150 2.64143 3.20685 0.16736 34 - -
24610 1.38629 1.38629 1.38629 1.38629
24611 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24612 35 3.51544 0.12080 3.56134 2.88856 35 - -
24613 1.38629 1.38629 1.38629 1.38629
24614 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24615 36 2.99686 3.65992 0.10956 3.57220 36 - -
24616 1.38629 1.38629 1.38629 1.38629
24617 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24618 37 0.13279 3.45189 2.84825 3.36042 37 - -
24619 1.38629 1.38629 1.38629 1.38629
24620 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24621 38 3.16150 2.64143 3.20685 0.16736 38 - -
24622 1.38629 1.38629 1.38629 1.38629
24623 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24624 39 2.99686 3.65992 0.10956 3.57220 39 - -
24625 1.38629 1.38629 1.38629 1.38629
24626 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24627 40 0.13279 3.45189 2.84825 3.36042 40 - -
24628 1.38629 1.38629 1.38629 1.38629
24629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24630 41 0.13279 3.45189 2.84825 3.36042 41 - -
24631 1.38629 1.38629 1.38629 1.38629
24632 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24633 42 2.99686 3.65992 0.10956 3.57220 42 - -
24634 1.38629 1.38629 1.38629 1.38629
24635 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24636 43 0.13279 3.45189 2.84825 3.36042 43 - -
24637 1.38629 1.38629 1.38629 1.38629
24638 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24639 44 0.13279 3.45189 2.84825 3.36042 44 - -
24640 1.38629 1.38629 1.38629 1.38629
24641 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
24642 45 3.51544 0.12080 3.56134 2.88856 45 - -
24643 1.38629 1.38629 1.38629 1.38629
24644 0.01784 4.03516 * 1.46634 0.26236 0.00000 *
24645 //
24646 HMMER3/b [3.0 | March 2010]
24647 NAME 2_5.8_Metazoa_58S_start_fourteen_long
24648 LENG 45
24649 ALPH DNA
24650 RF no
24651 CS no
24652 MAP yes
24653 DATE Fri Feb 24 23:22:54 2012
24654 NSEQ 4
24655 EFFN 3.199219
24656 CKSUM 535846906
24657 STATS LOCAL MSV -8.1777 0.71932
24658 STATS LOCAL VITERBI -7.7998 0.71932
24659 STATS LOCAL FORWARD -4.0096 0.71932
24660 HMM A C G T
24661 m->m m->i m->d i->m i->i d->m d->d
24662 COMPO 1.33545 1.46596 1.25158 1.51390
24663 1.38629 1.38629 1.38629 1.38629
24664 0.03775 3.98884 3.98884 1.46634 0.26236 0.00000 *
24665 1 3.38655 0.13590 3.43796 2.79498 1 - -
24666 1.38629 1.38629 1.38629 1.38629
24667 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24668 2 0.14734 3.33991 2.77563 3.23778 2 - -
24669 1.38629 1.38629 1.38629 1.38629
24670 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24671 3 0.14734 3.33991 2.77563 3.23778 3 - -
24672 1.38629 1.38629 1.38629 1.38629
24673 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24674 4 3.38655 0.13590 3.43796 2.79498 4 - -
24675 1.38629 1.38629 1.38629 1.38629
24676 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24677 5 0.14734 3.33991 2.77563 3.23778 5 - -
24678 1.38629 1.38629 1.38629 1.38629
24679 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24680 6 3.38655 0.13590 3.43796 2.79498 6 - -
24681 1.38629 1.38629 1.38629 1.38629
24682 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24683 7 3.04806 2.56931 3.09775 0.18535 7 - -
24684 1.38629 1.38629 1.38629 1.38629
24685 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24686 8 3.04806 2.56931 3.09775 0.18535 8 - -
24687 1.38629 1.38629 1.38629 1.38629
24688 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24689 9 3.04806 2.56931 3.09775 0.18535 9 - -
24690 1.38629 1.38629 1.38629 1.38629
24691 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24692 10 0.14734 3.33991 2.77563 3.23778 10 - -
24693 1.38629 1.38629 1.38629 1.38629
24694 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24695 11 3.38655 0.13590 3.43796 2.79498 11 - -
24696 1.38629 1.38629 1.38629 1.38629
24697 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24698 12 0.14734 3.33991 2.77563 3.23778 12 - -
24699 1.38629 1.38629 1.38629 1.38629
24700 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24701 13 2.91917 3.54665 0.12176 3.44709 13 - -
24702 1.38629 1.38629 1.38629 1.38629
24703 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24704 14 3.04806 2.56931 3.09775 0.18535 14 - -
24705 1.38629 1.38629 1.38629 1.38629
24706 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24707 15 2.91917 3.54665 0.12176 3.44709 15 - -
24708 1.38629 1.38629 1.38629 1.38629
24709 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24710 16 2.91917 3.54665 0.12176 3.44709 16 - -
24711 1.38629 1.38629 1.38629 1.38629
24712 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24713 17 0.14734 3.33991 2.77563 3.23778 17 - -
24714 1.38629 1.38629 1.38629 1.38629
24715 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24716 18 3.04806 2.56931 3.09775 0.18535 18 - -
24717 1.38629 1.38629 1.38629 1.38629
24718 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24719 19 3.38655 0.13590 3.43796 2.79498 19 - -
24720 1.38629 1.38629 1.38629 1.38629
24721 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24722 20 0.14734 3.33991 2.77563 3.23778 20 - -
24723 1.38629 1.38629 1.38629 1.38629
24724 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24725 21 3.38655 0.13590 3.43796 2.79498 21 - -
24726 1.38629 1.38629 1.38629 1.38629
24727 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24728 22 3.04806 2.56931 3.09775 0.18535 22 - -
24729 1.38629 1.38629 1.38629 1.38629
24730 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24731 23 3.04806 2.56931 3.09775 0.18535 23 - -
24732 1.38629 1.38629 1.38629 1.38629
24733 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24734 24 2.91917 3.54665 0.12176 3.44709 24 - -
24735 1.38629 1.38629 1.38629 1.38629
24736 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24737 25 2.91917 3.54665 0.12176 3.44709 25 - -
24738 1.38629 1.38629 1.38629 1.38629
24739 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24740 26 3.38655 0.13590 3.43796 2.79498 26 - -
24741 1.38629 1.38629 1.38629 1.38629
24742 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24743 27 3.04806 2.56931 3.09775 0.18535 27 - -
24744 1.38629 1.38629 1.38629 1.38629
24745 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24746 28 3.38655 0.13590 3.43796 2.79498 28 - -
24747 1.38629 1.38629 1.38629 1.38629
24748 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24749 29 2.91917 3.54665 0.12176 3.44709 29 - -
24750 1.38629 1.38629 1.38629 1.38629
24751 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24752 30 2.91917 3.54665 0.12176 3.44709 30 - -
24753 1.38629 1.38629 1.38629 1.38629
24754 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24755 31 2.91917 3.54665 0.12176 3.44709 31 - -
24756 1.38629 1.38629 1.38629 1.38629
24757 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24758 32 2.91917 3.54665 0.12176 3.44709 32 - -
24759 1.38629 1.38629 1.38629 1.38629
24760 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24761 33 2.91917 3.54665 0.12176 3.44709 33 - -
24762 1.38629 1.38629 1.38629 1.38629
24763 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24764 34 3.04806 2.56931 3.09775 0.18535 34 - -
24765 1.38629 1.38629 1.38629 1.38629
24766 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24767 35 3.38655 0.13590 3.43796 2.79498 35 - -
24768 1.38629 1.38629 1.38629 1.38629
24769 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24770 36 2.91917 3.54665 0.12176 3.44709 36 - -
24771 1.38629 1.38629 1.38629 1.38629
24772 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24773 37 0.14734 3.33991 2.77563 3.23778 37 - -
24774 1.38629 1.38629 1.38629 1.38629
24775 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24776 38 3.04806 2.56931 3.09775 0.18535 38 - -
24777 1.38629 1.38629 1.38629 1.38629
24778 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24779 39 2.91917 3.54665 0.12176 3.44709 39 - -
24780 1.38629 1.38629 1.38629 1.38629
24781 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24782 40 0.14734 3.33991 2.77563 3.23778 40 - -
24783 1.38629 1.38629 1.38629 1.38629
24784 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24785 41 0.14734 3.33991 2.77563 3.23778 41 - -
24786 1.38629 1.38629 1.38629 1.38629
24787 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24788 42 2.91917 3.54665 0.12176 3.44709 42 - -
24789 1.38629 1.38629 1.38629 1.38629
24790 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24791 43 0.14734 3.33991 2.77563 3.23778 43 - -
24792 1.38629 1.38629 1.38629 1.38629
24793 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24794 44 0.14734 3.33991 2.77563 3.23778 44 - -
24795 1.38629 1.38629 1.38629 1.38629
24796 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
24797 45 3.38655 0.13590 3.43796 2.79498 45 - -
24798 1.38629 1.38629 1.38629 1.38629
24799 0.01905 3.97014 * 1.46634 0.26236 0.00000 *
24800 //
24801 HMMER3/b [3.0 | March 2010]
24802 NAME 2_5.8_Metazoa_58S_start_nine_long
24803 LENG 45
24804 ALPH DNA
24805 RF no
24806 CS no
24807 MAP yes
24808 DATE Fri Feb 24 23:22:01 2012
24809 NSEQ 23
24810 EFFN 3.501099
24811 CKSUM 1811260558
24812 STATS LOCAL MSV -7.4154 0.71931
24813 STATS LOCAL VITERBI -7.7564 0.71931
24814 STATS LOCAL FORWARD -4.2320 0.71931
24815 HMM A C G T
24816 m->m m->i m->d i->m i->i d->m d->d
24817 COMPO 1.31292 1.46337 1.22855 1.57601
24818 1.38629 1.38629 1.38629 1.38629
24819 0.03571 4.04324 4.04324 1.46634 0.26236 0.00000 *
24820 1 0.45522 2.71836 1.49555 2.58254 1 - -
24821 1.38629 1.38629 1.38629 1.38629
24822 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24823 2 0.27722 2.84765 2.55637 2.23921 2 - -
24824 1.38629 1.38629 1.38629 1.38629
24825 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24826 3 0.13479 3.43572 2.83783 3.34269 3 - -
24827 1.38629 1.38629 1.38629 1.38629
24828 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24829 4 3.14494 2.63092 3.19093 0.16986 4 - -
24830 1.38629 1.38629 1.38629 1.38629
24831 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24832 5 3.49690 0.12285 3.54360 2.87520 5 - -
24833 1.38629 1.38629 1.38629 1.38629
24834 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24835 6 3.49690 0.12285 3.54360 2.87520 6 - -
24836 1.38629 1.38629 1.38629 1.38629
24837 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24838 7 3.14494 2.63092 3.19093 0.16986 7 - -
24839 1.38629 1.38629 1.38629 1.38629
24840 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24841 8 0.29235 2.97047 1.93614 2.84810 8 - -
24842 1.38629 1.38629 1.38629 1.38629
24843 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24844 9 0.28945 2.97664 1.94643 2.85464 9 - -
24845 1.38629 1.38629 1.38629 1.38629
24846 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24847 10 0.13479 3.43572 2.83783 3.34269 10 - -
24848 1.38629 1.38629 1.38629 1.38629
24849 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24850 11 3.49690 0.12285 3.54360 2.87520 11 - -
24851 1.38629 1.38629 1.38629 1.38629
24852 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24853 12 2.98583 3.64372 0.11122 3.55427 12 - -
24854 1.38629 1.38629 1.38629 1.38629
24855 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24856 13 2.98583 3.64372 0.11122 3.55427 13 - -
24857 1.38629 1.38629 1.38629 1.38629
24858 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24859 14 3.14494 2.63092 3.19093 0.16986 14 - -
24860 1.38629 1.38629 1.38629 1.38629
24861 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24862 15 2.98583 3.64372 0.11122 3.55427 15 - -
24863 1.38629 1.38629 1.38629 1.38629
24864 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24865 16 2.98583 3.64372 0.11122 3.55427 16 - -
24866 1.38629 1.38629 1.38629 1.38629
24867 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24868 17 0.13479 3.43572 2.83783 3.34269 17 - -
24869 1.38629 1.38629 1.38629 1.38629
24870 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24871 18 3.14494 2.63092 3.19093 0.16986 18 - -
24872 1.38629 1.38629 1.38629 1.38629
24873 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24874 19 3.49690 0.12285 3.54360 2.87520 19 - -
24875 1.38629 1.38629 1.38629 1.38629
24876 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24877 20 0.13479 3.43572 2.83783 3.34269 20 - -
24878 1.38629 1.38629 1.38629 1.38629
24879 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24880 21 3.49690 0.12285 3.54360 2.87520 21 - -
24881 1.38629 1.38629 1.38629 1.38629
24882 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24883 22 3.14494 2.63092 3.19093 0.16986 22 - -
24884 1.38629 1.38629 1.38629 1.38629
24885 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24886 23 3.49690 0.12285 3.54360 2.87520 23 - -
24887 1.38629 1.38629 1.38629 1.38629
24888 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24889 24 2.98583 3.64372 0.11122 3.55427 24 - -
24890 1.38629 1.38629 1.38629 1.38629
24891 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24892 25 2.98583 3.64372 0.11122 3.55427 25 - -
24893 1.38629 1.38629 1.38629 1.38629
24894 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24895 26 3.49690 0.12285 3.54360 2.87520 26 - -
24896 1.38629 1.38629 1.38629 1.38629
24897 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24898 27 3.14494 2.63092 3.19093 0.16986 27 - -
24899 1.38629 1.38629 1.38629 1.38629
24900 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24901 28 3.49690 0.12285 3.54360 2.87520 28 - -
24902 1.38629 1.38629 1.38629 1.38629
24903 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24904 29 2.98583 3.64372 0.11122 3.55427 29 - -
24905 1.38629 1.38629 1.38629 1.38629
24906 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24907 30 3.14494 2.63092 3.19093 0.16986 30 - -
24908 1.38629 1.38629 1.38629 1.38629
24909 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24910 31 2.98583 3.64372 0.11122 3.55427 31 - -
24911 1.38629 1.38629 1.38629 1.38629
24912 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24913 32 2.98583 3.64372 0.11122 3.55427 32 - -
24914 1.38629 1.38629 1.38629 1.38629
24915 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24916 33 0.13479 3.43572 2.83783 3.34269 33 - -
24917 1.38629 1.38629 1.38629 1.38629
24918 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24919 34 3.14494 2.63092 3.19093 0.16986 34 - -
24920 1.38629 1.38629 1.38629 1.38629
24921 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24922 35 3.49690 0.12285 3.54360 2.87520 35 - -
24923 1.38629 1.38629 1.38629 1.38629
24924 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24925 36 2.98583 3.64372 0.11122 3.55427 36 - -
24926 1.38629 1.38629 1.38629 1.38629
24927 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24928 37 0.13479 3.43572 2.83783 3.34269 37 - -
24929 1.38629 1.38629 1.38629 1.38629
24930 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24931 38 3.14494 2.63092 3.19093 0.16986 38 - -
24932 1.38629 1.38629 1.38629 1.38629
24933 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24934 39 2.98583 3.64372 0.11122 3.55427 39 - -
24935 1.38629 1.38629 1.38629 1.38629
24936 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24937 40 0.13479 3.43572 2.83783 3.34269 40 - -
24938 1.38629 1.38629 1.38629 1.38629
24939 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24940 41 0.13479 3.43572 2.83783 3.34269 41 - -
24941 1.38629 1.38629 1.38629 1.38629
24942 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24943 42 2.98583 3.64372 0.11122 3.55427 42 - -
24944 1.38629 1.38629 1.38629 1.38629
24945 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24946 43 2.34521 3.30668 0.19044 3.19570 43 - -
24947 1.38629 1.38629 1.38629 1.38629
24948 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24949 44 0.13479 3.43572 2.83783 3.34269 44 - -
24950 1.38629 1.38629 1.38629 1.38629
24951 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547
24952 45 3.49690 0.12285 3.54360 2.87520 45 - -
24953 1.38629 1.38629 1.38629 1.38629
24954 0.01801 4.02555 * 1.46634 0.26236 0.00000 *
24955 //
24956 HMMER3/b [3.0 | March 2010]
24957 NAME 2_5.8_Metazoa_58S_start_nineteen_long
24958 LENG 45
24959 ALPH DNA
24960 RF no
24961 CS no
24962 MAP yes
24963 DATE Fri Feb 24 23:26:00 2012
24964 NSEQ 2
24965 EFFN 2.000000
24966 CKSUM 209311102
24967 STATS LOCAL MSV -7.6229 0.72769
24968 STATS LOCAL VITERBI -8.1432 0.72769
24969 STATS LOCAL FORWARD -3.4224 0.72769
24970 HMM A C G T
24971 m->m m->i m->d i->m i->i d->m d->d
24972 COMPO 1.39541 1.40602 1.26392 1.49340
24973 1.38629 1.38629 1.38629 1.38629
24974 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
24975 1 0.23862 2.84929 2.43386 2.70756 1 - -
24976 1.38629 1.38629 1.38629 1.38629
24977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24978 2 2.81865 0.23582 2.88868 2.35662 2 - -
24979 1.38629 1.38629 1.38629 1.38629
24980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24981 3 0.23862 2.84929 2.43386 2.70756 3 - -
24982 1.38629 1.38629 1.38629 1.38629
24983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24984 4 2.57915 2.25909 2.64442 0.28946 4 - -
24985 1.38629 1.38629 1.38629 1.38629
24986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24987 5 2.57915 2.25909 2.64442 0.28946 5 - -
24988 1.38629 1.38629 1.38629 1.38629
24989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24990 6 2.81865 0.23582 2.88868 2.35662 6 - -
24991 1.38629 1.38629 1.38629 1.38629
24992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24993 7 2.81865 0.23582 2.88868 2.35662 7 - -
24994 1.38629 1.38629 1.38629 1.38629
24995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24996 8 2.53331 3.02441 0.20344 2.88069 8 - -
24997 1.38629 1.38629 1.38629 1.38629
24998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24999 9 0.23862 2.84929 2.43386 2.70756 9 - -
25000 1.38629 1.38629 1.38629 1.38629
25001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25002 10 0.23862 2.84929 2.43386 2.70756 10 - -
25003 1.38629 1.38629 1.38629 1.38629
25004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25005 11 2.81865 0.23582 2.88868 2.35662 11 - -
25006 1.38629 1.38629 1.38629 1.38629
25007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25008 12 2.53331 3.02441 0.20344 2.88069 12 - -
25009 1.38629 1.38629 1.38629 1.38629
25010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25011 13 2.53331 3.02441 0.20344 2.88069 13 - -
25012 1.38629 1.38629 1.38629 1.38629
25013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25014 14 2.81865 0.23582 2.88868 2.35662 14 - -
25015 1.38629 1.38629 1.38629 1.38629
25016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25017 15 2.53331 3.02441 0.20344 2.88069 15 - -
25018 1.38629 1.38629 1.38629 1.38629
25019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25020 16 2.53331 3.02441 0.20344 2.88069 16 - -
25021 1.38629 1.38629 1.38629 1.38629
25022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25023 17 0.23862 2.84929 2.43386 2.70756 17 - -
25024 1.38629 1.38629 1.38629 1.38629
25025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25026 18 2.57915 2.25909 2.64442 0.28946 18 - -
25027 1.38629 1.38629 1.38629 1.38629
25028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25029 19 2.81865 0.23582 2.88868 2.35662 19 - -
25030 1.38629 1.38629 1.38629 1.38629
25031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25032 20 0.23862 2.84929 2.43386 2.70756 20 - -
25033 1.38629 1.38629 1.38629 1.38629
25034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25035 21 2.81865 0.23582 2.88868 2.35662 21 - -
25036 1.38629 1.38629 1.38629 1.38629
25037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25038 22 2.57915 2.25909 2.64442 0.28946 22 - -
25039 1.38629 1.38629 1.38629 1.38629
25040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25041 23 2.57915 2.25909 2.64442 0.28946 23 - -
25042 1.38629 1.38629 1.38629 1.38629
25043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25044 24 2.53331 3.02441 0.20344 2.88069 24 - -
25045 1.38629 1.38629 1.38629 1.38629
25046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25047 25 2.53331 3.02441 0.20344 2.88069 25 - -
25048 1.38629 1.38629 1.38629 1.38629
25049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25050 26 2.81865 0.23582 2.88868 2.35662 26 - -
25051 1.38629 1.38629 1.38629 1.38629
25052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25053 27 2.57915 2.25909 2.64442 0.28946 27 - -
25054 1.38629 1.38629 1.38629 1.38629
25055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25056 28 2.81865 0.23582 2.88868 2.35662 28 - -
25057 1.38629 1.38629 1.38629 1.38629
25058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25059 29 2.53331 3.02441 0.20344 2.88069 29 - -
25060 1.38629 1.38629 1.38629 1.38629
25061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25062 30 2.57915 2.25909 2.64442 0.28946 30 - -
25063 1.38629 1.38629 1.38629 1.38629
25064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25065 31 0.23862 2.84929 2.43386 2.70756 31 - -
25066 1.38629 1.38629 1.38629 1.38629
25067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25068 32 2.53331 3.02441 0.20344 2.88069 32 - -
25069 1.38629 1.38629 1.38629 1.38629
25070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25071 33 2.53331 3.02441 0.20344 2.88069 33 - -
25072 1.38629 1.38629 1.38629 1.38629
25073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25074 34 2.57915 2.25909 2.64442 0.28946 34 - -
25075 1.38629 1.38629 1.38629 1.38629
25076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25077 35 2.81865 0.23582 2.88868 2.35662 35 - -
25078 1.38629 1.38629 1.38629 1.38629
25079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25080 36 2.53331 3.02441 0.20344 2.88069 36 - -
25081 1.38629 1.38629 1.38629 1.38629
25082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25083 37 2.57915 2.25909 2.64442 0.28946 37 - -
25084 1.38629 1.38629 1.38629 1.38629
25085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25086 38 2.57915 2.25909 2.64442 0.28946 38 - -
25087 1.38629 1.38629 1.38629 1.38629
25088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25089 39 2.53331 3.02441 0.20344 2.88069 39 - -
25090 1.38629 1.38629 1.38629 1.38629
25091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25092 40 0.23862 2.84929 2.43386 2.70756 40 - -
25093 1.38629 1.38629 1.38629 1.38629
25094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25095 41 0.23862 2.84929 2.43386 2.70756 41 - -
25096 1.38629 1.38629 1.38629 1.38629
25097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25098 42 2.53331 3.02441 0.20344 2.88069 42 - -
25099 1.38629 1.38629 1.38629 1.38629
25100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25101 43 0.23862 2.84929 2.43386 2.70756 43 - -
25102 1.38629 1.38629 1.38629 1.38629
25103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25104 44 0.23862 2.84929 2.43386 2.70756 44 - -
25105 1.38629 1.38629 1.38629 1.38629
25106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25107 45 2.81865 0.23582 2.88868 2.35662 45 - -
25108 1.38629 1.38629 1.38629 1.38629
25109 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
25110 //
25111 HMMER3/b [3.0 | March 2010]
25112 NAME 2_5.8_Metazoa_58S_start_onea_long
25113 LENG 45
25114 ALPH DNA
25115 RF no
25116 CS no
25117 MAP yes
25118 DATE Fri Feb 24 23:11:25 2012
25119 NSEQ 2
25120 EFFN 2.000000
25121 CKSUM 3686762380
25122 STATS LOCAL MSV -7.5082 0.72766
25123 STATS LOCAL VITERBI -8.2855 0.72766
25124 STATS LOCAL FORWARD -3.8286 0.72766
25125 HMM A C G T
25126 m->m m->i m->d i->m i->i d->m d->d
25127 COMPO 1.58214 1.52906 1.11769 1.38354
25128 1.38629 1.38629 1.38629 1.38629
25129 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
25130 1 2.57915 2.25909 2.64442 0.28946 1 - -
25131 1.38629 1.38629 1.38629 1.38629
25132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25133 2 0.23862 2.84929 2.43386 2.70756 2 - -
25134 1.38629 1.38629 1.38629 1.38629
25135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25136 3 0.23862 2.84929 2.43386 2.70756 3 - -
25137 1.38629 1.38629 1.38629 1.38629
25138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25139 4 2.81865 0.23582 2.88868 2.35662 4 - -
25140 1.38629 1.38629 1.38629 1.38629
25141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25142 5 2.57915 2.25909 2.64442 0.28946 5 - -
25143 1.38629 1.38629 1.38629 1.38629
25144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25145 6 2.53331 3.02441 0.20344 2.88069 6 - -
25146 1.38629 1.38629 1.38629 1.38629
25147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25148 7 2.57915 2.25909 2.64442 0.28946 7 - -
25149 1.38629 1.38629 1.38629 1.38629
25150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25151 8 2.53331 3.02441 0.20344 2.88069 8 - -
25152 1.38629 1.38629 1.38629 1.38629
25153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25154 9 2.57915 2.25909 2.64442 0.28946 9 - -
25155 1.38629 1.38629 1.38629 1.38629
25156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25157 10 2.53331 3.02441 0.20344 2.88069 10 - -
25158 1.38629 1.38629 1.38629 1.38629
25159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25160 11 2.81865 0.23582 2.88868 2.35662 11 - -
25161 1.38629 1.38629 1.38629 1.38629
25162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25163 12 2.53331 3.02441 0.20344 2.88069 12 - -
25164 1.38629 1.38629 1.38629 1.38629
25165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25166 13 2.53331 3.02441 0.20344 2.88069 13 - -
25167 1.38629 1.38629 1.38629 1.38629
25168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25169 14 2.57915 2.25909 2.64442 0.28946 14 - -
25170 1.38629 1.38629 1.38629 1.38629
25171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25172 15 2.53331 3.02441 0.20344 2.88069 15 - -
25173 1.38629 1.38629 1.38629 1.38629
25174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25175 16 2.53331 3.02441 0.20344 2.88069 16 - -
25176 1.38629 1.38629 1.38629 1.38629
25177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25178 17 0.23862 2.84929 2.43386 2.70756 17 - -
25179 1.38629 1.38629 1.38629 1.38629
25180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25181 18 2.57915 2.25909 2.64442 0.28946 18 - -
25182 1.38629 1.38629 1.38629 1.38629
25183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25184 19 2.81865 0.23582 2.88868 2.35662 19 - -
25185 1.38629 1.38629 1.38629 1.38629
25186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25187 20 0.23862 2.84929 2.43386 2.70756 20 - -
25188 1.38629 1.38629 1.38629 1.38629
25189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25190 21 2.81865 0.23582 2.88868 2.35662 21 - -
25191 1.38629 1.38629 1.38629 1.38629
25192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25193 22 2.57915 2.25909 2.64442 0.28946 22 - -
25194 1.38629 1.38629 1.38629 1.38629
25195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25196 23 2.81865 0.23582 2.88868 2.35662 23 - -
25197 1.38629 1.38629 1.38629 1.38629
25198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25199 24 2.53331 3.02441 0.20344 2.88069 24 - -
25200 1.38629 1.38629 1.38629 1.38629
25201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25202 25 2.53331 3.02441 0.20344 2.88069 25 - -
25203 1.38629 1.38629 1.38629 1.38629
25204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25205 26 2.81865 0.23582 2.88868 2.35662 26 - -
25206 1.38629 1.38629 1.38629 1.38629
25207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25208 27 2.57915 2.25909 2.64442 0.28946 27 - -
25209 1.38629 1.38629 1.38629 1.38629
25210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25211 28 2.81865 0.23582 2.88868 2.35662 28 - -
25212 1.38629 1.38629 1.38629 1.38629
25213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25214 29 2.53331 3.02441 0.20344 2.88069 29 - -
25215 1.38629 1.38629 1.38629 1.38629
25216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25217 30 2.57915 2.25909 2.64442 0.28946 30 - -
25218 1.38629 1.38629 1.38629 1.38629
25219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25220 31 2.53331 3.02441 0.20344 2.88069 31 - -
25221 1.38629 1.38629 1.38629 1.38629
25222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25223 32 2.81865 0.23582 2.88868 2.35662 32 - -
25224 1.38629 1.38629 1.38629 1.38629
25225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25226 33 2.53331 3.02441 0.20344 2.88069 33 - -
25227 1.38629 1.38629 1.38629 1.38629
25228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25229 34 2.57915 2.25909 2.64442 0.28946 34 - -
25230 1.38629 1.38629 1.38629 1.38629
25231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25232 35 2.81865 0.23582 2.88868 2.35662 35 - -
25233 1.38629 1.38629 1.38629 1.38629
25234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25235 36 2.53331 3.02441 0.20344 2.88069 36 - -
25236 1.38629 1.38629 1.38629 1.38629
25237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25238 37 0.23862 2.84929 2.43386 2.70756 37 - -
25239 1.38629 1.38629 1.38629 1.38629
25240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25241 38 2.57915 2.25909 2.64442 0.28946 38 - -
25242 1.38629 1.38629 1.38629 1.38629
25243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25244 39 2.53331 3.02441 0.20344 2.88069 39 - -
25245 1.38629 1.38629 1.38629 1.38629
25246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25247 40 0.23862 2.84929 2.43386 2.70756 40 - -
25248 1.38629 1.38629 1.38629 1.38629
25249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25250 41 0.23862 2.84929 2.43386 2.70756 41 - -
25251 1.38629 1.38629 1.38629 1.38629
25252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25253 42 2.53331 3.02441 0.20344 2.88069 42 - -
25254 1.38629 1.38629 1.38629 1.38629
25255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25256 43 0.23862 2.84929 2.43386 2.70756 43 - -
25257 1.38629 1.38629 1.38629 1.38629
25258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25259 44 2.53331 3.02441 0.20344 2.88069 44 - -
25260 1.38629 1.38629 1.38629 1.38629
25261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25262 45 2.57915 2.25909 2.64442 0.28946 45 - -
25263 1.38629 1.38629 1.38629 1.38629
25264 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
25265 //
25266 HMMER3/b [3.0 | March 2010]
25267 NAME 2_5.8_Metazoa_58S_start_oneb_long
25268 LENG 45
25269 ALPH DNA
25270 RF no
25271 CS no
25272 MAP yes
25273 DATE Fri Feb 24 23:11:33 2012
25274 NSEQ 87
25275 EFFN 3.655975
25276 CKSUM 3510333141
25277 STATS LOCAL MSV -7.4198 0.71932
25278 STATS LOCAL VITERBI -7.6938 0.71932
25279 STATS LOCAL FORWARD -4.3590 0.71932
25280 HMM A C G T
25281 m->m m->i m->d i->m i->i d->m d->d
25282 COMPO 1.54954 1.45282 1.13873 1.45449
25283 1.38629 1.38629 1.38629 1.38629
25284 0.03475 4.07005 4.07005 1.46634 0.26236 0.00000 *
25285 1 3.54908 0.11719 3.59347 2.91269 1 - -
25286 1.38629 1.38629 1.38629 1.38629
25287 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25288 2 0.12925 3.48127 2.86717 3.39267 2 - -
25289 1.38629 1.38629 1.38629 1.38629
25290 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25291 3 0.12925 3.48127 2.86717 3.39267 3 - -
25292 1.38629 1.38629 1.38629 1.38629
25293 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25294 4 3.54908 0.11719 3.59347 2.91269 4 - -
25295 1.38629 1.38629 1.38629 1.38629
25296 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25297 5 3.19176 2.66061 3.23592 0.16291 5 - -
25298 1.38629 1.38629 1.38629 1.38629
25299 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25300 6 2.47923 0.76813 2.55103 0.98267 6 - -
25301 1.38629 1.38629 1.38629 1.38629
25302 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25303 7 3.19176 2.66061 3.23592 0.16291 7 - -
25304 1.38629 1.38629 1.38629 1.38629
25305 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25306 8 2.07585 3.16738 0.24209 3.04801 8 - -
25307 1.38629 1.38629 1.38629 1.38629
25308 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25309 9 0.36015 2.66492 2.46116 1.91401 9 - -
25310 1.38629 1.38629 1.38629 1.38629
25311 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25312 10 2.57159 3.47632 0.15254 3.37730 10 - -
25313 1.38629 1.38629 1.38629 1.38629
25314 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25315 11 3.54908 0.11719 3.59347 2.91269 11 - -
25316 1.38629 1.38629 1.38629 1.38629
25317 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25318 12 3.01675 3.68922 0.10664 3.60465 12 - -
25319 1.38629 1.38629 1.38629 1.38629
25320 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25321 13 3.01675 3.68922 0.10664 3.60465 13 - -
25322 1.38629 1.38629 1.38629 1.38629
25323 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25324 14 3.19176 2.66061 3.23592 0.16291 14 - -
25325 1.38629 1.38629 1.38629 1.38629
25326 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25327 15 3.01675 3.68922 0.10664 3.60465 15 - -
25328 1.38629 1.38629 1.38629 1.38629
25329 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25330 16 3.01675 3.68922 0.10664 3.60465 16 - -
25331 1.38629 1.38629 1.38629 1.38629
25332 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25333 17 0.12925 3.48127 2.86717 3.39267 17 - -
25334 1.38629 1.38629 1.38629 1.38629
25335 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25336 18 3.19176 2.66061 3.23592 0.16291 18 - -
25337 1.38629 1.38629 1.38629 1.38629
25338 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25339 19 3.54908 0.11719 3.59347 2.91269 19 - -
25340 1.38629 1.38629 1.38629 1.38629
25341 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25342 20 0.12925 3.48127 2.86717 3.39267 20 - -
25343 1.38629 1.38629 1.38629 1.38629
25344 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25345 21 3.54908 0.11719 3.59347 2.91269 21 - -
25346 1.38629 1.38629 1.38629 1.38629
25347 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25348 22 3.19176 2.66061 3.23592 0.16291 22 - -
25349 1.38629 1.38629 1.38629 1.38629
25350 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25351 23 3.54908 0.11719 3.59347 2.91269 23 - -
25352 1.38629 1.38629 1.38629 1.38629
25353 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25354 24 3.01675 3.68922 0.10664 3.60465 24 - -
25355 1.38629 1.38629 1.38629 1.38629
25356 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25357 25 3.01675 3.68922 0.10664 3.60465 25 - -
25358 1.38629 1.38629 1.38629 1.38629
25359 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25360 26 3.54908 0.11719 3.59347 2.91269 26 - -
25361 1.38629 1.38629 1.38629 1.38629
25362 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25363 27 3.19176 2.66061 3.23592 0.16291 27 - -
25364 1.38629 1.38629 1.38629 1.38629
25365 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25366 28 3.54908 0.11719 3.59347 2.91269 28 - -
25367 1.38629 1.38629 1.38629 1.38629
25368 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25369 29 3.01675 3.68922 0.10664 3.60465 29 - -
25370 1.38629 1.38629 1.38629 1.38629
25371 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25372 30 3.19176 2.66061 3.23592 0.16291 30 - -
25373 1.38629 1.38629 1.38629 1.38629
25374 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25375 31 3.01675 3.68922 0.10664 3.60465 31 - -
25376 1.38629 1.38629 1.38629 1.38629
25377 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25378 32 2.93056 2.06431 2.98531 0.26240 32 - -
25379 1.38629 1.38629 1.38629 1.38629
25380 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25381 33 3.01675 3.68922 0.10664 3.60465 33 - -
25382 1.38629 1.38629 1.38629 1.38629
25383 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25384 34 3.19176 2.66061 3.23592 0.16291 34 - -
25385 1.38629 1.38629 1.38629 1.38629
25386 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25387 35 3.54908 0.11719 3.59347 2.91269 35 - -
25388 1.38629 1.38629 1.38629 1.38629
25389 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25390 36 3.01675 3.68922 0.10664 3.60465 36 - -
25391 1.38629 1.38629 1.38629 1.38629
25392 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25393 37 0.12925 3.48127 2.86717 3.39267 37 - -
25394 1.38629 1.38629 1.38629 1.38629
25395 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25396 38 3.19176 2.66061 3.23592 0.16291 38 - -
25397 1.38629 1.38629 1.38629 1.38629
25398 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25399 39 3.01675 3.68922 0.10664 3.60465 39 - -
25400 1.38629 1.38629 1.38629 1.38629
25401 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25402 40 0.12925 3.48127 2.86717 3.39267 40 - -
25403 1.38629 1.38629 1.38629 1.38629
25404 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25405 41 0.12925 3.48127 2.86717 3.39267 41 - -
25406 1.38629 1.38629 1.38629 1.38629
25407 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25408 42 3.01675 3.68922 0.10664 3.60465 42 - -
25409 1.38629 1.38629 1.38629 1.38629
25410 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25411 43 0.12925 3.48127 2.86717 3.39267 43 - -
25412 1.38629 1.38629 1.38629 1.38629
25413 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25414 44 3.01675 3.68922 0.10664 3.60465 44 - -
25415 1.38629 1.38629 1.38629 1.38629
25416 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547
25417 45 2.51322 0.66750 2.58481 1.10686 45 - -
25418 1.38629 1.38629 1.38629 1.38629
25419 0.01753 4.05282 * 1.46634 0.26236 0.00000 *
25420 //
25421 HMMER3/b [3.0 | March 2010]
25422 NAME 2_5.8_Metazoa_58S_start_onec_long
25423 LENG 45
25424 ALPH DNA
25425 RF no
25426 CS no
25427 MAP yes
25428 DATE Fri Feb 24 23:11:44 2012
25429 NSEQ 10
25430 EFFN 3.227539
25431 CKSUM 1757016814
25432 STATS LOCAL MSV -7.9412 0.71930
25433 STATS LOCAL VITERBI -7.6707 0.71930
25434 STATS LOCAL FORWARD -4.0766 0.71930
25435 HMM A C G T
25436 m->m m->i m->d i->m i->i d->m d->d
25437 COMPO 1.40323 1.39009 1.31591 1.44005
25438 1.38629 1.38629 1.38629 1.38629
25439 0.03755 3.99407 3.99407 1.46634 0.26236 0.00000 *
25440 1 3.39741 0.13455 3.44837 2.80294 1 - -
25441 1.38629 1.38629 1.38629 1.38629
25442 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25443 2 0.14605 3.34931 2.78177 3.24806 2 - -
25444 1.38629 1.38629 1.38629 1.38629
25445 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25446 3 0.14605 3.34931 2.78177 3.24806 3 - -
25447 1.38629 1.38629 1.38629 1.38629
25448 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25449 4 3.39741 0.13455 3.44837 2.80294 4 - -
25450 1.38629 1.38629 1.38629 1.38629
25451 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25452 5 3.05748 2.57532 3.10682 0.18378 5 - -
25453 1.38629 1.38629 1.38629 1.38629
25454 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25455 6 3.39741 0.13455 3.44837 2.80294 6 - -
25456 1.38629 1.38629 1.38629 1.38629
25457 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25458 7 3.39741 0.13455 3.44837 2.80294 7 - -
25459 1.38629 1.38629 1.38629 1.38629
25460 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25461 8 0.14605 3.34931 2.78177 3.24806 8 - -
25462 1.38629 1.38629 1.38629 1.38629
25463 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25464 9 3.05748 2.57532 3.10682 0.18378 9 - -
25465 1.38629 1.38629 1.38629 1.38629
25466 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25467 10 2.92582 3.55626 0.12066 3.45768 10 - -
25468 1.38629 1.38629 1.38629 1.38629
25469 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25470 11 3.05748 2.57532 3.10682 0.18378 11 - -
25471 1.38629 1.38629 1.38629 1.38629
25472 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25473 12 2.92582 3.55626 0.12066 3.45768 12 - -
25474 1.38629 1.38629 1.38629 1.38629
25475 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25476 13 2.92582 3.55626 0.12066 3.45768 13 - -
25477 1.38629 1.38629 1.38629 1.38629
25478 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25479 14 3.05748 2.57532 3.10682 0.18378 14 - -
25480 1.38629 1.38629 1.38629 1.38629
25481 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25482 15 2.92582 3.55626 0.12066 3.45768 15 - -
25483 1.38629 1.38629 1.38629 1.38629
25484 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25485 16 2.92582 3.55626 0.12066 3.45768 16 - -
25486 1.38629 1.38629 1.38629 1.38629
25487 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25488 17 0.14605 3.34931 2.78177 3.24806 17 - -
25489 1.38629 1.38629 1.38629 1.38629
25490 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25491 18 3.05748 2.57532 3.10682 0.18378 18 - -
25492 1.38629 1.38629 1.38629 1.38629
25493 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25494 19 3.39741 0.13455 3.44837 2.80294 19 - -
25495 1.38629 1.38629 1.38629 1.38629
25496 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25497 20 0.14605 3.34931 2.78177 3.24806 20 - -
25498 1.38629 1.38629 1.38629 1.38629
25499 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25500 21 3.39741 0.13455 3.44837 2.80294 21 - -
25501 1.38629 1.38629 1.38629 1.38629
25502 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25503 22 3.05748 2.57532 3.10682 0.18378 22 - -
25504 1.38629 1.38629 1.38629 1.38629
25505 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25506 23 3.39741 0.13455 3.44837 2.80294 23 - -
25507 1.38629 1.38629 1.38629 1.38629
25508 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25509 24 2.92582 3.55626 0.12066 3.45768 24 - -
25510 1.38629 1.38629 1.38629 1.38629
25511 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25512 25 2.92582 3.55626 0.12066 3.45768 25 - -
25513 1.38629 1.38629 1.38629 1.38629
25514 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25515 26 3.39741 0.13455 3.44837 2.80294 26 - -
25516 1.38629 1.38629 1.38629 1.38629
25517 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25518 27 3.05748 2.57532 3.10682 0.18378 27 - -
25519 1.38629 1.38629 1.38629 1.38629
25520 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25521 28 3.39741 0.13455 3.44837 2.80294 28 - -
25522 1.38629 1.38629 1.38629 1.38629
25523 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25524 29 0.14605 3.34931 2.78177 3.24806 29 - -
25525 1.38629 1.38629 1.38629 1.38629
25526 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25527 30 3.39741 0.13455 3.44837 2.80294 30 - -
25528 1.38629 1.38629 1.38629 1.38629
25529 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25530 31 2.92582 3.55626 0.12066 3.45768 31 - -
25531 1.38629 1.38629 1.38629 1.38629
25532 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25533 32 3.05748 2.57532 3.10682 0.18378 32 - -
25534 1.38629 1.38629 1.38629 1.38629
25535 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25536 33 0.14605 3.34931 2.78177 3.24806 33 - -
25537 1.38629 1.38629 1.38629 1.38629
25538 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25539 34 3.05748 2.57532 3.10682 0.18378 34 - -
25540 1.38629 1.38629 1.38629 1.38629
25541 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25542 35 3.39741 0.13455 3.44837 2.80294 35 - -
25543 1.38629 1.38629 1.38629 1.38629
25544 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25545 36 2.92582 3.55626 0.12066 3.45768 36 - -
25546 1.38629 1.38629 1.38629 1.38629
25547 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25548 37 0.14605 3.34931 2.78177 3.24806 37 - -
25549 1.38629 1.38629 1.38629 1.38629
25550 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25551 38 3.05748 2.57532 3.10682 0.18378 38 - -
25552 1.38629 1.38629 1.38629 1.38629
25553 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25554 39 2.92582 3.55626 0.12066 3.45768 39 - -
25555 1.38629 1.38629 1.38629 1.38629
25556 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25557 40 0.14605 3.34931 2.78177 3.24806 40 - -
25558 1.38629 1.38629 1.38629 1.38629
25559 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25560 41 0.14605 3.34931 2.78177 3.24806 41 - -
25561 1.38629 1.38629 1.38629 1.38629
25562 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25563 42 2.92582 3.55626 0.12066 3.45768 42 - -
25564 1.38629 1.38629 1.38629 1.38629
25565 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25566 43 0.14605 3.34931 2.78177 3.24806 43 - -
25567 1.38629 1.38629 1.38629 1.38629
25568 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25569 44 2.92582 3.55626 0.12066 3.45768 44 - -
25570 1.38629 1.38629 1.38629 1.38629
25571 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
25572 45 3.05748 2.57532 3.10682 0.18378 45 - -
25573 1.38629 1.38629 1.38629 1.38629
25574 0.01895 3.97547 * 1.46634 0.26236 0.00000 *
25575 //
25576 HMMER3/b [3.0 | March 2010]
25577 NAME 2_5.8_Metazoa_58S_start_oned_long
25578 LENG 45
25579 ALPH DNA
25580 RF no
25581 CS no
25582 MAP yes
25583 DATE Fri Feb 24 23:11:50 2012
25584 NSEQ 17
25585 EFFN 3.291260
25586 CKSUM 196763882
25587 STATS LOCAL MSV -8.0536 0.71933
25588 STATS LOCAL VITERBI -7.7352 0.71933
25589 STATS LOCAL FORWARD -3.8207 0.71933
25590 HMM A C G T
25591 m->m m->i m->d i->m i->i d->m d->d
25592 COMPO 1.38860 1.39070 1.27186 1.50794
25593 1.38629 1.38629 1.38629 1.38629
25594 0.03710 4.00574 4.00574 1.46634 0.26236 0.00000 *
25595 1 3.42145 0.13161 3.47140 2.82050 1 - -
25596 1.38629 1.38629 1.38629 1.38629
25597 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25598 2 0.14324 3.37015 2.79535 3.27086 2 - -
25599 1.38629 1.38629 1.38629 1.38629
25600 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25601 3 0.14324 3.37015 2.79535 3.27086 3 - -
25602 1.38629 1.38629 1.38629 1.38629
25603 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25604 4 3.42145 0.13161 3.47140 2.82050 4 - -
25605 1.38629 1.38629 1.38629 1.38629
25606 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25607 5 3.07841 2.58865 3.12696 0.18033 5 - -
25608 1.38629 1.38629 1.38629 1.38629
25609 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25610 6 3.42145 0.13161 3.47140 2.82050 6 - -
25611 1.38629 1.38629 1.38629 1.38629
25612 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25613 7 3.42145 0.13161 3.47140 2.82050 7 - -
25614 1.38629 1.38629 1.38629 1.38629
25615 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25616 8 0.14324 3.37015 2.79535 3.27086 8 - -
25617 1.38629 1.38629 1.38629 1.38629
25618 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25619 9 3.07841 2.58865 3.12696 0.18033 9 - -
25620 1.38629 1.38629 1.38629 1.38629
25621 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25622 10 2.94046 3.57748 0.11829 3.48109 10 - -
25623 1.38629 1.38629 1.38629 1.38629
25624 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25625 11 3.07841 2.58865 3.12696 0.18033 11 - -
25626 1.38629 1.38629 1.38629 1.38629
25627 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25628 12 2.94046 3.57748 0.11829 3.48109 12 - -
25629 1.38629 1.38629 1.38629 1.38629
25630 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25631 13 2.94046 3.57748 0.11829 3.48109 13 - -
25632 1.38629 1.38629 1.38629 1.38629
25633 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25634 14 3.07841 2.58865 3.12696 0.18033 14 - -
25635 1.38629 1.38629 1.38629 1.38629
25636 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25637 15 2.94046 3.57748 0.11829 3.48109 15 - -
25638 1.38629 1.38629 1.38629 1.38629
25639 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25640 16 2.94046 3.57748 0.11829 3.48109 16 - -
25641 1.38629 1.38629 1.38629 1.38629
25642 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25643 17 0.14324 3.37015 2.79535 3.27086 17 - -
25644 1.38629 1.38629 1.38629 1.38629
25645 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25646 18 3.07841 2.58865 3.12696 0.18033 18 - -
25647 1.38629 1.38629 1.38629 1.38629
25648 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25649 19 3.42145 0.13161 3.47140 2.82050 19 - -
25650 1.38629 1.38629 1.38629 1.38629
25651 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25652 20 0.14324 3.37015 2.79535 3.27086 20 - -
25653 1.38629 1.38629 1.38629 1.38629
25654 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25655 21 3.42145 0.13161 3.47140 2.82050 21 - -
25656 1.38629 1.38629 1.38629 1.38629
25657 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25658 22 3.07841 2.58865 3.12696 0.18033 22 - -
25659 1.38629 1.38629 1.38629 1.38629
25660 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25661 23 3.42145 0.13161 3.47140 2.82050 23 - -
25662 1.38629 1.38629 1.38629 1.38629
25663 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25664 24 2.94046 3.57748 0.11829 3.48109 24 - -
25665 1.38629 1.38629 1.38629 1.38629
25666 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25667 25 2.94046 3.57748 0.11829 3.48109 25 - -
25668 1.38629 1.38629 1.38629 1.38629
25669 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25670 26 3.42145 0.13161 3.47140 2.82050 26 - -
25671 1.38629 1.38629 1.38629 1.38629
25672 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25673 27 3.07841 2.58865 3.12696 0.18033 27 - -
25674 1.38629 1.38629 1.38629 1.38629
25675 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25676 28 3.42145 0.13161 3.47140 2.82050 28 - -
25677 1.38629 1.38629 1.38629 1.38629
25678 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25679 29 0.14324 3.37015 2.79535 3.27086 29 - -
25680 1.38629 1.38629 1.38629 1.38629
25681 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25682 30 3.42145 0.13161 3.47140 2.82050 30 - -
25683 1.38629 1.38629 1.38629 1.38629
25684 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25685 31 2.94046 3.57748 0.11829 3.48109 31 - -
25686 1.38629 1.38629 1.38629 1.38629
25687 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25688 32 3.07841 2.58865 3.12696 0.18033 32 - -
25689 1.38629 1.38629 1.38629 1.38629
25690 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25691 33 1.49206 2.71976 0.45663 2.57989 33 - -
25692 1.38629 1.38629 1.38629 1.38629
25693 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25694 34 0.14324 3.37015 2.79535 3.27086 34 - -
25695 1.38629 1.38629 1.38629 1.38629
25696 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25697 35 3.42145 0.13161 3.47140 2.82050 35 - -
25698 1.38629 1.38629 1.38629 1.38629
25699 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25700 36 2.94046 3.57748 0.11829 3.48109 36 - -
25701 1.38629 1.38629 1.38629 1.38629
25702 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25703 37 0.14324 3.37015 2.79535 3.27086 37 - -
25704 1.38629 1.38629 1.38629 1.38629
25705 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25706 38 3.07841 2.58865 3.12696 0.18033 38 - -
25707 1.38629 1.38629 1.38629 1.38629
25708 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25709 39 2.94046 3.57748 0.11829 3.48109 39 - -
25710 1.38629 1.38629 1.38629 1.38629
25711 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25712 40 0.14324 3.37015 2.79535 3.27086 40 - -
25713 1.38629 1.38629 1.38629 1.38629
25714 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25715 41 0.14324 3.37015 2.79535 3.27086 41 - -
25716 1.38629 1.38629 1.38629 1.38629
25717 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25718 42 2.94046 3.57748 0.11829 3.48109 42 - -
25719 1.38629 1.38629 1.38629 1.38629
25720 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25721 43 0.14324 3.37015 2.79535 3.27086 43 - -
25722 1.38629 1.38629 1.38629 1.38629
25723 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25724 44 2.94046 3.57748 0.11829 3.48109 44 - -
25725 1.38629 1.38629 1.38629 1.38629
25726 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547
25727 45 3.07841 2.58865 3.12696 0.18033 45 - -
25728 1.38629 1.38629 1.38629 1.38629
25729 0.01872 3.98736 * 1.46634 0.26236 0.00000 *
25730 //
25731 HMMER3/b [3.0 | March 2010]
25732 NAME 2_5.8_Metazoa_58S_start_onee_long
25733 LENG 45
25734 ALPH DNA
25735 RF no
25736 CS no
25737 MAP yes
25738 DATE Fri Feb 24 23:11:59 2012
25739 NSEQ 34
25740 EFFN 3.482178
25741 CKSUM 4148185765
25742 STATS LOCAL MSV -7.2926 0.71932
25743 STATS LOCAL VITERBI -7.6395 0.71932
25744 STATS LOCAL FORWARD -4.1414 0.71932
25745 HMM A C G T
25746 m->m m->i m->d i->m i->i d->m d->d
25747 COMPO 1.39466 1.43022 1.30565 1.41953
25748 1.38629 1.38629 1.38629 1.38629
25749 0.03583 4.03992 4.03992 1.46634 0.26236 0.00000 *
25750 1 3.22523 0.18506 3.28084 2.39033 1 - -
25751 1.38629 1.38629 1.38629 1.38629
25752 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25753 2 0.13550 3.42999 2.83413 3.33641 2 - -
25754 1.38629 1.38629 1.38629 1.38629
25755 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25756 3 0.13550 3.42999 2.83413 3.33641 3 - -
25757 1.38629 1.38629 1.38629 1.38629
25758 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25759 4 3.49032 0.12359 3.53732 2.87046 4 - -
25760 1.38629 1.38629 1.38629 1.38629
25761 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25762 5 3.13909 2.62721 3.18530 0.17075 5 - -
25763 1.38629 1.38629 1.38629 1.38629
25764 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25765 6 2.40864 0.46941 2.12525 1.80006 6 - -
25766 1.38629 1.38629 1.38629 1.38629
25767 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25768 7 2.74277 0.38496 2.81075 1.63490 7 - -
25769 1.38629 1.38629 1.38629 1.38629
25770 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25771 8 0.13550 3.42999 2.83413 3.33641 8 - -
25772 1.38629 1.38629 1.38629 1.38629
25773 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25774 9 3.13909 2.62721 3.18530 0.17075 9 - -
25775 1.38629 1.38629 1.38629 1.38629
25776 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25777 10 2.98191 3.63797 0.11181 3.54791 10 - -
25778 1.38629 1.38629 1.38629 1.38629
25779 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25780 11 3.13909 2.62721 3.18530 0.17075 11 - -
25781 1.38629 1.38629 1.38629 1.38629
25782 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25783 12 2.98191 3.63797 0.11181 3.54791 12 - -
25784 1.38629 1.38629 1.38629 1.38629
25785 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25786 13 2.98191 3.63797 0.11181 3.54791 13 - -
25787 1.38629 1.38629 1.38629 1.38629
25788 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25789 14 3.13909 2.62721 3.18530 0.17075 14 - -
25790 1.38629 1.38629 1.38629 1.38629
25791 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25792 15 2.98191 3.63797 0.11181 3.54791 15 - -
25793 1.38629 1.38629 1.38629 1.38629
25794 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25795 16 2.98191 3.63797 0.11181 3.54791 16 - -
25796 1.38629 1.38629 1.38629 1.38629
25797 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25798 17 0.13550 3.42999 2.83413 3.33641 17 - -
25799 1.38629 1.38629 1.38629 1.38629
25800 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25801 18 3.13909 2.62721 3.18530 0.17075 18 - -
25802 1.38629 1.38629 1.38629 1.38629
25803 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25804 19 3.49032 0.12359 3.53732 2.87046 19 - -
25805 1.38629 1.38629 1.38629 1.38629
25806 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25807 20 0.13550 3.42999 2.83413 3.33641 20 - -
25808 1.38629 1.38629 1.38629 1.38629
25809 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25810 21 3.49032 0.12359 3.53732 2.87046 21 - -
25811 1.38629 1.38629 1.38629 1.38629
25812 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25813 22 3.13909 2.62721 3.18530 0.17075 22 - -
25814 1.38629 1.38629 1.38629 1.38629
25815 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25816 23 3.49032 0.12359 3.53732 2.87046 23 - -
25817 1.38629 1.38629 1.38629 1.38629
25818 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25819 24 2.98191 3.63797 0.11181 3.54791 24 - -
25820 1.38629 1.38629 1.38629 1.38629
25821 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25822 25 2.98191 3.63797 0.11181 3.54791 25 - -
25823 1.38629 1.38629 1.38629 1.38629
25824 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25825 26 3.49032 0.12359 3.53732 2.87046 26 - -
25826 1.38629 1.38629 1.38629 1.38629
25827 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25828 27 3.13909 2.62721 3.18530 0.17075 27 - -
25829 1.38629 1.38629 1.38629 1.38629
25830 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25831 28 3.49032 0.12359 3.53732 2.87046 28 - -
25832 1.38629 1.38629 1.38629 1.38629
25833 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25834 29 0.13550 3.42999 2.83413 3.33641 29 - -
25835 1.38629 1.38629 1.38629 1.38629
25836 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25837 30 3.49032 0.12359 3.53732 2.87046 30 - -
25838 1.38629 1.38629 1.38629 1.38629
25839 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25840 31 2.98191 3.63797 0.11181 3.54791 31 - -
25841 1.38629 1.38629 1.38629 1.38629
25842 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25843 32 2.96850 2.22834 3.02126 0.23298 32 - -
25844 1.38629 1.38629 1.38629 1.38629
25845 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25846 33 0.13550 3.42999 2.83413 3.33641 33 - -
25847 1.38629 1.38629 1.38629 1.38629
25848 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25849 34 3.13909 2.62721 3.18530 0.17075 34 - -
25850 1.38629 1.38629 1.38629 1.38629
25851 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25852 35 3.49032 0.12359 3.53732 2.87046 35 - -
25853 1.38629 1.38629 1.38629 1.38629
25854 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25855 36 2.98191 3.63797 0.11181 3.54791 36 - -
25856 1.38629 1.38629 1.38629 1.38629
25857 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25858 37 0.13550 3.42999 2.83413 3.33641 37 - -
25859 1.38629 1.38629 1.38629 1.38629
25860 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25861 38 3.13909 2.62721 3.18530 0.17075 38 - -
25862 1.38629 1.38629 1.38629 1.38629
25863 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25864 39 2.98191 3.63797 0.11181 3.54791 39 - -
25865 1.38629 1.38629 1.38629 1.38629
25866 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25867 40 0.13550 3.42999 2.83413 3.33641 40 - -
25868 1.38629 1.38629 1.38629 1.38629
25869 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25870 41 0.13550 3.42999 2.83413 3.33641 41 - -
25871 1.38629 1.38629 1.38629 1.38629
25872 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25873 42 2.98191 3.63797 0.11181 3.54791 42 - -
25874 1.38629 1.38629 1.38629 1.38629
25875 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25876 43 0.13550 3.42999 2.83413 3.33641 43 - -
25877 1.38629 1.38629 1.38629 1.38629
25878 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25879 44 2.98191 3.63797 0.11181 3.54791 44 - -
25880 1.38629 1.38629 1.38629 1.38629
25881 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547
25882 45 3.13909 2.62721 3.18530 0.17075 45 - -
25883 1.38629 1.38629 1.38629 1.38629
25884 0.01808 4.02216 * 1.46634 0.26236 0.00000 *
25885 //
25886 HMMER3/b [3.0 | March 2010]
25887 NAME 2_5.8_Metazoa_58S_start_onef_long
25888 LENG 45
25889 ALPH DNA
25890 RF no
25891 CS no
25892 MAP yes
25893 DATE Fri Feb 24 23:12:05 2012
25894 NSEQ 2
25895 EFFN 2.000000
25896 CKSUM 2429089339
25897 STATS LOCAL MSV -7.4875 0.72740
25898 STATS LOCAL VITERBI -8.1144 0.72740
25899 STATS LOCAL FORWARD -3.7271 0.72740
25900 HMM A C G T
25901 m->m m->i m->d i->m i->i d->m d->d
25902 COMPO 1.51972 1.35153 1.16664 1.55604
25903 1.38629 1.38629 1.38629 1.38629
25904 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
25905 1 2.81865 0.23582 2.88868 2.35662 1 - -
25906 1.38629 1.38629 1.38629 1.38629
25907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25908 2 0.23862 2.84929 2.43386 2.70756 2 - -
25909 1.38629 1.38629 1.38629 1.38629
25910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25911 3 0.23862 2.84929 2.43386 2.70756 3 - -
25912 1.38629 1.38629 1.38629 1.38629
25913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25914 4 2.81865 0.23582 2.88868 2.35662 4 - -
25915 1.38629 1.38629 1.38629 1.38629
25916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25917 5 2.57915 2.25909 2.64442 0.28946 5 - -
25918 1.38629 1.38629 1.38629 1.38629
25919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25920 6 2.81865 0.23582 2.88868 2.35662 6 - -
25921 1.38629 1.38629 1.38629 1.38629
25922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25923 7 2.57915 2.25909 2.64442 0.28946 7 - -
25924 1.38629 1.38629 1.38629 1.38629
25925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25926 8 0.23862 2.84929 2.43386 2.70756 8 - -
25927 1.38629 1.38629 1.38629 1.38629
25928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25929 9 2.53331 3.02441 0.20344 2.88069 9 - -
25930 1.38629 1.38629 1.38629 1.38629
25931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25932 10 2.53331 3.02441 0.20344 2.88069 10 - -
25933 1.38629 1.38629 1.38629 1.38629
25934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25935 11 2.81865 0.23582 2.88868 2.35662 11 - -
25936 1.38629 1.38629 1.38629 1.38629
25937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25938 12 2.53331 3.02441 0.20344 2.88069 12 - -
25939 1.38629 1.38629 1.38629 1.38629
25940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25941 13 2.53331 3.02441 0.20344 2.88069 13 - -
25942 1.38629 1.38629 1.38629 1.38629
25943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25944 14 2.57915 2.25909 2.64442 0.28946 14 - -
25945 1.38629 1.38629 1.38629 1.38629
25946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25947 15 2.53331 3.02441 0.20344 2.88069 15 - -
25948 1.38629 1.38629 1.38629 1.38629
25949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25950 16 2.53331 3.02441 0.20344 2.88069 16 - -
25951 1.38629 1.38629 1.38629 1.38629
25952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25953 17 0.23862 2.84929 2.43386 2.70756 17 - -
25954 1.38629 1.38629 1.38629 1.38629
25955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25956 18 2.57915 2.25909 2.64442 0.28946 18 - -
25957 1.38629 1.38629 1.38629 1.38629
25958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25959 19 2.81865 0.23582 2.88868 2.35662 19 - -
25960 1.38629 1.38629 1.38629 1.38629
25961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25962 20 0.23862 2.84929 2.43386 2.70756 20 - -
25963 1.38629 1.38629 1.38629 1.38629
25964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25965 21 2.81865 0.23582 2.88868 2.35662 21 - -
25966 1.38629 1.38629 1.38629 1.38629
25967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25968 22 2.57915 2.25909 2.64442 0.28946 22 - -
25969 1.38629 1.38629 1.38629 1.38629
25970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25971 23 2.81865 0.23582 2.88868 2.35662 23 - -
25972 1.38629 1.38629 1.38629 1.38629
25973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25974 24 2.53331 3.02441 0.20344 2.88069 24 - -
25975 1.38629 1.38629 1.38629 1.38629
25976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25977 25 2.53331 3.02441 0.20344 2.88069 25 - -
25978 1.38629 1.38629 1.38629 1.38629
25979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25980 26 2.81865 0.23582 2.88868 2.35662 26 - -
25981 1.38629 1.38629 1.38629 1.38629
25982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25983 27 2.57915 2.25909 2.64442 0.28946 27 - -
25984 1.38629 1.38629 1.38629 1.38629
25985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25986 28 2.81865 0.23582 2.88868 2.35662 28 - -
25987 1.38629 1.38629 1.38629 1.38629
25988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25989 29 2.53331 3.02441 0.20344 2.88069 29 - -
25990 1.38629 1.38629 1.38629 1.38629
25991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25992 30 2.57915 2.25909 2.64442 0.28946 30 - -
25993 1.38629 1.38629 1.38629 1.38629
25994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25995 31 2.53331 3.02441 0.20344 2.88069 31 - -
25996 1.38629 1.38629 1.38629 1.38629
25997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25998 32 2.81865 0.23582 2.88868 2.35662 32 - -
25999 1.38629 1.38629 1.38629 1.38629
26000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26001 33 2.53331 3.02441 0.20344 2.88069 33 - -
26002 1.38629 1.38629 1.38629 1.38629
26003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26004 34 2.57915 2.25909 2.64442 0.28946 34 - -
26005 1.38629 1.38629 1.38629 1.38629
26006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26007 35 2.81865 0.23582 2.88868 2.35662 35 - -
26008 1.38629 1.38629 1.38629 1.38629
26009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26010 36 2.53331 3.02441 0.20344 2.88069 36 - -
26011 1.38629 1.38629 1.38629 1.38629
26012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26013 37 0.23862 2.84929 2.43386 2.70756 37 - -
26014 1.38629 1.38629 1.38629 1.38629
26015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26016 38 2.57915 2.25909 2.64442 0.28946 38 - -
26017 1.38629 1.38629 1.38629 1.38629
26018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26019 39 2.53331 3.02441 0.20344 2.88069 39 - -
26020 1.38629 1.38629 1.38629 1.38629
26021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26022 40 0.23862 2.84929 2.43386 2.70756 40 - -
26023 1.38629 1.38629 1.38629 1.38629
26024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26025 41 0.23862 2.84929 2.43386 2.70756 41 - -
26026 1.38629 1.38629 1.38629 1.38629
26027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26028 42 2.53331 3.02441 0.20344 2.88069 42 - -
26029 1.38629 1.38629 1.38629 1.38629
26030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26031 43 0.23862 2.84929 2.43386 2.70756 43 - -
26032 1.38629 1.38629 1.38629 1.38629
26033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26034 44 2.53331 3.02441 0.20344 2.88069 44 - -
26035 1.38629 1.38629 1.38629 1.38629
26036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26037 45 2.81865 0.23582 2.88868 2.35662 45 - -
26038 1.38629 1.38629 1.38629 1.38629
26039 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
26040 //
26041 HMMER3/b [3.0 | March 2010]
26042 NAME 2_5.8_Metazoa_58S_start_oneg_long
26043 LENG 45
26044 ALPH DNA
26045 RF no
26046 CS no
26047 MAP yes
26048 DATE Fri Feb 24 23:12:20 2012
26049 NSEQ 3
26050 EFFN 3.000000
26051 CKSUM 3162836829
26052 STATS LOCAL MSV -8.0248 0.72040
26053 STATS LOCAL VITERBI -7.6955 0.72040
26054 STATS LOCAL FORWARD -4.0851 0.72040
26055 HMM A C G T
26056 m->m m->i m->d i->m i->i d->m d->d
26057 COMPO 1.22259 1.32320 1.60338 1.43533
26058 1.38629 1.38629 1.38629 1.38629
26059 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
26060 1 3.30705 0.14631 3.36166 2.73626 1 - -
26061 1.38629 1.38629 1.38629 1.38629
26062 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26063 2 0.15719 3.27118 2.73043 3.16274 2 - -
26064 1.38629 1.38629 1.38629 1.38629
26065 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26066 3 0.15719 3.27118 2.73043 3.16274 3 - -
26067 1.38629 1.38629 1.38629 1.38629
26068 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26069 4 3.30705 0.14631 3.36166 2.73626 4 - -
26070 1.38629 1.38629 1.38629 1.38629
26071 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26072 5 2.97980 2.52563 3.03204 0.19727 5 - -
26073 1.38629 1.38629 1.38629 1.38629
26074 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26075 6 3.30705 0.14631 3.36166 2.73626 6 - -
26076 1.38629 1.38629 1.38629 1.38629
26077 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26078 7 2.97980 2.52563 3.03204 0.19727 7 - -
26079 1.38629 1.38629 1.38629 1.38629
26080 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26081 8 2.97980 2.52563 3.03204 0.19727 8 - -
26082 1.38629 1.38629 1.38629 1.38629
26083 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26084 9 0.15719 3.27118 2.73043 3.16274 9 - -
26085 1.38629 1.38629 1.38629 1.38629
26086 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26087 10 3.30705 0.14631 3.36166 2.73626 10 - -
26088 1.38629 1.38629 1.38629 1.38629
26089 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26090 11 2.97980 2.52563 3.03204 0.19727 11 - -
26091 1.38629 1.38629 1.38629 1.38629
26092 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26093 12 2.86982 3.47591 0.13017 3.36931 12 - -
26094 1.38629 1.38629 1.38629 1.38629
26095 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26096 13 2.86982 3.47591 0.13017 3.36931 13 - -
26097 1.38629 1.38629 1.38629 1.38629
26098 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26099 14 2.97980 2.52563 3.03204 0.19727 14 - -
26100 1.38629 1.38629 1.38629 1.38629
26101 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26102 15 0.15719 3.27118 2.73043 3.16274 15 - -
26103 1.38629 1.38629 1.38629 1.38629
26104 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26105 16 0.15719 3.27118 2.73043 3.16274 16 - -
26106 1.38629 1.38629 1.38629 1.38629
26107 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26108 17 0.15719 3.27118 2.73043 3.16274 17 - -
26109 1.38629 1.38629 1.38629 1.38629
26110 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26111 18 2.97980 2.52563 3.03204 0.19727 18 - -
26112 1.38629 1.38629 1.38629 1.38629
26113 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26114 19 3.30705 0.14631 3.36166 2.73626 19 - -
26115 1.38629 1.38629 1.38629 1.38629
26116 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26117 20 0.15719 3.27118 2.73043 3.16274 20 - -
26118 1.38629 1.38629 1.38629 1.38629
26119 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26120 21 3.30705 0.14631 3.36166 2.73626 21 - -
26121 1.38629 1.38629 1.38629 1.38629
26122 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26123 22 2.97980 2.52563 3.03204 0.19727 22 - -
26124 1.38629 1.38629 1.38629 1.38629
26125 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26126 23 3.30705 0.14631 3.36166 2.73626 23 - -
26127 1.38629 1.38629 1.38629 1.38629
26128 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26129 24 2.86982 3.47591 0.13017 3.36931 24 - -
26130 1.38629 1.38629 1.38629 1.38629
26131 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26132 25 2.86982 3.47591 0.13017 3.36931 25 - -
26133 1.38629 1.38629 1.38629 1.38629
26134 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26135 26 3.30705 0.14631 3.36166 2.73626 26 - -
26136 1.38629 1.38629 1.38629 1.38629
26137 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26138 27 2.97980 2.52563 3.03204 0.19727 27 - -
26139 1.38629 1.38629 1.38629 1.38629
26140 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26141 28 3.30705 0.14631 3.36166 2.73626 28 - -
26142 1.38629 1.38629 1.38629 1.38629
26143 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26144 29 0.15719 3.27118 2.73043 3.16274 29 - -
26145 1.38629 1.38629 1.38629 1.38629
26146 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26147 30 2.97980 2.52563 3.03204 0.19727 30 - -
26148 1.38629 1.38629 1.38629 1.38629
26149 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26150 31 2.86982 3.47591 0.13017 3.36931 31 - -
26151 1.38629 1.38629 1.38629 1.38629
26152 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26153 32 3.30705 0.14631 3.36166 2.73626 32 - -
26154 1.38629 1.38629 1.38629 1.38629
26155 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26156 33 0.15719 3.27118 2.73043 3.16274 33 - -
26157 1.38629 1.38629 1.38629 1.38629
26158 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26159 34 2.97980 2.52563 3.03204 0.19727 34 - -
26160 1.38629 1.38629 1.38629 1.38629
26161 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26162 35 3.30705 0.14631 3.36166 2.73626 35 - -
26163 1.38629 1.38629 1.38629 1.38629
26164 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26165 36 2.86982 3.47591 0.13017 3.36931 36 - -
26166 1.38629 1.38629 1.38629 1.38629
26167 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26168 37 0.15719 3.27118 2.73043 3.16274 37 - -
26169 1.38629 1.38629 1.38629 1.38629
26170 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26171 38 2.97980 2.52563 3.03204 0.19727 38 - -
26172 1.38629 1.38629 1.38629 1.38629
26173 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26174 39 2.86982 3.47591 0.13017 3.36931 39 - -
26175 1.38629 1.38629 1.38629 1.38629
26176 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26177 40 0.15719 3.27118 2.73043 3.16274 40 - -
26178 1.38629 1.38629 1.38629 1.38629
26179 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26180 41 0.15719 3.27118 2.73043 3.16274 41 - -
26181 1.38629 1.38629 1.38629 1.38629
26182 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26183 42 2.86982 3.47591 0.13017 3.36931 42 - -
26184 1.38629 1.38629 1.38629 1.38629
26185 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26186 43 0.15719 3.27118 2.73043 3.16274 43 - -
26187 1.38629 1.38629 1.38629 1.38629
26188 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26189 44 0.15719 3.27118 2.73043 3.16274 44 - -
26190 1.38629 1.38629 1.38629 1.38629
26191 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26192 45 3.30705 0.14631 3.36166 2.73626 45 - -
26193 1.38629 1.38629 1.38629 1.38629
26194 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
26195 //
26196 HMMER3/b [3.0 | March 2010]
26197 NAME 2_5.8_Metazoa_58S_start_oneh_long
26198 LENG 45
26199 ALPH DNA
26200 RF no
26201 CS no
26202 MAP yes
26203 DATE Fri Feb 24 23:12:26 2012
26204 NSEQ 68
26205 EFFN 3.332764
26206 CKSUM 148303286
26207 STATS LOCAL MSV -8.0502 0.71933
26208 STATS LOCAL VITERBI -7.6972 0.71933
26209 STATS LOCAL FORWARD -4.3500 0.71933
26210 HMM A C G T
26211 m->m m->i m->d i->m i->i d->m d->d
26212 COMPO 1.47373 1.32059 1.25656 1.51722
26213 1.38629 1.38629 1.38629 1.38629
26214 0.03682 4.01327 4.01327 1.46634 0.26236 0.00000 *
26215 1 3.43682 0.12977 3.48612 2.83170 1 - -
26216 1.38629 1.38629 1.38629 1.38629
26217 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26218 2 0.14147 3.38348 2.80402 3.28545 2 - -
26219 1.38629 1.38629 1.38629 1.38629
26220 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26221 3 0.14147 3.38348 2.80402 3.28545 3 - -
26222 1.38629 1.38629 1.38629 1.38629
26223 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26224 4 3.43682 0.12977 3.48612 2.83170 4 - -
26225 1.38629 1.38629 1.38629 1.38629
26226 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26227 5 3.09186 2.59721 3.13989 0.17815 5 - -
26228 1.38629 1.38629 1.38629 1.38629
26229 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26230 6 3.43682 0.12977 3.48612 2.83170 6 - -
26231 1.38629 1.38629 1.38629 1.38629
26232 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26233 7 2.94039 2.24572 2.99390 0.23419 7 - -
26234 1.38629 1.38629 1.38629 1.38629
26235 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26236 8 2.69542 2.43082 2.35634 0.28801 8 - -
26237 1.38629 1.38629 1.38629 1.38629
26238 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26239 9 0.14147 3.38348 2.80402 3.28545 9 - -
26240 1.38629 1.38629 1.38629 1.38629
26241 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26242 10 2.94977 3.59102 0.11680 3.49603 10 - -
26243 1.38629 1.38629 1.38629 1.38629
26244 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26245 11 3.43682 0.12977 3.48612 2.83170 11 - -
26246 1.38629 1.38629 1.38629 1.38629
26247 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26248 12 2.94977 3.59102 0.11680 3.49603 12 - -
26249 1.38629 1.38629 1.38629 1.38629
26250 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26251 13 2.94977 3.59102 0.11680 3.49603 13 - -
26252 1.38629 1.38629 1.38629 1.38629
26253 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26254 14 3.09186 2.59721 3.13989 0.17815 14 - -
26255 1.38629 1.38629 1.38629 1.38629
26256 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26257 15 2.94977 3.59102 0.11680 3.49603 15 - -
26258 1.38629 1.38629 1.38629 1.38629
26259 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26260 16 2.94977 3.59102 0.11680 3.49603 16 - -
26261 1.38629 1.38629 1.38629 1.38629
26262 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26263 17 0.14147 3.38348 2.80402 3.28545 17 - -
26264 1.38629 1.38629 1.38629 1.38629
26265 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26266 18 3.09186 2.59721 3.13989 0.17815 18 - -
26267 1.38629 1.38629 1.38629 1.38629
26268 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26269 19 3.43682 0.12977 3.48612 2.83170 19 - -
26270 1.38629 1.38629 1.38629 1.38629
26271 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26272 20 0.14147 3.38348 2.80402 3.28545 20 - -
26273 1.38629 1.38629 1.38629 1.38629
26274 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26275 21 3.43682 0.12977 3.48612 2.83170 21 - -
26276 1.38629 1.38629 1.38629 1.38629
26277 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26278 22 3.09186 2.59721 3.13989 0.17815 22 - -
26279 1.38629 1.38629 1.38629 1.38629
26280 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26281 23 3.43682 0.12977 3.48612 2.83170 23 - -
26282 1.38629 1.38629 1.38629 1.38629
26283 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26284 24 2.94977 3.59102 0.11680 3.49603 24 - -
26285 1.38629 1.38629 1.38629 1.38629
26286 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26287 25 2.94977 3.59102 0.11680 3.49603 25 - -
26288 1.38629 1.38629 1.38629 1.38629
26289 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26290 26 3.43682 0.12977 3.48612 2.83170 26 - -
26291 1.38629 1.38629 1.38629 1.38629
26292 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26293 27 3.09186 2.59721 3.13989 0.17815 27 - -
26294 1.38629 1.38629 1.38629 1.38629
26295 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26296 28 3.43682 0.12977 3.48612 2.83170 28 - -
26297 1.38629 1.38629 1.38629 1.38629
26298 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26299 29 2.94977 3.59102 0.11680 3.49603 29 - -
26300 1.38629 1.38629 1.38629 1.38629
26301 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26302 30 3.09186 2.59721 3.13989 0.17815 30 - -
26303 1.38629 1.38629 1.38629 1.38629
26304 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26305 31 2.94977 3.59102 0.11680 3.49603 31 - -
26306 1.38629 1.38629 1.38629 1.38629
26307 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26308 32 3.43682 0.12977 3.48612 2.83170 32 - -
26309 1.38629 1.38629 1.38629 1.38629
26310 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26311 33 2.54151 3.38452 0.16292 3.27799 33 - -
26312 1.38629 1.38629 1.38629 1.38629
26313 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26314 34 3.09186 2.59721 3.13989 0.17815 34 - -
26315 1.38629 1.38629 1.38629 1.38629
26316 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26317 35 3.43682 0.12977 3.48612 2.83170 35 - -
26318 1.38629 1.38629 1.38629 1.38629
26319 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26320 36 2.94977 3.59102 0.11680 3.49603 36 - -
26321 1.38629 1.38629 1.38629 1.38629
26322 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26323 37 0.14147 3.38348 2.80402 3.28545 37 - -
26324 1.38629 1.38629 1.38629 1.38629
26325 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26326 38 3.09186 2.59721 3.13989 0.17815 38 - -
26327 1.38629 1.38629 1.38629 1.38629
26328 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26329 39 2.71953 3.14925 0.19713 2.65745 39 - -
26330 1.38629 1.38629 1.38629 1.38629
26331 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26332 40 0.14147 3.38348 2.80402 3.28545 40 - -
26333 1.38629 1.38629 1.38629 1.38629
26334 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26335 41 0.14147 3.38348 2.80402 3.28545 41 - -
26336 1.38629 1.38629 1.38629 1.38629
26337 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26338 42 2.94977 3.59102 0.11680 3.49603 42 - -
26339 1.38629 1.38629 1.38629 1.38629
26340 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26341 43 0.14147 3.38348 2.80402 3.28545 43 - -
26342 1.38629 1.38629 1.38629 1.38629
26343 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26344 44 0.20263 3.17160 2.35722 3.06182 44 - -
26345 1.38629 1.38629 1.38629 1.38629
26346 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547
26347 45 3.43682 0.12977 3.48612 2.83170 45 - -
26348 1.38629 1.38629 1.38629 1.38629
26349 0.01858 3.99503 * 1.46634 0.26236 0.00000 *
26350 //
26351 HMMER3/b [3.0 | March 2010]
26352 NAME 2_5.8_Metazoa_58S_start_onei_long
26353 LENG 45
26354 ALPH DNA
26355 RF no
26356 CS no
26357 MAP yes
26358 DATE Fri Feb 24 23:12:35 2012
26359 NSEQ 10
26360 EFFN 3.247070
26361 CKSUM 3206921348
26362 STATS LOCAL MSV -8.2213 0.71932
26363 STATS LOCAL VITERBI -7.8415 0.71932
26364 STATS LOCAL FORWARD -3.8688 0.71932
26365 HMM A C G T
26366 m->m m->i m->d i->m i->i d->m d->d
26367 COMPO 1.46632 1.46690 1.10152 1.57880
26368 1.38629 1.38629 1.38629 1.38629
26369 0.03741 3.99766 3.99766 1.46634 0.26236 0.00000 *
26370 1 3.40484 0.13363 3.45549 2.80837 1 - -
26371 1.38629 1.38629 1.38629 1.38629
26372 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26373 2 0.14518 3.35575 2.78597 3.25510 2 - -
26374 1.38629 1.38629 1.38629 1.38629
26375 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26376 3 0.14518 3.35575 2.78597 3.25510 3 - -
26377 1.38629 1.38629 1.38629 1.38629
26378 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26379 4 3.40484 0.13363 3.45549 2.80837 4 - -
26380 1.38629 1.38629 1.38629 1.38629
26381 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26382 5 3.06393 2.57943 3.11303 0.18271 5 - -
26383 1.38629 1.38629 1.38629 1.38629
26384 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26385 6 3.40484 0.13363 3.45549 2.80837 6 - -
26386 1.38629 1.38629 1.38629 1.38629
26387 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26388 7 3.06393 2.57943 3.11303 0.18271 7 - -
26389 1.38629 1.38629 1.38629 1.38629
26390 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26391 8 0.14518 3.35575 2.78597 3.25510 8 - -
26392 1.38629 1.38629 1.38629 1.38629
26393 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26394 9 0.14518 3.35575 2.78597 3.25510 9 - -
26395 1.38629 1.38629 1.38629 1.38629
26396 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26397 10 2.93035 3.56282 0.11992 3.46492 10 - -
26398 1.38629 1.38629 1.38629 1.38629
26399 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26400 11 3.06393 2.57943 3.11303 0.18271 11 - -
26401 1.38629 1.38629 1.38629 1.38629
26402 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26403 12 2.93035 3.56282 0.11992 3.46492 12 - -
26404 1.38629 1.38629 1.38629 1.38629
26405 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26406 13 2.93035 3.56282 0.11992 3.46492 13 - -
26407 1.38629 1.38629 1.38629 1.38629
26408 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26409 14 3.06393 2.57943 3.11303 0.18271 14 - -
26410 1.38629 1.38629 1.38629 1.38629
26411 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26412 15 2.93035 3.56282 0.11992 3.46492 15 - -
26413 1.38629 1.38629 1.38629 1.38629
26414 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26415 16 2.93035 3.56282 0.11992 3.46492 16 - -
26416 1.38629 1.38629 1.38629 1.38629
26417 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26418 17 0.14518 3.35575 2.78597 3.25510 17 - -
26419 1.38629 1.38629 1.38629 1.38629
26420 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26421 18 3.06393 2.57943 3.11303 0.18271 18 - -
26422 1.38629 1.38629 1.38629 1.38629
26423 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26424 19 3.40484 0.13363 3.45549 2.80837 19 - -
26425 1.38629 1.38629 1.38629 1.38629
26426 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26427 20 0.14518 3.35575 2.78597 3.25510 20 - -
26428 1.38629 1.38629 1.38629 1.38629
26429 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26430 21 3.40484 0.13363 3.45549 2.80837 21 - -
26431 1.38629 1.38629 1.38629 1.38629
26432 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26433 22 3.06393 2.57943 3.11303 0.18271 22 - -
26434 1.38629 1.38629 1.38629 1.38629
26435 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26436 23 3.40484 0.13363 3.45549 2.80837 23 - -
26437 1.38629 1.38629 1.38629 1.38629
26438 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26439 24 2.93035 3.56282 0.11992 3.46492 24 - -
26440 1.38629 1.38629 1.38629 1.38629
26441 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26442 25 2.93035 3.56282 0.11992 3.46492 25 - -
26443 1.38629 1.38629 1.38629 1.38629
26444 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26445 26 3.40484 0.13363 3.45549 2.80837 26 - -
26446 1.38629 1.38629 1.38629 1.38629
26447 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26448 27 3.06393 2.57943 3.11303 0.18271 27 - -
26449 1.38629 1.38629 1.38629 1.38629
26450 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26451 28 3.40484 0.13363 3.45549 2.80837 28 - -
26452 1.38629 1.38629 1.38629 1.38629
26453 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26454 29 2.93035 3.56282 0.11992 3.46492 29 - -
26455 1.38629 1.38629 1.38629 1.38629
26456 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26457 30 2.32215 2.52809 0.43127 1.75769 30 - -
26458 1.38629 1.38629 1.38629 1.38629
26459 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26460 31 2.93035 3.56282 0.11992 3.46492 31 - -
26461 1.38629 1.38629 1.38629 1.38629
26462 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26463 32 2.93035 3.56282 0.11992 3.46492 32 - -
26464 1.38629 1.38629 1.38629 1.38629
26465 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26466 33 2.93035 3.56282 0.11992 3.46492 33 - -
26467 1.38629 1.38629 1.38629 1.38629
26468 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26469 34 3.06393 2.57943 3.11303 0.18271 34 - -
26470 1.38629 1.38629 1.38629 1.38629
26471 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26472 35 3.40484 0.13363 3.45549 2.80837 35 - -
26473 1.38629 1.38629 1.38629 1.38629
26474 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26475 36 2.93035 3.56282 0.11992 3.46492 36 - -
26476 1.38629 1.38629 1.38629 1.38629
26477 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26478 37 0.14518 3.35575 2.78597 3.25510 37 - -
26479 1.38629 1.38629 1.38629 1.38629
26480 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26481 38 3.06393 2.57943 3.11303 0.18271 38 - -
26482 1.38629 1.38629 1.38629 1.38629
26483 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26484 39 2.93035 3.56282 0.11992 3.46492 39 - -
26485 1.38629 1.38629 1.38629 1.38629
26486 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26487 40 0.14518 3.35575 2.78597 3.25510 40 - -
26488 1.38629 1.38629 1.38629 1.38629
26489 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26490 41 0.14518 3.35575 2.78597 3.25510 41 - -
26491 1.38629 1.38629 1.38629 1.38629
26492 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26493 42 2.93035 3.56282 0.11992 3.46492 42 - -
26494 1.38629 1.38629 1.38629 1.38629
26495 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26496 43 0.14518 3.35575 2.78597 3.25510 43 - -
26497 1.38629 1.38629 1.38629 1.38629
26498 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26499 44 2.93035 3.56282 0.11992 3.46492 44 - -
26500 1.38629 1.38629 1.38629 1.38629
26501 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
26502 45 3.40484 0.13363 3.45549 2.80837 45 - -
26503 1.38629 1.38629 1.38629 1.38629
26504 0.01888 3.97913 * 1.46634 0.26236 0.00000 *
26505 //
26506 HMMER3/b [3.0 | March 2010]
26507 NAME 2_5.8_Metazoa_58S_start_onej_long
26508 LENG 45
26509 ALPH DNA
26510 RF no
26511 CS no
26512 MAP yes
26513 DATE Fri Feb 24 23:12:40 2012
26514 NSEQ 25
26515 EFFN 3.768921
26516 CKSUM 1958450389
26517 STATS LOCAL MSV -6.8992 0.71931
26518 STATS LOCAL VITERBI -7.5325 0.71931
26519 STATS LOCAL FORWARD -4.3956 0.71931
26520 HMM A C G T
26521 m->m m->i m->d i->m i->i d->m d->d
26522 COMPO 1.57212 1.38838 1.16636 1.46353
26523 1.38629 1.38629 1.38629 1.38629
26524 0.03408 4.08915 4.08915 1.46634 0.26236 0.00000 *
26525 1 2.48307 0.88584 2.55439 0.85237 1 - -
26526 1.38629 1.38629 1.38629 1.38629
26527 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26528 2 2.50922 1.10611 2.57909 0.66946 2 - -
26529 1.38629 1.38629 1.38629 1.38629
26530 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26531 3 0.12554 3.51306 2.88759 3.42758 3 - -
26532 1.38629 1.38629 1.38629 1.38629
26533 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26534 4 3.58536 0.11343 3.62811 2.93859 4 - -
26535 1.38629 1.38629 1.38629 1.38629
26536 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26537 5 3.22473 2.68150 3.26760 0.15820 5 - -
26538 1.38629 1.38629 1.38629 1.38629
26539 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26540 6 3.58536 0.11343 3.62811 2.93859 6 - -
26541 1.38629 1.38629 1.38629 1.38629
26542 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26543 7 3.22473 2.68150 3.26760 0.15820 7 - -
26544 1.38629 1.38629 1.38629 1.38629
26545 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26546 8 0.12554 3.51306 2.88759 3.42758 8 - -
26547 1.38629 1.38629 1.38629 1.38629
26548 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26549 9 0.60591 2.33919 1.63915 1.80867 9 - -
26550 1.38629 1.38629 1.38629 1.38629
26551 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26552 10 3.03806 3.72071 0.10359 3.63957 10 - -
26553 1.38629 1.38629 1.38629 1.38629
26554 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26555 11 3.58536 0.11343 3.62811 2.93859 11 - -
26556 1.38629 1.38629 1.38629 1.38629
26557 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26558 12 3.03806 3.72071 0.10359 3.63957 12 - -
26559 1.38629 1.38629 1.38629 1.38629
26560 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26561 13 3.03806 3.72071 0.10359 3.63957 13 - -
26562 1.38629 1.38629 1.38629 1.38629
26563 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26564 14 3.22473 2.68150 3.26760 0.15820 14 - -
26565 1.38629 1.38629 1.38629 1.38629
26566 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26567 15 3.03806 3.72071 0.10359 3.63957 15 - -
26568 1.38629 1.38629 1.38629 1.38629
26569 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26570 16 3.03806 3.72071 0.10359 3.63957 16 - -
26571 1.38629 1.38629 1.38629 1.38629
26572 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26573 17 0.12554 3.51306 2.88759 3.42758 17 - -
26574 1.38629 1.38629 1.38629 1.38629
26575 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26576 18 3.22473 2.68150 3.26760 0.15820 18 - -
26577 1.38629 1.38629 1.38629 1.38629
26578 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26579 19 3.58536 0.11343 3.62811 2.93859 19 - -
26580 1.38629 1.38629 1.38629 1.38629
26581 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26582 20 0.12554 3.51306 2.88759 3.42758 20 - -
26583 1.38629 1.38629 1.38629 1.38629
26584 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26585 21 3.58536 0.11343 3.62811 2.93859 21 - -
26586 1.38629 1.38629 1.38629 1.38629
26587 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26588 22 3.22473 2.68150 3.26760 0.15820 22 - -
26589 1.38629 1.38629 1.38629 1.38629
26590 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26591 23 3.58536 0.11343 3.62811 2.93859 23 - -
26592 1.38629 1.38629 1.38629 1.38629
26593 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26594 24 3.03806 3.72071 0.10359 3.63957 24 - -
26595 1.38629 1.38629 1.38629 1.38629
26596 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26597 25 3.03806 3.72071 0.10359 3.63957 25 - -
26598 1.38629 1.38629 1.38629 1.38629
26599 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26600 26 3.58536 0.11343 3.62811 2.93859 26 - -
26601 1.38629 1.38629 1.38629 1.38629
26602 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26603 27 3.22473 2.68150 3.26760 0.15820 27 - -
26604 1.38629 1.38629 1.38629 1.38629
26605 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26606 28 3.58536 0.11343 3.62811 2.93859 28 - -
26607 1.38629 1.38629 1.38629 1.38629
26608 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26609 29 3.03806 3.72071 0.10359 3.63957 29 - -
26610 1.38629 1.38629 1.38629 1.38629
26611 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26612 30 3.22473 2.68150 3.26760 0.15820 30 - -
26613 1.38629 1.38629 1.38629 1.38629
26614 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26615 31 3.03806 3.72071 0.10359 3.63957 31 - -
26616 1.38629 1.38629 1.38629 1.38629
26617 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26618 32 2.06075 1.37151 1.50789 0.92245 32 - -
26619 1.38629 1.38629 1.38629 1.38629
26620 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26621 33 3.03806 3.72071 0.10359 3.63957 33 - -
26622 1.38629 1.38629 1.38629 1.38629
26623 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26624 34 3.22473 2.68150 3.26760 0.15820 34 - -
26625 1.38629 1.38629 1.38629 1.38629
26626 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26627 35 3.58536 0.11343 3.62811 2.93859 35 - -
26628 1.38629 1.38629 1.38629 1.38629
26629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26630 36 3.03806 3.72071 0.10359 3.63957 36 - -
26631 1.38629 1.38629 1.38629 1.38629
26632 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26633 37 0.12554 3.51306 2.88759 3.42758 37 - -
26634 1.38629 1.38629 1.38629 1.38629
26635 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26636 38 3.22473 2.68150 3.26760 0.15820 38 - -
26637 1.38629 1.38629 1.38629 1.38629
26638 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26639 39 3.03806 3.72071 0.10359 3.63957 39 - -
26640 1.38629 1.38629 1.38629 1.38629
26641 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26642 40 0.12554 3.51306 2.88759 3.42758 40 - -
26643 1.38629 1.38629 1.38629 1.38629
26644 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26645 41 0.12554 3.51306 2.88759 3.42758 41 - -
26646 1.38629 1.38629 1.38629 1.38629
26647 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26648 42 3.03806 3.72071 0.10359 3.63957 42 - -
26649 1.38629 1.38629 1.38629 1.38629
26650 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26651 43 0.12554 3.51306 2.88759 3.42758 43 - -
26652 1.38629 1.38629 1.38629 1.38629
26653 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26654 44 3.03806 3.72071 0.10359 3.63957 44 - -
26655 1.38629 1.38629 1.38629 1.38629
26656 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547
26657 45 3.58536 0.11343 3.62811 2.93859 45 - -
26658 1.38629 1.38629 1.38629 1.38629
26659 0.01719 4.07226 * 1.46634 0.26236 0.00000 *
26660 //
26661 HMMER3/b [3.0 | March 2010]
26662 NAME 2_5.8_Metazoa_58S_start_onek_long
26663 LENG 45
26664 ALPH DNA
26665 RF no
26666 CS no
26667 MAP yes
26668 DATE Fri Feb 24 23:12:45 2012
26669 NSEQ 3
26670 EFFN 3.000000
26671 CKSUM 1530221864
26672 STATS LOCAL MSV -7.9709 0.72006
26673 STATS LOCAL VITERBI -7.7118 0.72006
26674 STATS LOCAL FORWARD -4.1068 0.72006
26675 HMM A C G T
26676 m->m m->i m->d i->m i->i d->m d->d
26677 COMPO 1.54975 1.26730 1.25893 1.50439
26678 1.38629 1.38629 1.38629 1.38629
26679 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
26680 1 3.30705 0.14631 3.36166 2.73626 1 - -
26681 1.38629 1.38629 1.38629 1.38629
26682 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26683 2 2.97980 2.52563 3.03204 0.19727 2 - -
26684 1.38629 1.38629 1.38629 1.38629
26685 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26686 3 0.15719 3.27118 2.73043 3.16274 3 - -
26687 1.38629 1.38629 1.38629 1.38629
26688 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26689 4 3.30705 0.14631 3.36166 2.73626 4 - -
26690 1.38629 1.38629 1.38629 1.38629
26691 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26692 5 2.97980 2.52563 3.03204 0.19727 5 - -
26693 1.38629 1.38629 1.38629 1.38629
26694 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26695 6 3.30705 0.14631 3.36166 2.73626 6 - -
26696 1.38629 1.38629 1.38629 1.38629
26697 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26698 7 2.97980 2.52563 3.03204 0.19727 7 - -
26699 1.38629 1.38629 1.38629 1.38629
26700 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26701 8 0.15719 3.27118 2.73043 3.16274 8 - -
26702 1.38629 1.38629 1.38629 1.38629
26703 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26704 9 2.97980 2.52563 3.03204 0.19727 9 - -
26705 1.38629 1.38629 1.38629 1.38629
26706 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26707 10 2.86982 3.47591 0.13017 3.36931 10 - -
26708 1.38629 1.38629 1.38629 1.38629
26709 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26710 11 3.30705 0.14631 3.36166 2.73626 11 - -
26711 1.38629 1.38629 1.38629 1.38629
26712 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26713 12 2.86982 3.47591 0.13017 3.36931 12 - -
26714 1.38629 1.38629 1.38629 1.38629
26715 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26716 13 2.86982 3.47591 0.13017 3.36931 13 - -
26717 1.38629 1.38629 1.38629 1.38629
26718 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26719 14 2.97980 2.52563 3.03204 0.19727 14 - -
26720 1.38629 1.38629 1.38629 1.38629
26721 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26722 15 2.86982 3.47591 0.13017 3.36931 15 - -
26723 1.38629 1.38629 1.38629 1.38629
26724 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26725 16 2.86982 3.47591 0.13017 3.36931 16 - -
26726 1.38629 1.38629 1.38629 1.38629
26727 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26728 17 0.15719 3.27118 2.73043 3.16274 17 - -
26729 1.38629 1.38629 1.38629 1.38629
26730 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26731 18 2.97980 2.52563 3.03204 0.19727 18 - -
26732 1.38629 1.38629 1.38629 1.38629
26733 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26734 19 3.30705 0.14631 3.36166 2.73626 19 - -
26735 1.38629 1.38629 1.38629 1.38629
26736 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26737 20 0.15719 3.27118 2.73043 3.16274 20 - -
26738 1.38629 1.38629 1.38629 1.38629
26739 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26740 21 3.30705 0.14631 3.36166 2.73626 21 - -
26741 1.38629 1.38629 1.38629 1.38629
26742 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26743 22 2.97980 2.52563 3.03204 0.19727 22 - -
26744 1.38629 1.38629 1.38629 1.38629
26745 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26746 23 3.30705 0.14631 3.36166 2.73626 23 - -
26747 1.38629 1.38629 1.38629 1.38629
26748 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26749 24 2.86982 3.47591 0.13017 3.36931 24 - -
26750 1.38629 1.38629 1.38629 1.38629
26751 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26752 25 2.86982 3.47591 0.13017 3.36931 25 - -
26753 1.38629 1.38629 1.38629 1.38629
26754 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26755 26 3.30705 0.14631 3.36166 2.73626 26 - -
26756 1.38629 1.38629 1.38629 1.38629
26757 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26758 27 2.97980 2.52563 3.03204 0.19727 27 - -
26759 1.38629 1.38629 1.38629 1.38629
26760 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26761 28 3.30705 0.14631 3.36166 2.73626 28 - -
26762 1.38629 1.38629 1.38629 1.38629
26763 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26764 29 2.86982 3.47591 0.13017 3.36931 29 - -
26765 1.38629 1.38629 1.38629 1.38629
26766 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26767 30 3.30705 0.14631 3.36166 2.73626 30 - -
26768 1.38629 1.38629 1.38629 1.38629
26769 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26770 31 3.30705 0.14631 3.36166 2.73626 31 - -
26771 1.38629 1.38629 1.38629 1.38629
26772 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26773 32 0.15719 3.27118 2.73043 3.16274 32 - -
26774 1.38629 1.38629 1.38629 1.38629
26775 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26776 33 2.86982 3.47591 0.13017 3.36931 33 - -
26777 1.38629 1.38629 1.38629 1.38629
26778 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26779 34 2.97980 2.52563 3.03204 0.19727 34 - -
26780 1.38629 1.38629 1.38629 1.38629
26781 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26782 35 3.30705 0.14631 3.36166 2.73626 35 - -
26783 1.38629 1.38629 1.38629 1.38629
26784 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26785 36 2.86982 3.47591 0.13017 3.36931 36 - -
26786 1.38629 1.38629 1.38629 1.38629
26787 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26788 37 0.15719 3.27118 2.73043 3.16274 37 - -
26789 1.38629 1.38629 1.38629 1.38629
26790 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26791 38 2.97980 2.52563 3.03204 0.19727 38 - -
26792 1.38629 1.38629 1.38629 1.38629
26793 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26794 39 2.86982 3.47591 0.13017 3.36931 39 - -
26795 1.38629 1.38629 1.38629 1.38629
26796 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26797 40 0.15719 3.27118 2.73043 3.16274 40 - -
26798 1.38629 1.38629 1.38629 1.38629
26799 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26800 41 0.15719 3.27118 2.73043 3.16274 41 - -
26801 1.38629 1.38629 1.38629 1.38629
26802 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26803 42 2.86982 3.47591 0.13017 3.36931 42 - -
26804 1.38629 1.38629 1.38629 1.38629
26805 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26806 43 0.15719 3.27118 2.73043 3.16274 43 - -
26807 1.38629 1.38629 1.38629 1.38629
26808 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26809 44 2.86982 3.47591 0.13017 3.36931 44 - -
26810 1.38629 1.38629 1.38629 1.38629
26811 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
26812 45 3.30705 0.14631 3.36166 2.73626 45 - -
26813 1.38629 1.38629 1.38629 1.38629
26814 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
26815 //
26816 HMMER3/b [3.0 | March 2010]
26817 NAME 2_5.8_Metazoa_58S_start_onel_long
26818 LENG 45
26819 ALPH DNA
26820 RF no
26821 CS no
26822 MAP yes
26823 DATE Fri Feb 24 23:12:49 2012
26824 NSEQ 12
26825 EFFN 3.231445
26826 CKSUM 3595403650
26827 STATS LOCAL MSV -7.9439 0.71932
26828 STATS LOCAL VITERBI -7.6666 0.71932
26829 STATS LOCAL FORWARD -4.3889 0.71932
26830 HMM A C G T
26831 m->m m->i m->d i->m i->i d->m d->d
26832 COMPO 1.56223 1.32606 1.19240 1.50816
26833 1.38629 1.38629 1.38629 1.38629
26834 0.03752 3.99479 3.99479 1.46634 0.26236 0.00000 *
26835 1 3.39890 0.13436 3.44980 2.80403 1 - -
26836 1.38629 1.38629 1.38629 1.38629
26837 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26838 2 0.14587 3.35060 2.78262 3.24947 2 - -
26839 1.38629 1.38629 1.38629 1.38629
26840 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26841 3 0.30324 2.90483 1.93298 2.77896 3 - -
26842 1.38629 1.38629 1.38629 1.38629
26843 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26844 4 3.39890 0.13436 3.44980 2.80403 4 - -
26845 1.38629 1.38629 1.38629 1.38629
26846 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26847 5 3.05877 2.57614 3.10806 0.18356 5 - -
26848 1.38629 1.38629 1.38629 1.38629
26849 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26850 6 3.39890 0.13436 3.44980 2.80403 6 - -
26851 1.38629 1.38629 1.38629 1.38629
26852 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26853 7 3.05877 2.57614 3.10806 0.18356 7 - -
26854 1.38629 1.38629 1.38629 1.38629
26855 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26856 8 0.14587 3.35060 2.78262 3.24947 8 - -
26857 1.38629 1.38629 1.38629 1.38629
26858 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26859 9 3.05877 2.57614 3.10806 0.18356 9 - -
26860 1.38629 1.38629 1.38629 1.38629
26861 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26862 10 2.92673 3.55757 0.12052 3.45913 10 - -
26863 1.38629 1.38629 1.38629 1.38629
26864 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26865 11 3.39890 0.13436 3.44980 2.80403 11 - -
26866 1.38629 1.38629 1.38629 1.38629
26867 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26868 12 2.92673 3.55757 0.12052 3.45913 12 - -
26869 1.38629 1.38629 1.38629 1.38629
26870 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26871 13 2.92673 3.55757 0.12052 3.45913 13 - -
26872 1.38629 1.38629 1.38629 1.38629
26873 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26874 14 3.05877 2.57614 3.10806 0.18356 14 - -
26875 1.38629 1.38629 1.38629 1.38629
26876 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26877 15 2.92673 3.55757 0.12052 3.45913 15 - -
26878 1.38629 1.38629 1.38629 1.38629
26879 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26880 16 2.92673 3.55757 0.12052 3.45913 16 - -
26881 1.38629 1.38629 1.38629 1.38629
26882 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26883 17 0.14587 3.35060 2.78262 3.24947 17 - -
26884 1.38629 1.38629 1.38629 1.38629
26885 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26886 18 3.05877 2.57614 3.10806 0.18356 18 - -
26887 1.38629 1.38629 1.38629 1.38629
26888 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26889 19 3.39890 0.13436 3.44980 2.80403 19 - -
26890 1.38629 1.38629 1.38629 1.38629
26891 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26892 20 0.14587 3.35060 2.78262 3.24947 20 - -
26893 1.38629 1.38629 1.38629 1.38629
26894 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26895 21 3.39890 0.13436 3.44980 2.80403 21 - -
26896 1.38629 1.38629 1.38629 1.38629
26897 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26898 22 3.05877 2.57614 3.10806 0.18356 22 - -
26899 1.38629 1.38629 1.38629 1.38629
26900 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26901 23 3.39890 0.13436 3.44980 2.80403 23 - -
26902 1.38629 1.38629 1.38629 1.38629
26903 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26904 24 2.92673 3.55757 0.12052 3.45913 24 - -
26905 1.38629 1.38629 1.38629 1.38629
26906 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26907 25 2.92673 3.55757 0.12052 3.45913 25 - -
26908 1.38629 1.38629 1.38629 1.38629
26909 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26910 26 3.39890 0.13436 3.44980 2.80403 26 - -
26911 1.38629 1.38629 1.38629 1.38629
26912 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26913 27 3.05877 2.57614 3.10806 0.18356 27 - -
26914 1.38629 1.38629 1.38629 1.38629
26915 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26916 28 3.39890 0.13436 3.44980 2.80403 28 - -
26917 1.38629 1.38629 1.38629 1.38629
26918 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26919 29 2.92673 3.55757 0.12052 3.45913 29 - -
26920 1.38629 1.38629 1.38629 1.38629
26921 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26922 30 3.05877 2.57614 3.10806 0.18356 30 - -
26923 1.38629 1.38629 1.38629 1.38629
26924 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26925 31 2.92673 3.55757 0.12052 3.45913 31 - -
26926 1.38629 1.38629 1.38629 1.38629
26927 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26928 32 3.39890 0.13436 3.44980 2.80403 32 - -
26929 1.38629 1.38629 1.38629 1.38629
26930 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26931 33 2.92673 3.55757 0.12052 3.45913 33 - -
26932 1.38629 1.38629 1.38629 1.38629
26933 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26934 34 3.05877 2.57614 3.10806 0.18356 34 - -
26935 1.38629 1.38629 1.38629 1.38629
26936 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26937 35 3.39890 0.13436 3.44980 2.80403 35 - -
26938 1.38629 1.38629 1.38629 1.38629
26939 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26940 36 2.92673 3.55757 0.12052 3.45913 36 - -
26941 1.38629 1.38629 1.38629 1.38629
26942 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26943 37 0.14587 3.35060 2.78262 3.24947 37 - -
26944 1.38629 1.38629 1.38629 1.38629
26945 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26946 38 3.05877 2.57614 3.10806 0.18356 38 - -
26947 1.38629 1.38629 1.38629 1.38629
26948 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26949 39 2.92673 3.55757 0.12052 3.45913 39 - -
26950 1.38629 1.38629 1.38629 1.38629
26951 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26952 40 0.14587 3.35060 2.78262 3.24947 40 - -
26953 1.38629 1.38629 1.38629 1.38629
26954 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26955 41 0.14587 3.35060 2.78262 3.24947 41 - -
26956 1.38629 1.38629 1.38629 1.38629
26957 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26958 42 2.92673 3.55757 0.12052 3.45913 42 - -
26959 1.38629 1.38629 1.38629 1.38629
26960 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26961 43 0.14587 3.35060 2.78262 3.24947 43 - -
26962 1.38629 1.38629 1.38629 1.38629
26963 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26964 44 2.92673 3.55757 0.12052 3.45913 44 - -
26965 1.38629 1.38629 1.38629 1.38629
26966 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
26967 45 3.39890 0.13436 3.44980 2.80403 45 - -
26968 1.38629 1.38629 1.38629 1.38629
26969 0.01893 3.97621 * 1.46634 0.26236 0.00000 *
26970 //
26971 HMMER3/b [3.0 | March 2010]
26972 NAME 2_5.8_Metazoa_58S_start_onem_long
26973 LENG 45
26974 ALPH DNA
26975 RF no
26976 CS no
26977 MAP yes
26978 DATE Fri Feb 24 23:12:55 2012
26979 NSEQ 67
26980 EFFN 3.275574
26981 CKSUM 1052117769
26982 STATS LOCAL MSV -8.1070 0.71931
26983 STATS LOCAL VITERBI -7.7354 0.71931
26984 STATS LOCAL FORWARD -4.2705 0.71931
26985 HMM A C G T
26986 m->m m->i m->d i->m i->i d->m d->d
26987 COMPO 1.54402 1.45383 1.14014 1.45657
26988 1.38629 1.38629 1.38629 1.38629
26989 0.03721 4.00288 4.00288 1.46634 0.26236 0.00000 *
26990 1 2.60511 1.60359 2.67029 0.42205 1 - -
26991 1.38629 1.38629 1.38629 1.38629
26992 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
26993 2 0.14392 3.36506 2.79204 3.26529 2 - -
26994 1.38629 1.38629 1.38629 1.38629
26995 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
26996 3 0.14392 3.36506 2.79204 3.26529 3 - -
26997 1.38629 1.38629 1.38629 1.38629
26998 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
26999 4 3.41558 0.13232 3.46578 2.81622 4 - -
27000 1.38629 1.38629 1.38629 1.38629
27001 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27002 5 3.07329 2.58539 3.12203 0.18117 5 - -
27003 1.38629 1.38629 1.38629 1.38629
27004 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27005 6 3.07329 2.58539 3.12203 0.18117 6 - -
27006 1.38629 1.38629 1.38629 1.38629
27007 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27008 7 3.07329 2.58539 3.12203 0.18117 7 - -
27009 1.38629 1.38629 1.38629 1.38629
27010 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27011 8 2.93690 3.57231 0.11886 3.47538 8 - -
27012 1.38629 1.38629 1.38629 1.38629
27013 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27014 9 0.14392 3.36506 2.79204 3.26529 9 - -
27015 1.38629 1.38629 1.38629 1.38629
27016 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27017 10 2.93690 3.57231 0.11886 3.47538 10 - -
27018 1.38629 1.38629 1.38629 1.38629
27019 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27020 11 3.41558 0.13232 3.46578 2.81622 11 - -
27021 1.38629 1.38629 1.38629 1.38629
27022 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27023 12 2.93690 3.57231 0.11886 3.47538 12 - -
27024 1.38629 1.38629 1.38629 1.38629
27025 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27026 13 2.93690 3.57231 0.11886 3.47538 13 - -
27027 1.38629 1.38629 1.38629 1.38629
27028 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27029 14 3.07329 2.58539 3.12203 0.18117 14 - -
27030 1.38629 1.38629 1.38629 1.38629
27031 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27032 15 2.93690 3.57231 0.11886 3.47538 15 - -
27033 1.38629 1.38629 1.38629 1.38629
27034 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27035 16 2.93690 3.57231 0.11886 3.47538 16 - -
27036 1.38629 1.38629 1.38629 1.38629
27037 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27038 17 0.14392 3.36506 2.79204 3.26529 17 - -
27039 1.38629 1.38629 1.38629 1.38629
27040 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27041 18 3.07329 2.58539 3.12203 0.18117 18 - -
27042 1.38629 1.38629 1.38629 1.38629
27043 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27044 19 3.41558 0.13232 3.46578 2.81622 19 - -
27045 1.38629 1.38629 1.38629 1.38629
27046 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27047 20 0.14392 3.36506 2.79204 3.26529 20 - -
27048 1.38629 1.38629 1.38629 1.38629
27049 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27050 21 3.41558 0.13232 3.46578 2.81622 21 - -
27051 1.38629 1.38629 1.38629 1.38629
27052 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27053 22 3.07329 2.58539 3.12203 0.18117 22 - -
27054 1.38629 1.38629 1.38629 1.38629
27055 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27056 23 3.41558 0.13232 3.46578 2.81622 23 - -
27057 1.38629 1.38629 1.38629 1.38629
27058 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27059 24 2.84909 3.19562 0.14671 3.28021 24 - -
27060 1.38629 1.38629 1.38629 1.38629
27061 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27062 25 2.93690 3.57231 0.11886 3.47538 25 - -
27063 1.38629 1.38629 1.38629 1.38629
27064 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27065 26 3.41558 0.13232 3.46578 2.81622 26 - -
27066 1.38629 1.38629 1.38629 1.38629
27067 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27068 27 3.07329 2.58539 3.12203 0.18117 27 - -
27069 1.38629 1.38629 1.38629 1.38629
27070 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27071 28 3.41558 0.13232 3.46578 2.81622 28 - -
27072 1.38629 1.38629 1.38629 1.38629
27073 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27074 29 2.93690 3.57231 0.11886 3.47538 29 - -
27075 1.38629 1.38629 1.38629 1.38629
27076 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27077 30 3.07329 2.58539 3.12203 0.18117 30 - -
27078 1.38629 1.38629 1.38629 1.38629
27079 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27080 31 2.93690 3.57231 0.11886 3.47538 31 - -
27081 1.38629 1.38629 1.38629 1.38629
27082 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27083 32 3.41558 0.13232 3.46578 2.81622 32 - -
27084 1.38629 1.38629 1.38629 1.38629
27085 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27086 33 2.93690 3.57231 0.11886 3.47538 33 - -
27087 1.38629 1.38629 1.38629 1.38629
27088 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27089 34 3.07329 2.58539 3.12203 0.18117 34 - -
27090 1.38629 1.38629 1.38629 1.38629
27091 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27092 35 3.41558 0.13232 3.46578 2.81622 35 - -
27093 1.38629 1.38629 1.38629 1.38629
27094 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27095 36 2.93690 3.57231 0.11886 3.47538 36 - -
27096 1.38629 1.38629 1.38629 1.38629
27097 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27098 37 0.14392 3.36506 2.79204 3.26529 37 - -
27099 1.38629 1.38629 1.38629 1.38629
27100 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27101 38 3.07329 2.58539 3.12203 0.18117 38 - -
27102 1.38629 1.38629 1.38629 1.38629
27103 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27104 39 2.93690 3.57231 0.11886 3.47538 39 - -
27105 1.38629 1.38629 1.38629 1.38629
27106 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27107 40 0.14392 3.36506 2.79204 3.26529 40 - -
27108 1.38629 1.38629 1.38629 1.38629
27109 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27110 41 0.14392 3.36506 2.79204 3.26529 41 - -
27111 1.38629 1.38629 1.38629 1.38629
27112 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27113 42 2.93690 3.57231 0.11886 3.47538 42 - -
27114 1.38629 1.38629 1.38629 1.38629
27115 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27116 43 0.14392 3.36506 2.79204 3.26529 43 - -
27117 1.38629 1.38629 1.38629 1.38629
27118 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27119 44 2.93690 3.57231 0.11886 3.47538 44 - -
27120 1.38629 1.38629 1.38629 1.38629
27121 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547
27122 45 3.41558 0.13232 3.46578 2.81622 45 - -
27123 1.38629 1.38629 1.38629 1.38629
27124 0.01878 3.98445 * 1.46634 0.26236 0.00000 *
27125 //
27126 HMMER3/b [3.0 | March 2010]
27127 NAME 2_5.8_Metazoa_58S_start_onen_long
27128 LENG 45
27129 ALPH DNA
27130 RF no
27131 CS no
27132 MAP yes
27133 DATE Fri Feb 24 23:13:00 2012
27134 NSEQ 36
27135 EFFN 3.511230
27136 CKSUM 2085619721
27137 STATS LOCAL MSV -7.2493 0.71933
27138 STATS LOCAL VITERBI -7.5654 0.71933
27139 STATS LOCAL FORWARD -4.2751 0.71933
27140 HMM A C G T
27141 m->m m->i m->d i->m i->i d->m d->d
27142 COMPO 1.50964 1.42548 1.18575 1.45628
27143 1.38629 1.38629 1.38629 1.38629
27144 0.03565 4.04502 4.04502 1.46634 0.26236 0.00000 *
27145 1 2.45497 0.77017 2.52710 0.99072 1 - -
27146 1.38629 1.38629 1.38629 1.38629
27147 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27148 2 0.85115 2.19026 2.18289 1.05419 2 - -
27149 1.38629 1.38629 1.38629 1.38629
27150 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27151 3 0.13441 3.43877 2.83979 3.34604 3 - -
27152 1.38629 1.38629 1.38629 1.38629
27153 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27154 4 3.50040 0.12246 3.54695 2.87773 4 - -
27155 1.38629 1.38629 1.38629 1.38629
27156 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27157 5 3.14806 2.63290 3.19393 0.16938 5 - -
27158 1.38629 1.38629 1.38629 1.38629
27159 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27160 6 3.50040 0.12246 3.54695 2.87773 6 - -
27161 1.38629 1.38629 1.38629 1.38629
27162 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27163 7 3.14806 2.63290 3.19393 0.16938 7 - -
27164 1.38629 1.38629 1.38629 1.38629
27165 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27166 8 0.13441 3.43877 2.83979 3.34604 8 - -
27167 1.38629 1.38629 1.38629 1.38629
27168 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27169 9 0.13441 3.43877 2.83979 3.34604 9 - -
27170 1.38629 1.38629 1.38629 1.38629
27171 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27172 10 2.98791 3.64678 0.11090 3.55766 10 - -
27173 1.38629 1.38629 1.38629 1.38629
27174 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27175 11 3.50040 0.12246 3.54695 2.87773 11 - -
27176 1.38629 1.38629 1.38629 1.38629
27177 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27178 12 2.98791 3.64678 0.11090 3.55766 12 - -
27179 1.38629 1.38629 1.38629 1.38629
27180 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27181 13 2.98791 3.64678 0.11090 3.55766 13 - -
27182 1.38629 1.38629 1.38629 1.38629
27183 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27184 14 3.14806 2.63290 3.19393 0.16938 14 - -
27185 1.38629 1.38629 1.38629 1.38629
27186 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27187 15 2.98791 3.64678 0.11090 3.55766 15 - -
27188 1.38629 1.38629 1.38629 1.38629
27189 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27190 16 2.98791 3.64678 0.11090 3.55766 16 - -
27191 1.38629 1.38629 1.38629 1.38629
27192 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27193 17 0.13441 3.43877 2.83979 3.34604 17 - -
27194 1.38629 1.38629 1.38629 1.38629
27195 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27196 18 3.14806 2.63290 3.19393 0.16938 18 - -
27197 1.38629 1.38629 1.38629 1.38629
27198 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27199 19 3.50040 0.12246 3.54695 2.87773 19 - -
27200 1.38629 1.38629 1.38629 1.38629
27201 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27202 20 0.13441 3.43877 2.83979 3.34604 20 - -
27203 1.38629 1.38629 1.38629 1.38629
27204 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27205 21 3.50040 0.12246 3.54695 2.87773 21 - -
27206 1.38629 1.38629 1.38629 1.38629
27207 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27208 22 3.14806 2.63290 3.19393 0.16938 22 - -
27209 1.38629 1.38629 1.38629 1.38629
27210 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27211 23 3.50040 0.12246 3.54695 2.87773 23 - -
27212 1.38629 1.38629 1.38629 1.38629
27213 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27214 24 2.98791 3.64678 0.11090 3.55766 24 - -
27215 1.38629 1.38629 1.38629 1.38629
27216 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27217 25 2.98791 3.64678 0.11090 3.55766 25 - -
27218 1.38629 1.38629 1.38629 1.38629
27219 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27220 26 3.21387 0.18937 3.26983 2.36118 26 - -
27221 1.38629 1.38629 1.38629 1.38629
27222 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27223 27 3.14806 2.63290 3.19393 0.16938 27 - -
27224 1.38629 1.38629 1.38629 1.38629
27225 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27226 28 3.50040 0.12246 3.54695 2.87773 28 - -
27227 1.38629 1.38629 1.38629 1.38629
27228 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27229 29 2.98791 3.64678 0.11090 3.55766 29 - -
27230 1.38629 1.38629 1.38629 1.38629
27231 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27232 30 3.14806 2.63290 3.19393 0.16938 30 - -
27233 1.38629 1.38629 1.38629 1.38629
27234 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27235 31 2.98791 3.64678 0.11090 3.55766 31 - -
27236 1.38629 1.38629 1.38629 1.38629
27237 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27238 32 2.96561 2.20742 3.01855 0.23621 32 - -
27239 1.38629 1.38629 1.38629 1.38629
27240 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27241 33 2.98791 3.64678 0.11090 3.55766 33 - -
27242 1.38629 1.38629 1.38629 1.38629
27243 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27244 34 3.14806 2.63290 3.19393 0.16938 34 - -
27245 1.38629 1.38629 1.38629 1.38629
27246 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27247 35 3.50040 0.12246 3.54695 2.87773 35 - -
27248 1.38629 1.38629 1.38629 1.38629
27249 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27250 36 2.98791 3.64678 0.11090 3.55766 36 - -
27251 1.38629 1.38629 1.38629 1.38629
27252 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27253 37 0.13441 3.43877 2.83979 3.34604 37 - -
27254 1.38629 1.38629 1.38629 1.38629
27255 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27256 38 3.14806 2.63290 3.19393 0.16938 38 - -
27257 1.38629 1.38629 1.38629 1.38629
27258 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27259 39 2.98791 3.64678 0.11090 3.55766 39 - -
27260 1.38629 1.38629 1.38629 1.38629
27261 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27262 40 0.13441 3.43877 2.83979 3.34604 40 - -
27263 1.38629 1.38629 1.38629 1.38629
27264 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27265 41 0.13441 3.43877 2.83979 3.34604 41 - -
27266 1.38629 1.38629 1.38629 1.38629
27267 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27268 42 2.98791 3.64678 0.11090 3.55766 42 - -
27269 1.38629 1.38629 1.38629 1.38629
27270 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27271 43 0.13441 3.43877 2.83979 3.34604 43 - -
27272 1.38629 1.38629 1.38629 1.38629
27273 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27274 44 2.98791 3.64678 0.11090 3.55766 44 - -
27275 1.38629 1.38629 1.38629 1.38629
27276 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547
27277 45 3.50040 0.12246 3.54695 2.87773 45 - -
27278 1.38629 1.38629 1.38629 1.38629
27279 0.01798 4.02736 * 1.46634 0.26236 0.00000 *
27280 //
27281 HMMER3/b [3.0 | March 2010]
27282 NAME 2_5.8_Metazoa_58S_start_oneo_long
27283 LENG 45
27284 ALPH DNA
27285 RF no
27286 CS no
27287 MAP yes
27288 DATE Fri Feb 24 23:13:05 2012
27289 NSEQ 4
27290 EFFN 3.183594
27291 CKSUM 3162319453
27292 STATS LOCAL MSV -7.9834 0.71933
27293 STATS LOCAL VITERBI -7.8581 0.71933
27294 STATS LOCAL FORWARD -4.2189 0.71933
27295 HMM A C G T
27296 m->m m->i m->d i->m i->i d->m d->d
27297 COMPO 1.62781 1.39287 1.14320 1.44187
27298 1.38629 1.38629 1.38629 1.38629
27299 0.03786 3.98594 3.98594 1.46634 0.26236 0.00000 *
27300 1 0.14807 3.33468 2.77222 3.23207 1 - -
27301 1.38629 1.38629 1.38629 1.38629
27302 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27303 2 3.38051 0.13666 3.43217 2.79055 2 - -
27304 1.38629 1.38629 1.38629 1.38629
27305 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27306 3 0.14807 3.33468 2.77222 3.23207 3 - -
27307 1.38629 1.38629 1.38629 1.38629
27308 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27309 4 3.38051 0.13666 3.43217 2.79055 4 - -
27310 1.38629 1.38629 1.38629 1.38629
27311 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27312 5 3.04283 2.56598 3.09273 0.18624 5 - -
27313 1.38629 1.38629 1.38629 1.38629
27314 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27315 6 3.38051 0.13666 3.43217 2.79055 6 - -
27316 1.38629 1.38629 1.38629 1.38629
27317 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27318 7 3.04283 2.56598 3.09273 0.18624 7 - -
27319 1.38629 1.38629 1.38629 1.38629
27320 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27321 8 3.04283 2.56598 3.09273 0.18624 8 - -
27322 1.38629 1.38629 1.38629 1.38629
27323 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27324 9 2.91546 3.54130 0.12237 3.44120 9 - -
27325 1.38629 1.38629 1.38629 1.38629
27326 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27327 10 2.91546 3.54130 0.12237 3.44120 10 - -
27328 1.38629 1.38629 1.38629 1.38629
27329 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27330 11 3.38051 0.13666 3.43217 2.79055 11 - -
27331 1.38629 1.38629 1.38629 1.38629
27332 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27333 12 2.91546 3.54130 0.12237 3.44120 12 - -
27334 1.38629 1.38629 1.38629 1.38629
27335 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27336 13 2.91546 3.54130 0.12237 3.44120 13 - -
27337 1.38629 1.38629 1.38629 1.38629
27338 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27339 14 3.04283 2.56598 3.09273 0.18624 14 - -
27340 1.38629 1.38629 1.38629 1.38629
27341 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27342 15 2.91546 3.54130 0.12237 3.44120 15 - -
27343 1.38629 1.38629 1.38629 1.38629
27344 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27345 16 2.91546 3.54130 0.12237 3.44120 16 - -
27346 1.38629 1.38629 1.38629 1.38629
27347 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27348 17 0.14807 3.33468 2.77222 3.23207 17 - -
27349 1.38629 1.38629 1.38629 1.38629
27350 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27351 18 3.04283 2.56598 3.09273 0.18624 18 - -
27352 1.38629 1.38629 1.38629 1.38629
27353 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27354 19 3.38051 0.13666 3.43217 2.79055 19 - -
27355 1.38629 1.38629 1.38629 1.38629
27356 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27357 20 0.14807 3.33468 2.77222 3.23207 20 - -
27358 1.38629 1.38629 1.38629 1.38629
27359 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27360 21 3.38051 0.13666 3.43217 2.79055 21 - -
27361 1.38629 1.38629 1.38629 1.38629
27362 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27363 22 3.04283 2.56598 3.09273 0.18624 22 - -
27364 1.38629 1.38629 1.38629 1.38629
27365 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27366 23 3.38051 0.13666 3.43217 2.79055 23 - -
27367 1.38629 1.38629 1.38629 1.38629
27368 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27369 24 2.91546 3.54130 0.12237 3.44120 24 - -
27370 1.38629 1.38629 1.38629 1.38629
27371 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27372 25 2.91546 3.54130 0.12237 3.44120 25 - -
27373 1.38629 1.38629 1.38629 1.38629
27374 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27375 26 3.04283 2.56598 3.09273 0.18624 26 - -
27376 1.38629 1.38629 1.38629 1.38629
27377 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27378 27 3.04283 2.56598 3.09273 0.18624 27 - -
27379 1.38629 1.38629 1.38629 1.38629
27380 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27381 28 3.38051 0.13666 3.43217 2.79055 28 - -
27382 1.38629 1.38629 1.38629 1.38629
27383 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27384 29 2.91546 3.54130 0.12237 3.44120 29 - -
27385 1.38629 1.38629 1.38629 1.38629
27386 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27387 30 3.04283 2.56598 3.09273 0.18624 30 - -
27388 1.38629 1.38629 1.38629 1.38629
27389 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27390 31 2.91546 3.54130 0.12237 3.44120 31 - -
27391 1.38629 1.38629 1.38629 1.38629
27392 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27393 32 3.38051 0.13666 3.43217 2.79055 32 - -
27394 1.38629 1.38629 1.38629 1.38629
27395 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27396 33 2.91546 3.54130 0.12237 3.44120 33 - -
27397 1.38629 1.38629 1.38629 1.38629
27398 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27399 34 3.04283 2.56598 3.09273 0.18624 34 - -
27400 1.38629 1.38629 1.38629 1.38629
27401 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27402 35 3.38051 0.13666 3.43217 2.79055 35 - -
27403 1.38629 1.38629 1.38629 1.38629
27404 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27405 36 2.91546 3.54130 0.12237 3.44120 36 - -
27406 1.38629 1.38629 1.38629 1.38629
27407 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27408 37 0.14807 3.33468 2.77222 3.23207 37 - -
27409 1.38629 1.38629 1.38629 1.38629
27410 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27411 38 3.04283 2.56598 3.09273 0.18624 38 - -
27412 1.38629 1.38629 1.38629 1.38629
27413 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27414 39 2.91546 3.54130 0.12237 3.44120 39 - -
27415 1.38629 1.38629 1.38629 1.38629
27416 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27417 40 0.14807 3.33468 2.77222 3.23207 40 - -
27418 1.38629 1.38629 1.38629 1.38629
27419 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27420 41 0.14807 3.33468 2.77222 3.23207 41 - -
27421 1.38629 1.38629 1.38629 1.38629
27422 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27423 42 2.91546 3.54130 0.12237 3.44120 42 - -
27424 1.38629 1.38629 1.38629 1.38629
27425 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27426 43 0.14807 3.33468 2.77222 3.23207 43 - -
27427 1.38629 1.38629 1.38629 1.38629
27428 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27429 44 2.91546 3.54130 0.12237 3.44120 44 - -
27430 1.38629 1.38629 1.38629 1.38629
27431 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
27432 45 3.38051 0.13666 3.43217 2.79055 45 - -
27433 1.38629 1.38629 1.38629 1.38629
27434 0.01911 3.96719 * 1.46634 0.26236 0.00000 *
27435 //
27436 HMMER3/b [3.0 | March 2010]
27437 NAME 2_5.8_Metazoa_58S_start_onep_long
27438 LENG 45
27439 ALPH DNA
27440 RF no
27441 CS no
27442 MAP yes
27443 DATE Fri Feb 24 23:13:11 2012
27444 NSEQ 2
27445 EFFN 2.000000
27446 CKSUM 1940936314
27447 STATS LOCAL MSV -7.3708 0.72759
27448 STATS LOCAL VITERBI -8.1974 0.72759
27449 STATS LOCAL FORWARD -3.7751 0.72759
27450 HMM A C G T
27451 m->m m->i m->d i->m i->i d->m d->d
27452 COMPO 1.52005 1.34721 1.21583 1.49224
27453 1.38629 1.38629 1.38629 1.38629
27454 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
27455 1 2.81865 0.23582 2.88868 2.35662 1 - -
27456 1.38629 1.38629 1.38629 1.38629
27457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27458 2 0.23862 2.84929 2.43386 2.70756 2 - -
27459 1.38629 1.38629 1.38629 1.38629
27460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27461 3 0.23862 2.84929 2.43386 2.70756 3 - -
27462 1.38629 1.38629 1.38629 1.38629
27463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27464 4 2.81865 0.23582 2.88868 2.35662 4 - -
27465 1.38629 1.38629 1.38629 1.38629
27466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27467 5 2.57915 2.25909 2.64442 0.28946 5 - -
27468 1.38629 1.38629 1.38629 1.38629
27469 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27470 6 2.81865 0.23582 2.88868 2.35662 6 - -
27471 1.38629 1.38629 1.38629 1.38629
27472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27473 7 2.57915 2.25909 2.64442 0.28946 7 - -
27474 1.38629 1.38629 1.38629 1.38629
27475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27476 8 0.23862 2.84929 2.43386 2.70756 8 - -
27477 1.38629 1.38629 1.38629 1.38629
27478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27479 9 2.57915 2.25909 2.64442 0.28946 9 - -
27480 1.38629 1.38629 1.38629 1.38629
27481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27482 10 2.53331 3.02441 0.20344 2.88069 10 - -
27483 1.38629 1.38629 1.38629 1.38629
27484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27485 11 2.81865 0.23582 2.88868 2.35662 11 - -
27486 1.38629 1.38629 1.38629 1.38629
27487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27488 12 2.53331 3.02441 0.20344 2.88069 12 - -
27489 1.38629 1.38629 1.38629 1.38629
27490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27491 13 2.53331 3.02441 0.20344 2.88069 13 - -
27492 1.38629 1.38629 1.38629 1.38629
27493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27494 14 2.57915 2.25909 2.64442 0.28946 14 - -
27495 1.38629 1.38629 1.38629 1.38629
27496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27497 15 2.53331 3.02441 0.20344 2.88069 15 - -
27498 1.38629 1.38629 1.38629 1.38629
27499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27500 16 2.53331 3.02441 0.20344 2.88069 16 - -
27501 1.38629 1.38629 1.38629 1.38629
27502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27503 17 0.23862 2.84929 2.43386 2.70756 17 - -
27504 1.38629 1.38629 1.38629 1.38629
27505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27506 18 2.57915 2.25909 2.64442 0.28946 18 - -
27507 1.38629 1.38629 1.38629 1.38629
27508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27509 19 2.81865 0.23582 2.88868 2.35662 19 - -
27510 1.38629 1.38629 1.38629 1.38629
27511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27512 20 0.23862 2.84929 2.43386 2.70756 20 - -
27513 1.38629 1.38629 1.38629 1.38629
27514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27515 21 2.81865 0.23582 2.88868 2.35662 21 - -
27516 1.38629 1.38629 1.38629 1.38629
27517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27518 22 2.57915 2.25909 2.64442 0.28946 22 - -
27519 1.38629 1.38629 1.38629 1.38629
27520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27521 23 2.81865 0.23582 2.88868 2.35662 23 - -
27522 1.38629 1.38629 1.38629 1.38629
27523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27524 24 2.53331 3.02441 0.20344 2.88069 24 - -
27525 1.38629 1.38629 1.38629 1.38629
27526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27527 25 2.53331 3.02441 0.20344 2.88069 25 - -
27528 1.38629 1.38629 1.38629 1.38629
27529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27530 26 2.81865 0.23582 2.88868 2.35662 26 - -
27531 1.38629 1.38629 1.38629 1.38629
27532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27533 27 2.57915 2.25909 2.64442 0.28946 27 - -
27534 1.38629 1.38629 1.38629 1.38629
27535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27536 28 2.81865 0.23582 2.88868 2.35662 28 - -
27537 1.38629 1.38629 1.38629 1.38629
27538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27539 29 2.53331 3.02441 0.20344 2.88069 29 - -
27540 1.38629 1.38629 1.38629 1.38629
27541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27542 30 2.57915 2.25909 2.64442 0.28946 30 - -
27543 1.38629 1.38629 1.38629 1.38629
27544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27545 31 2.53331 3.02441 0.20344 2.88069 31 - -
27546 1.38629 1.38629 1.38629 1.38629
27547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27548 32 2.81865 0.23582 2.88868 2.35662 32 - -
27549 1.38629 1.38629 1.38629 1.38629
27550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27551 33 2.53331 3.02441 0.20344 2.88069 33 - -
27552 1.38629 1.38629 1.38629 1.38629
27553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27554 34 2.57915 2.25909 2.64442 0.28946 34 - -
27555 1.38629 1.38629 1.38629 1.38629
27556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27557 35 2.81865 0.23582 2.88868 2.35662 35 - -
27558 1.38629 1.38629 1.38629 1.38629
27559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27560 36 2.53331 3.02441 0.20344 2.88069 36 - -
27561 1.38629 1.38629 1.38629 1.38629
27562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27563 37 0.23862 2.84929 2.43386 2.70756 37 - -
27564 1.38629 1.38629 1.38629 1.38629
27565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27566 38 2.57915 2.25909 2.64442 0.28946 38 - -
27567 1.38629 1.38629 1.38629 1.38629
27568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27569 39 2.53331 3.02441 0.20344 2.88069 39 - -
27570 1.38629 1.38629 1.38629 1.38629
27571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27572 40 0.23862 2.84929 2.43386 2.70756 40 - -
27573 1.38629 1.38629 1.38629 1.38629
27574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27575 41 0.23862 2.84929 2.43386 2.70756 41 - -
27576 1.38629 1.38629 1.38629 1.38629
27577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27578 42 2.53331 3.02441 0.20344 2.88069 42 - -
27579 1.38629 1.38629 1.38629 1.38629
27580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27581 43 0.23862 2.84929 2.43386 2.70756 43 - -
27582 1.38629 1.38629 1.38629 1.38629
27583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27584 44 2.53331 3.02441 0.20344 2.88069 44 - -
27585 1.38629 1.38629 1.38629 1.38629
27586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27587 45 2.81865 0.23582 2.88868 2.35662 45 - -
27588 1.38629 1.38629 1.38629 1.38629
27589 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
27590 //
27591 HMMER3/b [3.0 | March 2010]
27592 NAME 2_5.8_Metazoa_58S_start_oneq_long
27593 LENG 45
27594 ALPH DNA
27595 RF no
27596 CS no
27597 MAP yes
27598 DATE Fri Feb 24 23:13:16 2012
27599 NSEQ 2
27600 EFFN 2.000000
27601 CKSUM 3036652137
27602 STATS LOCAL MSV -7.5069 0.72803
27603 STATS LOCAL VITERBI -8.2859 0.72803
27604 STATS LOCAL FORWARD -3.3219 0.72803
27605 HMM A C G T
27606 m->m m->i m->d i->m i->i d->m d->d
27607 COMPO 1.37220 1.35028 1.24302 1.61559
27608 1.38629 1.38629 1.38629 1.38629
27609 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
27610 1 2.81865 0.23582 2.88868 2.35662 1 - -
27611 1.38629 1.38629 1.38629 1.38629
27612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27613 2 0.23862 2.84929 2.43386 2.70756 2 - -
27614 1.38629 1.38629 1.38629 1.38629
27615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27616 3 0.23862 2.84929 2.43386 2.70756 3 - -
27617 1.38629 1.38629 1.38629 1.38629
27618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27619 4 2.81865 0.23582 2.88868 2.35662 4 - -
27620 1.38629 1.38629 1.38629 1.38629
27621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27622 5 2.57915 2.25909 2.64442 0.28946 5 - -
27623 1.38629 1.38629 1.38629 1.38629
27624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27625 6 2.81865 0.23582 2.88868 2.35662 6 - -
27626 1.38629 1.38629 1.38629 1.38629
27627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27628 7 2.57915 2.25909 2.64442 0.28946 7 - -
27629 1.38629 1.38629 1.38629 1.38629
27630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27631 8 2.53331 3.02441 0.20344 2.88069 8 - -
27632 1.38629 1.38629 1.38629 1.38629
27633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27634 9 0.92825 2.28391 0.95698 2.13014 9 - -
27635 1.38629 1.38629 1.38629 1.38629
27636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27637 10 2.53331 3.02441 0.20344 2.88069 10 - -
27638 1.38629 1.38629 1.38629 1.38629
27639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27640 11 2.81865 0.23582 2.88868 2.35662 11 - -
27641 1.38629 1.38629 1.38629 1.38629
27642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27643 12 0.23862 2.84929 2.43386 2.70756 12 - -
27644 1.38629 1.38629 1.38629 1.38629
27645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27646 13 2.53331 3.02441 0.20344 2.88069 13 - -
27647 1.38629 1.38629 1.38629 1.38629
27648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27649 14 2.57915 2.25909 2.64442 0.28946 14 - -
27650 1.38629 1.38629 1.38629 1.38629
27651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27652 15 2.53331 3.02441 0.20344 2.88069 15 - -
27653 1.38629 1.38629 1.38629 1.38629
27654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27655 16 2.53331 3.02441 0.20344 2.88069 16 - -
27656 1.38629 1.38629 1.38629 1.38629
27657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27658 17 0.23862 2.84929 2.43386 2.70756 17 - -
27659 1.38629 1.38629 1.38629 1.38629
27660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27661 18 2.57915 2.25909 2.64442 0.28946 18 - -
27662 1.38629 1.38629 1.38629 1.38629
27663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27664 19 2.81865 0.23582 2.88868 2.35662 19 - -
27665 1.38629 1.38629 1.38629 1.38629
27666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27667 20 0.23862 2.84929 2.43386 2.70756 20 - -
27668 1.38629 1.38629 1.38629 1.38629
27669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27670 21 2.81865 0.23582 2.88868 2.35662 21 - -
27671 1.38629 1.38629 1.38629 1.38629
27672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27673 22 2.57915 2.25909 2.64442 0.28946 22 - -
27674 1.38629 1.38629 1.38629 1.38629
27675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27676 23 2.81865 0.23582 2.88868 2.35662 23 - -
27677 1.38629 1.38629 1.38629 1.38629
27678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27679 24 2.53331 3.02441 0.20344 2.88069 24 - -
27680 1.38629 1.38629 1.38629 1.38629
27681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27682 25 2.53331 3.02441 0.20344 2.88069 25 - -
27683 1.38629 1.38629 1.38629 1.38629
27684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27685 26 2.81865 0.23582 2.88868 2.35662 26 - -
27686 1.38629 1.38629 1.38629 1.38629
27687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27688 27 2.57915 2.25909 2.64442 0.28946 27 - -
27689 1.38629 1.38629 1.38629 1.38629
27690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27691 28 2.81865 0.23582 2.88868 2.35662 28 - -
27692 1.38629 1.38629 1.38629 1.38629
27693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27694 29 0.23862 2.84929 2.43386 2.70756 29 - -
27695 1.38629 1.38629 1.38629 1.38629
27696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27697 30 2.81865 0.23582 2.88868 2.35662 30 - -
27698 1.38629 1.38629 1.38629 1.38629
27699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27700 31 2.53331 3.02441 0.20344 2.88069 31 - -
27701 1.38629 1.38629 1.38629 1.38629
27702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27703 32 2.53331 3.02441 0.20344 2.88069 32 - -
27704 1.38629 1.38629 1.38629 1.38629
27705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27706 33 2.53331 3.02441 0.20344 2.88069 33 - -
27707 1.38629 1.38629 1.38629 1.38629
27708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27709 34 2.57915 2.25909 2.64442 0.28946 34 - -
27710 1.38629 1.38629 1.38629 1.38629
27711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27712 35 2.81865 0.23582 2.88868 2.35662 35 - -
27713 1.38629 1.38629 1.38629 1.38629
27714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27715 36 2.53331 3.02441 0.20344 2.88069 36 - -
27716 1.38629 1.38629 1.38629 1.38629
27717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27718 37 0.23862 2.84929 2.43386 2.70756 37 - -
27719 1.38629 1.38629 1.38629 1.38629
27720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27721 38 2.57915 2.25909 2.64442 0.28946 38 - -
27722 1.38629 1.38629 1.38629 1.38629
27723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27724 39 2.53331 3.02441 0.20344 2.88069 39 - -
27725 1.38629 1.38629 1.38629 1.38629
27726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27727 40 0.23862 2.84929 2.43386 2.70756 40 - -
27728 1.38629 1.38629 1.38629 1.38629
27729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27730 41 0.23862 2.84929 2.43386 2.70756 41 - -
27731 1.38629 1.38629 1.38629 1.38629
27732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27733 42 2.53331 3.02441 0.20344 2.88069 42 - -
27734 1.38629 1.38629 1.38629 1.38629
27735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27736 43 0.23862 2.84929 2.43386 2.70756 43 - -
27737 1.38629 1.38629 1.38629 1.38629
27738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27739 44 0.23862 2.84929 2.43386 2.70756 44 - -
27740 1.38629 1.38629 1.38629 1.38629
27741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27742 45 2.81865 0.23582 2.88868 2.35662 45 - -
27743 1.38629 1.38629 1.38629 1.38629
27744 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
27745 //
27746 HMMER3/b [3.0 | March 2010]
27747 NAME 2_5.8_Metazoa_58S_start_oner_long
27748 LENG 45
27749 ALPH DNA
27750 RF no
27751 CS no
27752 MAP yes
27753 DATE Fri Feb 24 23:13:21 2012
27754 NSEQ 8
27755 EFFN 3.199219
27756 CKSUM 1827277924
27757 STATS LOCAL MSV -8.0167 0.71933
27758 STATS LOCAL VITERBI -7.6622 0.71933
27759 STATS LOCAL FORWARD -4.3529 0.71933
27760 HMM A C G T
27761 m->m m->i m->d i->m i->i d->m d->d
27762 COMPO 1.72054 1.38848 1.14415 1.37404
27763 1.38629 1.38629 1.38629 1.38629
27764 0.03775 3.98884 3.98884 1.46634 0.26236 0.00000 *
27765 1 3.38655 0.13590 3.43796 2.79498 1 - -
27766 1.38629 1.38629 1.38629 1.38629
27767 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27768 2 3.04806 2.56931 3.09775 0.18535 2 - -
27769 1.38629 1.38629 1.38629 1.38629
27770 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27771 3 0.14734 3.33991 2.77563 3.23778 3 - -
27772 1.38629 1.38629 1.38629 1.38629
27773 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27774 4 3.38655 0.13590 3.43796 2.79498 4 - -
27775 1.38629 1.38629 1.38629 1.38629
27776 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27777 5 3.04806 2.56931 3.09775 0.18535 5 - -
27778 1.38629 1.38629 1.38629 1.38629
27779 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27780 6 3.38655 0.13590 3.43796 2.79498 6 - -
27781 1.38629 1.38629 1.38629 1.38629
27782 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27783 7 3.04806 2.56931 3.09775 0.18535 7 - -
27784 1.38629 1.38629 1.38629 1.38629
27785 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27786 8 2.91917 3.54665 0.12176 3.44709 8 - -
27787 1.38629 1.38629 1.38629 1.38629
27788 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27789 9 3.04806 2.56931 3.09775 0.18535 9 - -
27790 1.38629 1.38629 1.38629 1.38629
27791 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27792 10 2.91917 3.54665 0.12176 3.44709 10 - -
27793 1.38629 1.38629 1.38629 1.38629
27794 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27795 11 3.38655 0.13590 3.43796 2.79498 11 - -
27796 1.38629 1.38629 1.38629 1.38629
27797 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27798 12 2.91917 3.54665 0.12176 3.44709 12 - -
27799 1.38629 1.38629 1.38629 1.38629
27800 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27801 13 2.91917 3.54665 0.12176 3.44709 13 - -
27802 1.38629 1.38629 1.38629 1.38629
27803 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27804 14 3.04806 2.56931 3.09775 0.18535 14 - -
27805 1.38629 1.38629 1.38629 1.38629
27806 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27807 15 2.91917 3.54665 0.12176 3.44709 15 - -
27808 1.38629 1.38629 1.38629 1.38629
27809 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27810 16 2.91917 3.54665 0.12176 3.44709 16 - -
27811 1.38629 1.38629 1.38629 1.38629
27812 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27813 17 0.14734 3.33991 2.77563 3.23778 17 - -
27814 1.38629 1.38629 1.38629 1.38629
27815 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27816 18 3.04806 2.56931 3.09775 0.18535 18 - -
27817 1.38629 1.38629 1.38629 1.38629
27818 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27819 19 3.38655 0.13590 3.43796 2.79498 19 - -
27820 1.38629 1.38629 1.38629 1.38629
27821 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27822 20 0.14734 3.33991 2.77563 3.23778 20 - -
27823 1.38629 1.38629 1.38629 1.38629
27824 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27825 21 3.38655 0.13590 3.43796 2.79498 21 - -
27826 1.38629 1.38629 1.38629 1.38629
27827 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27828 22 3.04806 2.56931 3.09775 0.18535 22 - -
27829 1.38629 1.38629 1.38629 1.38629
27830 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27831 23 3.38655 0.13590 3.43796 2.79498 23 - -
27832 1.38629 1.38629 1.38629 1.38629
27833 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27834 24 2.91917 3.54665 0.12176 3.44709 24 - -
27835 1.38629 1.38629 1.38629 1.38629
27836 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27837 25 2.91917 3.54665 0.12176 3.44709 25 - -
27838 1.38629 1.38629 1.38629 1.38629
27839 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27840 26 3.38655 0.13590 3.43796 2.79498 26 - -
27841 1.38629 1.38629 1.38629 1.38629
27842 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27843 27 3.04806 2.56931 3.09775 0.18535 27 - -
27844 1.38629 1.38629 1.38629 1.38629
27845 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27846 28 3.38655 0.13590 3.43796 2.79498 28 - -
27847 1.38629 1.38629 1.38629 1.38629
27848 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27849 29 2.91917 3.54665 0.12176 3.44709 29 - -
27850 1.38629 1.38629 1.38629 1.38629
27851 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27852 30 3.04806 2.56931 3.09775 0.18535 30 - -
27853 1.38629 1.38629 1.38629 1.38629
27854 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27855 31 2.91917 3.54665 0.12176 3.44709 31 - -
27856 1.38629 1.38629 1.38629 1.38629
27857 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27858 32 3.04806 2.56931 3.09775 0.18535 32 - -
27859 1.38629 1.38629 1.38629 1.38629
27860 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27861 33 2.91917 3.54665 0.12176 3.44709 33 - -
27862 1.38629 1.38629 1.38629 1.38629
27863 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27864 34 3.04806 2.56931 3.09775 0.18535 34 - -
27865 1.38629 1.38629 1.38629 1.38629
27866 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27867 35 3.38655 0.13590 3.43796 2.79498 35 - -
27868 1.38629 1.38629 1.38629 1.38629
27869 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27870 36 2.91917 3.54665 0.12176 3.44709 36 - -
27871 1.38629 1.38629 1.38629 1.38629
27872 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27873 37 0.14734 3.33991 2.77563 3.23778 37 - -
27874 1.38629 1.38629 1.38629 1.38629
27875 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27876 38 3.04806 2.56931 3.09775 0.18535 38 - -
27877 1.38629 1.38629 1.38629 1.38629
27878 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27879 39 2.91917 3.54665 0.12176 3.44709 39 - -
27880 1.38629 1.38629 1.38629 1.38629
27881 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27882 40 0.14734 3.33991 2.77563 3.23778 40 - -
27883 1.38629 1.38629 1.38629 1.38629
27884 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27885 41 0.14734 3.33991 2.77563 3.23778 41 - -
27886 1.38629 1.38629 1.38629 1.38629
27887 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27888 42 2.91917 3.54665 0.12176 3.44709 42 - -
27889 1.38629 1.38629 1.38629 1.38629
27890 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27891 43 0.14734 3.33991 2.77563 3.23778 43 - -
27892 1.38629 1.38629 1.38629 1.38629
27893 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27894 44 2.91917 3.54665 0.12176 3.44709 44 - -
27895 1.38629 1.38629 1.38629 1.38629
27896 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
27897 45 3.38655 0.13590 3.43796 2.79498 45 - -
27898 1.38629 1.38629 1.38629 1.38629
27899 0.01905 3.97014 * 1.46634 0.26236 0.00000 *
27900 //
27901 HMMER3/b [3.0 | March 2010]
27902 NAME 2_5.8_Metazoa_58S_start_ones_long
27903 LENG 45
27904 ALPH DNA
27905 RF no
27906 CS no
27907 MAP yes
27908 DATE Fri Feb 24 23:13:29 2012
27909 NSEQ 2
27910 EFFN 2.000000
27911 CKSUM 3483693243
27912 STATS LOCAL MSV -7.4492 0.72782
27913 STATS LOCAL VITERBI -8.1187 0.72782
27914 STATS LOCAL FORWARD -3.4857 0.72782
27915 HMM A C G T
27916 m->m m->i m->d i->m i->i d->m d->d
27917 COMPO 1.29189 1.29167 1.43650 1.54798
27918 1.38629 1.38629 1.38629 1.38629
27919 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
27920 1 2.81865 0.23582 2.88868 2.35662 1 - -
27921 1.38629 1.38629 1.38629 1.38629
27922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27923 2 2.81865 0.23582 2.88868 2.35662 2 - -
27924 1.38629 1.38629 1.38629 1.38629
27925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27926 3 0.23862 2.84929 2.43386 2.70756 3 - -
27927 1.38629 1.38629 1.38629 1.38629
27928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27929 4 2.81865 0.23582 2.88868 2.35662 4 - -
27930 1.38629 1.38629 1.38629 1.38629
27931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27932 5 2.57915 2.25909 2.64442 0.28946 5 - -
27933 1.38629 1.38629 1.38629 1.38629
27934 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27935 6 2.57915 2.25909 2.64442 0.28946 6 - -
27936 1.38629 1.38629 1.38629 1.38629
27937 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27938 7 2.57915 2.25909 2.64442 0.28946 7 - -
27939 1.38629 1.38629 1.38629 1.38629
27940 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27941 8 0.23862 2.84929 2.43386 2.70756 8 - -
27942 1.38629 1.38629 1.38629 1.38629
27943 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27944 9 0.23862 2.84929 2.43386 2.70756 9 - -
27945 1.38629 1.38629 1.38629 1.38629
27946 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27947 10 2.53331 3.02441 0.20344 2.88069 10 - -
27948 1.38629 1.38629 1.38629 1.38629
27949 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27950 11 2.81865 0.23582 2.88868 2.35662 11 - -
27951 1.38629 1.38629 1.38629 1.38629
27952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27953 12 2.53331 3.02441 0.20344 2.88069 12 - -
27954 1.38629 1.38629 1.38629 1.38629
27955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27956 13 0.23862 2.84929 2.43386 2.70756 13 - -
27957 1.38629 1.38629 1.38629 1.38629
27958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27959 14 2.57915 2.25909 2.64442 0.28946 14 - -
27960 1.38629 1.38629 1.38629 1.38629
27961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27962 15 2.53331 3.02441 0.20344 2.88069 15 - -
27963 1.38629 1.38629 1.38629 1.38629
27964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27965 16 2.53331 3.02441 0.20344 2.88069 16 - -
27966 1.38629 1.38629 1.38629 1.38629
27967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27968 17 0.23862 2.84929 2.43386 2.70756 17 - -
27969 1.38629 1.38629 1.38629 1.38629
27970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27971 18 2.57915 2.25909 2.64442 0.28946 18 - -
27972 1.38629 1.38629 1.38629 1.38629
27973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27974 19 2.81865 0.23582 2.88868 2.35662 19 - -
27975 1.38629 1.38629 1.38629 1.38629
27976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27977 20 0.23862 2.84929 2.43386 2.70756 20 - -
27978 1.38629 1.38629 1.38629 1.38629
27979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27980 21 2.81865 0.23582 2.88868 2.35662 21 - -
27981 1.38629 1.38629 1.38629 1.38629
27982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27983 22 2.57915 2.25909 2.64442 0.28946 22 - -
27984 1.38629 1.38629 1.38629 1.38629
27985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27986 23 2.81865 0.23582 2.88868 2.35662 23 - -
27987 1.38629 1.38629 1.38629 1.38629
27988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27989 24 2.53331 3.02441 0.20344 2.88069 24 - -
27990 1.38629 1.38629 1.38629 1.38629
27991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27992 25 2.53331 3.02441 0.20344 2.88069 25 - -
27993 1.38629 1.38629 1.38629 1.38629
27994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27995 26 2.81865 0.23582 2.88868 2.35662 26 - -
27996 1.38629 1.38629 1.38629 1.38629
27997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27998 27 2.57915 2.25909 2.64442 0.28946 27 - -
27999 1.38629 1.38629 1.38629 1.38629
28000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28001 28 2.81865 0.23582 2.88868 2.35662 28 - -
28002 1.38629 1.38629 1.38629 1.38629
28003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28004 29 0.23862 2.84929 2.43386 2.70756 29 - -
28005 1.38629 1.38629 1.38629 1.38629
28006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28007 30 2.81865 0.23582 2.88868 2.35662 30 - -
28008 1.38629 1.38629 1.38629 1.38629
28009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28010 31 0.23862 2.84929 2.43386 2.70756 31 - -
28011 1.38629 1.38629 1.38629 1.38629
28012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28013 32 2.81865 0.23582 2.88868 2.35662 32 - -
28014 1.38629 1.38629 1.38629 1.38629
28015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28016 33 2.53331 3.02441 0.20344 2.88069 33 - -
28017 1.38629 1.38629 1.38629 1.38629
28018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28019 34 2.57915 2.25909 2.64442 0.28946 34 - -
28020 1.38629 1.38629 1.38629 1.38629
28021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28022 35 2.81865 0.23582 2.88868 2.35662 35 - -
28023 1.38629 1.38629 1.38629 1.38629
28024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28025 36 2.53331 3.02441 0.20344 2.88069 36 - -
28026 1.38629 1.38629 1.38629 1.38629
28027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28028 37 0.23862 2.84929 2.43386 2.70756 37 - -
28029 1.38629 1.38629 1.38629 1.38629
28030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28031 38 2.57915 2.25909 2.64442 0.28946 38 - -
28032 1.38629 1.38629 1.38629 1.38629
28033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28034 39 2.53331 3.02441 0.20344 2.88069 39 - -
28035 1.38629 1.38629 1.38629 1.38629
28036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28037 40 0.23862 2.84929 2.43386 2.70756 40 - -
28038 1.38629 1.38629 1.38629 1.38629
28039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28040 41 0.23862 2.84929 2.43386 2.70756 41 - -
28041 1.38629 1.38629 1.38629 1.38629
28042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28043 42 2.53331 3.02441 0.20344 2.88069 42 - -
28044 1.38629 1.38629 1.38629 1.38629
28045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28046 43 0.23862 2.84929 2.43386 2.70756 43 - -
28047 1.38629 1.38629 1.38629 1.38629
28048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28049 44 0.23862 2.84929 2.43386 2.70756 44 - -
28050 1.38629 1.38629 1.38629 1.38629
28051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
28052 45 2.81865 0.23582 2.88868 2.35662 45 - -
28053 1.38629 1.38629 1.38629 1.38629
28054 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
28055 //
28056 HMMER3/b [3.0 | March 2010]
28057 NAME 2_5.8_Metazoa_58S_start_onet_long
28058 LENG 45
28059 ALPH DNA
28060 RF no
28061 CS no
28062 MAP yes
28063 DATE Fri Feb 24 23:13:36 2012
28064 NSEQ 19
28065 EFFN 3.186768
28066 CKSUM 722966639
28067 STATS LOCAL MSV -8.0861 0.71934
28068 STATS LOCAL VITERBI -7.7379 0.71934
28069 STATS LOCAL FORWARD -4.2531 0.71934
28070 HMM A C G T
28071 m->m m->i m->d i->m i->i d->m d->d
28072 COMPO 1.54585 1.46628 1.14119 1.44118
28073 1.38629 1.38629 1.38629 1.38629
28074 0.03783 3.98653 3.98653 1.46634 0.26236 0.00000 *
28075 1 3.04390 2.56666 3.09375 0.18606 1 - -
28076 1.38629 1.38629 1.38629 1.38629
28077 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28078 2 0.14792 3.33575 2.77291 3.23323 2 - -
28079 1.38629 1.38629 1.38629 1.38629
28080 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28081 3 0.14792 3.33575 2.77291 3.23323 3 - -
28082 1.38629 1.38629 1.38629 1.38629
28083 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28084 4 3.38174 0.13651 3.43335 2.79145 4 - -
28085 1.38629 1.38629 1.38629 1.38629
28086 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28087 5 3.04390 2.56666 3.09375 0.18606 5 - -
28088 1.38629 1.38629 1.38629 1.38629
28089 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28090 6 3.04390 2.56666 3.09375 0.18606 6 - -
28091 1.38629 1.38629 1.38629 1.38629
28092 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28093 7 3.04390 2.56666 3.09375 0.18606 7 - -
28094 1.38629 1.38629 1.38629 1.38629
28095 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28096 8 2.91622 3.54239 0.12225 3.44240 8 - -
28097 1.38629 1.38629 1.38629 1.38629
28098 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28099 9 0.14792 3.33575 2.77291 3.23323 9 - -
28100 1.38629 1.38629 1.38629 1.38629
28101 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28102 10 2.91622 3.54239 0.12225 3.44240 10 - -
28103 1.38629 1.38629 1.38629 1.38629
28104 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28105 11 3.38174 0.13651 3.43335 2.79145 11 - -
28106 1.38629 1.38629 1.38629 1.38629
28107 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28108 12 2.91622 3.54239 0.12225 3.44240 12 - -
28109 1.38629 1.38629 1.38629 1.38629
28110 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28111 13 2.91622 3.54239 0.12225 3.44240 13 - -
28112 1.38629 1.38629 1.38629 1.38629
28113 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28114 14 3.04390 2.56666 3.09375 0.18606 14 - -
28115 1.38629 1.38629 1.38629 1.38629
28116 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28117 15 2.91622 3.54239 0.12225 3.44240 15 - -
28118 1.38629 1.38629 1.38629 1.38629
28119 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28120 16 2.91622 3.54239 0.12225 3.44240 16 - -
28121 1.38629 1.38629 1.38629 1.38629
28122 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28123 17 0.14792 3.33575 2.77291 3.23323 17 - -
28124 1.38629 1.38629 1.38629 1.38629
28125 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28126 18 3.04390 2.56666 3.09375 0.18606 18 - -
28127 1.38629 1.38629 1.38629 1.38629
28128 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28129 19 3.38174 0.13651 3.43335 2.79145 19 - -
28130 1.38629 1.38629 1.38629 1.38629
28131 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28132 20 0.14792 3.33575 2.77291 3.23323 20 - -
28133 1.38629 1.38629 1.38629 1.38629
28134 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28135 21 3.38174 0.13651 3.43335 2.79145 21 - -
28136 1.38629 1.38629 1.38629 1.38629
28137 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28138 22 3.04390 2.56666 3.09375 0.18606 22 - -
28139 1.38629 1.38629 1.38629 1.38629
28140 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28141 23 3.38174 0.13651 3.43335 2.79145 23 - -
28142 1.38629 1.38629 1.38629 1.38629
28143 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28144 24 2.91622 3.54239 0.12225 3.44240 24 - -
28145 1.38629 1.38629 1.38629 1.38629
28146 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28147 25 2.91622 3.54239 0.12225 3.44240 25 - -
28148 1.38629 1.38629 1.38629 1.38629
28149 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28150 26 3.38174 0.13651 3.43335 2.79145 26 - -
28151 1.38629 1.38629 1.38629 1.38629
28152 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28153 27 3.04390 2.56666 3.09375 0.18606 27 - -
28154 1.38629 1.38629 1.38629 1.38629
28155 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28156 28 3.38174 0.13651 3.43335 2.79145 28 - -
28157 1.38629 1.38629 1.38629 1.38629
28158 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28159 29 2.91622 3.54239 0.12225 3.44240 29 - -
28160 1.38629 1.38629 1.38629 1.38629
28161 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28162 30 3.04390 2.56666 3.09375 0.18606 30 - -
28163 1.38629 1.38629 1.38629 1.38629
28164 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28165 31 2.91622 3.54239 0.12225 3.44240 31 - -
28166 1.38629 1.38629 1.38629 1.38629
28167 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28168 32 3.38174 0.13651 3.43335 2.79145 32 - -
28169 1.38629 1.38629 1.38629 1.38629
28170 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28171 33 2.91622 3.54239 0.12225 3.44240 33 - -
28172 1.38629 1.38629 1.38629 1.38629
28173 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28174 34 3.04390 2.56666 3.09375 0.18606 34 - -
28175 1.38629 1.38629 1.38629 1.38629
28176 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28177 35 3.38174 0.13651 3.43335 2.79145 35 - -
28178 1.38629 1.38629 1.38629 1.38629
28179 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28180 36 2.91622 3.54239 0.12225 3.44240 36 - -
28181 1.38629 1.38629 1.38629 1.38629
28182 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28183 37 0.14792 3.33575 2.77291 3.23323 37 - -
28184 1.38629 1.38629 1.38629 1.38629
28185 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28186 38 3.04390 2.56666 3.09375 0.18606 38 - -
28187 1.38629 1.38629 1.38629 1.38629
28188 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28189 39 2.91622 3.54239 0.12225 3.44240 39 - -
28190 1.38629 1.38629 1.38629 1.38629
28191 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28192 40 0.14792 3.33575 2.77291 3.23323 40 - -
28193 1.38629 1.38629 1.38629 1.38629
28194 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28195 41 0.14792 3.33575 2.77291 3.23323 41 - -
28196 1.38629 1.38629 1.38629 1.38629
28197 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28198 42 2.91622 3.54239 0.12225 3.44240 42 - -
28199 1.38629 1.38629 1.38629 1.38629
28200 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28201 43 0.14792 3.33575 2.77291 3.23323 43 - -
28202 1.38629 1.38629 1.38629 1.38629
28203 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28204 44 2.91622 3.54239 0.12225 3.44240 44 - -
28205 1.38629 1.38629 1.38629 1.38629
28206 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547
28207 45 3.38174 0.13651 3.43335 2.79145 45 - -
28208 1.38629 1.38629 1.38629 1.38629
28209 0.01910 3.96779 * 1.46634 0.26236 0.00000 *
28210 //
28211 HMMER3/b [3.0 | March 2010]
28212 NAME 2_5.8_Metazoa_58S_start_sevena_long
28213 LENG 45
28214 ALPH DNA
28215 RF no
28216 CS no
28217 MAP yes
28218 DATE Fri Feb 24 23:21:03 2012
28219 NSEQ 33
28220 EFFN 3.226685
28221 CKSUM 3895814705
28222 STATS LOCAL MSV -8.1231 0.71932
28223 STATS LOCAL VITERBI -7.7927 0.71932
28224 STATS LOCAL FORWARD -4.2040 0.71932
28225 HMM A C G T
28226 m->m m->i m->d i->m i->i d->m d->d
28227 COMPO 1.26742 1.47087 1.25669 1.58904
28228 1.38629 1.38629 1.38629 1.38629
28229 0.03755 3.99391 3.99391 1.46634 0.26236 0.00000 *
28230 1 0.14609 3.34903 2.78159 3.24776 1 - -
28231 1.38629 1.38629 1.38629 1.38629
28232 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28233 2 0.14609 3.34903 2.78159 3.24776 2 - -
28234 1.38629 1.38629 1.38629 1.38629
28235 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28236 3 0.14609 3.34903 2.78159 3.24776 3 - -
28237 1.38629 1.38629 1.38629 1.38629
28238 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28239 4 3.39708 0.13459 3.44806 2.80270 4 - -
28240 1.38629 1.38629 1.38629 1.38629
28241 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28242 5 3.39708 0.13459 3.44806 2.80270 5 - -
28243 1.38629 1.38629 1.38629 1.38629
28244 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28245 6 3.05719 2.57514 3.10654 0.18382 6 - -
28246 1.38629 1.38629 1.38629 1.38629
28247 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28248 7 3.05719 2.57514 3.10654 0.18382 7 - -
28249 1.38629 1.38629 1.38629 1.38629
28250 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28251 8 0.14609 3.34903 2.78159 3.24776 8 - -
28252 1.38629 1.38629 1.38629 1.38629
28253 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28254 9 0.14609 3.34903 2.78159 3.24776 9 - -
28255 1.38629 1.38629 1.38629 1.38629
28256 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28257 10 0.14609 3.34903 2.78159 3.24776 10 - -
28258 1.38629 1.38629 1.38629 1.38629
28259 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28260 11 3.39708 0.13459 3.44806 2.80270 11 - -
28261 1.38629 1.38629 1.38629 1.38629
28262 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28263 12 2.18462 3.13998 0.22900 3.01864 12 - -
28264 1.38629 1.38629 1.38629 1.38629
28265 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28266 13 2.92562 3.55597 0.12070 3.45736 13 - -
28267 1.38629 1.38629 1.38629 1.38629
28268 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28269 14 2.92562 3.55597 0.12070 3.45736 14 - -
28270 1.38629 1.38629 1.38629 1.38629
28271 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28272 15 2.92562 3.55597 0.12070 3.45736 15 - -
28273 1.38629 1.38629 1.38629 1.38629
28274 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28275 16 2.92562 3.55597 0.12070 3.45736 16 - -
28276 1.38629 1.38629 1.38629 1.38629
28277 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28278 17 0.14609 3.34903 2.78159 3.24776 17 - -
28279 1.38629 1.38629 1.38629 1.38629
28280 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28281 18 3.05719 2.57514 3.10654 0.18382 18 - -
28282 1.38629 1.38629 1.38629 1.38629
28283 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28284 19 3.39708 0.13459 3.44806 2.80270 19 - -
28285 1.38629 1.38629 1.38629 1.38629
28286 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28287 20 0.14609 3.34903 2.78159 3.24776 20 - -
28288 1.38629 1.38629 1.38629 1.38629
28289 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28290 21 3.39708 0.13459 3.44806 2.80270 21 - -
28291 1.38629 1.38629 1.38629 1.38629
28292 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28293 22 3.05719 2.57514 3.10654 0.18382 22 - -
28294 1.38629 1.38629 1.38629 1.38629
28295 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28296 23 3.05719 2.57514 3.10654 0.18382 23 - -
28297 1.38629 1.38629 1.38629 1.38629
28298 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28299 24 2.92562 3.55597 0.12070 3.45736 24 - -
28300 1.38629 1.38629 1.38629 1.38629
28301 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28302 25 2.92562 3.55597 0.12070 3.45736 25 - -
28303 1.38629 1.38629 1.38629 1.38629
28304 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28305 26 3.39708 0.13459 3.44806 2.80270 26 - -
28306 1.38629 1.38629 1.38629 1.38629
28307 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28308 27 3.05719 2.57514 3.10654 0.18382 27 - -
28309 1.38629 1.38629 1.38629 1.38629
28310 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28311 28 3.39708 0.13459 3.44806 2.80270 28 - -
28312 1.38629 1.38629 1.38629 1.38629
28313 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28314 29 0.14609 3.34903 2.78159 3.24776 29 - -
28315 1.38629 1.38629 1.38629 1.38629
28316 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28317 30 3.05719 2.57514 3.10654 0.18382 30 - -
28318 1.38629 1.38629 1.38629 1.38629
28319 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28320 31 2.92562 3.55597 0.12070 3.45736 31 - -
28321 1.38629 1.38629 1.38629 1.38629
28322 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28323 32 2.92562 3.55597 0.12070 3.45736 32 - -
28324 1.38629 1.38629 1.38629 1.38629
28325 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28326 33 2.92562 3.55597 0.12070 3.45736 33 - -
28327 1.38629 1.38629 1.38629 1.38629
28328 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28329 34 3.05719 2.57514 3.10654 0.18382 34 - -
28330 1.38629 1.38629 1.38629 1.38629
28331 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28332 35 3.39708 0.13459 3.44806 2.80270 35 - -
28333 1.38629 1.38629 1.38629 1.38629
28334 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28335 36 2.92562 3.55597 0.12070 3.45736 36 - -
28336 1.38629 1.38629 1.38629 1.38629
28337 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28338 37 0.14609 3.34903 2.78159 3.24776 37 - -
28339 1.38629 1.38629 1.38629 1.38629
28340 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28341 38 3.05719 2.57514 3.10654 0.18382 38 - -
28342 1.38629 1.38629 1.38629 1.38629
28343 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28344 39 2.92562 3.55597 0.12070 3.45736 39 - -
28345 1.38629 1.38629 1.38629 1.38629
28346 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28347 40 0.14609 3.34903 2.78159 3.24776 40 - -
28348 1.38629 1.38629 1.38629 1.38629
28349 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28350 41 0.14609 3.34903 2.78159 3.24776 41 - -
28351 1.38629 1.38629 1.38629 1.38629
28352 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28353 42 2.92562 3.55597 0.12070 3.45736 42 - -
28354 1.38629 1.38629 1.38629 1.38629
28355 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28356 43 0.14609 3.34903 2.78159 3.24776 43 - -
28357 1.38629 1.38629 1.38629 1.38629
28358 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28359 44 3.39708 0.13459 3.44806 2.80270 44 - -
28360 1.38629 1.38629 1.38629 1.38629
28361 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547
28362 45 3.39708 0.13459 3.44806 2.80270 45 - -
28363 1.38629 1.38629 1.38629 1.38629
28364 0.01895 3.97531 * 1.46634 0.26236 0.00000 *
28365 //
28366 HMMER3/b [3.0 | March 2010]
28367 NAME 2_5.8_Metazoa_58S_start_sevenb_long
28368 LENG 45
28369 ALPH DNA
28370 RF no
28371 CS no
28372 MAP yes
28373 DATE Fri Feb 24 23:21:10 2012
28374 NSEQ 3
28375 EFFN 3.000000
28376 CKSUM 1225994552
28377 STATS LOCAL MSV -7.9561 0.72003
28378 STATS LOCAL VITERBI -7.8167 0.72003
28379 STATS LOCAL FORWARD -3.8315 0.72003
28380 HMM A C G T
28381 m->m m->i m->d i->m i->i d->m d->d
28382 COMPO 1.33729 1.40049 1.25326 1.58281
28383 1.38629 1.38629 1.38629 1.38629
28384 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
28385 1 2.97980 2.52563 3.03204 0.19727 1 - -
28386 1.38629 1.38629 1.38629 1.38629
28387 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28388 2 0.15719 3.27118 2.73043 3.16274 2 - -
28389 1.38629 1.38629 1.38629 1.38629
28390 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28391 3 0.15719 3.27118 2.73043 3.16274 3 - -
28392 1.38629 1.38629 1.38629 1.38629
28393 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28394 4 3.30705 0.14631 3.36166 2.73626 4 - -
28395 1.38629 1.38629 1.38629 1.38629
28396 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28397 5 3.30705 0.14631 3.36166 2.73626 5 - -
28398 1.38629 1.38629 1.38629 1.38629
28399 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28400 6 3.30705 0.14631 3.36166 2.73626 6 - -
28401 1.38629 1.38629 1.38629 1.38629
28402 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28403 7 2.97980 2.52563 3.03204 0.19727 7 - -
28404 1.38629 1.38629 1.38629 1.38629
28405 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28406 8 0.15719 3.27118 2.73043 3.16274 8 - -
28407 1.38629 1.38629 1.38629 1.38629
28408 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28409 9 2.86982 3.47591 0.13017 3.36931 9 - -
28410 1.38629 1.38629 1.38629 1.38629
28411 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28412 10 0.15719 3.27118 2.73043 3.16274 10 - -
28413 1.38629 1.38629 1.38629 1.38629
28414 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28415 11 3.30705 0.14631 3.36166 2.73626 11 - -
28416 1.38629 1.38629 1.38629 1.38629
28417 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28418 12 0.15719 3.27118 2.73043 3.16274 12 - -
28419 1.38629 1.38629 1.38629 1.38629
28420 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28421 13 2.86982 3.47591 0.13017 3.36931 13 - -
28422 1.38629 1.38629 1.38629 1.38629
28423 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28424 14 2.86982 3.47591 0.13017 3.36931 14 - -
28425 1.38629 1.38629 1.38629 1.38629
28426 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28427 15 2.86982 3.47591 0.13017 3.36931 15 - -
28428 1.38629 1.38629 1.38629 1.38629
28429 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28430 16 2.86982 3.47591 0.13017 3.36931 16 - -
28431 1.38629 1.38629 1.38629 1.38629
28432 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28433 17 0.15719 3.27118 2.73043 3.16274 17 - -
28434 1.38629 1.38629 1.38629 1.38629
28435 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28436 18 2.97980 2.52563 3.03204 0.19727 18 - -
28437 1.38629 1.38629 1.38629 1.38629
28438 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28439 19 3.30705 0.14631 3.36166 2.73626 19 - -
28440 1.38629 1.38629 1.38629 1.38629
28441 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28442 20 0.15719 3.27118 2.73043 3.16274 20 - -
28443 1.38629 1.38629 1.38629 1.38629
28444 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28445 21 3.30705 0.14631 3.36166 2.73626 21 - -
28446 1.38629 1.38629 1.38629 1.38629
28447 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28448 22 2.97980 2.52563 3.03204 0.19727 22 - -
28449 1.38629 1.38629 1.38629 1.38629
28450 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28451 23 2.97980 2.52563 3.03204 0.19727 23 - -
28452 1.38629 1.38629 1.38629 1.38629
28453 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28454 24 2.86982 3.47591 0.13017 3.36931 24 - -
28455 1.38629 1.38629 1.38629 1.38629
28456 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28457 25 2.86982 3.47591 0.13017 3.36931 25 - -
28458 1.38629 1.38629 1.38629 1.38629
28459 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28460 26 3.30705 0.14631 3.36166 2.73626 26 - -
28461 1.38629 1.38629 1.38629 1.38629
28462 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28463 27 2.97980 2.52563 3.03204 0.19727 27 - -
28464 1.38629 1.38629 1.38629 1.38629
28465 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28466 28 3.30705 0.14631 3.36166 2.73626 28 - -
28467 1.38629 1.38629 1.38629 1.38629
28468 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28469 29 0.15719 3.27118 2.73043 3.16274 29 - -
28470 1.38629 1.38629 1.38629 1.38629
28471 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28472 30 2.97980 2.52563 3.03204 0.19727 30 - -
28473 1.38629 1.38629 1.38629 1.38629
28474 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28475 31 2.86982 3.47591 0.13017 3.36931 31 - -
28476 1.38629 1.38629 1.38629 1.38629
28477 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28478 32 2.86982 3.47591 0.13017 3.36931 32 - -
28479 1.38629 1.38629 1.38629 1.38629
28480 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28481 33 2.86982 3.47591 0.13017 3.36931 33 - -
28482 1.38629 1.38629 1.38629 1.38629
28483 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28484 34 2.97980 2.52563 3.03204 0.19727 34 - -
28485 1.38629 1.38629 1.38629 1.38629
28486 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28487 35 3.30705 0.14631 3.36166 2.73626 35 - -
28488 1.38629 1.38629 1.38629 1.38629
28489 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28490 36 2.86982 3.47591 0.13017 3.36931 36 - -
28491 1.38629 1.38629 1.38629 1.38629
28492 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28493 37 0.15719 3.27118 2.73043 3.16274 37 - -
28494 1.38629 1.38629 1.38629 1.38629
28495 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28496 38 2.97980 2.52563 3.03204 0.19727 38 - -
28497 1.38629 1.38629 1.38629 1.38629
28498 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28499 39 2.86982 3.47591 0.13017 3.36931 39 - -
28500 1.38629 1.38629 1.38629 1.38629
28501 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28502 40 0.15719 3.27118 2.73043 3.16274 40 - -
28503 1.38629 1.38629 1.38629 1.38629
28504 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28505 41 0.15719 3.27118 2.73043 3.16274 41 - -
28506 1.38629 1.38629 1.38629 1.38629
28507 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28508 42 2.86982 3.47591 0.13017 3.36931 42 - -
28509 1.38629 1.38629 1.38629 1.38629
28510 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28511 43 0.15719 3.27118 2.73043 3.16274 43 - -
28512 1.38629 1.38629 1.38629 1.38629
28513 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28514 44 3.30705 0.14631 3.36166 2.73626 44 - -
28515 1.38629 1.38629 1.38629 1.38629
28516 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
28517 45 3.30705 0.14631 3.36166 2.73626 45 - -
28518 1.38629 1.38629 1.38629 1.38629
28519 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
28520 //
28521 HMMER3/b [3.0 | March 2010]
28522 NAME 2_5.8_Metazoa_58S_start_seventeen_long
28523 LENG 45
28524 ALPH DNA
28525 RF no
28526 CS no
28527 MAP yes
28528 DATE Fri Feb 24 23:25:19 2012
28529 NSEQ 37
28530 EFFN 3.130005
28531 CKSUM 2559124236
28532 STATS LOCAL MSV -8.0966 0.71931
28533 STATS LOCAL VITERBI -7.8628 0.71931
28534 STATS LOCAL FORWARD -3.7948 0.71931
28535 HMM A C G T
28536 m->m m->i m->d i->m i->i d->m d->d
28537 COMPO 1.33527 1.34010 1.19529 1.75749
28538 1.38629 1.38629 1.38629 1.38629
28539 0.03825 3.97594 3.97594 1.46634 0.26236 0.00000 *
28540 1 0.15061 3.31655 2.76033 3.21225 1 - -
28541 1.38629 1.38629 1.38629 1.38629
28542 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28543 2 0.15061 3.31655 2.76033 3.21225 2 - -
28544 1.38629 1.38629 1.38629 1.38629
28545 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28546 3 0.15061 3.31655 2.76033 3.21225 3 - -
28547 1.38629 1.38629 1.38629 1.38629
28548 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28549 4 3.35955 0.13934 3.41207 2.77513 4 - -
28550 1.38629 1.38629 1.38629 1.38629
28551 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28552 5 3.35955 0.13934 3.41207 2.77513 5 - -
28553 1.38629 1.38629 1.38629 1.38629
28554 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28555 6 3.35955 0.13934 3.41207 2.77513 6 - -
28556 1.38629 1.38629 1.38629 1.38629
28557 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28558 7 3.02474 2.55443 3.07532 0.18932 7 - -
28559 1.38629 1.38629 1.38629 1.38629
28560 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28561 8 0.15061 3.31655 2.76033 3.21225 8 - -
28562 1.38629 1.38629 1.38629 1.38629
28563 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28564 9 2.90255 3.52270 0.12453 3.42073 9 - -
28565 1.38629 1.38629 1.38629 1.38629
28566 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28567 10 2.90255 3.52270 0.12453 3.42073 10 - -
28568 1.38629 1.38629 1.38629 1.38629
28569 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28570 11 3.35955 0.13934 3.41207 2.77513 11 - -
28571 1.38629 1.38629 1.38629 1.38629
28572 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28573 12 0.15061 3.31655 2.76033 3.21225 12 - -
28574 1.38629 1.38629 1.38629 1.38629
28575 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28576 13 2.90255 3.52270 0.12453 3.42073 13 - -
28577 1.38629 1.38629 1.38629 1.38629
28578 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28579 14 2.90255 3.52270 0.12453 3.42073 14 - -
28580 1.38629 1.38629 1.38629 1.38629
28581 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28582 15 2.90255 3.52270 0.12453 3.42073 15 - -
28583 1.38629 1.38629 1.38629 1.38629
28584 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28585 16 2.90255 3.52270 0.12453 3.42073 16 - -
28586 1.38629 1.38629 1.38629 1.38629
28587 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28588 17 0.15061 3.31655 2.76033 3.21225 17 - -
28589 1.38629 1.38629 1.38629 1.38629
28590 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28591 18 3.02474 2.55443 3.07532 0.18932 18 - -
28592 1.38629 1.38629 1.38629 1.38629
28593 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28594 19 3.35955 0.13934 3.41207 2.77513 19 - -
28595 1.38629 1.38629 1.38629 1.38629
28596 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28597 20 0.15061 3.31655 2.76033 3.21225 20 - -
28598 1.38629 1.38629 1.38629 1.38629
28599 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28600 21 3.35955 0.13934 3.41207 2.77513 21 - -
28601 1.38629 1.38629 1.38629 1.38629
28602 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28603 22 3.02474 2.55443 3.07532 0.18932 22 - -
28604 1.38629 1.38629 1.38629 1.38629
28605 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28606 23 3.35955 0.13934 3.41207 2.77513 23 - -
28607 1.38629 1.38629 1.38629 1.38629
28608 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28609 24 2.90255 3.52270 0.12453 3.42073 24 - -
28610 1.38629 1.38629 1.38629 1.38629
28611 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28612 25 2.90255 3.52270 0.12453 3.42073 25 - -
28613 1.38629 1.38629 1.38629 1.38629
28614 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28615 26 3.35955 0.13934 3.41207 2.77513 26 - -
28616 1.38629 1.38629 1.38629 1.38629
28617 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28618 27 3.02474 2.55443 3.07532 0.18932 27 - -
28619 1.38629 1.38629 1.38629 1.38629
28620 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28621 28 3.35955 0.13934 3.41207 2.77513 28 - -
28622 1.38629 1.38629 1.38629 1.38629
28623 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28624 29 2.90255 3.52270 0.12453 3.42073 29 - -
28625 1.38629 1.38629 1.38629 1.38629
28626 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28627 30 3.02474 2.55443 3.07532 0.18932 30 - -
28628 1.38629 1.38629 1.38629 1.38629
28629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28630 31 2.90255 3.52270 0.12453 3.42073 31 - -
28631 1.38629 1.38629 1.38629 1.38629
28632 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28633 32 2.90255 3.52270 0.12453 3.42073 32 - -
28634 1.38629 1.38629 1.38629 1.38629
28635 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28636 33 0.15061 3.31655 2.76033 3.21225 33 - -
28637 1.38629 1.38629 1.38629 1.38629
28638 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28639 34 3.02474 2.55443 3.07532 0.18932 34 - -
28640 1.38629 1.38629 1.38629 1.38629
28641 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28642 35 3.35955 0.13934 3.41207 2.77513 35 - -
28643 1.38629 1.38629 1.38629 1.38629
28644 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28645 36 2.90255 3.52270 0.12453 3.42073 36 - -
28646 1.38629 1.38629 1.38629 1.38629
28647 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28648 37 0.15061 3.31655 2.76033 3.21225 37 - -
28649 1.38629 1.38629 1.38629 1.38629
28650 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28651 38 3.02474 2.55443 3.07532 0.18932 38 - -
28652 1.38629 1.38629 1.38629 1.38629
28653 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28654 39 2.90255 3.52270 0.12453 3.42073 39 - -
28655 1.38629 1.38629 1.38629 1.38629
28656 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28657 40 0.15061 3.31655 2.76033 3.21225 40 - -
28658 1.38629 1.38629 1.38629 1.38629
28659 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28660 41 0.15061 3.31655 2.76033 3.21225 41 - -
28661 1.38629 1.38629 1.38629 1.38629
28662 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28663 42 2.90255 3.52270 0.12453 3.42073 42 - -
28664 1.38629 1.38629 1.38629 1.38629
28665 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28666 43 0.15061 3.31655 2.76033 3.21225 43 - -
28667 1.38629 1.38629 1.38629 1.38629
28668 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28669 44 3.35955 0.13934 3.41207 2.77513 44 - -
28670 1.38629 1.38629 1.38629 1.38629
28671 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547
28672 45 3.35955 0.13934 3.41207 2.77513 45 - -
28673 1.38629 1.38629 1.38629 1.38629
28674 0.01931 3.95700 * 1.46634 0.26236 0.00000 *
28675 //
28676 HMMER3/b [3.0 | March 2010]
28677 NAME 2_5.8_Metazoa_58S_start_six_long
28678 LENG 45
28679 ALPH DNA
28680 RF no
28681 CS no
28682 MAP yes
28683 DATE Fri Feb 24 23:20:50 2012
28684 NSEQ 14
28685 EFFN 3.318848
28686 CKSUM 2983350357
28687 STATS LOCAL MSV -8.1192 0.71933
28688 STATS LOCAL VITERBI -7.6210 0.71933
28689 STATS LOCAL FORWARD -3.8444 0.71933
28690 HMM A C G T
28691 m->m m->i m->d i->m i->i d->m d->d
28692 COMPO 1.23470 1.39154 1.29524 1.67903
28693 1.38629 1.38629 1.38629 1.38629
28694 0.03691 4.01075 4.01075 1.46634 0.26236 0.00000 *
28695 1 0.14206 3.37903 2.80113 3.28058 1 - -
28696 1.38629 1.38629 1.38629 1.38629
28697 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28698 2 3.43169 0.13038 3.48121 2.82797 2 - -
28699 1.38629 1.38629 1.38629 1.38629
28700 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28701 3 0.14206 3.37903 2.80113 3.28058 3 - -
28702 1.38629 1.38629 1.38629 1.38629
28703 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28704 4 2.76265 1.89290 2.82268 0.31911 4 - -
28705 1.38629 1.38629 1.38629 1.38629
28706 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28707 5 3.43169 0.13038 3.48121 2.82797 5 - -
28708 1.38629 1.38629 1.38629 1.38629
28709 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28710 6 3.43169 0.13038 3.48121 2.82797 6 - -
28711 1.38629 1.38629 1.38629 1.38629
28712 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28713 7 3.08737 2.59435 3.13557 0.17888 7 - -
28714 1.38629 1.38629 1.38629 1.38629
28715 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28716 8 0.14206 3.37903 2.80113 3.28058 8 - -
28717 1.38629 1.38629 1.38629 1.38629
28718 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28719 9 2.94667 3.58651 0.11730 3.49105 9 - -
28720 1.38629 1.38629 1.38629 1.38629
28721 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28722 10 0.14206 3.37903 2.80113 3.28058 10 - -
28723 1.38629 1.38629 1.38629 1.38629
28724 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28725 11 3.43169 0.13038 3.48121 2.82797 11 - -
28726 1.38629 1.38629 1.38629 1.38629
28727 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28728 12 0.14206 3.37903 2.80113 3.28058 12 - -
28729 1.38629 1.38629 1.38629 1.38629
28730 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28731 13 2.94667 3.58651 0.11730 3.49105 13 - -
28732 1.38629 1.38629 1.38629 1.38629
28733 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28734 14 2.94667 3.58651 0.11730 3.49105 14 - -
28735 1.38629 1.38629 1.38629 1.38629
28736 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28737 15 2.94667 3.58651 0.11730 3.49105 15 - -
28738 1.38629 1.38629 1.38629 1.38629
28739 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28740 16 2.94667 3.58651 0.11730 3.49105 16 - -
28741 1.38629 1.38629 1.38629 1.38629
28742 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28743 17 0.14206 3.37903 2.80113 3.28058 17 - -
28744 1.38629 1.38629 1.38629 1.38629
28745 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28746 18 3.08737 2.59435 3.13557 0.17888 18 - -
28747 1.38629 1.38629 1.38629 1.38629
28748 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28749 19 3.43169 0.13038 3.48121 2.82797 19 - -
28750 1.38629 1.38629 1.38629 1.38629
28751 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28752 20 0.14206 3.37903 2.80113 3.28058 20 - -
28753 1.38629 1.38629 1.38629 1.38629
28754 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28755 21 3.43169 0.13038 3.48121 2.82797 21 - -
28756 1.38629 1.38629 1.38629 1.38629
28757 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28758 22 3.08737 2.59435 3.13557 0.17888 22 - -
28759 1.38629 1.38629 1.38629 1.38629
28760 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28761 23 0.14206 3.37903 2.80113 3.28058 23 - -
28762 1.38629 1.38629 1.38629 1.38629
28763 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28764 24 2.94667 3.58651 0.11730 3.49105 24 - -
28765 1.38629 1.38629 1.38629 1.38629
28766 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28767 25 2.94667 3.58651 0.11730 3.49105 25 - -
28768 1.38629 1.38629 1.38629 1.38629
28769 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28770 26 3.43169 0.13038 3.48121 2.82797 26 - -
28771 1.38629 1.38629 1.38629 1.38629
28772 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28773 27 3.08737 2.59435 3.13557 0.17888 27 - -
28774 1.38629 1.38629 1.38629 1.38629
28775 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28776 28 3.43169 0.13038 3.48121 2.82797 28 - -
28777 1.38629 1.38629 1.38629 1.38629
28778 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28779 29 0.14206 3.37903 2.80113 3.28058 29 - -
28780 1.38629 1.38629 1.38629 1.38629
28781 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28782 30 3.08737 2.59435 3.13557 0.17888 30 - -
28783 1.38629 1.38629 1.38629 1.38629
28784 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28785 31 2.94667 3.58651 0.11730 3.49105 31 - -
28786 1.38629 1.38629 1.38629 1.38629
28787 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28788 32 2.94667 3.58651 0.11730 3.49105 32 - -
28789 1.38629 1.38629 1.38629 1.38629
28790 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28791 33 0.55410 2.60362 1.32347 2.46278 33 - -
28792 1.38629 1.38629 1.38629 1.38629
28793 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28794 34 3.08737 2.59435 3.13557 0.17888 34 - -
28795 1.38629 1.38629 1.38629 1.38629
28796 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28797 35 3.43169 0.13038 3.48121 2.82797 35 - -
28798 1.38629 1.38629 1.38629 1.38629
28799 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28800 36 2.94667 3.58651 0.11730 3.49105 36 - -
28801 1.38629 1.38629 1.38629 1.38629
28802 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28803 37 0.14206 3.37903 2.80113 3.28058 37 - -
28804 1.38629 1.38629 1.38629 1.38629
28805 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28806 38 3.08737 2.59435 3.13557 0.17888 38 - -
28807 1.38629 1.38629 1.38629 1.38629
28808 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28809 39 2.94667 3.58651 0.11730 3.49105 39 - -
28810 1.38629 1.38629 1.38629 1.38629
28811 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28812 40 0.14206 3.37903 2.80113 3.28058 40 - -
28813 1.38629 1.38629 1.38629 1.38629
28814 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28815 41 0.14206 3.37903 2.80113 3.28058 41 - -
28816 1.38629 1.38629 1.38629 1.38629
28817 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28818 42 2.94667 3.58651 0.11730 3.49105 42 - -
28819 1.38629 1.38629 1.38629 1.38629
28820 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28821 43 0.14206 3.37903 2.80113 3.28058 43 - -
28822 1.38629 1.38629 1.38629 1.38629
28823 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28824 44 3.43169 0.13038 3.48121 2.82797 44 - -
28825 1.38629 1.38629 1.38629 1.38629
28826 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547
28827 45 3.43169 0.13038 3.48121 2.82797 45 - -
28828 1.38629 1.38629 1.38629 1.38629
28829 0.01863 3.99247 * 1.46634 0.26236 0.00000 *
28830 //
28831 HMMER3/b [3.0 | March 2010]
28832 NAME 2_5.8_Metazoa_58S_start_sixteen_long
28833 LENG 45
28834 ALPH DNA
28835 RF no
28836 CS no
28837 MAP yes
28838 DATE Fri Feb 24 23:25:09 2012
28839 NSEQ 11
28840 EFFN 3.279053
28841 CKSUM 3971834909
28842 STATS LOCAL MSV -8.0429 0.71932
28843 STATS LOCAL VITERBI -7.6961 0.71932
28844 STATS LOCAL FORWARD -4.2466 0.71932
28845 HMM A C G T
28846 m->m m->i m->d i->m i->i d->m d->d
28847 COMPO 1.44601 1.30717 1.19132 1.66028
28848 1.38629 1.38629 1.38629 1.38629
28849 0.03719 4.00352 4.00352 1.46634 0.26236 0.00000 *
28850 1 1.03707 0.94572 2.13766 1.97200 1 - -
28851 1.38629 1.38629 1.38629 1.38629
28852 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28853 2 0.14377 3.36619 2.79278 3.26653 2 - -
28854 1.38629 1.38629 1.38629 1.38629
28855 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28856 3 0.14377 3.36619 2.79278 3.26653 3 - -
28857 1.38629 1.38629 1.38629 1.38629
28858 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28859 4 3.41689 0.13216 3.46703 2.81717 4 - -
28860 1.38629 1.38629 1.38629 1.38629
28861 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28862 5 3.41689 0.13216 3.46703 2.81717 5 - -
28863 1.38629 1.38629 1.38629 1.38629
28864 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28865 6 3.41689 0.13216 3.46703 2.81717 6 - -
28866 1.38629 1.38629 1.38629 1.38629
28867 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28868 7 3.41689 0.13216 3.46703 2.81717 7 - -
28869 1.38629 1.38629 1.38629 1.38629
28870 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28871 8 2.93769 3.57346 0.11874 3.47665 8 - -
28872 1.38629 1.38629 1.38629 1.38629
28873 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28874 9 0.14377 3.36619 2.79278 3.26653 9 - -
28875 1.38629 1.38629 1.38629 1.38629
28876 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28877 10 0.14377 3.36619 2.79278 3.26653 10 - -
28878 1.38629 1.38629 1.38629 1.38629
28879 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28880 11 3.41689 0.13216 3.46703 2.81717 11 - -
28881 1.38629 1.38629 1.38629 1.38629
28882 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28883 12 2.93769 3.57346 0.11874 3.47665 12 - -
28884 1.38629 1.38629 1.38629 1.38629
28885 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28886 13 2.93769 3.57346 0.11874 3.47665 13 - -
28887 1.38629 1.38629 1.38629 1.38629
28888 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28889 14 3.07443 2.58612 3.12312 0.18098 14 - -
28890 1.38629 1.38629 1.38629 1.38629
28891 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28892 15 2.93769 3.57346 0.11874 3.47665 15 - -
28893 1.38629 1.38629 1.38629 1.38629
28894 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28895 16 2.93769 3.57346 0.11874 3.47665 16 - -
28896 1.38629 1.38629 1.38629 1.38629
28897 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28898 17 0.14377 3.36619 2.79278 3.26653 17 - -
28899 1.38629 1.38629 1.38629 1.38629
28900 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28901 18 3.07443 2.58612 3.12312 0.18098 18 - -
28902 1.38629 1.38629 1.38629 1.38629
28903 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28904 19 3.41689 0.13216 3.46703 2.81717 19 - -
28905 1.38629 1.38629 1.38629 1.38629
28906 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28907 20 0.14377 3.36619 2.79278 3.26653 20 - -
28908 1.38629 1.38629 1.38629 1.38629
28909 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28910 21 3.41689 0.13216 3.46703 2.81717 21 - -
28911 1.38629 1.38629 1.38629 1.38629
28912 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28913 22 3.07443 2.58612 3.12312 0.18098 22 - -
28914 1.38629 1.38629 1.38629 1.38629
28915 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28916 23 3.07443 2.58612 3.12312 0.18098 23 - -
28917 1.38629 1.38629 1.38629 1.38629
28918 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28919 24 2.93769 3.57346 0.11874 3.47665 24 - -
28920 1.38629 1.38629 1.38629 1.38629
28921 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28922 25 2.93769 3.57346 0.11874 3.47665 25 - -
28923 1.38629 1.38629 1.38629 1.38629
28924 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28925 26 3.41689 0.13216 3.46703 2.81717 26 - -
28926 1.38629 1.38629 1.38629 1.38629
28927 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28928 27 3.07443 2.58612 3.12312 0.18098 27 - -
28929 1.38629 1.38629 1.38629 1.38629
28930 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28931 28 3.41689 0.13216 3.46703 2.81717 28 - -
28932 1.38629 1.38629 1.38629 1.38629
28933 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28934 29 2.93769 3.57346 0.11874 3.47665 29 - -
28935 1.38629 1.38629 1.38629 1.38629
28936 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28937 30 3.07443 2.58612 3.12312 0.18098 30 - -
28938 1.38629 1.38629 1.38629 1.38629
28939 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28940 31 2.93769 3.57346 0.11874 3.47665 31 - -
28941 1.38629 1.38629 1.38629 1.38629
28942 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28943 32 2.93769 3.57346 0.11874 3.47665 32 - -
28944 1.38629 1.38629 1.38629 1.38629
28945 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28946 33 2.93769 3.57346 0.11874 3.47665 33 - -
28947 1.38629 1.38629 1.38629 1.38629
28948 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28949 34 3.07443 2.58612 3.12312 0.18098 34 - -
28950 1.38629 1.38629 1.38629 1.38629
28951 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28952 35 3.41689 0.13216 3.46703 2.81717 35 - -
28953 1.38629 1.38629 1.38629 1.38629
28954 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28955 36 2.93769 3.57346 0.11874 3.47665 36 - -
28956 1.38629 1.38629 1.38629 1.38629
28957 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28958 37 0.14377 3.36619 2.79278 3.26653 37 - -
28959 1.38629 1.38629 1.38629 1.38629
28960 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28961 38 3.07443 2.58612 3.12312 0.18098 38 - -
28962 1.38629 1.38629 1.38629 1.38629
28963 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28964 39 2.93769 3.57346 0.11874 3.47665 39 - -
28965 1.38629 1.38629 1.38629 1.38629
28966 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28967 40 0.14377 3.36619 2.79278 3.26653 40 - -
28968 1.38629 1.38629 1.38629 1.38629
28969 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28970 41 0.14377 3.36619 2.79278 3.26653 41 - -
28971 1.38629 1.38629 1.38629 1.38629
28972 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28973 42 2.93769 3.57346 0.11874 3.47665 42 - -
28974 1.38629 1.38629 1.38629 1.38629
28975 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28976 43 0.14377 3.36619 2.79278 3.26653 43 - -
28977 1.38629 1.38629 1.38629 1.38629
28978 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28979 44 3.41689 0.13216 3.46703 2.81717 44 - -
28980 1.38629 1.38629 1.38629 1.38629
28981 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
28982 45 3.41689 0.13216 3.46703 2.81717 45 - -
28983 1.38629 1.38629 1.38629 1.38629
28984 0.01877 3.98510 * 1.46634 0.26236 0.00000 *
28985 //
28986 HMMER3/b [3.0 | March 2010]
28987 NAME 2_5.8_Metazoa_58S_start_ten_long
28988 LENG 45
28989 ALPH DNA
28990 RF no
28991 CS no
28992 MAP yes
28993 DATE Fri Feb 24 23:22:10 2012
28994 NSEQ 7
28995 EFFN 3.209473
28996 CKSUM 4051946853
28997 STATS LOCAL MSV -8.1094 0.71932
28998 STATS LOCAL VITERBI -7.7031 0.71932
28999 STATS LOCAL FORWARD -4.2976 0.71932
29000 HMM A C G T
29001 m->m m->i m->d i->m i->i d->m d->d
29002 COMPO 1.47474 1.39097 1.25491 1.43874
29003 1.38629 1.38629 1.38629 1.38629
29004 0.03767 3.99074 3.99074 1.46634 0.26236 0.00000 *
29005 1 3.39050 0.13541 3.44174 2.79787 1 - -
29006 1.38629 1.38629 1.38629 1.38629
29007 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29008 2 3.05148 2.57149 3.10104 0.18478 2 - -
29009 1.38629 1.38629 1.38629 1.38629
29010 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29011 3 0.14687 3.34333 2.77786 3.24152 3 - -
29012 1.38629 1.38629 1.38629 1.38629
29013 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29014 4 3.05148 2.57149 3.10104 0.18478 4 - -
29015 1.38629 1.38629 1.38629 1.38629
29016 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29017 5 3.39050 0.13541 3.44174 2.79787 5 - -
29018 1.38629 1.38629 1.38629 1.38629
29019 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29020 6 3.39050 0.13541 3.44174 2.79787 6 - -
29021 1.38629 1.38629 1.38629 1.38629
29022 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29023 7 3.05148 2.57149 3.10104 0.18478 7 - -
29024 1.38629 1.38629 1.38629 1.38629
29025 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29026 8 0.14687 3.34333 2.77786 3.24152 8 - -
29027 1.38629 1.38629 1.38629 1.38629
29028 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29029 9 3.05148 2.57149 3.10104 0.18478 9 - -
29030 1.38629 1.38629 1.38629 1.38629
29031 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29032 10 2.92158 3.55014 0.12136 3.45094 10 - -
29033 1.38629 1.38629 1.38629 1.38629
29034 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29035 11 3.39050 0.13541 3.44174 2.79787 11 - -
29036 1.38629 1.38629 1.38629 1.38629
29037 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29038 12 2.92158 3.55014 0.12136 3.45094 12 - -
29039 1.38629 1.38629 1.38629 1.38629
29040 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29041 13 2.92158 3.55014 0.12136 3.45094 13 - -
29042 1.38629 1.38629 1.38629 1.38629
29043 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29044 14 3.05148 2.57149 3.10104 0.18478 14 - -
29045 1.38629 1.38629 1.38629 1.38629
29046 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29047 15 2.92158 3.55014 0.12136 3.45094 15 - -
29048 1.38629 1.38629 1.38629 1.38629
29049 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29050 16 2.92158 3.55014 0.12136 3.45094 16 - -
29051 1.38629 1.38629 1.38629 1.38629
29052 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29053 17 0.14687 3.34333 2.77786 3.24152 17 - -
29054 1.38629 1.38629 1.38629 1.38629
29055 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29056 18 3.05148 2.57149 3.10104 0.18478 18 - -
29057 1.38629 1.38629 1.38629 1.38629
29058 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29059 19 3.39050 0.13541 3.44174 2.79787 19 - -
29060 1.38629 1.38629 1.38629 1.38629
29061 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29062 20 0.14687 3.34333 2.77786 3.24152 20 - -
29063 1.38629 1.38629 1.38629 1.38629
29064 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29065 21 3.39050 0.13541 3.44174 2.79787 21 - -
29066 1.38629 1.38629 1.38629 1.38629
29067 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29068 22 3.05148 2.57149 3.10104 0.18478 22 - -
29069 1.38629 1.38629 1.38629 1.38629
29070 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29071 23 3.39050 0.13541 3.44174 2.79787 23 - -
29072 1.38629 1.38629 1.38629 1.38629
29073 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29074 24 2.92158 3.55014 0.12136 3.45094 24 - -
29075 1.38629 1.38629 1.38629 1.38629
29076 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29077 25 2.92158 3.55014 0.12136 3.45094 25 - -
29078 1.38629 1.38629 1.38629 1.38629
29079 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29080 26 3.39050 0.13541 3.44174 2.79787 26 - -
29081 1.38629 1.38629 1.38629 1.38629
29082 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29083 27 3.05148 2.57149 3.10104 0.18478 27 - -
29084 1.38629 1.38629 1.38629 1.38629
29085 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29086 28 3.39050 0.13541 3.44174 2.79787 28 - -
29087 1.38629 1.38629 1.38629 1.38629
29088 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29089 29 2.92158 3.55014 0.12136 3.45094 29 - -
29090 1.38629 1.38629 1.38629 1.38629
29091 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29092 30 3.05148 2.57149 3.10104 0.18478 30 - -
29093 1.38629 1.38629 1.38629 1.38629
29094 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29095 31 2.92158 3.55014 0.12136 3.45094 31 - -
29096 1.38629 1.38629 1.38629 1.38629
29097 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29098 32 2.92158 3.55014 0.12136 3.45094 32 - -
29099 1.38629 1.38629 1.38629 1.38629
29100 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29101 33 0.14687 3.34333 2.77786 3.24152 33 - -
29102 1.38629 1.38629 1.38629 1.38629
29103 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29104 34 3.05148 2.57149 3.10104 0.18478 34 - -
29105 1.38629 1.38629 1.38629 1.38629
29106 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29107 35 3.39050 0.13541 3.44174 2.79787 35 - -
29108 1.38629 1.38629 1.38629 1.38629
29109 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29110 36 2.92158 3.55014 0.12136 3.45094 36 - -
29111 1.38629 1.38629 1.38629 1.38629
29112 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29113 37 0.14687 3.34333 2.77786 3.24152 37 - -
29114 1.38629 1.38629 1.38629 1.38629
29115 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29116 38 3.05148 2.57149 3.10104 0.18478 38 - -
29117 1.38629 1.38629 1.38629 1.38629
29118 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29119 39 2.92158 3.55014 0.12136 3.45094 39 - -
29120 1.38629 1.38629 1.38629 1.38629
29121 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29122 40 0.14687 3.34333 2.77786 3.24152 40 - -
29123 1.38629 1.38629 1.38629 1.38629
29124 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29125 41 0.14687 3.34333 2.77786 3.24152 41 - -
29126 1.38629 1.38629 1.38629 1.38629
29127 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29128 42 2.92158 3.55014 0.12136 3.45094 42 - -
29129 1.38629 1.38629 1.38629 1.38629
29130 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29131 43 0.14687 3.34333 2.77786 3.24152 43 - -
29132 1.38629 1.38629 1.38629 1.38629
29133 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29134 44 0.14687 3.34333 2.77786 3.24152 44 - -
29135 1.38629 1.38629 1.38629 1.38629
29136 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547
29137 45 3.39050 0.13541 3.44174 2.79787 45 - -
29138 1.38629 1.38629 1.38629 1.38629
29139 0.01901 3.97208 * 1.46634 0.26236 0.00000 *
29140 //
29141 HMMER3/b [3.0 | March 2010]
29142 NAME 2_5.8_Metazoa_58S_start_thirteen_long
29143 LENG 45
29144 ALPH DNA
29145 RF no
29146 CS no
29147 MAP yes
29148 DATE Fri Feb 24 23:22:45 2012
29149 NSEQ 4
29150 EFFN 3.152344
29151 CKSUM 810384303
29152 STATS LOCAL MSV -8.0298 0.71932
29153 STATS LOCAL VITERBI -7.7615 0.71932
29154 STATS LOCAL FORWARD -4.0731 0.71932
29155 HMM A C G T
29156 m->m m->i m->d i->m i->i d->m d->d
29157 COMPO 1.47142 1.39865 1.14135 1.58922
29158 1.38629 1.38629 1.38629 1.38629
29159 0.03808 3.98012 3.98012 1.46634 0.26236 0.00000 *
29160 1 3.36834 0.13821 3.42049 2.78160 1 - -
29161 1.38629 1.38629 1.38629 1.38629
29162 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29163 2 0.14954 3.32415 2.76532 3.22056 2 - -
29164 1.38629 1.38629 1.38629 1.38629
29165 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29166 3 0.14954 3.32415 2.76532 3.22056 3 - -
29167 1.38629 1.38629 1.38629 1.38629
29168 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29169 4 3.36834 0.13821 3.42049 2.78160 4 - -
29170 1.38629 1.38629 1.38629 1.38629
29171 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29172 5 3.36834 0.13821 3.42049 2.78160 5 - -
29173 1.38629 1.38629 1.38629 1.38629
29174 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29175 6 3.03232 2.55926 3.08260 0.18802 6 - -
29176 1.38629 1.38629 1.38629 1.38629
29177 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29178 7 3.36834 0.13821 3.42049 2.78160 7 - -
29179 1.38629 1.38629 1.38629 1.38629
29180 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29181 8 2.90797 3.53050 0.12362 3.42932 8 - -
29182 1.38629 1.38629 1.38629 1.38629
29183 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29184 9 0.14954 3.32415 2.76532 3.22056 9 - -
29185 1.38629 1.38629 1.38629 1.38629
29186 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29187 10 2.90797 3.53050 0.12362 3.42932 10 - -
29188 1.38629 1.38629 1.38629 1.38629
29189 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29190 11 3.03232 2.55926 3.08260 0.18802 11 - -
29191 1.38629 1.38629 1.38629 1.38629
29192 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29193 12 2.90797 3.53050 0.12362 3.42932 12 - -
29194 1.38629 1.38629 1.38629 1.38629
29195 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29196 13 2.90797 3.53050 0.12362 3.42932 13 - -
29197 1.38629 1.38629 1.38629 1.38629
29198 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29199 14 3.03232 2.55926 3.08260 0.18802 14 - -
29200 1.38629 1.38629 1.38629 1.38629
29201 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29202 15 2.90797 3.53050 0.12362 3.42932 15 - -
29203 1.38629 1.38629 1.38629 1.38629
29204 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29205 16 2.90797 3.53050 0.12362 3.42932 16 - -
29206 1.38629 1.38629 1.38629 1.38629
29207 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29208 17 0.14954 3.32415 2.76532 3.22056 17 - -
29209 1.38629 1.38629 1.38629 1.38629
29210 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29211 18 3.03232 2.55926 3.08260 0.18802 18 - -
29212 1.38629 1.38629 1.38629 1.38629
29213 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29214 19 3.36834 0.13821 3.42049 2.78160 19 - -
29215 1.38629 1.38629 1.38629 1.38629
29216 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29217 20 0.14954 3.32415 2.76532 3.22056 20 - -
29218 1.38629 1.38629 1.38629 1.38629
29219 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29220 21 3.36834 0.13821 3.42049 2.78160 21 - -
29221 1.38629 1.38629 1.38629 1.38629
29222 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29223 22 3.03232 2.55926 3.08260 0.18802 22 - -
29224 1.38629 1.38629 1.38629 1.38629
29225 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29226 23 3.36834 0.13821 3.42049 2.78160 23 - -
29227 1.38629 1.38629 1.38629 1.38629
29228 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29229 24 2.90797 3.53050 0.12362 3.42932 24 - -
29230 1.38629 1.38629 1.38629 1.38629
29231 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29232 25 2.90797 3.53050 0.12362 3.42932 25 - -
29233 1.38629 1.38629 1.38629 1.38629
29234 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29235 26 3.36834 0.13821 3.42049 2.78160 26 - -
29236 1.38629 1.38629 1.38629 1.38629
29237 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29238 27 3.03232 2.55926 3.08260 0.18802 27 - -
29239 1.38629 1.38629 1.38629 1.38629
29240 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29241 28 3.36834 0.13821 3.42049 2.78160 28 - -
29242 1.38629 1.38629 1.38629 1.38629
29243 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29244 29 2.90797 3.53050 0.12362 3.42932 29 - -
29245 1.38629 1.38629 1.38629 1.38629
29246 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29247 30 3.03232 2.55926 3.08260 0.18802 30 - -
29248 1.38629 1.38629 1.38629 1.38629
29249 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29250 31 2.90797 3.53050 0.12362 3.42932 31 - -
29251 1.38629 1.38629 1.38629 1.38629
29252 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29253 32 2.90797 3.53050 0.12362 3.42932 32 - -
29254 1.38629 1.38629 1.38629 1.38629
29255 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29256 33 2.90797 3.53050 0.12362 3.42932 33 - -
29257 1.38629 1.38629 1.38629 1.38629
29258 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29259 34 3.03232 2.55926 3.08260 0.18802 34 - -
29260 1.38629 1.38629 1.38629 1.38629
29261 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29262 35 3.36834 0.13821 3.42049 2.78160 35 - -
29263 1.38629 1.38629 1.38629 1.38629
29264 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29265 36 2.90797 3.53050 0.12362 3.42932 36 - -
29266 1.38629 1.38629 1.38629 1.38629
29267 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29268 37 0.14954 3.32415 2.76532 3.22056 37 - -
29269 1.38629 1.38629 1.38629 1.38629
29270 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29271 38 3.03232 2.55926 3.08260 0.18802 38 - -
29272 1.38629 1.38629 1.38629 1.38629
29273 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29274 39 2.90797 3.53050 0.12362 3.42932 39 - -
29275 1.38629 1.38629 1.38629 1.38629
29276 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29277 40 0.14954 3.32415 2.76532 3.22056 40 - -
29278 1.38629 1.38629 1.38629 1.38629
29279 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29280 41 0.14954 3.32415 2.76532 3.22056 41 - -
29281 1.38629 1.38629 1.38629 1.38629
29282 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29283 42 2.90797 3.53050 0.12362 3.42932 42 - -
29284 1.38629 1.38629 1.38629 1.38629
29285 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29286 43 0.14954 3.32415 2.76532 3.22056 43 - -
29287 1.38629 1.38629 1.38629 1.38629
29288 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29289 44 0.14954 3.32415 2.76532 3.22056 44 - -
29290 1.38629 1.38629 1.38629 1.38629
29291 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
29292 45 3.36834 0.13821 3.42049 2.78160 45 - -
29293 1.38629 1.38629 1.38629 1.38629
29294 0.01922 3.96126 * 1.46634 0.26236 0.00000 *
29295 //
29296 HMMER3/b [3.0 | March 2010]
29297 NAME 2_5.8_Metazoa_58S_start_thirty_long
29298 LENG 45
29299 ALPH DNA
29300 RF no
29301 CS no
29302 MAP yes
29303 DATE Fri Feb 24 23:28:30 2012
29304 NSEQ 7
29305 EFFN 3.264160
29306 CKSUM 812206563
29307 STATS LOCAL MSV -8.0813 0.71932
29308 STATS LOCAL VITERBI -7.6510 0.71932
29309 STATS LOCAL FORWARD -3.9317 0.71932
29310 HMM A C G T
29311 m->m m->i m->d i->m i->i d->m d->d
29312 COMPO 1.46033 1.26627 1.27290 1.58016
29313 1.38629 1.38629 1.38629 1.38629
29314 0.03729 4.00080 4.00080 1.46634 0.26236 0.00000 *
29315 1 0.14442 3.36134 2.78962 3.26122 1 - -
29316 1.38629 1.38629 1.38629 1.38629
29317 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29318 2 2.93428 3.56852 0.11929 3.47120 2 - -
29319 1.38629 1.38629 1.38629 1.38629
29320 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29321 3 0.14442 3.36134 2.78962 3.26122 3 - -
29322 1.38629 1.38629 1.38629 1.38629
29323 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29324 4 3.41129 0.13284 3.46167 2.81309 4 - -
29325 1.38629 1.38629 1.38629 1.38629
29326 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29327 5 3.06955 2.58301 3.11843 0.18178 5 - -
29328 1.38629 1.38629 1.38629 1.38629
29329 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29330 6 3.41129 0.13284 3.46167 2.81309 6 - -
29331 1.38629 1.38629 1.38629 1.38629
29332 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29333 7 3.06955 2.58301 3.11843 0.18178 7 - -
29334 1.38629 1.38629 1.38629 1.38629
29335 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29336 8 2.93428 3.56852 0.11929 3.47120 8 - -
29337 1.38629 1.38629 1.38629 1.38629
29338 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29339 9 3.41129 0.13284 3.46167 2.81309 9 - -
29340 1.38629 1.38629 1.38629 1.38629
29341 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29342 10 0.14442 3.36134 2.78962 3.26122 10 - -
29343 1.38629 1.38629 1.38629 1.38629
29344 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29345 11 3.41129 0.13284 3.46167 2.81309 11 - -
29346 1.38629 1.38629 1.38629 1.38629
29347 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29348 12 2.93428 3.56852 0.11929 3.47120 12 - -
29349 1.38629 1.38629 1.38629 1.38629
29350 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29351 13 2.93428 3.56852 0.11929 3.47120 13 - -
29352 1.38629 1.38629 1.38629 1.38629
29353 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29354 14 3.06955 2.58301 3.11843 0.18178 14 - -
29355 1.38629 1.38629 1.38629 1.38629
29356 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29357 15 2.93428 3.56852 0.11929 3.47120 15 - -
29358 1.38629 1.38629 1.38629 1.38629
29359 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29360 16 1.52120 2.73041 0.44409 2.59090 16 - -
29361 1.38629 1.38629 1.38629 1.38629
29362 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29363 17 0.14442 3.36134 2.78962 3.26122 17 - -
29364 1.38629 1.38629 1.38629 1.38629
29365 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29366 18 3.06955 2.58301 3.11843 0.18178 18 - -
29367 1.38629 1.38629 1.38629 1.38629
29368 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29369 19 3.41129 0.13284 3.46167 2.81309 19 - -
29370 1.38629 1.38629 1.38629 1.38629
29371 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29372 20 3.06955 2.58301 3.11843 0.18178 20 - -
29373 1.38629 1.38629 1.38629 1.38629
29374 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29375 21 3.41129 0.13284 3.46167 2.81309 21 - -
29376 1.38629 1.38629 1.38629 1.38629
29377 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29378 22 3.06955 2.58301 3.11843 0.18178 22 - -
29379 1.38629 1.38629 1.38629 1.38629
29380 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29381 23 3.41129 0.13284 3.46167 2.81309 23 - -
29382 1.38629 1.38629 1.38629 1.38629
29383 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29384 24 2.93428 3.56852 0.11929 3.47120 24 - -
29385 1.38629 1.38629 1.38629 1.38629
29386 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29387 25 2.93428 3.56852 0.11929 3.47120 25 - -
29388 1.38629 1.38629 1.38629 1.38629
29389 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29390 26 3.41129 0.13284 3.46167 2.81309 26 - -
29391 1.38629 1.38629 1.38629 1.38629
29392 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29393 27 3.06955 2.58301 3.11843 0.18178 27 - -
29394 1.38629 1.38629 1.38629 1.38629
29395 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29396 28 3.41129 0.13284 3.46167 2.81309 28 - -
29397 1.38629 1.38629 1.38629 1.38629
29398 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29399 29 2.93428 3.56852 0.11929 3.47120 29 - -
29400 1.38629 1.38629 1.38629 1.38629
29401 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29402 30 3.41129 0.13284 3.46167 2.81309 30 - -
29403 1.38629 1.38629 1.38629 1.38629
29404 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29405 31 2.93428 3.56852 0.11929 3.47120 31 - -
29406 1.38629 1.38629 1.38629 1.38629
29407 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29408 32 3.41129 0.13284 3.46167 2.81309 32 - -
29409 1.38629 1.38629 1.38629 1.38629
29410 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29411 33 0.14442 3.36134 2.78962 3.26122 33 - -
29412 1.38629 1.38629 1.38629 1.38629
29413 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29414 34 3.06955 2.58301 3.11843 0.18178 34 - -
29415 1.38629 1.38629 1.38629 1.38629
29416 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29417 35 3.41129 0.13284 3.46167 2.81309 35 - -
29418 1.38629 1.38629 1.38629 1.38629
29419 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29420 36 2.93428 3.56852 0.11929 3.47120 36 - -
29421 1.38629 1.38629 1.38629 1.38629
29422 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29423 37 0.14442 3.36134 2.78962 3.26122 37 - -
29424 1.38629 1.38629 1.38629 1.38629
29425 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29426 38 3.06955 2.58301 3.11843 0.18178 38 - -
29427 1.38629 1.38629 1.38629 1.38629
29428 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29429 39 2.93428 3.56852 0.11929 3.47120 39 - -
29430 1.38629 1.38629 1.38629 1.38629
29431 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29432 40 0.14442 3.36134 2.78962 3.26122 40 - -
29433 1.38629 1.38629 1.38629 1.38629
29434 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29435 41 0.14442 3.36134 2.78962 3.26122 41 - -
29436 1.38629 1.38629 1.38629 1.38629
29437 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29438 42 2.93428 3.56852 0.11929 3.47120 42 - -
29439 1.38629 1.38629 1.38629 1.38629
29440 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29441 43 0.14442 3.36134 2.78962 3.26122 43 - -
29442 1.38629 1.38629 1.38629 1.38629
29443 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29444 44 0.14442 3.36134 2.78962 3.26122 44 - -
29445 1.38629 1.38629 1.38629 1.38629
29446 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
29447 45 3.41129 0.13284 3.46167 2.81309 45 - -
29448 1.38629 1.38629 1.38629 1.38629
29449 0.01882 3.98232 * 1.46634 0.26236 0.00000 *
29450 //
29451 HMMER3/b [3.0 | March 2010]
29452 NAME 2_5.8_Metazoa_58S_start_thirtyonea_long
29453 LENG 45
29454 ALPH DNA
29455 RF no
29456 CS no
29457 MAP yes
29458 DATE Fri Feb 24 23:28:37 2012
29459 NSEQ 2
29460 EFFN 2.000000
29461 CKSUM 1046995822
29462 STATS LOCAL MSV -7.5868 0.72754
29463 STATS LOCAL VITERBI -8.1846 0.72754
29464 STATS LOCAL FORWARD -3.1677 0.72754
29465 HMM A C G T
29466 m->m m->i m->d i->m i->i d->m d->d
29467 COMPO 1.59609 1.19386 1.27094 1.54321
29468 1.38629 1.38629 1.38629 1.38629
29469 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
29470 1 2.57915 2.25909 2.64442 0.28946 1 - -
29471 1.38629 1.38629 1.38629 1.38629
29472 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29473 2 2.81865 0.23582 2.88868 2.35662 2 - -
29474 1.38629 1.38629 1.38629 1.38629
29475 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29476 3 2.53331 3.02441 0.20344 2.88069 3 - -
29477 1.38629 1.38629 1.38629 1.38629
29478 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29479 4 2.81865 0.23582 2.88868 2.35662 4 - -
29480 1.38629 1.38629 1.38629 1.38629
29481 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29482 5 2.57915 2.25909 2.64442 0.28946 5 - -
29483 1.38629 1.38629 1.38629 1.38629
29484 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29485 6 2.81865 0.23582 2.88868 2.35662 6 - -
29486 1.38629 1.38629 1.38629 1.38629
29487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29488 7 2.57915 2.25909 2.64442 0.28946 7 - -
29489 1.38629 1.38629 1.38629 1.38629
29490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29491 8 2.53331 3.02441 0.20344 2.88069 8 - -
29492 1.38629 1.38629 1.38629 1.38629
29493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29494 9 2.81865 0.23582 2.88868 2.35662 9 - -
29495 1.38629 1.38629 1.38629 1.38629
29496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29497 10 0.23862 2.84929 2.43386 2.70756 10 - -
29498 1.38629 1.38629 1.38629 1.38629
29499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29500 11 2.81865 0.23582 2.88868 2.35662 11 - -
29501 1.38629 1.38629 1.38629 1.38629
29502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29503 12 2.53331 3.02441 0.20344 2.88069 12 - -
29504 1.38629 1.38629 1.38629 1.38629
29505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29506 13 2.53331 3.02441 0.20344 2.88069 13 - -
29507 1.38629 1.38629 1.38629 1.38629
29508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29509 14 2.81865 0.23582 2.88868 2.35662 14 - -
29510 1.38629 1.38629 1.38629 1.38629
29511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29512 15 2.53331 3.02441 0.20344 2.88069 15 - -
29513 1.38629 1.38629 1.38629 1.38629
29514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29515 16 2.53331 3.02441 0.20344 2.88069 16 - -
29516 1.38629 1.38629 1.38629 1.38629
29517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29518 17 0.23862 2.84929 2.43386 2.70756 17 - -
29519 1.38629 1.38629 1.38629 1.38629
29520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29521 18 2.57915 2.25909 2.64442 0.28946 18 - -
29522 1.38629 1.38629 1.38629 1.38629
29523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29524 19 2.81865 0.23582 2.88868 2.35662 19 - -
29525 1.38629 1.38629 1.38629 1.38629
29526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29527 20 2.57915 2.25909 2.64442 0.28946 20 - -
29528 1.38629 1.38629 1.38629 1.38629
29529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29530 21 2.81865 0.23582 2.88868 2.35662 21 - -
29531 1.38629 1.38629 1.38629 1.38629
29532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29533 22 2.57915 2.25909 2.64442 0.28946 22 - -
29534 1.38629 1.38629 1.38629 1.38629
29535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29536 23 2.81865 0.23582 2.88868 2.35662 23 - -
29537 1.38629 1.38629 1.38629 1.38629
29538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29539 24 2.53331 3.02441 0.20344 2.88069 24 - -
29540 1.38629 1.38629 1.38629 1.38629
29541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29542 25 2.53331 3.02441 0.20344 2.88069 25 - -
29543 1.38629 1.38629 1.38629 1.38629
29544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29545 26 2.81865 0.23582 2.88868 2.35662 26 - -
29546 1.38629 1.38629 1.38629 1.38629
29547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29548 27 2.57915 2.25909 2.64442 0.28946 27 - -
29549 1.38629 1.38629 1.38629 1.38629
29550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29551 28 2.81865 0.23582 2.88868 2.35662 28 - -
29552 1.38629 1.38629 1.38629 1.38629
29553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29554 29 2.53331 3.02441 0.20344 2.88069 29 - -
29555 1.38629 1.38629 1.38629 1.38629
29556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29557 30 2.81865 0.23582 2.88868 2.35662 30 - -
29558 1.38629 1.38629 1.38629 1.38629
29559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29560 31 2.53331 3.02441 0.20344 2.88069 31 - -
29561 1.38629 1.38629 1.38629 1.38629
29562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29563 32 2.81865 0.23582 2.88868 2.35662 32 - -
29564 1.38629 1.38629 1.38629 1.38629
29565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29566 33 0.23862 2.84929 2.43386 2.70756 33 - -
29567 1.38629 1.38629 1.38629 1.38629
29568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29569 34 2.57915 2.25909 2.64442 0.28946 34 - -
29570 1.38629 1.38629 1.38629 1.38629
29571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29572 35 2.81865 0.23582 2.88868 2.35662 35 - -
29573 1.38629 1.38629 1.38629 1.38629
29574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29575 36 2.53331 3.02441 0.20344 2.88069 36 - -
29576 1.38629 1.38629 1.38629 1.38629
29577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29578 37 0.23862 2.84929 2.43386 2.70756 37 - -
29579 1.38629 1.38629 1.38629 1.38629
29580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29581 38 2.57915 2.25909 2.64442 0.28946 38 - -
29582 1.38629 1.38629 1.38629 1.38629
29583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29584 39 2.53331 3.02441 0.20344 2.88069 39 - -
29585 1.38629 1.38629 1.38629 1.38629
29586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29587 40 0.23862 2.84929 2.43386 2.70756 40 - -
29588 1.38629 1.38629 1.38629 1.38629
29589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29590 41 0.23862 2.84929 2.43386 2.70756 41 - -
29591 1.38629 1.38629 1.38629 1.38629
29592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29593 42 2.53331 3.02441 0.20344 2.88069 42 - -
29594 1.38629 1.38629 1.38629 1.38629
29595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29596 43 0.23862 2.84929 2.43386 2.70756 43 - -
29597 1.38629 1.38629 1.38629 1.38629
29598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29599 44 0.23862 2.84929 2.43386 2.70756 44 - -
29600 1.38629 1.38629 1.38629 1.38629
29601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29602 45 2.81865 0.23582 2.88868 2.35662 45 - -
29603 1.38629 1.38629 1.38629 1.38629
29604 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
29605 //
29606 HMMER3/b [3.0 | March 2010]
29607 NAME 2_5.8_Metazoa_58S_start_thirtyoneb_long
29608 LENG 45
29609 ALPH DNA
29610 RF no
29611 CS no
29612 MAP yes
29613 DATE Fri Feb 24 23:28:43 2012
29614 NSEQ 5
29615 EFFN 3.129883
29616 CKSUM 4096650600
29617 STATS LOCAL MSV -8.1750 0.71933
29618 STATS LOCAL VITERBI -7.7706 0.71933
29619 STATS LOCAL FORWARD -3.7607 0.71933
29620 HMM A C G T
29621 m->m m->i m->d i->m i->i d->m d->d
29622 COMPO 1.63938 1.10429 1.26146 1.65438
29623 1.38629 1.38629 1.38629 1.38629
29624 0.03825 3.97591 3.97591 1.46634 0.26236 0.00000 *
29625 1 3.02470 2.55440 3.07528 0.18933 1 - -
29626 1.38629 1.38629 1.38629 1.38629
29627 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29628 2 3.35951 0.13934 3.41202 2.77509 2 - -
29629 1.38629 1.38629 1.38629 1.38629
29630 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29631 3 2.90252 3.52266 0.12454 3.42069 3 - -
29632 1.38629 1.38629 1.38629 1.38629
29633 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29634 4 3.35951 0.13934 3.41202 2.77509 4 - -
29635 1.38629 1.38629 1.38629 1.38629
29636 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29637 5 3.02470 2.55440 3.07528 0.18933 5 - -
29638 1.38629 1.38629 1.38629 1.38629
29639 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29640 6 3.35951 0.13934 3.41202 2.77509 6 - -
29641 1.38629 1.38629 1.38629 1.38629
29642 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29643 7 3.35951 0.13934 3.41202 2.77509 7 - -
29644 1.38629 1.38629 1.38629 1.38629
29645 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29646 8 2.90252 3.52266 0.12454 3.42069 8 - -
29647 1.38629 1.38629 1.38629 1.38629
29648 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29649 9 3.35951 0.13934 3.41202 2.77509 9 - -
29650 1.38629 1.38629 1.38629 1.38629
29651 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29652 10 0.15061 3.31651 2.76031 3.21221 10 - -
29653 1.38629 1.38629 1.38629 1.38629
29654 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29655 11 3.35951 0.13934 3.41202 2.77509 11 - -
29656 1.38629 1.38629 1.38629 1.38629
29657 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29658 12 2.90252 3.52266 0.12454 3.42069 12 - -
29659 1.38629 1.38629 1.38629 1.38629
29660 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29661 13 2.90252 3.52266 0.12454 3.42069 13 - -
29662 1.38629 1.38629 1.38629 1.38629
29663 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29664 14 3.02470 2.55440 3.07528 0.18933 14 - -
29665 1.38629 1.38629 1.38629 1.38629
29666 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29667 15 2.90252 3.52266 0.12454 3.42069 15 - -
29668 1.38629 1.38629 1.38629 1.38629
29669 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29670 16 2.90252 3.52266 0.12454 3.42069 16 - -
29671 1.38629 1.38629 1.38629 1.38629
29672 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29673 17 0.15061 3.31651 2.76031 3.21221 17 - -
29674 1.38629 1.38629 1.38629 1.38629
29675 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29676 18 3.02470 2.55440 3.07528 0.18933 18 - -
29677 1.38629 1.38629 1.38629 1.38629
29678 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29679 19 3.35951 0.13934 3.41202 2.77509 19 - -
29680 1.38629 1.38629 1.38629 1.38629
29681 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29682 20 3.02470 2.55440 3.07528 0.18933 20 - -
29683 1.38629 1.38629 1.38629 1.38629
29684 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29685 21 3.35951 0.13934 3.41202 2.77509 21 - -
29686 1.38629 1.38629 1.38629 1.38629
29687 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29688 22 3.02470 2.55440 3.07528 0.18933 22 - -
29689 1.38629 1.38629 1.38629 1.38629
29690 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29691 23 3.35951 0.13934 3.41202 2.77509 23 - -
29692 1.38629 1.38629 1.38629 1.38629
29693 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29694 24 2.90252 3.52266 0.12454 3.42069 24 - -
29695 1.38629 1.38629 1.38629 1.38629
29696 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29697 25 2.90252 3.52266 0.12454 3.42069 25 - -
29698 1.38629 1.38629 1.38629 1.38629
29699 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29700 26 3.35951 0.13934 3.41202 2.77509 26 - -
29701 1.38629 1.38629 1.38629 1.38629
29702 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29703 27 3.02470 2.55440 3.07528 0.18933 27 - -
29704 1.38629 1.38629 1.38629 1.38629
29705 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29706 28 3.35951 0.13934 3.41202 2.77509 28 - -
29707 1.38629 1.38629 1.38629 1.38629
29708 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29709 29 2.90252 3.52266 0.12454 3.42069 29 - -
29710 1.38629 1.38629 1.38629 1.38629
29711 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29712 30 3.35951 0.13934 3.41202 2.77509 30 - -
29713 1.38629 1.38629 1.38629 1.38629
29714 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29715 31 2.90252 3.52266 0.12454 3.42069 31 - -
29716 1.38629 1.38629 1.38629 1.38629
29717 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29718 32 3.35951 0.13934 3.41202 2.77509 32 - -
29719 1.38629 1.38629 1.38629 1.38629
29720 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29721 33 0.15061 3.31651 2.76031 3.21221 33 - -
29722 1.38629 1.38629 1.38629 1.38629
29723 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29724 34 3.02470 2.55440 3.07528 0.18933 34 - -
29725 1.38629 1.38629 1.38629 1.38629
29726 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29727 35 3.35951 0.13934 3.41202 2.77509 35 - -
29728 1.38629 1.38629 1.38629 1.38629
29729 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29730 36 2.90252 3.52266 0.12454 3.42069 36 - -
29731 1.38629 1.38629 1.38629 1.38629
29732 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29733 37 0.15061 3.31651 2.76031 3.21221 37 - -
29734 1.38629 1.38629 1.38629 1.38629
29735 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29736 38 3.35951 0.13934 3.41202 2.77509 38 - -
29737 1.38629 1.38629 1.38629 1.38629
29738 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29739 39 2.90252 3.52266 0.12454 3.42069 39 - -
29740 1.38629 1.38629 1.38629 1.38629
29741 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29742 40 0.15061 3.31651 2.76031 3.21221 40 - -
29743 1.38629 1.38629 1.38629 1.38629
29744 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29745 41 0.15061 3.31651 2.76031 3.21221 41 - -
29746 1.38629 1.38629 1.38629 1.38629
29747 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29748 42 2.90252 3.52266 0.12454 3.42069 42 - -
29749 1.38629 1.38629 1.38629 1.38629
29750 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29751 43 0.15061 3.31651 2.76031 3.21221 43 - -
29752 1.38629 1.38629 1.38629 1.38629
29753 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29754 44 0.15061 3.31651 2.76031 3.21221 44 - -
29755 1.38629 1.38629 1.38629 1.38629
29756 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547
29757 45 3.35951 0.13934 3.41202 2.77509 45 - -
29758 1.38629 1.38629 1.38629 1.38629
29759 0.01931 3.95697 * 1.46634 0.26236 0.00000 *
29760 //
29761 HMMER3/b [3.0 | March 2010]
29762 NAME 2_5.8_Metazoa_58S_start_thirtythree_long
29763 LENG 45
29764 ALPH DNA
29765 RF no
29766 CS no
29767 MAP yes
29768 DATE Fri Feb 24 23:29:03 2012
29769 NSEQ 48
29770 EFFN 3.647461
29771 CKSUM 4032312740
29772 STATS LOCAL MSV -7.4786 0.71932
29773 STATS LOCAL VITERBI -7.7717 0.71932
29774 STATS LOCAL FORWARD -3.9630 0.71932
29775 HMM A C G T
29776 m->m m->i m->d i->m i->i d->m d->d
29777 COMPO 1.04914 1.61632 1.50702 1.47158
29778 1.38629 1.38629 1.38629 1.38629
29779 0.03480 4.06859 4.06859 1.46634 0.26236 0.00000 *
29780 1 0.12954 3.47883 2.86559 3.38999 1 - -
29781 1.38629 1.38629 1.38629 1.38629
29782 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29783 2 2.41031 3.38048 0.17632 3.27461 2 - -
29784 1.38629 1.38629 1.38629 1.38629
29785 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29786 3 0.12954 3.47883 2.86559 3.38999 3 - -
29787 1.38629 1.38629 1.38629 1.38629
29788 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29789 4 3.54628 0.11749 3.59080 2.91069 4 - -
29790 1.38629 1.38629 1.38629 1.38629
29791 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29792 5 3.18923 2.65900 3.23350 0.16327 5 - -
29793 1.38629 1.38629 1.38629 1.38629
29794 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29795 6 3.54628 0.11749 3.59080 2.91069 6 - -
29796 1.38629 1.38629 1.38629 1.38629
29797 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29798 7 0.12954 3.47883 2.86559 3.38999 7 - -
29799 1.38629 1.38629 1.38629 1.38629
29800 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29801 8 0.12954 3.47883 2.86559 3.38999 8 - -
29802 1.38629 1.38629 1.38629 1.38629
29803 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29804 9 3.18923 2.65900 3.23350 0.16327 9 - -
29805 1.38629 1.38629 1.38629 1.38629
29806 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29807 10 0.16654 3.33925 2.54021 3.24169 10 - -
29808 1.38629 1.38629 1.38629 1.38629
29809 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29810 11 3.18923 2.65900 3.23350 0.16327 11 - -
29811 1.38629 1.38629 1.38629 1.38629
29812 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29813 12 3.01510 3.68679 0.10688 3.60196 12 - -
29814 1.38629 1.38629 1.38629 1.38629
29815 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29816 13 3.01510 3.68679 0.10688 3.60196 13 - -
29817 1.38629 1.38629 1.38629 1.38629
29818 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29819 14 2.02112 3.12880 0.25580 3.00727 14 - -
29820 1.38629 1.38629 1.38629 1.38629
29821 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29822 15 3.01510 3.68679 0.10688 3.60196 15 - -
29823 1.38629 1.38629 1.38629 1.38629
29824 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29825 16 3.01510 3.68679 0.10688 3.60196 16 - -
29826 1.38629 1.38629 1.38629 1.38629
29827 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29828 17 0.12954 3.47883 2.86559 3.38999 17 - -
29829 1.38629 1.38629 1.38629 1.38629
29830 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29831 18 3.18923 2.65900 3.23350 0.16327 18 - -
29832 1.38629 1.38629 1.38629 1.38629
29833 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29834 19 3.54628 0.11749 3.59080 2.91069 19 - -
29835 1.38629 1.38629 1.38629 1.38629
29836 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29837 20 0.12954 3.47883 2.86559 3.38999 20 - -
29838 1.38629 1.38629 1.38629 1.38629
29839 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29840 21 3.54628 0.11749 3.59080 2.91069 21 - -
29841 1.38629 1.38629 1.38629 1.38629
29842 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29843 22 3.18923 2.65900 3.23350 0.16327 22 - -
29844 1.38629 1.38629 1.38629 1.38629
29845 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29846 23 3.18923 2.65900 3.23350 0.16327 23 - -
29847 1.38629 1.38629 1.38629 1.38629
29848 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29849 24 0.12954 3.47883 2.86559 3.38999 24 - -
29850 1.38629 1.38629 1.38629 1.38629
29851 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29852 25 3.01510 3.68679 0.10688 3.60196 25 - -
29853 1.38629 1.38629 1.38629 1.38629
29854 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29855 26 3.18923 2.65900 3.23350 0.16327 26 - -
29856 1.38629 1.38629 1.38629 1.38629
29857 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29858 27 3.54628 0.11749 3.59080 2.91069 27 - -
29859 1.38629 1.38629 1.38629 1.38629
29860 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29861 28 3.54628 0.11749 3.59080 2.91069 28 - -
29862 1.38629 1.38629 1.38629 1.38629
29863 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29864 29 3.05688 2.33574 3.10645 0.20891 29 - -
29865 1.38629 1.38629 1.38629 1.38629
29866 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29867 30 3.18923 2.65900 3.23350 0.16327 30 - -
29868 1.38629 1.38629 1.38629 1.38629
29869 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29870 31 0.23754 3.03409 2.32699 2.72222 31 - -
29871 1.38629 1.38629 1.38629 1.38629
29872 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29873 32 0.21364 3.18940 2.25141 3.08099 32 - -
29874 1.38629 1.38629 1.38629 1.38629
29875 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29876 33 0.12954 3.47883 2.86559 3.38999 33 - -
29877 1.38629 1.38629 1.38629 1.38629
29878 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29879 34 2.02083 2.14463 1.31013 0.73281 34 - -
29880 1.38629 1.38629 1.38629 1.38629
29881 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29882 35 3.54628 0.11749 3.59080 2.91069 35 - -
29883 1.38629 1.38629 1.38629 1.38629
29884 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29885 36 3.01510 3.68679 0.10688 3.60196 36 - -
29886 1.38629 1.38629 1.38629 1.38629
29887 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29888 37 0.12954 3.47883 2.86559 3.38999 37 - -
29889 1.38629 1.38629 1.38629 1.38629
29890 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29891 38 3.18923 2.65900 3.23350 0.16327 38 - -
29892 1.38629 1.38629 1.38629 1.38629
29893 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29894 39 3.01510 3.68679 0.10688 3.60196 39 - -
29895 1.38629 1.38629 1.38629 1.38629
29896 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29897 40 0.12954 3.47883 2.86559 3.38999 40 - -
29898 1.38629 1.38629 1.38629 1.38629
29899 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29900 41 0.12954 3.47883 2.86559 3.38999 41 - -
29901 1.38629 1.38629 1.38629 1.38629
29902 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29903 42 0.12954 3.47883 2.86559 3.38999 42 - -
29904 1.38629 1.38629 1.38629 1.38629
29905 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29906 43 0.12954 3.47883 2.86559 3.38999 43 - -
29907 1.38629 1.38629 1.38629 1.38629
29908 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29909 44 0.12954 3.47883 2.86559 3.38999 44 - -
29910 1.38629 1.38629 1.38629 1.38629
29911 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547
29912 45 3.54628 0.11749 3.59080 2.91069 45 - -
29913 1.38629 1.38629 1.38629 1.38629
29914 0.01755 4.05134 * 1.46634 0.26236 0.00000 *
29915 //
29916 HMMER3/b [3.0 | March 2010]
29917 NAME 2_5.8_Metazoa_58S_start_thirtytwo_long
29918 LENG 45
29919 ALPH DNA
29920 RF no
29921 CS no
29922 MAP yes
29923 DATE Fri Feb 24 23:28:55 2012
29924 NSEQ 3
29925 EFFN 3.000000
29926 CKSUM 879315818
29927 STATS LOCAL MSV -8.1527 0.71989
29928 STATS LOCAL VITERBI -7.7905 0.71989
29929 STATS LOCAL FORWARD -3.8287 0.71989
29930 HMM A C G T
29931 m->m m->i m->d i->m i->i d->m d->d
29932 COMPO 1.63033 1.27343 1.14436 1.58067
29933 1.38629 1.38629 1.38629 1.38629
29934 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
29935 1 2.86982 3.47591 0.13017 3.36931 1 - -
29936 1.38629 1.38629 1.38629 1.38629
29937 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29938 2 2.97980 2.52563 3.03204 0.19727 2 - -
29939 1.38629 1.38629 1.38629 1.38629
29940 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29941 3 2.86982 3.47591 0.13017 3.36931 3 - -
29942 1.38629 1.38629 1.38629 1.38629
29943 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29944 4 3.30705 0.14631 3.36166 2.73626 4 - -
29945 1.38629 1.38629 1.38629 1.38629
29946 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29947 5 2.97980 2.52563 3.03204 0.19727 5 - -
29948 1.38629 1.38629 1.38629 1.38629
29949 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29950 6 3.30705 0.14631 3.36166 2.73626 6 - -
29951 1.38629 1.38629 1.38629 1.38629
29952 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29953 7 3.30705 0.14631 3.36166 2.73626 7 - -
29954 1.38629 1.38629 1.38629 1.38629
29955 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29956 8 2.86982 3.47591 0.13017 3.36931 8 - -
29957 1.38629 1.38629 1.38629 1.38629
29958 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29959 9 3.30705 0.14631 3.36166 2.73626 9 - -
29960 1.38629 1.38629 1.38629 1.38629
29961 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29962 10 0.15719 3.27118 2.73043 3.16274 10 - -
29963 1.38629 1.38629 1.38629 1.38629
29964 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29965 11 3.30705 0.14631 3.36166 2.73626 11 - -
29966 1.38629 1.38629 1.38629 1.38629
29967 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29968 12 2.86982 3.47591 0.13017 3.36931 12 - -
29969 1.38629 1.38629 1.38629 1.38629
29970 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29971 13 2.86982 3.47591 0.13017 3.36931 13 - -
29972 1.38629 1.38629 1.38629 1.38629
29973 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29974 14 2.97980 2.52563 3.03204 0.19727 14 - -
29975 1.38629 1.38629 1.38629 1.38629
29976 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29977 15 2.86982 3.47591 0.13017 3.36931 15 - -
29978 1.38629 1.38629 1.38629 1.38629
29979 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29980 16 2.86982 3.47591 0.13017 3.36931 16 - -
29981 1.38629 1.38629 1.38629 1.38629
29982 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29983 17 0.15719 3.27118 2.73043 3.16274 17 - -
29984 1.38629 1.38629 1.38629 1.38629
29985 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29986 18 2.97980 2.52563 3.03204 0.19727 18 - -
29987 1.38629 1.38629 1.38629 1.38629
29988 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29989 19 3.30705 0.14631 3.36166 2.73626 19 - -
29990 1.38629 1.38629 1.38629 1.38629
29991 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29992 20 2.97980 2.52563 3.03204 0.19727 20 - -
29993 1.38629 1.38629 1.38629 1.38629
29994 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29995 21 3.30705 0.14631 3.36166 2.73626 21 - -
29996 1.38629 1.38629 1.38629 1.38629
29997 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
29998 22 2.97980 2.52563 3.03204 0.19727 22 - -
29999 1.38629 1.38629 1.38629 1.38629
30000 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30001 23 2.86982 3.47591 0.13017 3.36931 23 - -
30002 1.38629 1.38629 1.38629 1.38629
30003 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30004 24 2.86982 3.47591 0.13017 3.36931 24 - -
30005 1.38629 1.38629 1.38629 1.38629
30006 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30007 25 2.86982 3.47591 0.13017 3.36931 25 - -
30008 1.38629 1.38629 1.38629 1.38629
30009 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30010 26 3.30705 0.14631 3.36166 2.73626 26 - -
30011 1.38629 1.38629 1.38629 1.38629
30012 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30013 27 2.97980 2.52563 3.03204 0.19727 27 - -
30014 1.38629 1.38629 1.38629 1.38629
30015 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30016 28 3.30705 0.14631 3.36166 2.73626 28 - -
30017 1.38629 1.38629 1.38629 1.38629
30018 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30019 29 2.86982 3.47591 0.13017 3.36931 29 - -
30020 1.38629 1.38629 1.38629 1.38629
30021 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30022 30 3.30705 0.14631 3.36166 2.73626 30 - -
30023 1.38629 1.38629 1.38629 1.38629
30024 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30025 31 2.86982 3.47591 0.13017 3.36931 31 - -
30026 1.38629 1.38629 1.38629 1.38629
30027 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30028 32 3.30705 0.14631 3.36166 2.73626 32 - -
30029 1.38629 1.38629 1.38629 1.38629
30030 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30031 33 0.15719 3.27118 2.73043 3.16274 33 - -
30032 1.38629 1.38629 1.38629 1.38629
30033 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30034 34 2.97980 2.52563 3.03204 0.19727 34 - -
30035 1.38629 1.38629 1.38629 1.38629
30036 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30037 35 3.30705 0.14631 3.36166 2.73626 35 - -
30038 1.38629 1.38629 1.38629 1.38629
30039 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30040 36 2.86982 3.47591 0.13017 3.36931 36 - -
30041 1.38629 1.38629 1.38629 1.38629
30042 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30043 37 0.15719 3.27118 2.73043 3.16274 37 - -
30044 1.38629 1.38629 1.38629 1.38629
30045 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30046 38 2.97980 2.52563 3.03204 0.19727 38 - -
30047 1.38629 1.38629 1.38629 1.38629
30048 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30049 39 2.86982 3.47591 0.13017 3.36931 39 - -
30050 1.38629 1.38629 1.38629 1.38629
30051 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30052 40 0.15719 3.27118 2.73043 3.16274 40 - -
30053 1.38629 1.38629 1.38629 1.38629
30054 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30055 41 0.15719 3.27118 2.73043 3.16274 41 - -
30056 1.38629 1.38629 1.38629 1.38629
30057 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30058 42 2.86982 3.47591 0.13017 3.36931 42 - -
30059 1.38629 1.38629 1.38629 1.38629
30060 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30061 43 0.15719 3.27118 2.73043 3.16274 43 - -
30062 1.38629 1.38629 1.38629 1.38629
30063 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30064 44 0.15719 3.27118 2.73043 3.16274 44 - -
30065 1.38629 1.38629 1.38629 1.38629
30066 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30067 45 3.30705 0.14631 3.36166 2.73626 45 - -
30068 1.38629 1.38629 1.38629 1.38629
30069 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
30070 //
30071 HMMER3/b [3.0 | March 2010]
30072 NAME 2_5.8_Metazoa_58S_start_threea_long
30073 LENG 45
30074 ALPH DNA
30075 RF no
30076 CS no
30077 MAP yes
30078 DATE Fri Feb 24 23:14:04 2012
30079 NSEQ 9
30080 EFFN 3.440918
30081 CKSUM 1294574687
30082 STATS LOCAL MSV -7.3109 0.71933
30083 STATS LOCAL VITERBI -7.6663 0.71933
30084 STATS LOCAL FORWARD -4.3716 0.71933
30085 HMM A C G T
30086 m->m m->i m->d i->m i->i d->m d->d
30087 COMPO 1.46775 1.47309 1.24708 1.37438
30088 1.38629 1.38629 1.38629 1.38629
30089 0.03610 4.03263 4.03263 1.46634 0.26236 0.00000 *
30090 1 3.47583 0.12523 3.52346 2.85999 1 - -
30091 1.38629 1.38629 1.38629 1.38629
30092 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30093 2 3.12623 2.61905 3.17294 0.17273 2 - -
30094 1.38629 1.38629 1.38629 1.38629
30095 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30096 3 0.13709 3.41738 2.82598 3.32258 3 - -
30097 1.38629 1.38629 1.38629 1.38629
30098 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30099 4 2.97325 3.62528 0.11314 3.53388 4 - -
30100 1.38629 1.38629 1.38629 1.38629
30101 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30102 5 2.52215 1.34100 2.59044 0.53933 5 - -
30103 1.38629 1.38629 1.38629 1.38629
30104 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30105 6 2.51499 0.60153 2.58667 1.21776 6 - -
30106 1.38629 1.38629 1.38629 1.38629
30107 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30108 7 3.12623 2.61905 3.17294 0.17273 7 - -
30109 1.38629 1.38629 1.38629 1.38629
30110 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30111 8 3.12623 2.61905 3.17294 0.17273 8 - -
30112 1.38629 1.38629 1.38629 1.38629
30113 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30114 9 0.13709 3.41738 2.82598 3.32258 9 - -
30115 1.38629 1.38629 1.38629 1.38629
30116 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30117 10 3.12623 2.61905 3.17294 0.17273 10 - -
30118 1.38629 1.38629 1.38629 1.38629
30119 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30120 11 3.47583 0.12523 3.52346 2.85999 11 - -
30121 1.38629 1.38629 1.38629 1.38629
30122 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30123 12 2.97325 3.62528 0.11314 3.53388 12 - -
30124 1.38629 1.38629 1.38629 1.38629
30125 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30126 13 2.97325 3.62528 0.11314 3.53388 13 - -
30127 1.38629 1.38629 1.38629 1.38629
30128 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30129 14 3.12623 2.61905 3.17294 0.17273 14 - -
30130 1.38629 1.38629 1.38629 1.38629
30131 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30132 15 2.97325 3.62528 0.11314 3.53388 15 - -
30133 1.38629 1.38629 1.38629 1.38629
30134 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30135 16 2.97325 3.62528 0.11314 3.53388 16 - -
30136 1.38629 1.38629 1.38629 1.38629
30137 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30138 17 0.13709 3.41738 2.82598 3.32258 17 - -
30139 1.38629 1.38629 1.38629 1.38629
30140 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30141 18 3.12623 2.61905 3.17294 0.17273 18 - -
30142 1.38629 1.38629 1.38629 1.38629
30143 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30144 19 3.47583 0.12523 3.52346 2.85999 19 - -
30145 1.38629 1.38629 1.38629 1.38629
30146 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30147 20 0.13709 3.41738 2.82598 3.32258 20 - -
30148 1.38629 1.38629 1.38629 1.38629
30149 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30150 21 3.47583 0.12523 3.52346 2.85999 21 - -
30151 1.38629 1.38629 1.38629 1.38629
30152 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30153 22 3.12623 2.61905 3.17294 0.17273 22 - -
30154 1.38629 1.38629 1.38629 1.38629
30155 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30156 23 3.47583 0.12523 3.52346 2.85999 23 - -
30157 1.38629 1.38629 1.38629 1.38629
30158 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30159 24 2.97325 3.62528 0.11314 3.53388 24 - -
30160 1.38629 1.38629 1.38629 1.38629
30161 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30162 25 2.97325 3.62528 0.11314 3.53388 25 - -
30163 1.38629 1.38629 1.38629 1.38629
30164 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30165 26 3.47583 0.12523 3.52346 2.85999 26 - -
30166 1.38629 1.38629 1.38629 1.38629
30167 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30168 27 3.12623 2.61905 3.17294 0.17273 27 - -
30169 1.38629 1.38629 1.38629 1.38629
30170 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30171 28 3.47583 0.12523 3.52346 2.85999 28 - -
30172 1.38629 1.38629 1.38629 1.38629
30173 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30174 29 2.97325 3.62528 0.11314 3.53388 29 - -
30175 1.38629 1.38629 1.38629 1.38629
30176 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30177 30 3.12623 2.61905 3.17294 0.17273 30 - -
30178 1.38629 1.38629 1.38629 1.38629
30179 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30180 31 0.13709 3.41738 2.82598 3.32258 31 - -
30181 1.38629 1.38629 1.38629 1.38629
30182 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30183 32 2.97325 3.62528 0.11314 3.53388 32 - -
30184 1.38629 1.38629 1.38629 1.38629
30185 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30186 33 2.97325 3.62528 0.11314 3.53388 33 - -
30187 1.38629 1.38629 1.38629 1.38629
30188 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30189 34 3.12623 2.61905 3.17294 0.17273 34 - -
30190 1.38629 1.38629 1.38629 1.38629
30191 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30192 35 3.47583 0.12523 3.52346 2.85999 35 - -
30193 1.38629 1.38629 1.38629 1.38629
30194 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30195 36 2.97325 3.62528 0.11314 3.53388 36 - -
30196 1.38629 1.38629 1.38629 1.38629
30197 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30198 37 0.13709 3.41738 2.82598 3.32258 37 - -
30199 1.38629 1.38629 1.38629 1.38629
30200 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30201 38 3.12623 2.61905 3.17294 0.17273 38 - -
30202 1.38629 1.38629 1.38629 1.38629
30203 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30204 39 2.97325 3.62528 0.11314 3.53388 39 - -
30205 1.38629 1.38629 1.38629 1.38629
30206 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30207 40 0.13709 3.41738 2.82598 3.32258 40 - -
30208 1.38629 1.38629 1.38629 1.38629
30209 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30210 41 0.13709 3.41738 2.82598 3.32258 41 - -
30211 1.38629 1.38629 1.38629 1.38629
30212 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30213 42 2.97325 3.62528 0.11314 3.53388 42 - -
30214 1.38629 1.38629 1.38629 1.38629
30215 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30216 43 0.13709 3.41738 2.82598 3.32258 43 - -
30217 1.38629 1.38629 1.38629 1.38629
30218 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30219 44 0.13709 3.41738 2.82598 3.32258 44 - -
30220 1.38629 1.38629 1.38629 1.38629
30221 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
30222 45 3.47583 0.12523 3.52346 2.85999 45 - -
30223 1.38629 1.38629 1.38629 1.38629
30224 0.01821 4.01475 * 1.46634 0.26236 0.00000 *
30225 //
30226 HMMER3/b [3.0 | March 2010]
30227 NAME 2_5.8_Metazoa_58S_start_threeb_long
30228 LENG 45
30229 ALPH DNA
30230 RF no
30231 CS no
30232 MAP yes
30233 DATE Fri Feb 24 23:14:09 2012
30234 NSEQ 11
30235 EFFN 3.305908
30236 CKSUM 1468312356
30237 STATS LOCAL MSV -8.0909 0.71933
30238 STATS LOCAL VITERBI -7.7497 0.71933
30239 STATS LOCAL FORWARD -4.1867 0.71933
30240 HMM A C G T
30241 m->m m->i m->d i->m i->i d->m d->d
30242 COMPO 1.47160 1.44665 1.25108 1.39075
30243 1.38629 1.38629 1.38629 1.38629
30244 0.03700 4.00841 4.00841 1.46634 0.26236 0.00000 *
30245 1 3.42690 0.13095 3.47662 2.82448 1 - -
30246 1.38629 1.38629 1.38629 1.38629
30247 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30248 2 3.08318 2.59169 3.13154 0.17955 2 - -
30249 1.38629 1.38629 1.38629 1.38629
30250 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30251 3 0.14261 3.37488 2.79843 3.27603 3 - -
30252 1.38629 1.38629 1.38629 1.38629
30253 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30254 4 2.94377 3.58229 0.11776 3.48639 4 - -
30255 1.38629 1.38629 1.38629 1.38629
30256 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30257 5 2.56468 1.50508 2.63123 0.46352 5 - -
30258 1.38629 1.38629 1.38629 1.38629
30259 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30260 6 3.42690 0.13095 3.47662 2.82448 6 - -
30261 1.38629 1.38629 1.38629 1.38629
30262 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30263 7 3.08318 2.59169 3.13154 0.17955 7 - -
30264 1.38629 1.38629 1.38629 1.38629
30265 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30266 8 3.08318 2.59169 3.13154 0.17955 8 - -
30267 1.38629 1.38629 1.38629 1.38629
30268 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30269 9 0.14261 3.37488 2.79843 3.27603 9 - -
30270 1.38629 1.38629 1.38629 1.38629
30271 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30272 10 3.08318 2.59169 3.13154 0.17955 10 - -
30273 1.38629 1.38629 1.38629 1.38629
30274 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30275 11 3.42690 0.13095 3.47662 2.82448 11 - -
30276 1.38629 1.38629 1.38629 1.38629
30277 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30278 12 2.94377 3.58229 0.11776 3.48639 12 - -
30279 1.38629 1.38629 1.38629 1.38629
30280 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30281 13 2.94377 3.58229 0.11776 3.48639 13 - -
30282 1.38629 1.38629 1.38629 1.38629
30283 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30284 14 3.08318 2.59169 3.13154 0.17955 14 - -
30285 1.38629 1.38629 1.38629 1.38629
30286 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30287 15 2.94377 3.58229 0.11776 3.48639 15 - -
30288 1.38629 1.38629 1.38629 1.38629
30289 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30290 16 2.94377 3.58229 0.11776 3.48639 16 - -
30291 1.38629 1.38629 1.38629 1.38629
30292 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30293 17 0.14261 3.37488 2.79843 3.27603 17 - -
30294 1.38629 1.38629 1.38629 1.38629
30295 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30296 18 3.08318 2.59169 3.13154 0.17955 18 - -
30297 1.38629 1.38629 1.38629 1.38629
30298 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30299 19 3.42690 0.13095 3.47662 2.82448 19 - -
30300 1.38629 1.38629 1.38629 1.38629
30301 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30302 20 0.14261 3.37488 2.79843 3.27603 20 - -
30303 1.38629 1.38629 1.38629 1.38629
30304 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30305 21 3.42690 0.13095 3.47662 2.82448 21 - -
30306 1.38629 1.38629 1.38629 1.38629
30307 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30308 22 3.08318 2.59169 3.13154 0.17955 22 - -
30309 1.38629 1.38629 1.38629 1.38629
30310 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30311 23 3.42690 0.13095 3.47662 2.82448 23 - -
30312 1.38629 1.38629 1.38629 1.38629
30313 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30314 24 2.94377 3.58229 0.11776 3.48639 24 - -
30315 1.38629 1.38629 1.38629 1.38629
30316 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30317 25 2.94377 3.58229 0.11776 3.48639 25 - -
30318 1.38629 1.38629 1.38629 1.38629
30319 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30320 26 3.42690 0.13095 3.47662 2.82448 26 - -
30321 1.38629 1.38629 1.38629 1.38629
30322 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30323 27 3.08318 2.59169 3.13154 0.17955 27 - -
30324 1.38629 1.38629 1.38629 1.38629
30325 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30326 28 3.42690 0.13095 3.47662 2.82448 28 - -
30327 1.38629 1.38629 1.38629 1.38629
30328 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30329 29 2.94377 3.58229 0.11776 3.48639 29 - -
30330 1.38629 1.38629 1.38629 1.38629
30331 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30332 30 3.08318 2.59169 3.13154 0.17955 30 - -
30333 1.38629 1.38629 1.38629 1.38629
30334 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30335 31 2.94377 3.58229 0.11776 3.48639 31 - -
30336 1.38629 1.38629 1.38629 1.38629
30337 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30338 32 2.94377 3.58229 0.11776 3.48639 32 - -
30339 1.38629 1.38629 1.38629 1.38629
30340 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30341 33 0.14261 3.37488 2.79843 3.27603 33 - -
30342 1.38629 1.38629 1.38629 1.38629
30343 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30344 34 3.08318 2.59169 3.13154 0.17955 34 - -
30345 1.38629 1.38629 1.38629 1.38629
30346 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30347 35 3.42690 0.13095 3.47662 2.82448 35 - -
30348 1.38629 1.38629 1.38629 1.38629
30349 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30350 36 2.94377 3.58229 0.11776 3.48639 36 - -
30351 1.38629 1.38629 1.38629 1.38629
30352 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30353 37 0.14261 3.37488 2.79843 3.27603 37 - -
30354 1.38629 1.38629 1.38629 1.38629
30355 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30356 38 3.08318 2.59169 3.13154 0.17955 38 - -
30357 1.38629 1.38629 1.38629 1.38629
30358 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30359 39 2.94377 3.58229 0.11776 3.48639 39 - -
30360 1.38629 1.38629 1.38629 1.38629
30361 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30362 40 0.14261 3.37488 2.79843 3.27603 40 - -
30363 1.38629 1.38629 1.38629 1.38629
30364 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30365 41 0.14261 3.37488 2.79843 3.27603 41 - -
30366 1.38629 1.38629 1.38629 1.38629
30367 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30368 42 2.94377 3.58229 0.11776 3.48639 42 - -
30369 1.38629 1.38629 1.38629 1.38629
30370 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30371 43 0.14261 3.37488 2.79843 3.27603 43 - -
30372 1.38629 1.38629 1.38629 1.38629
30373 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30374 44 0.14261 3.37488 2.79843 3.27603 44 - -
30375 1.38629 1.38629 1.38629 1.38629
30376 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547
30377 45 3.42690 0.13095 3.47662 2.82448 45 - -
30378 1.38629 1.38629 1.38629 1.38629
30379 0.01867 3.99008 * 1.46634 0.26236 0.00000 *
30380 //
30381 HMMER3/b [3.0 | March 2010]
30382 NAME 2_5.8_Metazoa_58S_start_threec_long
30383 LENG 45
30384 ALPH DNA
30385 RF no
30386 CS no
30387 MAP yes
30388 DATE Fri Feb 24 23:14:16 2012
30389 NSEQ 2
30390 EFFN 2.000000
30391 CKSUM 2545387361
30392 STATS LOCAL MSV -7.5549 0.72799
30393 STATS LOCAL VITERBI -8.0703 0.72799
30394 STATS LOCAL FORWARD -3.5515 0.72799
30395 HMM A C G T
30396 m->m m->i m->d i->m i->i d->m d->d
30397 COMPO 1.45791 1.39682 1.31896 1.37642
30398 1.38629 1.38629 1.38629 1.38629
30399 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
30400 1 2.81865 0.23582 2.88868 2.35662 1 - -
30401 1.38629 1.38629 1.38629 1.38629
30402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30403 2 2.57915 2.25909 2.64442 0.28946 2 - -
30404 1.38629 1.38629 1.38629 1.38629
30405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30406 3 0.23862 2.84929 2.43386 2.70756 3 - -
30407 1.38629 1.38629 1.38629 1.38629
30408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30409 4 2.53331 3.02441 0.20344 2.88069 4 - -
30410 1.38629 1.38629 1.38629 1.38629
30411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30412 5 2.57915 2.25909 2.64442 0.28946 5 - -
30413 1.38629 1.38629 1.38629 1.38629
30414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30415 6 2.81865 0.23582 2.88868 2.35662 6 - -
30416 1.38629 1.38629 1.38629 1.38629
30417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30418 7 2.57915 2.25909 2.64442 0.28946 7 - -
30419 1.38629 1.38629 1.38629 1.38629
30420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30421 8 2.57915 2.25909 2.64442 0.28946 8 - -
30422 1.38629 1.38629 1.38629 1.38629
30423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30424 9 0.23862 2.84929 2.43386 2.70756 9 - -
30425 1.38629 1.38629 1.38629 1.38629
30426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30427 10 2.57915 2.25909 2.64442 0.28946 10 - -
30428 1.38629 1.38629 1.38629 1.38629
30429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30430 11 2.81865 0.23582 2.88868 2.35662 11 - -
30431 1.38629 1.38629 1.38629 1.38629
30432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30433 12 2.53331 3.02441 0.20344 2.88069 12 - -
30434 1.38629 1.38629 1.38629 1.38629
30435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30436 13 2.53331 3.02441 0.20344 2.88069 13 - -
30437 1.38629 1.38629 1.38629 1.38629
30438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30439 14 2.81865 0.23582 2.88868 2.35662 14 - -
30440 1.38629 1.38629 1.38629 1.38629
30441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30442 15 2.53331 3.02441 0.20344 2.88069 15 - -
30443 1.38629 1.38629 1.38629 1.38629
30444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30445 16 2.53331 3.02441 0.20344 2.88069 16 - -
30446 1.38629 1.38629 1.38629 1.38629
30447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30448 17 0.23862 2.84929 2.43386 2.70756 17 - -
30449 1.38629 1.38629 1.38629 1.38629
30450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30451 18 2.57915 2.25909 2.64442 0.28946 18 - -
30452 1.38629 1.38629 1.38629 1.38629
30453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30454 19 2.81865 0.23582 2.88868 2.35662 19 - -
30455 1.38629 1.38629 1.38629 1.38629
30456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30457 20 0.23862 2.84929 2.43386 2.70756 20 - -
30458 1.38629 1.38629 1.38629 1.38629
30459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30460 21 2.81865 0.23582 2.88868 2.35662 21 - -
30461 1.38629 1.38629 1.38629 1.38629
30462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30463 22 2.57915 2.25909 2.64442 0.28946 22 - -
30464 1.38629 1.38629 1.38629 1.38629
30465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30466 23 2.81865 0.23582 2.88868 2.35662 23 - -
30467 1.38629 1.38629 1.38629 1.38629
30468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30469 24 2.53331 3.02441 0.20344 2.88069 24 - -
30470 1.38629 1.38629 1.38629 1.38629
30471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30472 25 2.53331 3.02441 0.20344 2.88069 25 - -
30473 1.38629 1.38629 1.38629 1.38629
30474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30475 26 2.81865 0.23582 2.88868 2.35662 26 - -
30476 1.38629 1.38629 1.38629 1.38629
30477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30478 27 2.57915 2.25909 2.64442 0.28946 27 - -
30479 1.38629 1.38629 1.38629 1.38629
30480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30481 28 2.81865 0.23582 2.88868 2.35662 28 - -
30482 1.38629 1.38629 1.38629 1.38629
30483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30484 29 2.53331 3.02441 0.20344 2.88069 29 - -
30485 1.38629 1.38629 1.38629 1.38629
30486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30487 30 2.57915 2.25909 2.64442 0.28946 30 - -
30488 1.38629 1.38629 1.38629 1.38629
30489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30490 31 0.23862 2.84929 2.43386 2.70756 31 - -
30491 1.38629 1.38629 1.38629 1.38629
30492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30493 32 2.53331 3.02441 0.20344 2.88069 32 - -
30494 1.38629 1.38629 1.38629 1.38629
30495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30496 33 2.53331 3.02441 0.20344 2.88069 33 - -
30497 1.38629 1.38629 1.38629 1.38629
30498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30499 34 2.57915 2.25909 2.64442 0.28946 34 - -
30500 1.38629 1.38629 1.38629 1.38629
30501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30502 35 2.81865 0.23582 2.88868 2.35662 35 - -
30503 1.38629 1.38629 1.38629 1.38629
30504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30505 36 2.57915 2.25909 2.64442 0.28946 36 - -
30506 1.38629 1.38629 1.38629 1.38629
30507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30508 37 0.23862 2.84929 2.43386 2.70756 37 - -
30509 1.38629 1.38629 1.38629 1.38629
30510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30511 38 2.57915 2.25909 2.64442 0.28946 38 - -
30512 1.38629 1.38629 1.38629 1.38629
30513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30514 39 2.53331 3.02441 0.20344 2.88069 39 - -
30515 1.38629 1.38629 1.38629 1.38629
30516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30517 40 0.23862 2.84929 2.43386 2.70756 40 - -
30518 1.38629 1.38629 1.38629 1.38629
30519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30520 41 0.23862 2.84929 2.43386 2.70756 41 - -
30521 1.38629 1.38629 1.38629 1.38629
30522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30523 42 2.53331 3.02441 0.20344 2.88069 42 - -
30524 1.38629 1.38629 1.38629 1.38629
30525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30526 43 0.23862 2.84929 2.43386 2.70756 43 - -
30527 1.38629 1.38629 1.38629 1.38629
30528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30529 44 0.23862 2.84929 2.43386 2.70756 44 - -
30530 1.38629 1.38629 1.38629 1.38629
30531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
30532 45 2.81865 0.23582 2.88868 2.35662 45 - -
30533 1.38629 1.38629 1.38629 1.38629
30534 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
30535 //
30536 HMMER3/b [3.0 | March 2010]
30537 NAME 2_5.8_Metazoa_58S_start_threed_long
30538 LENG 45
30539 ALPH DNA
30540 RF no
30541 CS no
30542 MAP yes
30543 DATE Fri Feb 24 23:14:21 2012
30544 NSEQ 45
30545 EFFN 3.683167
30546 CKSUM 4010874590
30547 STATS LOCAL MSV -7.4061 0.71931
30548 STATS LOCAL VITERBI -7.6816 0.71931
30549 STATS LOCAL FORWARD -4.2977 0.71931
30550 HMM A C G T
30551 m->m m->i m->d i->m i->i d->m d->d
30552 COMPO 1.49218 1.44109 1.26114 1.36603
30553 1.38629 1.38629 1.38629 1.38629
30554 0.03459 4.07468 4.07468 1.46634 0.26236 0.00000 *
30555 1 3.55794 0.11626 3.60194 2.91903 1 - -
30556 1.38629 1.38629 1.38629 1.38629
30557 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30558 2 2.07066 2.41571 2.68444 0.33361 2 - -
30559 1.38629 1.38629 1.38629 1.38629
30560 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30561 3 0.12833 3.48903 2.87216 3.40119 3 - -
30562 1.38629 1.38629 1.38629 1.38629
30563 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30564 4 2.91264 3.46927 0.13977 3.10184 4 - -
30565 1.38629 1.38629 1.38629 1.38629
30566 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30567 5 2.97042 2.13237 3.02366 0.24649 5 - -
30568 1.38629 1.38629 1.38629 1.38629
30569 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30570 6 3.55794 0.11626 3.60194 2.91903 6 - -
30571 1.38629 1.38629 1.38629 1.38629
30572 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30573 7 3.19979 2.66569 3.24363 0.16175 7 - -
30574 1.38629 1.38629 1.38629 1.38629
30575 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30576 8 3.19979 2.66569 3.24363 0.16175 8 - -
30577 1.38629 1.38629 1.38629 1.38629
30578 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30579 9 0.12833 3.48903 2.87216 3.40119 9 - -
30580 1.38629 1.38629 1.38629 1.38629
30581 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30582 10 3.19979 2.66569 3.24363 0.16175 10 - -
30583 1.38629 1.38629 1.38629 1.38629
30584 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30585 11 3.55794 0.11626 3.60194 2.91903 11 - -
30586 1.38629 1.38629 1.38629 1.38629
30587 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30588 12 3.02197 3.69692 0.10588 3.61320 12 - -
30589 1.38629 1.38629 1.38629 1.38629
30590 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30591 13 3.02197 3.69692 0.10588 3.61320 13 - -
30592 1.38629 1.38629 1.38629 1.38629
30593 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30594 14 3.19979 2.66569 3.24363 0.16175 14 - -
30595 1.38629 1.38629 1.38629 1.38629
30596 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30597 15 3.02197 3.69692 0.10588 3.61320 15 - -
30598 1.38629 1.38629 1.38629 1.38629
30599 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30600 16 3.02197 3.69692 0.10588 3.61320 16 - -
30601 1.38629 1.38629 1.38629 1.38629
30602 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30603 17 0.12833 3.48903 2.87216 3.40119 17 - -
30604 1.38629 1.38629 1.38629 1.38629
30605 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30606 18 3.19979 2.66569 3.24363 0.16175 18 - -
30607 1.38629 1.38629 1.38629 1.38629
30608 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30609 19 3.55794 0.11626 3.60194 2.91903 19 - -
30610 1.38629 1.38629 1.38629 1.38629
30611 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30612 20 0.12833 3.48903 2.87216 3.40119 20 - -
30613 1.38629 1.38629 1.38629 1.38629
30614 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30615 21 3.55794 0.11626 3.60194 2.91903 21 - -
30616 1.38629 1.38629 1.38629 1.38629
30617 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30618 22 3.19979 2.66569 3.24363 0.16175 22 - -
30619 1.38629 1.38629 1.38629 1.38629
30620 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30621 23 3.55794 0.11626 3.60194 2.91903 23 - -
30622 1.38629 1.38629 1.38629 1.38629
30623 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30624 24 3.02197 3.69692 0.10588 3.61320 24 - -
30625 1.38629 1.38629 1.38629 1.38629
30626 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30627 25 3.02197 3.69692 0.10588 3.61320 25 - -
30628 1.38629 1.38629 1.38629 1.38629
30629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30630 26 3.55794 0.11626 3.60194 2.91903 26 - -
30631 1.38629 1.38629 1.38629 1.38629
30632 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30633 27 3.19979 2.66569 3.24363 0.16175 27 - -
30634 1.38629 1.38629 1.38629 1.38629
30635 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30636 28 3.55794 0.11626 3.60194 2.91903 28 - -
30637 1.38629 1.38629 1.38629 1.38629
30638 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30639 29 3.02197 3.69692 0.10588 3.61320 29 - -
30640 1.38629 1.38629 1.38629 1.38629
30641 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30642 30 3.11654 2.45448 3.16369 0.18933 30 - -
30643 1.38629 1.38629 1.38629 1.38629
30644 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30645 31 0.75718 2.58056 0.99991 2.43760 31 - -
30646 1.38629 1.38629 1.38629 1.38629
30647 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30648 32 3.02197 3.69692 0.10588 3.61320 32 - -
30649 1.38629 1.38629 1.38629 1.38629
30650 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30651 33 1.66714 2.17550 0.79154 1.40848 33 - -
30652 1.38629 1.38629 1.38629 1.38629
30653 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30654 34 3.19979 2.66569 3.24363 0.16175 34 - -
30655 1.38629 1.38629 1.38629 1.38629
30656 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30657 35 3.55794 0.11626 3.60194 2.91903 35 - -
30658 1.38629 1.38629 1.38629 1.38629
30659 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30660 36 3.02197 3.69692 0.10588 3.61320 36 - -
30661 1.38629 1.38629 1.38629 1.38629
30662 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30663 37 0.12833 3.48903 2.87216 3.40119 37 - -
30664 1.38629 1.38629 1.38629 1.38629
30665 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30666 38 3.19979 2.66569 3.24363 0.16175 38 - -
30667 1.38629 1.38629 1.38629 1.38629
30668 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30669 39 3.02197 3.69692 0.10588 3.61320 39 - -
30670 1.38629 1.38629 1.38629 1.38629
30671 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30672 40 0.12833 3.48903 2.87216 3.40119 40 - -
30673 1.38629 1.38629 1.38629 1.38629
30674 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30675 41 0.12833 3.48903 2.87216 3.40119 41 - -
30676 1.38629 1.38629 1.38629 1.38629
30677 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30678 42 3.02197 3.69692 0.10588 3.61320 42 - -
30679 1.38629 1.38629 1.38629 1.38629
30680 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30681 43 0.12833 3.48903 2.87216 3.40119 43 - -
30682 1.38629 1.38629 1.38629 1.38629
30683 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30684 44 0.12833 3.48903 2.87216 3.40119 44 - -
30685 1.38629 1.38629 1.38629 1.38629
30686 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547
30687 45 3.55794 0.11626 3.60194 2.91903 45 - -
30688 1.38629 1.38629 1.38629 1.38629
30689 0.01744 4.05754 * 1.46634 0.26236 0.00000 *
30690 //
30691 HMMER3/b [3.0 | March 2010]
30692 NAME 2_5.8_Metazoa_58S_start_threee_long
30693 LENG 45
30694 ALPH DNA
30695 RF no
30696 CS no
30697 MAP yes
30698 DATE Fri Feb 24 23:14:26 2012
30699 NSEQ 11
30700 EFFN 3.246826
30701 CKSUM 1748157936
30702 STATS LOCAL MSV -7.9085 0.71932
30703 STATS LOCAL VITERBI -7.7074 0.71932
30704 STATS LOCAL FORWARD -4.1988 0.71932
30705 HMM A C G T
30706 m->m m->i m->d i->m i->i d->m d->d
30707 COMPO 1.40311 1.45887 1.31500 1.37360
30708 1.38629 1.38629 1.38629 1.38629
30709 0.03741 3.99762 3.99762 1.46634 0.26236 0.00000 *
30710 1 3.40474 0.13364 3.45540 2.80830 1 - -
30711 1.38629 1.38629 1.38629 1.38629
30712 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30713 2 3.06385 2.57938 3.11295 0.18272 2 - -
30714 1.38629 1.38629 1.38629 1.38629
30715 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30716 3 0.14519 3.35567 2.78592 3.25501 3 - -
30717 1.38629 1.38629 1.38629 1.38629
30718 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30719 4 0.14519 3.35567 2.78592 3.25501 4 - -
30720 1.38629 1.38629 1.38629 1.38629
30721 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30722 5 3.06385 2.57938 3.11295 0.18272 5 - -
30723 1.38629 1.38629 1.38629 1.38629
30724 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30725 6 3.40474 0.13364 3.45540 2.80830 6 - -
30726 1.38629 1.38629 1.38629 1.38629
30727 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30728 7 3.06385 2.57938 3.11295 0.18272 7 - -
30729 1.38629 1.38629 1.38629 1.38629
30730 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30731 8 3.06385 2.57938 3.11295 0.18272 8 - -
30732 1.38629 1.38629 1.38629 1.38629
30733 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30734 9 0.14519 3.35567 2.78592 3.25501 9 - -
30735 1.38629 1.38629 1.38629 1.38629
30736 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30737 10 3.06385 2.57938 3.11295 0.18272 10 - -
30738 1.38629 1.38629 1.38629 1.38629
30739 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30740 11 3.40474 0.13364 3.45540 2.80830 11 - -
30741 1.38629 1.38629 1.38629 1.38629
30742 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30743 12 2.93029 3.56274 0.11993 3.46483 12 - -
30744 1.38629 1.38629 1.38629 1.38629
30745 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30746 13 2.93029 3.56274 0.11993 3.46483 13 - -
30747 1.38629 1.38629 1.38629 1.38629
30748 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30749 14 3.06385 2.57938 3.11295 0.18272 14 - -
30750 1.38629 1.38629 1.38629 1.38629
30751 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30752 15 2.93029 3.56274 0.11993 3.46483 15 - -
30753 1.38629 1.38629 1.38629 1.38629
30754 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30755 16 2.93029 3.56274 0.11993 3.46483 16 - -
30756 1.38629 1.38629 1.38629 1.38629
30757 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30758 17 0.14519 3.35567 2.78592 3.25501 17 - -
30759 1.38629 1.38629 1.38629 1.38629
30760 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30761 18 3.06385 2.57938 3.11295 0.18272 18 - -
30762 1.38629 1.38629 1.38629 1.38629
30763 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30764 19 3.40474 0.13364 3.45540 2.80830 19 - -
30765 1.38629 1.38629 1.38629 1.38629
30766 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30767 20 0.14519 3.35567 2.78592 3.25501 20 - -
30768 1.38629 1.38629 1.38629 1.38629
30769 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30770 21 3.40474 0.13364 3.45540 2.80830 21 - -
30771 1.38629 1.38629 1.38629 1.38629
30772 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30773 22 3.06385 2.57938 3.11295 0.18272 22 - -
30774 1.38629 1.38629 1.38629 1.38629
30775 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30776 23 3.40474 0.13364 3.45540 2.80830 23 - -
30777 1.38629 1.38629 1.38629 1.38629
30778 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30779 24 2.93029 3.56274 0.11993 3.46483 24 - -
30780 1.38629 1.38629 1.38629 1.38629
30781 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30782 25 2.93029 3.56274 0.11993 3.46483 25 - -
30783 1.38629 1.38629 1.38629 1.38629
30784 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30785 26 3.40474 0.13364 3.45540 2.80830 26 - -
30786 1.38629 1.38629 1.38629 1.38629
30787 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30788 27 3.06385 2.57938 3.11295 0.18272 27 - -
30789 1.38629 1.38629 1.38629 1.38629
30790 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30791 28 3.40474 0.13364 3.45540 2.80830 28 - -
30792 1.38629 1.38629 1.38629 1.38629
30793 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30794 29 2.93029 3.56274 0.11993 3.46483 29 - -
30795 1.38629 1.38629 1.38629 1.38629
30796 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30797 30 3.06385 2.57938 3.11295 0.18272 30 - -
30798 1.38629 1.38629 1.38629 1.38629
30799 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30800 31 2.93029 3.56274 0.11993 3.46483 31 - -
30801 1.38629 1.38629 1.38629 1.38629
30802 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30803 32 2.93029 3.56274 0.11993 3.46483 32 - -
30804 1.38629 1.38629 1.38629 1.38629
30805 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30806 33 2.93029 3.56274 0.11993 3.46483 33 - -
30807 1.38629 1.38629 1.38629 1.38629
30808 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30809 34 3.06385 2.57938 3.11295 0.18272 34 - -
30810 1.38629 1.38629 1.38629 1.38629
30811 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30812 35 3.40474 0.13364 3.45540 2.80830 35 - -
30813 1.38629 1.38629 1.38629 1.38629
30814 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30815 36 2.93029 3.56274 0.11993 3.46483 36 - -
30816 1.38629 1.38629 1.38629 1.38629
30817 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30818 37 0.14519 3.35567 2.78592 3.25501 37 - -
30819 1.38629 1.38629 1.38629 1.38629
30820 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30821 38 3.06385 2.57938 3.11295 0.18272 38 - -
30822 1.38629 1.38629 1.38629 1.38629
30823 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30824 39 0.14519 3.35567 2.78592 3.25501 39 - -
30825 1.38629 1.38629 1.38629 1.38629
30826 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30827 40 0.14519 3.35567 2.78592 3.25501 40 - -
30828 1.38629 1.38629 1.38629 1.38629
30829 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30830 41 0.14519 3.35567 2.78592 3.25501 41 - -
30831 1.38629 1.38629 1.38629 1.38629
30832 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30833 42 2.93029 3.56274 0.11993 3.46483 42 - -
30834 1.38629 1.38629 1.38629 1.38629
30835 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30836 43 0.14519 3.35567 2.78592 3.25501 43 - -
30837 1.38629 1.38629 1.38629 1.38629
30838 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30839 44 0.14519 3.35567 2.78592 3.25501 44 - -
30840 1.38629 1.38629 1.38629 1.38629
30841 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547
30842 45 3.40474 0.13364 3.45540 2.80830 45 - -
30843 1.38629 1.38629 1.38629 1.38629
30844 0.01888 3.97909 * 1.46634 0.26236 0.00000 *
30845 //
30846 HMMER3/b [3.0 | March 2010]
30847 NAME 2_5.8_Metazoa_58S_start_threef_long
30848 LENG 45
30849 ALPH DNA
30850 RF no
30851 CS no
30852 MAP yes
30853 DATE Fri Feb 24 23:14:31 2012
30854 NSEQ 6
30855 EFFN 3.260742
30856 CKSUM 2895050922
30857 STATS LOCAL MSV -8.0239 0.71933
30858 STATS LOCAL VITERBI -7.6662 0.71933
30859 STATS LOCAL FORWARD -4.3060 0.71933
30860 HMM A C G T
30861 m->m m->i m->d i->m i->i d->m d->d
30862 COMPO 1.47461 1.45532 1.31571 1.31109
30863 1.38629 1.38629 1.38629 1.38629
30864 0.03731 4.00017 4.00017 1.46634 0.26236 0.00000 *
30865 1 3.41001 0.13300 3.46044 2.81215 1 - -
30866 1.38629 1.38629 1.38629 1.38629
30867 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30868 2 3.06843 2.58230 3.11735 0.18196 2 - -
30869 1.38629 1.38629 1.38629 1.38629
30870 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30871 3 0.14457 3.36023 2.78889 3.26000 3 - -
30872 1.38629 1.38629 1.38629 1.38629
30873 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30874 4 2.93350 3.56738 0.11941 3.46995 4 - -
30875 1.38629 1.38629 1.38629 1.38629
30876 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30877 5 3.06843 2.58230 3.11735 0.18196 5 - -
30878 1.38629 1.38629 1.38629 1.38629
30879 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30880 6 3.41001 0.13300 3.46044 2.81215 6 - -
30881 1.38629 1.38629 1.38629 1.38629
30882 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30883 7 3.06843 2.58230 3.11735 0.18196 7 - -
30884 1.38629 1.38629 1.38629 1.38629
30885 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30886 8 3.06843 2.58230 3.11735 0.18196 8 - -
30887 1.38629 1.38629 1.38629 1.38629
30888 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30889 9 0.14457 3.36023 2.78889 3.26000 9 - -
30890 1.38629 1.38629 1.38629 1.38629
30891 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30892 10 3.06843 2.58230 3.11735 0.18196 10 - -
30893 1.38629 1.38629 1.38629 1.38629
30894 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30895 11 3.41001 0.13300 3.46044 2.81215 11 - -
30896 1.38629 1.38629 1.38629 1.38629
30897 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30898 12 2.93350 3.56738 0.11941 3.46995 12 - -
30899 1.38629 1.38629 1.38629 1.38629
30900 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30901 13 2.93350 3.56738 0.11941 3.46995 13 - -
30902 1.38629 1.38629 1.38629 1.38629
30903 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30904 14 3.06843 2.58230 3.11735 0.18196 14 - -
30905 1.38629 1.38629 1.38629 1.38629
30906 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30907 15 2.93350 3.56738 0.11941 3.46995 15 - -
30908 1.38629 1.38629 1.38629 1.38629
30909 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30910 16 2.93350 3.56738 0.11941 3.46995 16 - -
30911 1.38629 1.38629 1.38629 1.38629
30912 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30913 17 0.14457 3.36023 2.78889 3.26000 17 - -
30914 1.38629 1.38629 1.38629 1.38629
30915 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30916 18 3.06843 2.58230 3.11735 0.18196 18 - -
30917 1.38629 1.38629 1.38629 1.38629
30918 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30919 19 3.41001 0.13300 3.46044 2.81215 19 - -
30920 1.38629 1.38629 1.38629 1.38629
30921 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30922 20 0.14457 3.36023 2.78889 3.26000 20 - -
30923 1.38629 1.38629 1.38629 1.38629
30924 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30925 21 3.41001 0.13300 3.46044 2.81215 21 - -
30926 1.38629 1.38629 1.38629 1.38629
30927 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30928 22 3.06843 2.58230 3.11735 0.18196 22 - -
30929 1.38629 1.38629 1.38629 1.38629
30930 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30931 23 3.41001 0.13300 3.46044 2.81215 23 - -
30932 1.38629 1.38629 1.38629 1.38629
30933 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30934 24 2.93350 3.56738 0.11941 3.46995 24 - -
30935 1.38629 1.38629 1.38629 1.38629
30936 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30937 25 2.93350 3.56738 0.11941 3.46995 25 - -
30938 1.38629 1.38629 1.38629 1.38629
30939 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30940 26 3.41001 0.13300 3.46044 2.81215 26 - -
30941 1.38629 1.38629 1.38629 1.38629
30942 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30943 27 3.06843 2.58230 3.11735 0.18196 27 - -
30944 1.38629 1.38629 1.38629 1.38629
30945 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30946 28 3.41001 0.13300 3.46044 2.81215 28 - -
30947 1.38629 1.38629 1.38629 1.38629
30948 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30949 29 2.93350 3.56738 0.11941 3.46995 29 - -
30950 1.38629 1.38629 1.38629 1.38629
30951 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30952 30 3.06843 2.58230 3.11735 0.18196 30 - -
30953 1.38629 1.38629 1.38629 1.38629
30954 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30955 31 0.14457 3.36023 2.78889 3.26000 31 - -
30956 1.38629 1.38629 1.38629 1.38629
30957 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30958 32 2.93350 3.56738 0.11941 3.46995 32 - -
30959 1.38629 1.38629 1.38629 1.38629
30960 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30961 33 3.06843 2.58230 3.11735 0.18196 33 - -
30962 1.38629 1.38629 1.38629 1.38629
30963 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30964 34 3.06843 2.58230 3.11735 0.18196 34 - -
30965 1.38629 1.38629 1.38629 1.38629
30966 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30967 35 3.41001 0.13300 3.46044 2.81215 35 - -
30968 1.38629 1.38629 1.38629 1.38629
30969 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30970 36 2.93350 3.56738 0.11941 3.46995 36 - -
30971 1.38629 1.38629 1.38629 1.38629
30972 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30973 37 0.14457 3.36023 2.78889 3.26000 37 - -
30974 1.38629 1.38629 1.38629 1.38629
30975 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30976 38 3.06843 2.58230 3.11735 0.18196 38 - -
30977 1.38629 1.38629 1.38629 1.38629
30978 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30979 39 2.93350 3.56738 0.11941 3.46995 39 - -
30980 1.38629 1.38629 1.38629 1.38629
30981 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30982 40 0.14457 3.36023 2.78889 3.26000 40 - -
30983 1.38629 1.38629 1.38629 1.38629
30984 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30985 41 0.14457 3.36023 2.78889 3.26000 41 - -
30986 1.38629 1.38629 1.38629 1.38629
30987 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30988 42 2.93350 3.56738 0.11941 3.46995 42 - -
30989 1.38629 1.38629 1.38629 1.38629
30990 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30991 43 0.14457 3.36023 2.78889 3.26000 43 - -
30992 1.38629 1.38629 1.38629 1.38629
30993 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30994 44 0.14457 3.36023 2.78889 3.26000 44 - -
30995 1.38629 1.38629 1.38629 1.38629
30996 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
30997 45 3.41001 0.13300 3.46044 2.81215 45 - -
30998 1.38629 1.38629 1.38629 1.38629
30999 0.01883 3.98169 * 1.46634 0.26236 0.00000 *
31000 //
31001 HMMER3/b [3.0 | March 2010]
31002 NAME 2_5.8_Metazoa_58S_start_threeg_long
31003 LENG 45
31004 ALPH DNA
31005 RF no
31006 CS no
31007 MAP yes
31008 DATE Fri Feb 24 23:14:36 2012
31009 NSEQ 4
31010 EFFN 3.246094
31011 CKSUM 3441283875
31012 STATS LOCAL MSV -7.9932 0.71931
31013 STATS LOCAL VITERBI -7.7567 0.71931
31014 STATS LOCAL FORWARD -4.3175 0.71931
31015 HMM A C G T
31016 m->m m->i m->d i->m i->i d->m d->d
31017 COMPO 1.54718 1.53589 1.19538 1.31193
31018 1.38629 1.38629 1.38629 1.38629
31019 0.03741 3.99748 3.99748 1.46634 0.26236 0.00000 *
31020 1 3.06361 2.57923 3.11272 0.18276 1 - -
31021 1.38629 1.38629 1.38629 1.38629
31022 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31023 2 3.06361 2.57923 3.11272 0.18276 2 - -
31024 1.38629 1.38629 1.38629 1.38629
31025 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31026 3 0.14522 3.35543 2.78576 3.25475 3 - -
31027 1.38629 1.38629 1.38629 1.38629
31028 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31029 4 0.14522 3.35543 2.78576 3.25475 4 - -
31030 1.38629 1.38629 1.38629 1.38629
31031 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31032 5 3.06361 2.57923 3.11272 0.18276 5 - -
31033 1.38629 1.38629 1.38629 1.38629
31034 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31035 6 3.40447 0.13368 3.45513 2.80810 6 - -
31036 1.38629 1.38629 1.38629 1.38629
31037 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31038 7 3.06361 2.57923 3.11272 0.18276 7 - -
31039 1.38629 1.38629 1.38629 1.38629
31040 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31041 8 3.06361 2.57923 3.11272 0.18276 8 - -
31042 1.38629 1.38629 1.38629 1.38629
31043 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31044 9 0.14522 3.35543 2.78576 3.25475 9 - -
31045 1.38629 1.38629 1.38629 1.38629
31046 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31047 10 3.06361 2.57923 3.11272 0.18276 10 - -
31048 1.38629 1.38629 1.38629 1.38629
31049 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31050 11 3.40447 0.13368 3.45513 2.80810 11 - -
31051 1.38629 1.38629 1.38629 1.38629
31052 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31053 12 2.93012 3.56249 0.11996 3.46456 12 - -
31054 1.38629 1.38629 1.38629 1.38629
31055 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31056 13 2.93012 3.56249 0.11996 3.46456 13 - -
31057 1.38629 1.38629 1.38629 1.38629
31058 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31059 14 3.06361 2.57923 3.11272 0.18276 14 - -
31060 1.38629 1.38629 1.38629 1.38629
31061 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31062 15 2.93012 3.56249 0.11996 3.46456 15 - -
31063 1.38629 1.38629 1.38629 1.38629
31064 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31065 16 2.93012 3.56249 0.11996 3.46456 16 - -
31066 1.38629 1.38629 1.38629 1.38629
31067 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31068 17 0.14522 3.35543 2.78576 3.25475 17 - -
31069 1.38629 1.38629 1.38629 1.38629
31070 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31071 18 3.06361 2.57923 3.11272 0.18276 18 - -
31072 1.38629 1.38629 1.38629 1.38629
31073 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31074 19 3.40447 0.13368 3.45513 2.80810 19 - -
31075 1.38629 1.38629 1.38629 1.38629
31076 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31077 20 0.14522 3.35543 2.78576 3.25475 20 - -
31078 1.38629 1.38629 1.38629 1.38629
31079 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31080 21 3.40447 0.13368 3.45513 2.80810 21 - -
31081 1.38629 1.38629 1.38629 1.38629
31082 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31083 22 3.06361 2.57923 3.11272 0.18276 22 - -
31084 1.38629 1.38629 1.38629 1.38629
31085 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31086 23 3.40447 0.13368 3.45513 2.80810 23 - -
31087 1.38629 1.38629 1.38629 1.38629
31088 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31089 24 2.93012 3.56249 0.11996 3.46456 24 - -
31090 1.38629 1.38629 1.38629 1.38629
31091 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31092 25 2.93012 3.56249 0.11996 3.46456 25 - -
31093 1.38629 1.38629 1.38629 1.38629
31094 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31095 26 3.40447 0.13368 3.45513 2.80810 26 - -
31096 1.38629 1.38629 1.38629 1.38629
31097 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31098 27 3.06361 2.57923 3.11272 0.18276 27 - -
31099 1.38629 1.38629 1.38629 1.38629
31100 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31101 28 3.40447 0.13368 3.45513 2.80810 28 - -
31102 1.38629 1.38629 1.38629 1.38629
31103 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31104 29 2.93012 3.56249 0.11996 3.46456 29 - -
31105 1.38629 1.38629 1.38629 1.38629
31106 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31107 30 3.06361 2.57923 3.11272 0.18276 30 - -
31108 1.38629 1.38629 1.38629 1.38629
31109 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31110 31 2.93012 3.56249 0.11996 3.46456 31 - -
31111 1.38629 1.38629 1.38629 1.38629
31112 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31113 32 2.93012 3.56249 0.11996 3.46456 32 - -
31114 1.38629 1.38629 1.38629 1.38629
31115 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31116 33 2.93012 3.56249 0.11996 3.46456 33 - -
31117 1.38629 1.38629 1.38629 1.38629
31118 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31119 34 3.06361 2.57923 3.11272 0.18276 34 - -
31120 1.38629 1.38629 1.38629 1.38629
31121 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31122 35 3.40447 0.13368 3.45513 2.80810 35 - -
31123 1.38629 1.38629 1.38629 1.38629
31124 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31125 36 2.93012 3.56249 0.11996 3.46456 36 - -
31126 1.38629 1.38629 1.38629 1.38629
31127 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31128 37 0.14522 3.35543 2.78576 3.25475 37 - -
31129 1.38629 1.38629 1.38629 1.38629
31130 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31131 38 3.06361 2.57923 3.11272 0.18276 38 - -
31132 1.38629 1.38629 1.38629 1.38629
31133 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31134 39 2.93012 3.56249 0.11996 3.46456 39 - -
31135 1.38629 1.38629 1.38629 1.38629
31136 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31137 40 0.14522 3.35543 2.78576 3.25475 40 - -
31138 1.38629 1.38629 1.38629 1.38629
31139 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31140 41 0.14522 3.35543 2.78576 3.25475 41 - -
31141 1.38629 1.38629 1.38629 1.38629
31142 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31143 42 2.93012 3.56249 0.11996 3.46456 42 - -
31144 1.38629 1.38629 1.38629 1.38629
31145 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31146 43 0.14522 3.35543 2.78576 3.25475 43 - -
31147 1.38629 1.38629 1.38629 1.38629
31148 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31149 44 2.93012 3.56249 0.11996 3.46456 44 - -
31150 1.38629 1.38629 1.38629 1.38629
31151 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
31152 45 3.40447 0.13368 3.45513 2.80810 45 - -
31153 1.38629 1.38629 1.38629 1.38629
31154 0.01888 3.97895 * 1.46634 0.26236 0.00000 *
31155 //
31156 HMMER3/b [3.0 | March 2010]
31157 NAME 2_5.8_Metazoa_58S_start_threeh_long
31158 LENG 45
31159 ALPH DNA
31160 RF no
31161 CS no
31162 MAP yes
31163 DATE Fri Feb 24 23:14:40 2012
31164 NSEQ 4
31165 EFFN 3.269531
31166 CKSUM 1714705976
31167 STATS LOCAL MSV -7.9738 0.71932
31168 STATS LOCAL VITERBI -7.6259 0.71932
31169 STATS LOCAL FORWARD -4.2493 0.71932
31170 HMM A C G T
31171 m->m m->i m->d i->m i->i d->m d->d
31172 COMPO 1.40268 1.53488 1.31339 1.31054
31173 1.38629 1.38629 1.38629 1.38629
31174 0.03725 4.00178 4.00178 1.46634 0.26236 0.00000 *
31175 1 3.07131 2.58413 3.12013 0.18149 1 - -
31176 1.38629 1.38629 1.38629 1.38629
31177 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31178 2 3.07131 2.58413 3.12013 0.18149 2 - -
31179 1.38629 1.38629 1.38629 1.38629
31180 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31181 3 0.14418 3.36310 2.79076 3.26314 3 - -
31182 1.38629 1.38629 1.38629 1.38629
31183 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31184 4 2.93551 3.57031 0.11909 3.47317 4 - -
31185 1.38629 1.38629 1.38629 1.38629
31186 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31187 5 3.07131 2.58413 3.12013 0.18149 5 - -
31188 1.38629 1.38629 1.38629 1.38629
31189 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31190 6 3.41331 0.13259 3.46361 2.81457 6 - -
31191 1.38629 1.38629 1.38629 1.38629
31192 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31193 7 3.07131 2.58413 3.12013 0.18149 7 - -
31194 1.38629 1.38629 1.38629 1.38629
31195 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31196 8 3.07131 2.58413 3.12013 0.18149 8 - -
31197 1.38629 1.38629 1.38629 1.38629
31198 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31199 9 0.14418 3.36310 2.79076 3.26314 9 - -
31200 1.38629 1.38629 1.38629 1.38629
31201 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31202 10 3.07131 2.58413 3.12013 0.18149 10 - -
31203 1.38629 1.38629 1.38629 1.38629
31204 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31205 11 3.41331 0.13259 3.46361 2.81457 11 - -
31206 1.38629 1.38629 1.38629 1.38629
31207 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31208 12 2.93551 3.57031 0.11909 3.47317 12 - -
31209 1.38629 1.38629 1.38629 1.38629
31210 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31211 13 2.93551 3.57031 0.11909 3.47317 13 - -
31212 1.38629 1.38629 1.38629 1.38629
31213 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31214 14 3.07131 2.58413 3.12013 0.18149 14 - -
31215 1.38629 1.38629 1.38629 1.38629
31216 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31217 15 2.93551 3.57031 0.11909 3.47317 15 - -
31218 1.38629 1.38629 1.38629 1.38629
31219 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31220 16 2.93551 3.57031 0.11909 3.47317 16 - -
31221 1.38629 1.38629 1.38629 1.38629
31222 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31223 17 0.14418 3.36310 2.79076 3.26314 17 - -
31224 1.38629 1.38629 1.38629 1.38629
31225 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31226 18 3.07131 2.58413 3.12013 0.18149 18 - -
31227 1.38629 1.38629 1.38629 1.38629
31228 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31229 19 3.41331 0.13259 3.46361 2.81457 19 - -
31230 1.38629 1.38629 1.38629 1.38629
31231 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31232 20 0.14418 3.36310 2.79076 3.26314 20 - -
31233 1.38629 1.38629 1.38629 1.38629
31234 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31235 21 3.41331 0.13259 3.46361 2.81457 21 - -
31236 1.38629 1.38629 1.38629 1.38629
31237 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31238 22 3.07131 2.58413 3.12013 0.18149 22 - -
31239 1.38629 1.38629 1.38629 1.38629
31240 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31241 23 3.41331 0.13259 3.46361 2.81457 23 - -
31242 1.38629 1.38629 1.38629 1.38629
31243 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31244 24 2.93551 3.57031 0.11909 3.47317 24 - -
31245 1.38629 1.38629 1.38629 1.38629
31246 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31247 25 2.93551 3.57031 0.11909 3.47317 25 - -
31248 1.38629 1.38629 1.38629 1.38629
31249 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31250 26 3.41331 0.13259 3.46361 2.81457 26 - -
31251 1.38629 1.38629 1.38629 1.38629
31252 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31253 27 3.07131 2.58413 3.12013 0.18149 27 - -
31254 1.38629 1.38629 1.38629 1.38629
31255 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31256 28 3.41331 0.13259 3.46361 2.81457 28 - -
31257 1.38629 1.38629 1.38629 1.38629
31258 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31259 29 2.93551 3.57031 0.11909 3.47317 29 - -
31260 1.38629 1.38629 1.38629 1.38629
31261 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31262 30 3.07131 2.58413 3.12013 0.18149 30 - -
31263 1.38629 1.38629 1.38629 1.38629
31264 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31265 31 0.14418 3.36310 2.79076 3.26314 31 - -
31266 1.38629 1.38629 1.38629 1.38629
31267 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31268 32 2.93551 3.57031 0.11909 3.47317 32 - -
31269 1.38629 1.38629 1.38629 1.38629
31270 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31271 33 0.14418 3.36310 2.79076 3.26314 33 - -
31272 1.38629 1.38629 1.38629 1.38629
31273 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31274 34 3.07131 2.58413 3.12013 0.18149 34 - -
31275 1.38629 1.38629 1.38629 1.38629
31276 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31277 35 3.41331 0.13259 3.46361 2.81457 35 - -
31278 1.38629 1.38629 1.38629 1.38629
31279 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31280 36 2.93551 3.57031 0.11909 3.47317 36 - -
31281 1.38629 1.38629 1.38629 1.38629
31282 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31283 37 0.14418 3.36310 2.79076 3.26314 37 - -
31284 1.38629 1.38629 1.38629 1.38629
31285 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31286 38 3.07131 2.58413 3.12013 0.18149 38 - -
31287 1.38629 1.38629 1.38629 1.38629
31288 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31289 39 2.93551 3.57031 0.11909 3.47317 39 - -
31290 1.38629 1.38629 1.38629 1.38629
31291 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31292 40 0.14418 3.36310 2.79076 3.26314 40 - -
31293 1.38629 1.38629 1.38629 1.38629
31294 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31295 41 0.14418 3.36310 2.79076 3.26314 41 - -
31296 1.38629 1.38629 1.38629 1.38629
31297 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31298 42 2.93551 3.57031 0.11909 3.47317 42 - -
31299 1.38629 1.38629 1.38629 1.38629
31300 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31301 43 0.14418 3.36310 2.79076 3.26314 43 - -
31302 1.38629 1.38629 1.38629 1.38629
31303 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31304 44 0.14418 3.36310 2.79076 3.26314 44 - -
31305 1.38629 1.38629 1.38629 1.38629
31306 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
31307 45 3.41331 0.13259 3.46361 2.81457 45 - -
31308 1.38629 1.38629 1.38629 1.38629
31309 0.01880 3.98333 * 1.46634 0.26236 0.00000 *
31310 //
31311 HMMER3/b [3.0 | March 2010]
31312 NAME 2_5.8_Metazoa_58S_start_threei_long
31313 LENG 45
31314 ALPH DNA
31315 RF no
31316 CS no
31317 MAP yes
31318 DATE Fri Feb 24 23:14:45 2012
31319 NSEQ 4
31320 EFFN 3.285156
31321 CKSUM 3641792887
31322 STATS LOCAL MSV -7.9429 0.71931
31323 STATS LOCAL VITERBI -7.7130 0.71931
31324 STATS LOCAL FORWARD -4.1718 0.71931
31325 HMM A C G T
31326 m->m m->i m->d i->m i->i d->m d->d
31327 COMPO 1.33712 1.53172 1.37863 1.31189
31328 1.38629 1.38629 1.38629 1.38629
31329 0.03714 4.00463 4.00463 1.46634 0.26236 0.00000 *
31330 1 3.41917 0.13188 3.46922 2.81884 1 - -
31331 1.38629 1.38629 1.38629 1.38629
31332 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31333 2 3.07642 2.58739 3.12504 0.18065 2 - -
31334 1.38629 1.38629 1.38629 1.38629
31335 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31336 3 0.14350 3.36817 2.79406 3.26870 3 - -
31337 1.38629 1.38629 1.38629 1.38629
31338 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31339 4 2.93908 3.57547 0.11851 3.47887 4 - -
31340 1.38629 1.38629 1.38629 1.38629
31341 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31342 5 3.07642 2.58739 3.12504 0.18065 5 - -
31343 1.38629 1.38629 1.38629 1.38629
31344 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31345 6 3.41917 0.13188 3.46922 2.81884 6 - -
31346 1.38629 1.38629 1.38629 1.38629
31347 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31348 7 3.07642 2.58739 3.12504 0.18065 7 - -
31349 1.38629 1.38629 1.38629 1.38629
31350 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31351 8 3.07642 2.58739 3.12504 0.18065 8 - -
31352 1.38629 1.38629 1.38629 1.38629
31353 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31354 9 0.14350 3.36817 2.79406 3.26870 9 - -
31355 1.38629 1.38629 1.38629 1.38629
31356 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31357 10 3.07642 2.58739 3.12504 0.18065 10 - -
31358 1.38629 1.38629 1.38629 1.38629
31359 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31360 11 3.41917 0.13188 3.46922 2.81884 11 - -
31361 1.38629 1.38629 1.38629 1.38629
31362 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31363 12 2.93908 3.57547 0.11851 3.47887 12 - -
31364 1.38629 1.38629 1.38629 1.38629
31365 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31366 13 2.93908 3.57547 0.11851 3.47887 13 - -
31367 1.38629 1.38629 1.38629 1.38629
31368 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31369 14 3.07642 2.58739 3.12504 0.18065 14 - -
31370 1.38629 1.38629 1.38629 1.38629
31371 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31372 15 2.93908 3.57547 0.11851 3.47887 15 - -
31373 1.38629 1.38629 1.38629 1.38629
31374 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31375 16 2.93908 3.57547 0.11851 3.47887 16 - -
31376 1.38629 1.38629 1.38629 1.38629
31377 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31378 17 0.14350 3.36817 2.79406 3.26870 17 - -
31379 1.38629 1.38629 1.38629 1.38629
31380 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31381 18 3.07642 2.58739 3.12504 0.18065 18 - -
31382 1.38629 1.38629 1.38629 1.38629
31383 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31384 19 3.41917 0.13188 3.46922 2.81884 19 - -
31385 1.38629 1.38629 1.38629 1.38629
31386 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31387 20 0.14350 3.36817 2.79406 3.26870 20 - -
31388 1.38629 1.38629 1.38629 1.38629
31389 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31390 21 3.41917 0.13188 3.46922 2.81884 21 - -
31391 1.38629 1.38629 1.38629 1.38629
31392 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31393 22 3.07642 2.58739 3.12504 0.18065 22 - -
31394 1.38629 1.38629 1.38629 1.38629
31395 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31396 23 3.41917 0.13188 3.46922 2.81884 23 - -
31397 1.38629 1.38629 1.38629 1.38629
31398 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31399 24 2.93908 3.57547 0.11851 3.47887 24 - -
31400 1.38629 1.38629 1.38629 1.38629
31401 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31402 25 2.93908 3.57547 0.11851 3.47887 25 - -
31403 1.38629 1.38629 1.38629 1.38629
31404 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31405 26 3.07642 2.58739 3.12504 0.18065 26 - -
31406 1.38629 1.38629 1.38629 1.38629
31407 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31408 27 3.07642 2.58739 3.12504 0.18065 27 - -
31409 1.38629 1.38629 1.38629 1.38629
31410 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31411 28 3.41917 0.13188 3.46922 2.81884 28 - -
31412 1.38629 1.38629 1.38629 1.38629
31413 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31414 29 0.14350 3.36817 2.79406 3.26870 29 - -
31415 1.38629 1.38629 1.38629 1.38629
31416 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31417 30 3.07642 2.58739 3.12504 0.18065 30 - -
31418 1.38629 1.38629 1.38629 1.38629
31419 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31420 31 0.14350 3.36817 2.79406 3.26870 31 - -
31421 1.38629 1.38629 1.38629 1.38629
31422 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31423 32 2.93908 3.57547 0.11851 3.47887 32 - -
31424 1.38629 1.38629 1.38629 1.38629
31425 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31426 33 0.14350 3.36817 2.79406 3.26870 33 - -
31427 1.38629 1.38629 1.38629 1.38629
31428 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31429 34 3.07642 2.58739 3.12504 0.18065 34 - -
31430 1.38629 1.38629 1.38629 1.38629
31431 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31432 35 3.41917 0.13188 3.46922 2.81884 35 - -
31433 1.38629 1.38629 1.38629 1.38629
31434 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31435 36 2.93908 3.57547 0.11851 3.47887 36 - -
31436 1.38629 1.38629 1.38629 1.38629
31437 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31438 37 0.14350 3.36817 2.79406 3.26870 37 - -
31439 1.38629 1.38629 1.38629 1.38629
31440 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31441 38 3.07642 2.58739 3.12504 0.18065 38 - -
31442 1.38629 1.38629 1.38629 1.38629
31443 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31444 39 2.93908 3.57547 0.11851 3.47887 39 - -
31445 1.38629 1.38629 1.38629 1.38629
31446 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31447 40 0.14350 3.36817 2.79406 3.26870 40 - -
31448 1.38629 1.38629 1.38629 1.38629
31449 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31450 41 0.14350 3.36817 2.79406 3.26870 41 - -
31451 1.38629 1.38629 1.38629 1.38629
31452 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31453 42 2.93908 3.57547 0.11851 3.47887 42 - -
31454 1.38629 1.38629 1.38629 1.38629
31455 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31456 43 0.14350 3.36817 2.79406 3.26870 43 - -
31457 1.38629 1.38629 1.38629 1.38629
31458 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31459 44 0.14350 3.36817 2.79406 3.26870 44 - -
31460 1.38629 1.38629 1.38629 1.38629
31461 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
31462 45 3.41917 0.13188 3.46922 2.81884 45 - -
31463 1.38629 1.38629 1.38629 1.38629
31464 0.01874 3.98623 * 1.46634 0.26236 0.00000 *
31465 //
31466 HMMER3/b [3.0 | March 2010]
31467 NAME 2_5.8_Metazoa_58S_start_threej_long
31468 LENG 45
31469 ALPH DNA
31470 RF no
31471 CS no
31472 MAP yes
31473 DATE Fri Feb 24 23:14:51 2012
31474 NSEQ 13
31475 EFFN 3.526123
31476 CKSUM 1276633975
31477 STATS LOCAL MSV -7.3728 0.71932
31478 STATS LOCAL VITERBI -7.7120 0.71932
31479 STATS LOCAL FORWARD -4.2838 0.71932
31480 HMM A C G T
31481 m->m m->i m->d i->m i->i d->m d->d
31482 COMPO 1.65970 1.42943 1.18428 1.33031
31483 1.38629 1.38629 1.38629 1.38629
31484 0.03555 4.04762 4.04762 1.46634 0.26236 0.00000 *
31485 1 2.45176 1.04716 2.52278 0.72838 1 - -
31486 1.38629 1.38629 1.38629 1.38629
31487 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31488 2 3.15264 2.63580 3.19832 0.16869 2 - -
31489 1.38629 1.38629 1.38629 1.38629
31490 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31491 3 0.13385 3.44324 2.84268 3.35093 3 - -
31492 1.38629 1.38629 1.38629 1.38629
31493 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31494 4 2.99096 3.65126 0.11044 3.56262 4 - -
31495 1.38629 1.38629 1.38629 1.38629
31496 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31497 5 3.15264 2.63580 3.19832 0.16869 5 - -
31498 1.38629 1.38629 1.38629 1.38629
31499 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31500 6 3.50552 0.12189 3.55185 2.88142 6 - -
31501 1.38629 1.38629 1.38629 1.38629
31502 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31503 7 3.15264 2.63580 3.19832 0.16869 7 - -
31504 1.38629 1.38629 1.38629 1.38629
31505 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31506 8 3.15264 2.63580 3.19832 0.16869 8 - -
31507 1.38629 1.38629 1.38629 1.38629
31508 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31509 9 2.06638 3.13182 0.24789 3.01044 9 - -
31510 1.38629 1.38629 1.38629 1.38629
31511 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31512 10 3.50552 0.12189 3.55185 2.88142 10 - -
31513 1.38629 1.38629 1.38629 1.38629
31514 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31515 11 3.50552 0.12189 3.55185 2.88142 11 - -
31516 1.38629 1.38629 1.38629 1.38629
31517 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31518 12 2.99096 3.65126 0.11044 3.56262 12 - -
31519 1.38629 1.38629 1.38629 1.38629
31520 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31521 13 2.99096 3.65126 0.11044 3.56262 13 - -
31522 1.38629 1.38629 1.38629 1.38629
31523 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31524 14 3.15264 2.63580 3.19832 0.16869 14 - -
31525 1.38629 1.38629 1.38629 1.38629
31526 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31527 15 2.99096 3.65126 0.11044 3.56262 15 - -
31528 1.38629 1.38629 1.38629 1.38629
31529 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31530 16 2.99096 3.65126 0.11044 3.56262 16 - -
31531 1.38629 1.38629 1.38629 1.38629
31532 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31533 17 0.13385 3.44324 2.84268 3.35093 17 - -
31534 1.38629 1.38629 1.38629 1.38629
31535 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31536 18 3.15264 2.63580 3.19832 0.16869 18 - -
31537 1.38629 1.38629 1.38629 1.38629
31538 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31539 19 3.50552 0.12189 3.55185 2.88142 19 - -
31540 1.38629 1.38629 1.38629 1.38629
31541 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31542 20 0.13385 3.44324 2.84268 3.35093 20 - -
31543 1.38629 1.38629 1.38629 1.38629
31544 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31545 21 3.50552 0.12189 3.55185 2.88142 21 - -
31546 1.38629 1.38629 1.38629 1.38629
31547 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31548 22 3.15264 2.63580 3.19832 0.16869 22 - -
31549 1.38629 1.38629 1.38629 1.38629
31550 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31551 23 3.50552 0.12189 3.55185 2.88142 23 - -
31552 1.38629 1.38629 1.38629 1.38629
31553 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31554 24 2.99096 3.65126 0.11044 3.56262 24 - -
31555 1.38629 1.38629 1.38629 1.38629
31556 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31557 25 2.99096 3.65126 0.11044 3.56262 25 - -
31558 1.38629 1.38629 1.38629 1.38629
31559 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31560 26 3.50552 0.12189 3.55185 2.88142 26 - -
31561 1.38629 1.38629 1.38629 1.38629
31562 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31563 27 3.15264 2.63580 3.19832 0.16869 27 - -
31564 1.38629 1.38629 1.38629 1.38629
31565 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31566 28 3.50552 0.12189 3.55185 2.88142 28 - -
31567 1.38629 1.38629 1.38629 1.38629
31568 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31569 29 2.99096 3.65126 0.11044 3.56262 29 - -
31570 1.38629 1.38629 1.38629 1.38629
31571 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31572 30 3.15264 2.63580 3.19832 0.16869 30 - -
31573 1.38629 1.38629 1.38629 1.38629
31574 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31575 31 0.60052 2.60773 1.22791 2.46665 31 - -
31576 1.38629 1.38629 1.38629 1.38629
31577 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31578 32 2.99096 3.65126 0.11044 3.56262 32 - -
31579 1.38629 1.38629 1.38629 1.38629
31580 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31581 33 2.99096 3.65126 0.11044 3.56262 33 - -
31582 1.38629 1.38629 1.38629 1.38629
31583 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31584 34 3.15264 2.63580 3.19832 0.16869 34 - -
31585 1.38629 1.38629 1.38629 1.38629
31586 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31587 35 3.50552 0.12189 3.55185 2.88142 35 - -
31588 1.38629 1.38629 1.38629 1.38629
31589 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31590 36 2.99096 3.65126 0.11044 3.56262 36 - -
31591 1.38629 1.38629 1.38629 1.38629
31592 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31593 37 0.13385 3.44324 2.84268 3.35093 37 - -
31594 1.38629 1.38629 1.38629 1.38629
31595 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31596 38 3.15264 2.63580 3.19832 0.16869 38 - -
31597 1.38629 1.38629 1.38629 1.38629
31598 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31599 39 2.99096 3.65126 0.11044 3.56262 39 - -
31600 1.38629 1.38629 1.38629 1.38629
31601 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31602 40 0.13385 3.44324 2.84268 3.35093 40 - -
31603 1.38629 1.38629 1.38629 1.38629
31604 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31605 41 0.13385 3.44324 2.84268 3.35093 41 - -
31606 1.38629 1.38629 1.38629 1.38629
31607 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31608 42 2.99096 3.65126 0.11044 3.56262 42 - -
31609 1.38629 1.38629 1.38629 1.38629
31610 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31611 43 0.13385 3.44324 2.84268 3.35093 43 - -
31612 1.38629 1.38629 1.38629 1.38629
31613 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31614 44 3.15264 2.63580 3.19832 0.16869 44 - -
31615 1.38629 1.38629 1.38629 1.38629
31616 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547
31617 45 3.50552 0.12189 3.55185 2.88142 45 - -
31618 1.38629 1.38629 1.38629 1.38629
31619 0.01793 4.03001 * 1.46634 0.26236 0.00000 *
31620 //
31621 HMMER3/b [3.0 | March 2010]
31622 NAME 2_5.8_Metazoa_58S_start_threek_long
31623 LENG 45
31624 ALPH DNA
31625 RF no
31626 CS no
31627 MAP yes
31628 DATE Fri Feb 24 23:15:00 2012
31629 NSEQ 7
31630 EFFN 3.236816
31631 CKSUM 408270587
31632 STATS LOCAL MSV -8.0805 0.71933
31633 STATS LOCAL VITERBI -7.6899 0.71933
31634 STATS LOCAL FORWARD -4.3059 0.71933
31635 HMM A C G T
31636 m->m m->i m->d i->m i->i d->m d->d
31637 COMPO 1.47561 1.38702 1.31668 1.37231
31638 1.38629 1.38629 1.38629 1.38629
31639 0.03748 3.99578 3.99578 1.46634 0.26236 0.00000 *
31640 1 3.40094 0.13411 3.45175 2.80552 1 - -
31641 1.38629 1.38629 1.38629 1.38629
31642 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31643 2 3.06055 2.57727 3.10977 0.18327 2 - -
31644 1.38629 1.38629 1.38629 1.38629
31645 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31646 3 0.14563 3.35238 2.78377 3.25141 3 - -
31647 1.38629 1.38629 1.38629 1.38629
31648 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31649 4 2.92797 3.55938 0.12031 3.46113 4 - -
31650 1.38629 1.38629 1.38629 1.38629
31651 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31652 5 3.40094 0.13411 3.45175 2.80552 5 - -
31653 1.38629 1.38629 1.38629 1.38629
31654 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31655 6 3.40094 0.13411 3.45175 2.80552 6 - -
31656 1.38629 1.38629 1.38629 1.38629
31657 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31658 7 3.06055 2.57727 3.10977 0.18327 7 - -
31659 1.38629 1.38629 1.38629 1.38629
31660 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31661 8 3.06055 2.57727 3.10977 0.18327 8 - -
31662 1.38629 1.38629 1.38629 1.38629
31663 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31664 9 0.14563 3.35238 2.78377 3.25141 9 - -
31665 1.38629 1.38629 1.38629 1.38629
31666 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31667 10 3.06055 2.57727 3.10977 0.18327 10 - -
31668 1.38629 1.38629 1.38629 1.38629
31669 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31670 11 3.40094 0.13411 3.45175 2.80552 11 - -
31671 1.38629 1.38629 1.38629 1.38629
31672 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31673 12 2.92797 3.55938 0.12031 3.46113 12 - -
31674 1.38629 1.38629 1.38629 1.38629
31675 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31676 13 2.92797 3.55938 0.12031 3.46113 13 - -
31677 1.38629 1.38629 1.38629 1.38629
31678 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31679 14 3.06055 2.57727 3.10977 0.18327 14 - -
31680 1.38629 1.38629 1.38629 1.38629
31681 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31682 15 2.92797 3.55938 0.12031 3.46113 15 - -
31683 1.38629 1.38629 1.38629 1.38629
31684 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31685 16 2.92797 3.55938 0.12031 3.46113 16 - -
31686 1.38629 1.38629 1.38629 1.38629
31687 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31688 17 0.14563 3.35238 2.78377 3.25141 17 - -
31689 1.38629 1.38629 1.38629 1.38629
31690 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31691 18 3.06055 2.57727 3.10977 0.18327 18 - -
31692 1.38629 1.38629 1.38629 1.38629
31693 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31694 19 3.40094 0.13411 3.45175 2.80552 19 - -
31695 1.38629 1.38629 1.38629 1.38629
31696 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31697 20 0.14563 3.35238 2.78377 3.25141 20 - -
31698 1.38629 1.38629 1.38629 1.38629
31699 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31700 21 3.40094 0.13411 3.45175 2.80552 21 - -
31701 1.38629 1.38629 1.38629 1.38629
31702 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31703 22 3.06055 2.57727 3.10977 0.18327 22 - -
31704 1.38629 1.38629 1.38629 1.38629
31705 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31706 23 3.40094 0.13411 3.45175 2.80552 23 - -
31707 1.38629 1.38629 1.38629 1.38629
31708 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31709 24 2.92797 3.55938 0.12031 3.46113 24 - -
31710 1.38629 1.38629 1.38629 1.38629
31711 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31712 25 2.92797 3.55938 0.12031 3.46113 25 - -
31713 1.38629 1.38629 1.38629 1.38629
31714 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31715 26 3.40094 0.13411 3.45175 2.80552 26 - -
31716 1.38629 1.38629 1.38629 1.38629
31717 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31718 27 3.06055 2.57727 3.10977 0.18327 27 - -
31719 1.38629 1.38629 1.38629 1.38629
31720 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31721 28 3.40094 0.13411 3.45175 2.80552 28 - -
31722 1.38629 1.38629 1.38629 1.38629
31723 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31724 29 2.92797 3.55938 0.12031 3.46113 29 - -
31725 1.38629 1.38629 1.38629 1.38629
31726 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31727 30 3.06055 2.57727 3.10977 0.18327 30 - -
31728 1.38629 1.38629 1.38629 1.38629
31729 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31730 31 0.14563 3.35238 2.78377 3.25141 31 - -
31731 1.38629 1.38629 1.38629 1.38629
31732 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31733 32 2.92797 3.55938 0.12031 3.46113 32 - -
31734 1.38629 1.38629 1.38629 1.38629
31735 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31736 33 3.06055 2.57727 3.10977 0.18327 33 - -
31737 1.38629 1.38629 1.38629 1.38629
31738 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31739 34 3.06055 2.57727 3.10977 0.18327 34 - -
31740 1.38629 1.38629 1.38629 1.38629
31741 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31742 35 3.40094 0.13411 3.45175 2.80552 35 - -
31743 1.38629 1.38629 1.38629 1.38629
31744 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31745 36 2.92797 3.55938 0.12031 3.46113 36 - -
31746 1.38629 1.38629 1.38629 1.38629
31747 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31748 37 0.14563 3.35238 2.78377 3.25141 37 - -
31749 1.38629 1.38629 1.38629 1.38629
31750 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31751 38 3.06055 2.57727 3.10977 0.18327 38 - -
31752 1.38629 1.38629 1.38629 1.38629
31753 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31754 39 2.92797 3.55938 0.12031 3.46113 39 - -
31755 1.38629 1.38629 1.38629 1.38629
31756 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31757 40 0.14563 3.35238 2.78377 3.25141 40 - -
31758 1.38629 1.38629 1.38629 1.38629
31759 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31760 41 0.14563 3.35238 2.78377 3.25141 41 - -
31761 1.38629 1.38629 1.38629 1.38629
31762 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31763 42 2.92797 3.55938 0.12031 3.46113 42 - -
31764 1.38629 1.38629 1.38629 1.38629
31765 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31766 43 0.14563 3.35238 2.78377 3.25141 43 - -
31767 1.38629 1.38629 1.38629 1.38629
31768 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31769 44 0.14563 3.35238 2.78377 3.25141 44 - -
31770 1.38629 1.38629 1.38629 1.38629
31771 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547
31772 45 3.40094 0.13411 3.45175 2.80552 45 - -
31773 1.38629 1.38629 1.38629 1.38629
31774 0.01892 3.97721 * 1.46634 0.26236 0.00000 *
31775 //
31776 HMMER3/b [3.0 | March 2010]
31777 NAME 2_5.8_Metazoa_58S_start_threel_long
31778 LENG 45
31779 ALPH DNA
31780 RF no
31781 CS no
31782 MAP yes
31783 DATE Fri Feb 24 23:15:05 2012
31784 NSEQ 25
31785 EFFN 4.135132
31786 CKSUM 2110423648
31787 STATS LOCAL MSV -6.6693 0.71932
31788 STATS LOCAL VITERBI -7.6515 0.71932
31789 STATS LOCAL FORWARD -4.2746 0.71932
31790 HMM A C G T
31791 m->m m->i m->d i->m i->i d->m d->d
31792 COMPO 1.45592 1.47226 1.24572 1.38760
31793 1.38629 1.38629 1.38629 1.38629
31794 0.03208 4.14870 4.14870 1.46634 0.26236 0.00000 *
31795 1 2.75651 1.52436 2.81926 0.41691 1 - -
31796 1.38629 1.38629 1.38629 1.38629
31797 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31798 2 2.63176 0.58501 2.70182 1.19117 2 - -
31799 1.38629 1.38629 1.38629 1.38629
31800 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31801 3 0.11510 3.60848 2.94886 3.53248 3 - -
31802 1.38629 1.38629 1.38629 1.38629
31803 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31804 4 2.65467 2.97644 0.26677 2.18167 4 - -
31805 1.38629 1.38629 1.38629 1.38629
31806 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31807 5 2.58086 1.11840 2.64957 0.64092 5 - -
31808 1.38629 1.38629 1.38629 1.38629
31809 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31810 6 3.69346 0.10301 3.73121 3.01519 6 - -
31811 1.38629 1.38629 1.38629 1.38629
31812 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31813 7 3.10767 2.20433 3.15658 0.22015 7 - -
31814 1.38629 1.38629 1.38629 1.38629
31815 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31816 8 3.32527 2.74533 3.36417 0.14477 8 - -
31817 1.38629 1.38629 1.38629 1.38629
31818 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31819 9 0.17998 3.25332 2.79731 2.73200 9 - -
31820 1.38629 1.38629 1.38629 1.38629
31821 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31822 10 2.70488 0.49385 2.77382 1.34543 10 - -
31823 1.38629 1.38629 1.38629 1.38629
31824 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31825 11 3.69346 0.10301 3.73121 3.01519 11 - -
31826 1.38629 1.38629 1.38629 1.38629
31827 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31828 12 3.10093 3.81394 0.09513 3.74311 12 - -
31829 1.38629 1.38629 1.38629 1.38629
31830 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31831 13 3.10093 3.81394 0.09513 3.74311 13 - -
31832 1.38629 1.38629 1.38629 1.38629
31833 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31834 14 3.32527 2.74533 3.36417 0.14477 14 - -
31835 1.38629 1.38629 1.38629 1.38629
31836 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31837 15 3.10093 3.81394 0.09513 3.74311 15 - -
31838 1.38629 1.38629 1.38629 1.38629
31839 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31840 16 3.10093 3.81394 0.09513 3.74311 16 - -
31841 1.38629 1.38629 1.38629 1.38629
31842 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31843 17 0.11510 3.60848 2.94886 3.53248 17 - -
31844 1.38629 1.38629 1.38629 1.38629
31845 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31846 18 3.32527 2.74533 3.36417 0.14477 18 - -
31847 1.38629 1.38629 1.38629 1.38629
31848 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31849 19 3.69346 0.10301 3.73121 3.01519 19 - -
31850 1.38629 1.38629 1.38629 1.38629
31851 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31852 20 0.11510 3.60848 2.94886 3.53248 20 - -
31853 1.38629 1.38629 1.38629 1.38629
31854 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31855 21 3.69346 0.10301 3.73121 3.01519 21 - -
31856 1.38629 1.38629 1.38629 1.38629
31857 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31858 22 3.32527 2.74533 3.36417 0.14477 22 - -
31859 1.38629 1.38629 1.38629 1.38629
31860 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31861 23 2.10833 0.30601 2.83467 2.48356 23 - -
31862 1.38629 1.38629 1.38629 1.38629
31863 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31864 24 3.10093 3.81394 0.09513 3.74311 24 - -
31865 1.38629 1.38629 1.38629 1.38629
31866 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31867 25 3.10093 3.81394 0.09513 3.74311 25 - -
31868 1.38629 1.38629 1.38629 1.38629
31869 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31870 26 2.65455 1.31607 2.72074 0.51809 26 - -
31871 1.38629 1.38629 1.38629 1.38629
31872 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31873 27 3.32527 2.74533 3.36417 0.14477 27 - -
31874 1.38629 1.38629 1.38629 1.38629
31875 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31876 28 3.69346 0.10301 3.73121 3.01519 28 - -
31877 1.38629 1.38629 1.38629 1.38629
31878 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31879 29 3.10093 3.81394 0.09513 3.74311 29 - -
31880 1.38629 1.38629 1.38629 1.38629
31881 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31882 30 3.32527 2.74533 3.36417 0.14477 30 - -
31883 1.38629 1.38629 1.38629 1.38629
31884 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31885 31 3.10093 3.81394 0.09513 3.74311 31 - -
31886 1.38629 1.38629 1.38629 1.38629
31887 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31888 32 3.10093 3.81394 0.09513 3.74311 32 - -
31889 1.38629 1.38629 1.38629 1.38629
31890 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31891 33 0.11510 3.60848 2.94886 3.53248 33 - -
31892 1.38629 1.38629 1.38629 1.38629
31893 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31894 34 3.32527 2.74533 3.36417 0.14477 34 - -
31895 1.38629 1.38629 1.38629 1.38629
31896 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31897 35 3.69346 0.10301 3.73121 3.01519 35 - -
31898 1.38629 1.38629 1.38629 1.38629
31899 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31900 36 3.10093 3.81394 0.09513 3.74311 36 - -
31901 1.38629 1.38629 1.38629 1.38629
31902 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31903 37 0.11510 3.60848 2.94886 3.53248 37 - -
31904 1.38629 1.38629 1.38629 1.38629
31905 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31906 38 3.32527 2.74533 3.36417 0.14477 38 - -
31907 1.38629 1.38629 1.38629 1.38629
31908 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31909 39 3.10093 3.81394 0.09513 3.74311 39 - -
31910 1.38629 1.38629 1.38629 1.38629
31911 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31912 40 0.11510 3.60848 2.94886 3.53248 40 - -
31913 1.38629 1.38629 1.38629 1.38629
31914 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31915 41 0.11510 3.60848 2.94886 3.53248 41 - -
31916 1.38629 1.38629 1.38629 1.38629
31917 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31918 42 3.10093 3.81394 0.09513 3.74311 42 - -
31919 1.38629 1.38629 1.38629 1.38629
31920 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31921 43 0.11510 3.60848 2.94886 3.53248 43 - -
31922 1.38629 1.38629 1.38629 1.38629
31923 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31924 44 0.11510 3.60848 2.94886 3.53248 44 - -
31925 1.38629 1.38629 1.38629 1.38629
31926 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547
31927 45 3.69346 0.10301 3.73121 3.01519 45 - -
31928 1.38629 1.38629 1.38629 1.38629
31929 0.01617 4.13278 * 1.46634 0.26236 0.00000 *
31930 //
31931 HMMER3/b [3.0 | March 2010]
31932 NAME 2_5.8_Metazoa_58S_start_twelve_long
31933 LENG 45
31934 ALPH DNA
31935 RF no
31936 CS no
31937 MAP yes
31938 DATE Fri Feb 24 23:22:32 2012
31939 NSEQ 7
31940 EFFN 3.168457
31941 CKSUM 1185329725
31942 STATS LOCAL MSV -8.1739 0.71932
31943 STATS LOCAL VITERBI -7.6654 0.71932
31944 STATS LOCAL FORWARD -4.0933 0.71932
31945 HMM A C G T
31946 m->m m->i m->d i->m i->i d->m d->d
31947 COMPO 1.54876 1.39734 1.14224 1.50899
31948 1.38629 1.38629 1.38629 1.38629
31949 0.03797 3.98313 3.98313 1.46634 0.26236 0.00000 *
31950 1 3.03775 2.56273 3.08783 0.18710 1 - -
31951 1.38629 1.38629 1.38629 1.38629
31952 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31953 2 3.03775 2.56273 3.08783 0.18710 2 - -
31954 1.38629 1.38629 1.38629 1.38629
31955 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31956 3 0.14877 3.32959 2.76888 3.22651 3 - -
31957 1.38629 1.38629 1.38629 1.38629
31958 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31959 4 3.37463 0.13741 3.42653 2.78623 4 - -
31960 1.38629 1.38629 1.38629 1.38629
31961 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31962 5 3.37463 0.13741 3.42653 2.78623 5 - -
31963 1.38629 1.38629 1.38629 1.38629
31964 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31965 6 3.37463 0.13741 3.42653 2.78623 6 - -
31966 1.38629 1.38629 1.38629 1.38629
31967 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31968 7 3.03775 2.56273 3.08783 0.18710 7 - -
31969 1.38629 1.38629 1.38629 1.38629
31970 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31971 8 2.91185 3.53609 0.12297 3.43546 8 - -
31972 1.38629 1.38629 1.38629 1.38629
31973 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31974 9 2.91185 3.53609 0.12297 3.43546 9 - -
31975 1.38629 1.38629 1.38629 1.38629
31976 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31977 10 0.14877 3.32959 2.76888 3.22651 10 - -
31978 1.38629 1.38629 1.38629 1.38629
31979 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31980 11 3.37463 0.13741 3.42653 2.78623 11 - -
31981 1.38629 1.38629 1.38629 1.38629
31982 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31983 12 2.91185 3.53609 0.12297 3.43546 12 - -
31984 1.38629 1.38629 1.38629 1.38629
31985 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31986 13 2.91185 3.53609 0.12297 3.43546 13 - -
31987 1.38629 1.38629 1.38629 1.38629
31988 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31989 14 3.03775 2.56273 3.08783 0.18710 14 - -
31990 1.38629 1.38629 1.38629 1.38629
31991 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31992 15 2.91185 3.53609 0.12297 3.43546 15 - -
31993 1.38629 1.38629 1.38629 1.38629
31994 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31995 16 2.91185 3.53609 0.12297 3.43546 16 - -
31996 1.38629 1.38629 1.38629 1.38629
31997 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
31998 17 0.14877 3.32959 2.76888 3.22651 17 - -
31999 1.38629 1.38629 1.38629 1.38629
32000 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32001 18 3.03775 2.56273 3.08783 0.18710 18 - -
32002 1.38629 1.38629 1.38629 1.38629
32003 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32004 19 3.37463 0.13741 3.42653 2.78623 19 - -
32005 1.38629 1.38629 1.38629 1.38629
32006 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32007 20 0.14877 3.32959 2.76888 3.22651 20 - -
32008 1.38629 1.38629 1.38629 1.38629
32009 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32010 21 3.37463 0.13741 3.42653 2.78623 21 - -
32011 1.38629 1.38629 1.38629 1.38629
32012 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32013 22 3.03775 2.56273 3.08783 0.18710 22 - -
32014 1.38629 1.38629 1.38629 1.38629
32015 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32016 23 3.03775 2.56273 3.08783 0.18710 23 - -
32017 1.38629 1.38629 1.38629 1.38629
32018 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32019 24 2.91185 3.53609 0.12297 3.43546 24 - -
32020 1.38629 1.38629 1.38629 1.38629
32021 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32022 25 2.91185 3.53609 0.12297 3.43546 25 - -
32023 1.38629 1.38629 1.38629 1.38629
32024 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32025 26 3.37463 0.13741 3.42653 2.78623 26 - -
32026 1.38629 1.38629 1.38629 1.38629
32027 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32028 27 3.03775 2.56273 3.08783 0.18710 27 - -
32029 1.38629 1.38629 1.38629 1.38629
32030 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32031 28 3.37463 0.13741 3.42653 2.78623 28 - -
32032 1.38629 1.38629 1.38629 1.38629
32033 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32034 29 2.91185 3.53609 0.12297 3.43546 29 - -
32035 1.38629 1.38629 1.38629 1.38629
32036 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32037 30 3.37463 0.13741 3.42653 2.78623 30 - -
32038 1.38629 1.38629 1.38629 1.38629
32039 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32040 31 2.91185 3.53609 0.12297 3.43546 31 - -
32041 1.38629 1.38629 1.38629 1.38629
32042 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32043 32 2.91185 3.53609 0.12297 3.43546 32 - -
32044 1.38629 1.38629 1.38629 1.38629
32045 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32046 33 2.91185 3.53609 0.12297 3.43546 33 - -
32047 1.38629 1.38629 1.38629 1.38629
32048 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32049 34 3.03775 2.56273 3.08783 0.18710 34 - -
32050 1.38629 1.38629 1.38629 1.38629
32051 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32052 35 3.37463 0.13741 3.42653 2.78623 35 - -
32053 1.38629 1.38629 1.38629 1.38629
32054 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32055 36 2.91185 3.53609 0.12297 3.43546 36 - -
32056 1.38629 1.38629 1.38629 1.38629
32057 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32058 37 0.14877 3.32959 2.76888 3.22651 37 - -
32059 1.38629 1.38629 1.38629 1.38629
32060 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32061 38 3.03775 2.56273 3.08783 0.18710 38 - -
32062 1.38629 1.38629 1.38629 1.38629
32063 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32064 39 2.91185 3.53609 0.12297 3.43546 39 - -
32065 1.38629 1.38629 1.38629 1.38629
32066 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32067 40 0.14877 3.32959 2.76888 3.22651 40 - -
32068 1.38629 1.38629 1.38629 1.38629
32069 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32070 41 0.14877 3.32959 2.76888 3.22651 41 - -
32071 1.38629 1.38629 1.38629 1.38629
32072 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32073 42 2.91185 3.53609 0.12297 3.43546 42 - -
32074 1.38629 1.38629 1.38629 1.38629
32075 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32076 43 0.14877 3.32959 2.76888 3.22651 43 - -
32077 1.38629 1.38629 1.38629 1.38629
32078 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32079 44 0.14877 3.32959 2.76888 3.22651 44 - -
32080 1.38629 1.38629 1.38629 1.38629
32081 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547
32082 45 3.37463 0.13741 3.42653 2.78623 45 - -
32083 1.38629 1.38629 1.38629 1.38629
32084 0.01916 3.96432 * 1.46634 0.26236 0.00000 *
32085 //
32086 HMMER3/b [3.0 | March 2010]
32087 NAME 2_5.8_Metazoa_58S_start_twenty_long
32088 LENG 45
32089 ALPH DNA
32090 RF no
32091 CS no
32092 MAP yes
32093 DATE Fri Feb 24 23:26:13 2012
32094 NSEQ 2
32095 EFFN 2.000000
32096 CKSUM 718889203
32097 STATS LOCAL MSV -7.4369 0.72883
32098 STATS LOCAL VITERBI -8.3333 0.72883
32099 STATS LOCAL FORWARD -3.3820 0.72883
32100 HMM A C G T
32101 m->m m->i m->d i->m i->i d->m d->d
32102 COMPO 1.43056 1.37707 1.25719 1.49587
32103 1.38629 1.38629 1.38629 1.38629
32104 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
32105 1 2.81865 0.23582 2.88868 2.35662 1 - -
32106 1.38629 1.38629 1.38629 1.38629
32107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32108 2 2.57915 2.25909 2.64442 0.28946 2 - -
32109 1.38629 1.38629 1.38629 1.38629
32110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32111 3 0.23862 2.84929 2.43386 2.70756 3 - -
32112 1.38629 1.38629 1.38629 1.38629
32113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32114 4 2.53331 3.02441 0.20344 2.88069 4 - -
32115 1.38629 1.38629 1.38629 1.38629
32116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32117 5 2.81865 0.23582 2.88868 2.35662 5 - -
32118 1.38629 1.38629 1.38629 1.38629
32119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32120 6 2.81865 0.23582 2.88868 2.35662 6 - -
32121 1.38629 1.38629 1.38629 1.38629
32122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32123 7 2.57915 2.25909 2.64442 0.28946 7 - -
32124 1.38629 1.38629 1.38629 1.38629
32125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32126 8 2.57915 2.25909 2.64442 0.28946 8 - -
32127 1.38629 1.38629 1.38629 1.38629
32128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32129 9 0.23862 2.84929 2.43386 2.70756 9 - -
32130 1.38629 1.38629 1.38629 1.38629
32131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32132 10 2.15554 1.00938 2.23102 0.88601 10 - -
32133 1.38629 1.38629 1.38629 1.38629
32134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32135 11 2.81865 0.23582 2.88868 2.35662 11 - -
32136 1.38629 1.38629 1.38629 1.38629
32137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32138 12 2.53331 3.02441 0.20344 2.88069 12 - -
32139 1.38629 1.38629 1.38629 1.38629
32140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32141 13 2.53331 3.02441 0.20344 2.88069 13 - -
32142 1.38629 1.38629 1.38629 1.38629
32143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32144 14 2.57915 2.25909 2.64442 0.28946 14 - -
32145 1.38629 1.38629 1.38629 1.38629
32146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32147 15 2.53331 3.02441 0.20344 2.88069 15 - -
32148 1.38629 1.38629 1.38629 1.38629
32149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32150 16 2.53331 3.02441 0.20344 2.88069 16 - -
32151 1.38629 1.38629 1.38629 1.38629
32152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32153 17 0.23862 2.84929 2.43386 2.70756 17 - -
32154 1.38629 1.38629 1.38629 1.38629
32155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32156 18 2.57915 2.25909 2.64442 0.28946 18 - -
32157 1.38629 1.38629 1.38629 1.38629
32158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32159 19 2.81865 0.23582 2.88868 2.35662 19 - -
32160 1.38629 1.38629 1.38629 1.38629
32161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32162 20 0.23862 2.84929 2.43386 2.70756 20 - -
32163 1.38629 1.38629 1.38629 1.38629
32164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32165 21 2.81865 0.23582 2.88868 2.35662 21 - -
32166 1.38629 1.38629 1.38629 1.38629
32167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32168 22 2.57915 2.25909 2.64442 0.28946 22 - -
32169 1.38629 1.38629 1.38629 1.38629
32170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32171 23 2.81865 0.23582 2.88868 2.35662 23 - -
32172 1.38629 1.38629 1.38629 1.38629
32173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32174 24 2.53331 3.02441 0.20344 2.88069 24 - -
32175 1.38629 1.38629 1.38629 1.38629
32176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32177 25 2.53331 3.02441 0.20344 2.88069 25 - -
32178 1.38629 1.38629 1.38629 1.38629
32179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32180 26 2.81865 0.23582 2.88868 2.35662 26 - -
32181 1.38629 1.38629 1.38629 1.38629
32182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32183 27 1.03732 1.95876 1.96551 1.00928 27 - -
32184 1.38629 1.38629 1.38629 1.38629
32185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32186 28 2.81865 0.23582 2.88868 2.35662 28 - -
32187 1.38629 1.38629 1.38629 1.38629
32188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32189 29 2.53331 3.02441 0.20344 2.88069 29 - -
32190 1.38629 1.38629 1.38629 1.38629
32191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32192 30 2.57915 2.25909 2.64442 0.28946 30 - -
32193 1.38629 1.38629 1.38629 1.38629
32194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32195 31 2.53331 3.02441 0.20344 2.88069 31 - -
32196 1.38629 1.38629 1.38629 1.38629
32197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32198 32 2.53331 3.02441 0.20344 2.88069 32 - -
32199 1.38629 1.38629 1.38629 1.38629
32200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32201 33 0.23862 2.84929 2.43386 2.70756 33 - -
32202 1.38629 1.38629 1.38629 1.38629
32203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32204 34 2.57915 2.25909 2.64442 0.28946 34 - -
32205 1.38629 1.38629 1.38629 1.38629
32206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32207 35 2.81865 0.23582 2.88868 2.35662 35 - -
32208 1.38629 1.38629 1.38629 1.38629
32209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32210 36 2.53331 3.02441 0.20344 2.88069 36 - -
32211 1.38629 1.38629 1.38629 1.38629
32212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32213 37 0.23862 2.84929 2.43386 2.70756 37 - -
32214 1.38629 1.38629 1.38629 1.38629
32215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32216 38 2.57915 2.25909 2.64442 0.28946 38 - -
32217 1.38629 1.38629 1.38629 1.38629
32218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32219 39 2.53331 3.02441 0.20344 2.88069 39 - -
32220 1.38629 1.38629 1.38629 1.38629
32221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32222 40 0.23862 2.84929 2.43386 2.70756 40 - -
32223 1.38629 1.38629 1.38629 1.38629
32224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32225 41 0.23862 2.84929 2.43386 2.70756 41 - -
32226 1.38629 1.38629 1.38629 1.38629
32227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32228 42 2.53331 3.02441 0.20344 2.88069 42 - -
32229 1.38629 1.38629 1.38629 1.38629
32230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32231 43 0.23862 2.84929 2.43386 2.70756 43 - -
32232 1.38629 1.38629 1.38629 1.38629
32233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32234 44 0.23862 2.84929 2.43386 2.70756 44 - -
32235 1.38629 1.38629 1.38629 1.38629
32236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32237 45 2.81865 0.23582 2.88868 2.35662 45 - -
32238 1.38629 1.38629 1.38629 1.38629
32239 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
32240 //
32241 HMMER3/b [3.0 | March 2010]
32242 NAME 2_5.8_Metazoa_58S_start_twentyeight_long
32243 LENG 45
32244 ALPH DNA
32245 RF no
32246 CS no
32247 MAP yes
32248 DATE Fri Feb 24 23:28:10 2012
32249 NSEQ 4
32250 EFFN 3.199219
32251 CKSUM 997121201
32252 STATS LOCAL MSV -8.1142 0.71933
32253 STATS LOCAL VITERBI -7.6231 0.71933
32254 STATS LOCAL FORWARD -4.2369 0.71933
32255 HMM A C G T
32256 m->m m->i m->d i->m i->i d->m d->d
32257 COMPO 1.21776 1.39643 1.37797 1.58700
32258 1.38629 1.38629 1.38629 1.38629
32259 0.03775 3.98884 3.98884 1.46634 0.26236 0.00000 *
32260 1 3.38655 0.13590 3.43796 2.79498 1 - -
32261 1.38629 1.38629 1.38629 1.38629
32262 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32263 2 0.14734 3.33991 2.77563 3.23778 2 - -
32264 1.38629 1.38629 1.38629 1.38629
32265 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32266 3 0.14734 3.33991 2.77563 3.23778 3 - -
32267 1.38629 1.38629 1.38629 1.38629
32268 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32269 4 3.38655 0.13590 3.43796 2.79498 4 - -
32270 1.38629 1.38629 1.38629 1.38629
32271 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32272 5 3.38655 0.13590 3.43796 2.79498 5 - -
32273 1.38629 1.38629 1.38629 1.38629
32274 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32275 6 0.14734 3.33991 2.77563 3.23778 6 - -
32276 1.38629 1.38629 1.38629 1.38629
32277 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32278 7 3.04806 2.56931 3.09775 0.18535 7 - -
32279 1.38629 1.38629 1.38629 1.38629
32280 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32281 8 2.91917 3.54665 0.12176 3.44709 8 - -
32282 1.38629 1.38629 1.38629 1.38629
32283 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32284 9 0.14734 3.33991 2.77563 3.23778 9 - -
32285 1.38629 1.38629 1.38629 1.38629
32286 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32287 10 0.14734 3.33991 2.77563 3.23778 10 - -
32288 1.38629 1.38629 1.38629 1.38629
32289 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32290 11 3.38655 0.13590 3.43796 2.79498 11 - -
32291 1.38629 1.38629 1.38629 1.38629
32292 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32293 12 0.14734 3.33991 2.77563 3.23778 12 - -
32294 1.38629 1.38629 1.38629 1.38629
32295 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32296 13 2.91917 3.54665 0.12176 3.44709 13 - -
32297 1.38629 1.38629 1.38629 1.38629
32298 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32299 14 3.04806 2.56931 3.09775 0.18535 14 - -
32300 1.38629 1.38629 1.38629 1.38629
32301 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32302 15 2.91917 3.54665 0.12176 3.44709 15 - -
32303 1.38629 1.38629 1.38629 1.38629
32304 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32305 16 2.91917 3.54665 0.12176 3.44709 16 - -
32306 1.38629 1.38629 1.38629 1.38629
32307 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32308 17 0.14734 3.33991 2.77563 3.23778 17 - -
32309 1.38629 1.38629 1.38629 1.38629
32310 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32311 18 3.04806 2.56931 3.09775 0.18535 18 - -
32312 1.38629 1.38629 1.38629 1.38629
32313 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32314 19 3.38655 0.13590 3.43796 2.79498 19 - -
32315 1.38629 1.38629 1.38629 1.38629
32316 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32317 20 0.14734 3.33991 2.77563 3.23778 20 - -
32318 1.38629 1.38629 1.38629 1.38629
32319 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32320 21 3.38655 0.13590 3.43796 2.79498 21 - -
32321 1.38629 1.38629 1.38629 1.38629
32322 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32323 22 3.04806 2.56931 3.09775 0.18535 22 - -
32324 1.38629 1.38629 1.38629 1.38629
32325 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32326 23 3.38655 0.13590 3.43796 2.79498 23 - -
32327 1.38629 1.38629 1.38629 1.38629
32328 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32329 24 2.91917 3.54665 0.12176 3.44709 24 - -
32330 1.38629 1.38629 1.38629 1.38629
32331 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32332 25 2.91917 3.54665 0.12176 3.44709 25 - -
32333 1.38629 1.38629 1.38629 1.38629
32334 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32335 26 3.38655 0.13590 3.43796 2.79498 26 - -
32336 1.38629 1.38629 1.38629 1.38629
32337 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32338 27 3.04806 2.56931 3.09775 0.18535 27 - -
32339 1.38629 1.38629 1.38629 1.38629
32340 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32341 28 3.38655 0.13590 3.43796 2.79498 28 - -
32342 1.38629 1.38629 1.38629 1.38629
32343 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32344 29 2.91917 3.54665 0.12176 3.44709 29 - -
32345 1.38629 1.38629 1.38629 1.38629
32346 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32347 30 3.04806 2.56931 3.09775 0.18535 30 - -
32348 1.38629 1.38629 1.38629 1.38629
32349 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32350 31 2.91917 3.54665 0.12176 3.44709 31 - -
32351 1.38629 1.38629 1.38629 1.38629
32352 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32353 32 3.04806 2.56931 3.09775 0.18535 32 - -
32354 1.38629 1.38629 1.38629 1.38629
32355 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32356 33 0.14734 3.33991 2.77563 3.23778 33 - -
32357 1.38629 1.38629 1.38629 1.38629
32358 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32359 34 3.04806 2.56931 3.09775 0.18535 34 - -
32360 1.38629 1.38629 1.38629 1.38629
32361 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32362 35 3.38655 0.13590 3.43796 2.79498 35 - -
32363 1.38629 1.38629 1.38629 1.38629
32364 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32365 36 2.91917 3.54665 0.12176 3.44709 36 - -
32366 1.38629 1.38629 1.38629 1.38629
32367 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32368 37 0.14734 3.33991 2.77563 3.23778 37 - -
32369 1.38629 1.38629 1.38629 1.38629
32370 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32371 38 3.04806 2.56931 3.09775 0.18535 38 - -
32372 1.38629 1.38629 1.38629 1.38629
32373 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32374 39 2.91917 3.54665 0.12176 3.44709 39 - -
32375 1.38629 1.38629 1.38629 1.38629
32376 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32377 40 0.14734 3.33991 2.77563 3.23778 40 - -
32378 1.38629 1.38629 1.38629 1.38629
32379 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32380 41 0.14734 3.33991 2.77563 3.23778 41 - -
32381 1.38629 1.38629 1.38629 1.38629
32382 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32383 42 2.91917 3.54665 0.12176 3.44709 42 - -
32384 1.38629 1.38629 1.38629 1.38629
32385 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32386 43 0.14734 3.33991 2.77563 3.23778 43 - -
32387 1.38629 1.38629 1.38629 1.38629
32388 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32389 44 0.14734 3.33991 2.77563 3.23778 44 - -
32390 1.38629 1.38629 1.38629 1.38629
32391 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547
32392 45 3.38655 0.13590 3.43796 2.79498 45 - -
32393 1.38629 1.38629 1.38629 1.38629
32394 0.01905 3.97014 * 1.46634 0.26236 0.00000 *
32395 //
32396 HMMER3/b [3.0 | March 2010]
32397 NAME 2_5.8_Metazoa_58S_start_twentyfive_long
32398 LENG 45
32399 ALPH DNA
32400 RF no
32401 CS no
32402 MAP yes
32403 DATE Fri Feb 24 23:26:58 2012
32404 NSEQ 7
32405 EFFN 3.257324
32406 CKSUM 2784065201
32407 STATS LOCAL MSV -8.1117 0.71933
32408 STATS LOCAL VITERBI -7.4429 0.71933
32409 STATS LOCAL FORWARD -4.2246 0.71933
32410 HMM A C G T
32411 m->m m->i m->d i->m i->i d->m d->d
32412 COMPO 1.33671 1.45799 1.38014 1.37419
32413 1.38629 1.38629 1.38629 1.38629
32414 0.03734 3.99954 3.99954 1.46634 0.26236 0.00000 *
32415 1 3.40872 0.13316 3.45920 2.81121 1 - -
32416 1.38629 1.38629 1.38629 1.38629
32417 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32418 2 0.14472 3.35911 2.78816 3.25878 2 - -
32419 1.38629 1.38629 1.38629 1.38629
32420 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32421 3 0.14472 3.35911 2.78816 3.25878 3 - -
32422 1.38629 1.38629 1.38629 1.38629
32423 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32424 4 3.40872 0.13316 3.45920 2.81121 4 - -
32425 1.38629 1.38629 1.38629 1.38629
32426 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32427 5 3.06731 2.58158 3.11627 0.18215 5 - -
32428 1.38629 1.38629 1.38629 1.38629
32429 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32430 6 3.06731 2.58158 3.11627 0.18215 6 - -
32431 1.38629 1.38629 1.38629 1.38629
32432 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32433 7 3.06731 2.58158 3.11627 0.18215 7 - -
32434 1.38629 1.38629 1.38629 1.38629
32435 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32436 8 3.06731 2.58158 3.11627 0.18215 8 - -
32437 1.38629 1.38629 1.38629 1.38629
32438 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32439 9 0.14472 3.35911 2.78816 3.25878 9 - -
32440 1.38629 1.38629 1.38629 1.38629
32441 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32442 10 0.14472 3.35911 2.78816 3.25878 10 - -
32443 1.38629 1.38629 1.38629 1.38629
32444 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32445 11 3.40872 0.13316 3.45920 2.81121 11 - -
32446 1.38629 1.38629 1.38629 1.38629
32447 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32448 12 2.93271 3.56625 0.11954 3.46869 12 - -
32449 1.38629 1.38629 1.38629 1.38629
32450 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32451 13 2.93271 3.56625 0.11954 3.46869 13 - -
32452 1.38629 1.38629 1.38629 1.38629
32453 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32454 14 3.06731 2.58158 3.11627 0.18215 14 - -
32455 1.38629 1.38629 1.38629 1.38629
32456 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32457 15 2.93271 3.56625 0.11954 3.46869 15 - -
32458 1.38629 1.38629 1.38629 1.38629
32459 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32460 16 2.93271 3.56625 0.11954 3.46869 16 - -
32461 1.38629 1.38629 1.38629 1.38629
32462 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32463 17 0.14472 3.35911 2.78816 3.25878 17 - -
32464 1.38629 1.38629 1.38629 1.38629
32465 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32466 18 3.06731 2.58158 3.11627 0.18215 18 - -
32467 1.38629 1.38629 1.38629 1.38629
32468 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32469 19 3.40872 0.13316 3.45920 2.81121 19 - -
32470 1.38629 1.38629 1.38629 1.38629
32471 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32472 20 3.06731 2.58158 3.11627 0.18215 20 - -
32473 1.38629 1.38629 1.38629 1.38629
32474 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32475 21 3.40872 0.13316 3.45920 2.81121 21 - -
32476 1.38629 1.38629 1.38629 1.38629
32477 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32478 22 3.06731 2.58158 3.11627 0.18215 22 - -
32479 1.38629 1.38629 1.38629 1.38629
32480 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32481 23 0.14472 3.35911 2.78816 3.25878 23 - -
32482 1.38629 1.38629 1.38629 1.38629
32483 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32484 24 2.93271 3.56625 0.11954 3.46869 24 - -
32485 1.38629 1.38629 1.38629 1.38629
32486 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32487 25 2.93271 3.56625 0.11954 3.46869 25 - -
32488 1.38629 1.38629 1.38629 1.38629
32489 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32490 26 3.40872 0.13316 3.45920 2.81121 26 - -
32491 1.38629 1.38629 1.38629 1.38629
32492 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32493 27 3.06731 2.58158 3.11627 0.18215 27 - -
32494 1.38629 1.38629 1.38629 1.38629
32495 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32496 28 3.40872 0.13316 3.45920 2.81121 28 - -
32497 1.38629 1.38629 1.38629 1.38629
32498 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32499 29 2.93271 3.56625 0.11954 3.46869 29 - -
32500 1.38629 1.38629 1.38629 1.38629
32501 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32502 30 3.40872 0.13316 3.45920 2.81121 30 - -
32503 1.38629 1.38629 1.38629 1.38629
32504 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32505 31 2.93271 3.56625 0.11954 3.46869 31 - -
32506 1.38629 1.38629 1.38629 1.38629
32507 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32508 32 3.06731 2.58158 3.11627 0.18215 32 - -
32509 1.38629 1.38629 1.38629 1.38629
32510 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32511 33 0.14472 3.35911 2.78816 3.25878 33 - -
32512 1.38629 1.38629 1.38629 1.38629
32513 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32514 34 3.06731 2.58158 3.11627 0.18215 34 - -
32515 1.38629 1.38629 1.38629 1.38629
32516 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32517 35 3.40872 0.13316 3.45920 2.81121 35 - -
32518 1.38629 1.38629 1.38629 1.38629
32519 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32520 36 2.93271 3.56625 0.11954 3.46869 36 - -
32521 1.38629 1.38629 1.38629 1.38629
32522 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32523 37 0.14472 3.35911 2.78816 3.25878 37 - -
32524 1.38629 1.38629 1.38629 1.38629
32525 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32526 38 3.06731 2.58158 3.11627 0.18215 38 - -
32527 1.38629 1.38629 1.38629 1.38629
32528 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32529 39 2.93271 3.56625 0.11954 3.46869 39 - -
32530 1.38629 1.38629 1.38629 1.38629
32531 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32532 40 0.14472 3.35911 2.78816 3.25878 40 - -
32533 1.38629 1.38629 1.38629 1.38629
32534 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32535 41 0.14472 3.35911 2.78816 3.25878 41 - -
32536 1.38629 1.38629 1.38629 1.38629
32537 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32538 42 2.93271 3.56625 0.11954 3.46869 42 - -
32539 1.38629 1.38629 1.38629 1.38629
32540 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32541 43 0.14472 3.35911 2.78816 3.25878 43 - -
32542 1.38629 1.38629 1.38629 1.38629
32543 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32544 44 0.14472 3.35911 2.78816 3.25878 44 - -
32545 1.38629 1.38629 1.38629 1.38629
32546 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
32547 45 3.40872 0.13316 3.45920 2.81121 45 - -
32548 1.38629 1.38629 1.38629 1.38629
32549 0.01884 3.98105 * 1.46634 0.26236 0.00000 *
32550 //
32551 HMMER3/b [3.0 | March 2010]
32552 NAME 2_5.8_Metazoa_58S_start_twentyfour_long
32553 LENG 45
32554 ALPH DNA
32555 RF no
32556 CS no
32557 MAP yes
32558 DATE Fri Feb 24 23:26:51 2012
32559 NSEQ 2
32560 EFFN 2.000000
32561 CKSUM 4071785967
32562 STATS LOCAL MSV -7.3852 0.72798
32563 STATS LOCAL VITERBI -8.0260 0.72798
32564 STATS LOCAL FORWARD -3.6008 0.72798
32565 HMM A C G T
32566 m->m m->i m->d i->m i->i d->m d->d
32567 COMPO 1.52069 1.33872 1.32202 1.37570
32568 1.38629 1.38629 1.38629 1.38629
32569 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
32570 1 2.81865 0.23582 2.88868 2.35662 1 - -
32571 1.38629 1.38629 1.38629 1.38629
32572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32573 2 0.23862 2.84929 2.43386 2.70756 2 - -
32574 1.38629 1.38629 1.38629 1.38629
32575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32576 3 0.23862 2.84929 2.43386 2.70756 3 - -
32577 1.38629 1.38629 1.38629 1.38629
32578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32579 4 2.81865 0.23582 2.88868 2.35662 4 - -
32580 1.38629 1.38629 1.38629 1.38629
32581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32582 5 2.57915 2.25909 2.64442 0.28946 5 - -
32583 1.38629 1.38629 1.38629 1.38629
32584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32585 6 2.57915 2.25909 2.64442 0.28946 6 - -
32586 1.38629 1.38629 1.38629 1.38629
32587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32588 7 2.81865 0.23582 2.88868 2.35662 7 - -
32589 1.38629 1.38629 1.38629 1.38629
32590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32591 8 2.57915 2.25909 2.64442 0.28946 8 - -
32592 1.38629 1.38629 1.38629 1.38629
32593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32594 9 0.23862 2.84929 2.43386 2.70756 9 - -
32595 1.38629 1.38629 1.38629 1.38629
32596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32597 10 0.23862 2.84929 2.43386 2.70756 10 - -
32598 1.38629 1.38629 1.38629 1.38629
32599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32600 11 2.81865 0.23582 2.88868 2.35662 11 - -
32601 1.38629 1.38629 1.38629 1.38629
32602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32603 12 2.53331 3.02441 0.20344 2.88069 12 - -
32604 1.38629 1.38629 1.38629 1.38629
32605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32606 13 2.53331 3.02441 0.20344 2.88069 13 - -
32607 1.38629 1.38629 1.38629 1.38629
32608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32609 14 2.57915 2.25909 2.64442 0.28946 14 - -
32610 1.38629 1.38629 1.38629 1.38629
32611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32612 15 2.53331 3.02441 0.20344 2.88069 15 - -
32613 1.38629 1.38629 1.38629 1.38629
32614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32615 16 2.53331 3.02441 0.20344 2.88069 16 - -
32616 1.38629 1.38629 1.38629 1.38629
32617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32618 17 0.23862 2.84929 2.43386 2.70756 17 - -
32619 1.38629 1.38629 1.38629 1.38629
32620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32621 18 2.57915 2.25909 2.64442 0.28946 18 - -
32622 1.38629 1.38629 1.38629 1.38629
32623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32624 19 2.81865 0.23582 2.88868 2.35662 19 - -
32625 1.38629 1.38629 1.38629 1.38629
32626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32627 20 2.57915 2.25909 2.64442 0.28946 20 - -
32628 1.38629 1.38629 1.38629 1.38629
32629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32630 21 2.81865 0.23582 2.88868 2.35662 21 - -
32631 1.38629 1.38629 1.38629 1.38629
32632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32633 22 2.57915 2.25909 2.64442 0.28946 22 - -
32634 1.38629 1.38629 1.38629 1.38629
32635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32636 23 2.81865 0.23582 2.88868 2.35662 23 - -
32637 1.38629 1.38629 1.38629 1.38629
32638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32639 24 2.53331 3.02441 0.20344 2.88069 24 - -
32640 1.38629 1.38629 1.38629 1.38629
32641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32642 25 2.53331 3.02441 0.20344 2.88069 25 - -
32643 1.38629 1.38629 1.38629 1.38629
32644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32645 26 2.81865 0.23582 2.88868 2.35662 26 - -
32646 1.38629 1.38629 1.38629 1.38629
32647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32648 27 2.57915 2.25909 2.64442 0.28946 27 - -
32649 1.38629 1.38629 1.38629 1.38629
32650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32651 28 2.81865 0.23582 2.88868 2.35662 28 - -
32652 1.38629 1.38629 1.38629 1.38629
32653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32654 29 2.53331 3.02441 0.20344 2.88069 29 - -
32655 1.38629 1.38629 1.38629 1.38629
32656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32657 30 2.57915 2.25909 2.64442 0.28946 30 - -
32658 1.38629 1.38629 1.38629 1.38629
32659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32660 31 2.53331 3.02441 0.20344 2.88069 31 - -
32661 1.38629 1.38629 1.38629 1.38629
32662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32663 32 2.57915 2.25909 2.64442 0.28946 32 - -
32664 1.38629 1.38629 1.38629 1.38629
32665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32666 33 2.53331 3.02441 0.20344 2.88069 33 - -
32667 1.38629 1.38629 1.38629 1.38629
32668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32669 34 2.57915 2.25909 2.64442 0.28946 34 - -
32670 1.38629 1.38629 1.38629 1.38629
32671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32672 35 2.81865 0.23582 2.88868 2.35662 35 - -
32673 1.38629 1.38629 1.38629 1.38629
32674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32675 36 2.53331 3.02441 0.20344 2.88069 36 - -
32676 1.38629 1.38629 1.38629 1.38629
32677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32678 37 0.23862 2.84929 2.43386 2.70756 37 - -
32679 1.38629 1.38629 1.38629 1.38629
32680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32681 38 2.57915 2.25909 2.64442 0.28946 38 - -
32682 1.38629 1.38629 1.38629 1.38629
32683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32684 39 2.53331 3.02441 0.20344 2.88069 39 - -
32685 1.38629 1.38629 1.38629 1.38629
32686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32687 40 0.23862 2.84929 2.43386 2.70756 40 - -
32688 1.38629 1.38629 1.38629 1.38629
32689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32690 41 2.81865 0.23582 2.88868 2.35662 41 - -
32691 1.38629 1.38629 1.38629 1.38629
32692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32693 42 2.53331 3.02441 0.20344 2.88069 42 - -
32694 1.38629 1.38629 1.38629 1.38629
32695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32696 43 0.23862 2.84929 2.43386 2.70756 43 - -
32697 1.38629 1.38629 1.38629 1.38629
32698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32699 44 0.23862 2.84929 2.43386 2.70756 44 - -
32700 1.38629 1.38629 1.38629 1.38629
32701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32702 45 2.81865 0.23582 2.88868 2.35662 45 - -
32703 1.38629 1.38629 1.38629 1.38629
32704 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
32705 //
32706 HMMER3/b [3.0 | March 2010]
32707 NAME 2_5.8_Metazoa_58S_start_twentynine_long
32708 LENG 45
32709 ALPH DNA
32710 RF no
32711 CS no
32712 MAP yes
32713 DATE Fri Feb 24 23:28:20 2012
32714 NSEQ 4
32715 EFFN 3.238281
32716 CKSUM 1537853273
32717 STATS LOCAL MSV -8.1019 0.71933
32718 STATS LOCAL VITERBI -7.6129 0.71933
32719 STATS LOCAL FORWARD -4.0493 0.71933
32720 HMM A C G T
32721 m->m m->i m->d i->m i->i d->m d->d
32722 COMPO 1.21502 1.62390 1.30909 1.44351
32723 1.38629 1.38629 1.38629 1.38629
32724 0.03747 3.99605 3.99605 1.46634 0.26236 0.00000 *
32725 1 3.06103 2.57758 3.11024 0.18319 1 - -
32726 1.38629 1.38629 1.38629 1.38629
32727 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32728 2 3.40150 0.13404 3.45229 2.80593 2 - -
32729 1.38629 1.38629 1.38629 1.38629
32730 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32731 3 0.14557 3.35286 2.78409 3.25194 3 - -
32732 1.38629 1.38629 1.38629 1.38629
32733 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32734 4 3.40150 0.13404 3.45229 2.80593 4 - -
32735 1.38629 1.38629 1.38629 1.38629
32736 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32737 5 0.14557 3.35286 2.78409 3.25194 5 - -
32738 1.38629 1.38629 1.38629 1.38629
32739 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32740 6 0.14557 3.35286 2.78409 3.25194 6 - -
32741 1.38629 1.38629 1.38629 1.38629
32742 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32743 7 3.06103 2.57758 3.11024 0.18319 7 - -
32744 1.38629 1.38629 1.38629 1.38629
32745 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32746 8 3.06103 2.57758 3.11024 0.18319 8 - -
32747 1.38629 1.38629 1.38629 1.38629
32748 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32749 9 0.14557 3.35286 2.78409 3.25194 9 - -
32750 1.38629 1.38629 1.38629 1.38629
32751 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32752 10 0.14557 3.35286 2.78409 3.25194 10 - -
32753 1.38629 1.38629 1.38629 1.38629
32754 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32755 11 3.40150 0.13404 3.45229 2.80593 11 - -
32756 1.38629 1.38629 1.38629 1.38629
32757 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32758 12 2.92831 3.55987 0.12026 3.46167 12 - -
32759 1.38629 1.38629 1.38629 1.38629
32760 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32761 13 2.92831 3.55987 0.12026 3.46167 13 - -
32762 1.38629 1.38629 1.38629 1.38629
32763 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32764 14 3.06103 2.57758 3.11024 0.18319 14 - -
32765 1.38629 1.38629 1.38629 1.38629
32766 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32767 15 2.92831 3.55987 0.12026 3.46167 15 - -
32768 1.38629 1.38629 1.38629 1.38629
32769 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32770 16 2.92831 3.55987 0.12026 3.46167 16 - -
32771 1.38629 1.38629 1.38629 1.38629
32772 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32773 17 0.14557 3.35286 2.78409 3.25194 17 - -
32774 1.38629 1.38629 1.38629 1.38629
32775 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32776 18 3.06103 2.57758 3.11024 0.18319 18 - -
32777 1.38629 1.38629 1.38629 1.38629
32778 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32779 19 3.40150 0.13404 3.45229 2.80593 19 - -
32780 1.38629 1.38629 1.38629 1.38629
32781 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32782 20 0.14557 3.35286 2.78409 3.25194 20 - -
32783 1.38629 1.38629 1.38629 1.38629
32784 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32785 21 3.40150 0.13404 3.45229 2.80593 21 - -
32786 1.38629 1.38629 1.38629 1.38629
32787 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32788 22 3.06103 2.57758 3.11024 0.18319 22 - -
32789 1.38629 1.38629 1.38629 1.38629
32790 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32791 23 3.06103 2.57758 3.11024 0.18319 23 - -
32792 1.38629 1.38629 1.38629 1.38629
32793 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32794 24 2.92831 3.55987 0.12026 3.46167 24 - -
32795 1.38629 1.38629 1.38629 1.38629
32796 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32797 25 2.92831 3.55987 0.12026 3.46167 25 - -
32798 1.38629 1.38629 1.38629 1.38629
32799 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32800 26 2.92831 3.55987 0.12026 3.46167 26 - -
32801 1.38629 1.38629 1.38629 1.38629
32802 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32803 27 3.06103 2.57758 3.11024 0.18319 27 - -
32804 1.38629 1.38629 1.38629 1.38629
32805 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32806 28 3.40150 0.13404 3.45229 2.80593 28 - -
32807 1.38629 1.38629 1.38629 1.38629
32808 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32809 29 2.92831 3.55987 0.12026 3.46167 29 - -
32810 1.38629 1.38629 1.38629 1.38629
32811 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32812 30 3.06103 2.57758 3.11024 0.18319 30 - -
32813 1.38629 1.38629 1.38629 1.38629
32814 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32815 31 0.14557 3.35286 2.78409 3.25194 31 - -
32816 1.38629 1.38629 1.38629 1.38629
32817 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32818 32 2.92831 3.55987 0.12026 3.46167 32 - -
32819 1.38629 1.38629 1.38629 1.38629
32820 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32821 33 0.14557 3.35286 2.78409 3.25194 33 - -
32822 1.38629 1.38629 1.38629 1.38629
32823 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32824 34 3.06103 2.57758 3.11024 0.18319 34 - -
32825 1.38629 1.38629 1.38629 1.38629
32826 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32827 35 3.40150 0.13404 3.45229 2.80593 35 - -
32828 1.38629 1.38629 1.38629 1.38629
32829 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32830 36 2.92831 3.55987 0.12026 3.46167 36 - -
32831 1.38629 1.38629 1.38629 1.38629
32832 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32833 37 0.14557 3.35286 2.78409 3.25194 37 - -
32834 1.38629 1.38629 1.38629 1.38629
32835 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32836 38 3.06103 2.57758 3.11024 0.18319 38 - -
32837 1.38629 1.38629 1.38629 1.38629
32838 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32839 39 2.92831 3.55987 0.12026 3.46167 39 - -
32840 1.38629 1.38629 1.38629 1.38629
32841 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32842 40 0.14557 3.35286 2.78409 3.25194 40 - -
32843 1.38629 1.38629 1.38629 1.38629
32844 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32845 41 0.14557 3.35286 2.78409 3.25194 41 - -
32846 1.38629 1.38629 1.38629 1.38629
32847 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32848 42 2.92831 3.55987 0.12026 3.46167 42 - -
32849 1.38629 1.38629 1.38629 1.38629
32850 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32851 43 0.14557 3.35286 2.78409 3.25194 43 - -
32852 1.38629 1.38629 1.38629 1.38629
32853 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32854 44 0.14557 3.35286 2.78409 3.25194 44 - -
32855 1.38629 1.38629 1.38629 1.38629
32856 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
32857 45 3.40150 0.13404 3.45229 2.80593 45 - -
32858 1.38629 1.38629 1.38629 1.38629
32859 0.01891 3.97749 * 1.46634 0.26236 0.00000 *
32860 //
32861 HMMER3/b [3.0 | March 2010]
32862 NAME 2_5.8_Metazoa_58S_start_twentyone_long
32863 LENG 45
32864 ALPH DNA
32865 RF no
32866 CS no
32867 MAP yes
32868 DATE Fri Feb 24 23:26:19 2012
32869 NSEQ 3
32870 EFFN 3.000000
32871 CKSUM 2207381587
32872 STATS LOCAL MSV -7.9442 0.71991
32873 STATS LOCAL VITERBI -7.7532 0.71991
32874 STATS LOCAL FORWARD -3.8730 0.71991
32875 HMM A C G T
32876 m->m m->i m->d i->m i->i d->m d->d
32877 COMPO 1.54730 1.33345 1.14506 1.58275
32878 1.38629 1.38629 1.38629 1.38629
32879 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
32880 1 3.30705 0.14631 3.36166 2.73626 1 - -
32881 1.38629 1.38629 1.38629 1.38629
32882 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32883 2 2.97980 2.52563 3.03204 0.19727 2 - -
32884 1.38629 1.38629 1.38629 1.38629
32885 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32886 3 0.15719 3.27118 2.73043 3.16274 3 - -
32887 1.38629 1.38629 1.38629 1.38629
32888 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32889 4 3.30705 0.14631 3.36166 2.73626 4 - -
32890 1.38629 1.38629 1.38629 1.38629
32891 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32892 5 2.97980 2.52563 3.03204 0.19727 5 - -
32893 1.38629 1.38629 1.38629 1.38629
32894 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32895 6 2.86982 3.47591 0.13017 3.36931 6 - -
32896 1.38629 1.38629 1.38629 1.38629
32897 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32898 7 3.30705 0.14631 3.36166 2.73626 7 - -
32899 1.38629 1.38629 1.38629 1.38629
32900 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32901 8 3.30705 0.14631 3.36166 2.73626 8 - -
32902 1.38629 1.38629 1.38629 1.38629
32903 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32904 9 0.15719 3.27118 2.73043 3.16274 9 - -
32905 1.38629 1.38629 1.38629 1.38629
32906 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32907 10 2.86982 3.47591 0.13017 3.36931 10 - -
32908 1.38629 1.38629 1.38629 1.38629
32909 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32910 11 2.97980 2.52563 3.03204 0.19727 11 - -
32911 1.38629 1.38629 1.38629 1.38629
32912 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32913 12 2.86982 3.47591 0.13017 3.36931 12 - -
32914 1.38629 1.38629 1.38629 1.38629
32915 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32916 13 2.86982 3.47591 0.13017 3.36931 13 - -
32917 1.38629 1.38629 1.38629 1.38629
32918 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32919 14 2.97980 2.52563 3.03204 0.19727 14 - -
32920 1.38629 1.38629 1.38629 1.38629
32921 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32922 15 2.86982 3.47591 0.13017 3.36931 15 - -
32923 1.38629 1.38629 1.38629 1.38629
32924 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32925 16 2.86982 3.47591 0.13017 3.36931 16 - -
32926 1.38629 1.38629 1.38629 1.38629
32927 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32928 17 0.15719 3.27118 2.73043 3.16274 17 - -
32929 1.38629 1.38629 1.38629 1.38629
32930 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32931 18 2.97980 2.52563 3.03204 0.19727 18 - -
32932 1.38629 1.38629 1.38629 1.38629
32933 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32934 19 3.30705 0.14631 3.36166 2.73626 19 - -
32935 1.38629 1.38629 1.38629 1.38629
32936 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32937 20 0.15719 3.27118 2.73043 3.16274 20 - -
32938 1.38629 1.38629 1.38629 1.38629
32939 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32940 21 3.30705 0.14631 3.36166 2.73626 21 - -
32941 1.38629 1.38629 1.38629 1.38629
32942 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32943 22 2.97980 2.52563 3.03204 0.19727 22 - -
32944 1.38629 1.38629 1.38629 1.38629
32945 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32946 23 3.30705 0.14631 3.36166 2.73626 23 - -
32947 1.38629 1.38629 1.38629 1.38629
32948 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32949 24 2.86982 3.47591 0.13017 3.36931 24 - -
32950 1.38629 1.38629 1.38629 1.38629
32951 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32952 25 2.86982 3.47591 0.13017 3.36931 25 - -
32953 1.38629 1.38629 1.38629 1.38629
32954 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32955 26 3.30705 0.14631 3.36166 2.73626 26 - -
32956 1.38629 1.38629 1.38629 1.38629
32957 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32958 27 2.97980 2.52563 3.03204 0.19727 27 - -
32959 1.38629 1.38629 1.38629 1.38629
32960 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32961 28 3.30705 0.14631 3.36166 2.73626 28 - -
32962 1.38629 1.38629 1.38629 1.38629
32963 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32964 29 2.86982 3.47591 0.13017 3.36931 29 - -
32965 1.38629 1.38629 1.38629 1.38629
32966 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32967 30 3.30705 0.14631 3.36166 2.73626 30 - -
32968 1.38629 1.38629 1.38629 1.38629
32969 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32970 31 2.97980 2.52563 3.03204 0.19727 31 - -
32971 1.38629 1.38629 1.38629 1.38629
32972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32973 32 2.86982 3.47591 0.13017 3.36931 32 - -
32974 1.38629 1.38629 1.38629 1.38629
32975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32976 33 2.86982 3.47591 0.13017 3.36931 33 - -
32977 1.38629 1.38629 1.38629 1.38629
32978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32979 34 2.97980 2.52563 3.03204 0.19727 34 - -
32980 1.38629 1.38629 1.38629 1.38629
32981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32982 35 3.30705 0.14631 3.36166 2.73626 35 - -
32983 1.38629 1.38629 1.38629 1.38629
32984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32985 36 2.86982 3.47591 0.13017 3.36931 36 - -
32986 1.38629 1.38629 1.38629 1.38629
32987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32988 37 0.15719 3.27118 2.73043 3.16274 37 - -
32989 1.38629 1.38629 1.38629 1.38629
32990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32991 38 2.86982 3.47591 0.13017 3.36931 38 - -
32992 1.38629 1.38629 1.38629 1.38629
32993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32994 39 2.86982 3.47591 0.13017 3.36931 39 - -
32995 1.38629 1.38629 1.38629 1.38629
32996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32997 40 0.15719 3.27118 2.73043 3.16274 40 - -
32998 1.38629 1.38629 1.38629 1.38629
32999 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
33000 41 0.15719 3.27118 2.73043 3.16274 41 - -
33001 1.38629 1.38629 1.38629 1.38629
33002 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
33003 42 2.86982 3.47591 0.13017 3.36931 42 - -
33004 1.38629 1.38629 1.38629 1.38629
33005 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
33006 43 0.15719 3.27118 2.73043 3.16274 43 - -
33007 1.38629 1.38629 1.38629 1.38629
33008 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
33009 44 0.15719 3.27118 2.73043 3.16274 44 - -
33010 1.38629 1.38629 1.38629 1.38629
33011 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
33012 45 3.30705 0.14631 3.36166 2.73626 45 - -
33013 1.38629 1.38629 1.38629 1.38629
33014 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
33015 //
33016 HMMER3/b [3.0 | March 2010]
33017 NAME 2_5.8_Metazoa_58S_start_twentysevena_long
33018 LENG 45
33019 ALPH DNA
33020 RF no
33021 CS no
33022 MAP yes
33023 DATE Fri Feb 24 23:27:19 2012
33024 NSEQ 44
33025 EFFN 3.316650
33026 CKSUM 3195064440
33027 STATS LOCAL MSV -8.1963 0.71932
33028 STATS LOCAL VITERBI -7.7078 0.71932
33029 STATS LOCAL FORWARD -4.2345 0.71932
33030 HMM A C G T
33031 m->m m->i m->d i->m i->i d->m d->d
33032 COMPO 1.42255 1.20259 1.37985 1.57568
33033 1.38629 1.38629 1.38629 1.38629
33034 0.03693 4.01036 4.01036 1.46634 0.26236 0.00000 *
33035 1 3.43088 0.13047 3.48043 2.82738 1 - -
33036 1.38629 1.38629 1.38629 1.38629
33037 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33038 2 0.14215 3.37833 2.80067 3.27981 2 - -
33039 1.38629 1.38629 1.38629 1.38629
33040 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33041 3 0.14215 3.37833 2.80067 3.27981 3 - -
33042 1.38629 1.38629 1.38629 1.38629
33043 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33044 4 3.43088 0.13047 3.48043 2.82738 4 - -
33045 1.38629 1.38629 1.38629 1.38629
33046 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33047 5 3.08666 2.59390 3.13489 0.17899 5 - -
33048 1.38629 1.38629 1.38629 1.38629
33049 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33050 6 3.08666 2.59390 3.13489 0.17899 6 - -
33051 1.38629 1.38629 1.38629 1.38629
33052 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33053 7 3.43088 0.13047 3.48043 2.82738 7 - -
33054 1.38629 1.38629 1.38629 1.38629
33055 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33056 8 3.08666 2.59390 3.13489 0.17899 8 - -
33057 1.38629 1.38629 1.38629 1.38629
33058 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33059 9 0.14215 3.37833 2.80067 3.27981 9 - -
33060 1.38629 1.38629 1.38629 1.38629
33061 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33062 10 0.14215 3.37833 2.80067 3.27981 10 - -
33063 1.38629 1.38629 1.38629 1.38629
33064 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33065 11 3.43088 0.13047 3.48043 2.82738 11 - -
33066 1.38629 1.38629 1.38629 1.38629
33067 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33068 12 2.94618 3.58579 0.11737 3.49026 12 - -
33069 1.38629 1.38629 1.38629 1.38629
33070 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33071 13 2.94618 3.58579 0.11737 3.49026 13 - -
33072 1.38629 1.38629 1.38629 1.38629
33073 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33074 14 3.08666 2.59390 3.13489 0.17899 14 - -
33075 1.38629 1.38629 1.38629 1.38629
33076 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33077 15 2.94618 3.58579 0.11737 3.49026 15 - -
33078 1.38629 1.38629 1.38629 1.38629
33079 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33080 16 2.94618 3.58579 0.11737 3.49026 16 - -
33081 1.38629 1.38629 1.38629 1.38629
33082 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33083 17 0.14215 3.37833 2.80067 3.27981 17 - -
33084 1.38629 1.38629 1.38629 1.38629
33085 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33086 18 3.43088 0.13047 3.48043 2.82738 18 - -
33087 1.38629 1.38629 1.38629 1.38629
33088 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33089 19 3.43088 0.13047 3.48043 2.82738 19 - -
33090 1.38629 1.38629 1.38629 1.38629
33091 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33092 20 3.43088 0.13047 3.48043 2.82738 20 - -
33093 1.38629 1.38629 1.38629 1.38629
33094 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33095 21 3.43088 0.13047 3.48043 2.82738 21 - -
33096 1.38629 1.38629 1.38629 1.38629
33097 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33098 22 3.08666 2.59390 3.13489 0.17899 22 - -
33099 1.38629 1.38629 1.38629 1.38629
33100 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33101 23 3.43088 0.13047 3.48043 2.82738 23 - -
33102 1.38629 1.38629 1.38629 1.38629
33103 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33104 24 2.94618 3.58579 0.11737 3.49026 24 - -
33105 1.38629 1.38629 1.38629 1.38629
33106 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33107 25 2.94618 3.58579 0.11737 3.49026 25 - -
33108 1.38629 1.38629 1.38629 1.38629
33109 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33110 26 3.43088 0.13047 3.48043 2.82738 26 - -
33111 1.38629 1.38629 1.38629 1.38629
33112 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33113 27 3.08666 2.59390 3.13489 0.17899 27 - -
33114 1.38629 1.38629 1.38629 1.38629
33115 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33116 28 3.43088 0.13047 3.48043 2.82738 28 - -
33117 1.38629 1.38629 1.38629 1.38629
33118 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33119 29 2.23374 3.19285 0.21615 3.07464 29 - -
33120 1.38629 1.38629 1.38629 1.38629
33121 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33122 30 3.08666 2.59390 3.13489 0.17899 30 - -
33123 1.38629 1.38629 1.38629 1.38629
33124 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33125 31 2.94618 3.58579 0.11737 3.49026 31 - -
33126 1.38629 1.38629 1.38629 1.38629
33127 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33128 32 3.43088 0.13047 3.48043 2.82738 32 - -
33129 1.38629 1.38629 1.38629 1.38629
33130 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33131 33 0.45634 2.68837 1.51211 2.55144 33 - -
33132 1.38629 1.38629 1.38629 1.38629
33133 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33134 34 3.08666 2.59390 3.13489 0.17899 34 - -
33135 1.38629 1.38629 1.38629 1.38629
33136 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33137 35 3.43088 0.13047 3.48043 2.82738 35 - -
33138 1.38629 1.38629 1.38629 1.38629
33139 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33140 36 2.94618 3.58579 0.11737 3.49026 36 - -
33141 1.38629 1.38629 1.38629 1.38629
33142 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33143 37 0.14215 3.37833 2.80067 3.27981 37 - -
33144 1.38629 1.38629 1.38629 1.38629
33145 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33146 38 3.08666 2.59390 3.13489 0.17899 38 - -
33147 1.38629 1.38629 1.38629 1.38629
33148 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33149 39 2.94618 3.58579 0.11737 3.49026 39 - -
33150 1.38629 1.38629 1.38629 1.38629
33151 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33152 40 0.14215 3.37833 2.80067 3.27981 40 - -
33153 1.38629 1.38629 1.38629 1.38629
33154 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33155 41 0.14215 3.37833 2.80067 3.27981 41 - -
33156 1.38629 1.38629 1.38629 1.38629
33157 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33158 42 2.94618 3.58579 0.11737 3.49026 42 - -
33159 1.38629 1.38629 1.38629 1.38629
33160 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33161 43 0.14215 3.37833 2.80067 3.27981 43 - -
33162 1.38629 1.38629 1.38629 1.38629
33163 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33164 44 0.14215 3.37833 2.80067 3.27981 44 - -
33165 1.38629 1.38629 1.38629 1.38629
33166 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547
33167 45 3.43088 0.13047 3.48043 2.82738 45 - -
33168 1.38629 1.38629 1.38629 1.38629
33169 0.01863 3.99206 * 1.46634 0.26236 0.00000 *
33170 //
33171 HMMER3/b [3.0 | March 2010]
33172 NAME 2_5.8_Metazoa_58S_start_twentysevenb_long
33173 LENG 45
33174 ALPH DNA
33175 RF no
33176 CS no
33177 MAP yes
33178 DATE Fri Feb 24 23:27:24 2012
33179 NSEQ 5
33180 EFFN 3.178711
33181 CKSUM 557866279
33182 STATS LOCAL MSV -8.2628 0.71932
33183 STATS LOCAL VITERBI -7.7354 0.71932
33184 STATS LOCAL FORWARD -4.3627 0.71932
33185 HMM A C G T
33186 m->m m->i m->d i->m i->i d->m d->d
33187 COMPO 1.40535 1.26751 1.31792 1.58234
33188 1.38629 1.38629 1.38629 1.38629
33189 0.03789 3.98503 3.98503 1.46634 0.26236 0.00000 *
33190 1 3.37862 0.13690 3.43035 2.78916 1 - -
33191 1.38629 1.38629 1.38629 1.38629
33192 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33193 2 0.14829 3.33304 2.77114 3.23028 2 - -
33194 1.38629 1.38629 1.38629 1.38629
33195 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33196 3 0.14829 3.33304 2.77114 3.23028 3 - -
33197 1.38629 1.38629 1.38629 1.38629
33198 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33199 4 3.37862 0.13690 3.43035 2.78916 4 - -
33200 1.38629 1.38629 1.38629 1.38629
33201 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33202 5 3.04119 2.56493 3.09115 0.18651 5 - -
33203 1.38629 1.38629 1.38629 1.38629
33204 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33205 6 3.04119 2.56493 3.09115 0.18651 6 - -
33206 1.38629 1.38629 1.38629 1.38629
33207 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33208 7 3.37862 0.13690 3.43035 2.78916 7 - -
33209 1.38629 1.38629 1.38629 1.38629
33210 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33211 8 3.04119 2.56493 3.09115 0.18651 8 - -
33212 1.38629 1.38629 1.38629 1.38629
33213 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33214 9 0.14829 3.33304 2.77114 3.23028 9 - -
33215 1.38629 1.38629 1.38629 1.38629
33216 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33217 10 0.14829 3.33304 2.77114 3.23028 10 - -
33218 1.38629 1.38629 1.38629 1.38629
33219 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33220 11 3.37862 0.13690 3.43035 2.78916 11 - -
33221 1.38629 1.38629 1.38629 1.38629
33222 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33223 12 2.91430 3.53962 0.12257 3.43936 12 - -
33224 1.38629 1.38629 1.38629 1.38629
33225 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33226 13 2.91430 3.53962 0.12257 3.43936 13 - -
33227 1.38629 1.38629 1.38629 1.38629
33228 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33229 14 3.04119 2.56493 3.09115 0.18651 14 - -
33230 1.38629 1.38629 1.38629 1.38629
33231 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33232 15 2.91430 3.53962 0.12257 3.43936 15 - -
33233 1.38629 1.38629 1.38629 1.38629
33234 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33235 16 2.91430 3.53962 0.12257 3.43936 16 - -
33236 1.38629 1.38629 1.38629 1.38629
33237 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33238 17 0.14829 3.33304 2.77114 3.23028 17 - -
33239 1.38629 1.38629 1.38629 1.38629
33240 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33241 18 3.37862 0.13690 3.43035 2.78916 18 - -
33242 1.38629 1.38629 1.38629 1.38629
33243 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33244 19 0.14829 3.33304 2.77114 3.23028 19 - -
33245 1.38629 1.38629 1.38629 1.38629
33246 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33247 20 3.37862 0.13690 3.43035 2.78916 20 - -
33248 1.38629 1.38629 1.38629 1.38629
33249 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33250 21 3.37862 0.13690 3.43035 2.78916 21 - -
33251 1.38629 1.38629 1.38629 1.38629
33252 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33253 22 3.04119 2.56493 3.09115 0.18651 22 - -
33254 1.38629 1.38629 1.38629 1.38629
33255 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33256 23 3.37862 0.13690 3.43035 2.78916 23 - -
33257 1.38629 1.38629 1.38629 1.38629
33258 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33259 24 2.91430 3.53962 0.12257 3.43936 24 - -
33260 1.38629 1.38629 1.38629 1.38629
33261 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33262 25 2.91430 3.53962 0.12257 3.43936 25 - -
33263 1.38629 1.38629 1.38629 1.38629
33264 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33265 26 3.37862 0.13690 3.43035 2.78916 26 - -
33266 1.38629 1.38629 1.38629 1.38629
33267 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33268 27 3.04119 2.56493 3.09115 0.18651 27 - -
33269 1.38629 1.38629 1.38629 1.38629
33270 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33271 28 3.37862 0.13690 3.43035 2.78916 28 - -
33272 1.38629 1.38629 1.38629 1.38629
33273 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33274 29 2.91430 3.53962 0.12257 3.43936 29 - -
33275 1.38629 1.38629 1.38629 1.38629
33276 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33277 30 3.04119 2.56493 3.09115 0.18651 30 - -
33278 1.38629 1.38629 1.38629 1.38629
33279 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33280 31 2.91430 3.53962 0.12257 3.43936 31 - -
33281 1.38629 1.38629 1.38629 1.38629
33282 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33283 32 3.04119 2.56493 3.09115 0.18651 32 - -
33284 1.38629 1.38629 1.38629 1.38629
33285 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33286 33 0.14829 3.33304 2.77114 3.23028 33 - -
33287 1.38629 1.38629 1.38629 1.38629
33288 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33289 34 3.37862 0.13690 3.43035 2.78916 34 - -
33290 1.38629 1.38629 1.38629 1.38629
33291 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33292 35 3.37862 0.13690 3.43035 2.78916 35 - -
33293 1.38629 1.38629 1.38629 1.38629
33294 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33295 36 2.91430 3.53962 0.12257 3.43936 36 - -
33296 1.38629 1.38629 1.38629 1.38629
33297 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33298 37 0.14829 3.33304 2.77114 3.23028 37 - -
33299 1.38629 1.38629 1.38629 1.38629
33300 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33301 38 3.04119 2.56493 3.09115 0.18651 38 - -
33302 1.38629 1.38629 1.38629 1.38629
33303 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33304 39 2.91430 3.53962 0.12257 3.43936 39 - -
33305 1.38629 1.38629 1.38629 1.38629
33306 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33307 40 0.14829 3.33304 2.77114 3.23028 40 - -
33308 1.38629 1.38629 1.38629 1.38629
33309 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33310 41 0.14829 3.33304 2.77114 3.23028 41 - -
33311 1.38629 1.38629 1.38629 1.38629
33312 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33313 42 2.91430 3.53962 0.12257 3.43936 42 - -
33314 1.38629 1.38629 1.38629 1.38629
33315 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33316 43 0.14829 3.33304 2.77114 3.23028 43 - -
33317 1.38629 1.38629 1.38629 1.38629
33318 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33319 44 2.91430 3.53962 0.12257 3.43936 44 - -
33320 1.38629 1.38629 1.38629 1.38629
33321 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
33322 45 3.37862 0.13690 3.43035 2.78916 45 - -
33323 1.38629 1.38629 1.38629 1.38629
33324 0.01913 3.96627 * 1.46634 0.26236 0.00000 *
33325 //
33326 HMMER3/b [3.0 | March 2010]
33327 NAME 2_5.8_Metazoa_58S_start_twentysevenc_long
33328 LENG 45
33329 ALPH DNA
33330 RF no
33331 CS no
33332 MAP yes
33333 DATE Fri Feb 24 23:27:29 2012
33334 NSEQ 4
33335 EFFN 3.363281
33336 CKSUM 862441232
33337 STATS LOCAL MSV -8.0904 0.71931
33338 STATS LOCAL VITERBI -7.5210 0.71931
33339 STATS LOCAL FORWARD -4.2499 0.71931
33340 HMM A C G T
33341 m->m m->i m->d i->m i->i d->m d->d
33342 COMPO 1.44563 1.38319 1.31183 1.40936
33343 1.38629 1.38629 1.38629 1.38629
33344 0.03661 4.01877 4.01877 1.46634 0.26236 0.00000 *
33345 1 3.44798 0.12845 3.49681 2.83981 1 - -
33346 1.38629 1.38629 1.38629 1.38629
33347 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33348 2 0.14020 3.39317 2.81030 3.29606 2 - -
33349 1.38629 1.38629 1.38629 1.38629
33350 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33351 3 0.14020 3.39317 2.81030 3.29606 3 - -
33352 1.38629 1.38629 1.38629 1.38629
33353 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33354 4 3.44798 0.12845 3.49681 2.83981 4 - -
33355 1.38629 1.38629 1.38629 1.38629
33356 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33357 5 3.10166 2.60344 3.14932 0.17659 5 - -
33358 1.38629 1.38629 1.38629 1.38629
33359 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33360 6 3.10166 2.60344 3.14932 0.17659 6 - -
33361 1.38629 1.38629 1.38629 1.38629
33362 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33363 7 3.44798 0.12845 3.49681 2.83981 7 - -
33364 1.38629 1.38629 1.38629 1.38629
33365 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33366 8 3.10166 2.60344 3.14932 0.17659 8 - -
33367 1.38629 1.38629 1.38629 1.38629
33368 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33369 9 2.95651 3.60084 0.11574 3.50687 9 - -
33370 1.38629 1.38629 1.38629 1.38629
33371 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33372 10 0.14020 3.39317 2.81030 3.29606 10 - -
33373 1.38629 1.38629 1.38629 1.38629
33374 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33375 11 3.44798 0.12845 3.49681 2.83981 11 - -
33376 1.38629 1.38629 1.38629 1.38629
33377 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33378 12 2.95651 3.60084 0.11574 3.50687 12 - -
33379 1.38629 1.38629 1.38629 1.38629
33380 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33381 13 2.95651 3.60084 0.11574 3.50687 13 - -
33382 1.38629 1.38629 1.38629 1.38629
33383 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33384 14 3.10166 2.60344 3.14932 0.17659 14 - -
33385 1.38629 1.38629 1.38629 1.38629
33386 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33387 15 2.95651 3.60084 0.11574 3.50687 15 - -
33388 1.38629 1.38629 1.38629 1.38629
33389 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33390 16 2.95651 3.60084 0.11574 3.50687 16 - -
33391 1.38629 1.38629 1.38629 1.38629
33392 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33393 17 0.14020 3.39317 2.81030 3.29606 17 - -
33394 1.38629 1.38629 1.38629 1.38629
33395 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33396 18 3.10166 2.60344 3.14932 0.17659 18 - -
33397 1.38629 1.38629 1.38629 1.38629
33398 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33399 19 3.44798 0.12845 3.49681 2.83981 19 - -
33400 1.38629 1.38629 1.38629 1.38629
33401 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33402 20 3.10166 2.60344 3.14932 0.17659 20 - -
33403 1.38629 1.38629 1.38629 1.38629
33404 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33405 21 3.44798 0.12845 3.49681 2.83981 21 - -
33406 1.38629 1.38629 1.38629 1.38629
33407 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33408 22 3.10166 2.60344 3.14932 0.17659 22 - -
33409 1.38629 1.38629 1.38629 1.38629
33410 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33411 23 0.97344 2.14787 2.16342 0.94018 23 - -
33412 1.38629 1.38629 1.38629 1.38629
33413 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33414 24 2.95651 3.60084 0.11574 3.50687 24 - -
33415 1.38629 1.38629 1.38629 1.38629
33416 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33417 25 2.95651 3.60084 0.11574 3.50687 25 - -
33418 1.38629 1.38629 1.38629 1.38629
33419 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33420 26 3.44798 0.12845 3.49681 2.83981 26 - -
33421 1.38629 1.38629 1.38629 1.38629
33422 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33423 27 3.10166 2.60344 3.14932 0.17659 27 - -
33424 1.38629 1.38629 1.38629 1.38629
33425 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33426 28 3.44798 0.12845 3.49681 2.83981 28 - -
33427 1.38629 1.38629 1.38629 1.38629
33428 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33429 29 2.95651 3.60084 0.11574 3.50687 29 - -
33430 1.38629 1.38629 1.38629 1.38629
33431 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33432 30 3.10166 2.60344 3.14932 0.17659 30 - -
33433 1.38629 1.38629 1.38629 1.38629
33434 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33435 31 2.95651 3.60084 0.11574 3.50687 31 - -
33436 1.38629 1.38629 1.38629 1.38629
33437 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33438 32 3.44798 0.12845 3.49681 2.83981 32 - -
33439 1.38629 1.38629 1.38629 1.38629
33440 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33441 33 0.14020 3.39317 2.81030 3.29606 33 - -
33442 1.38629 1.38629 1.38629 1.38629
33443 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33444 34 3.10166 2.60344 3.14932 0.17659 34 - -
33445 1.38629 1.38629 1.38629 1.38629
33446 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33447 35 3.44798 0.12845 3.49681 2.83981 35 - -
33448 1.38629 1.38629 1.38629 1.38629
33449 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33450 36 2.95651 3.60084 0.11574 3.50687 36 - -
33451 1.38629 1.38629 1.38629 1.38629
33452 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33453 37 0.14020 3.39317 2.81030 3.29606 37 - -
33454 1.38629 1.38629 1.38629 1.38629
33455 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33456 38 3.10166 2.60344 3.14932 0.17659 38 - -
33457 1.38629 1.38629 1.38629 1.38629
33458 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33459 39 2.95651 3.60084 0.11574 3.50687 39 - -
33460 1.38629 1.38629 1.38629 1.38629
33461 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33462 40 0.14020 3.39317 2.81030 3.29606 40 - -
33463 1.38629 1.38629 1.38629 1.38629
33464 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33465 41 0.14020 3.39317 2.81030 3.29606 41 - -
33466 1.38629 1.38629 1.38629 1.38629
33467 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33468 42 2.95651 3.60084 0.11574 3.50687 42 - -
33469 1.38629 1.38629 1.38629 1.38629
33470 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33471 43 0.14020 3.39317 2.81030 3.29606 43 - -
33472 1.38629 1.38629 1.38629 1.38629
33473 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33474 44 0.14020 3.39317 2.81030 3.29606 44 - -
33475 1.38629 1.38629 1.38629 1.38629
33476 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
33477 45 3.44798 0.12845 3.49681 2.83981 45 - -
33478 1.38629 1.38629 1.38629 1.38629
33479 0.01847 4.00063 * 1.46634 0.26236 0.00000 *
33480 //
33481 HMMER3/b [3.0 | March 2010]
33482 NAME 2_5.8_Metazoa_58S_start_twentysevend_long
33483 LENG 45
33484 ALPH DNA
33485 RF no
33486 CS no
33487 MAP yes
33488 DATE Fri Feb 24 23:27:33 2012
33489 NSEQ 4
33490 EFFN 3.355469
33491 CKSUM 3256074058
33492 STATS LOCAL MSV -7.9928 0.71933
33493 STATS LOCAL VITERBI -7.4659 0.71933
33494 STATS LOCAL FORWARD -4.2898 0.71933
33495 HMM A C G T
33496 m->m m->i m->d i->m i->i d->m d->d
33497 COMPO 1.40045 1.36100 1.37985 1.40449
33498 1.38629 1.38629 1.38629 1.38629
33499 0.03666 4.01737 4.01737 1.46634 0.26236 0.00000 *
33500 1 3.44514 0.12878 3.49408 2.83774 1 - -
33501 1.38629 1.38629 1.38629 1.38629
33502 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33503 2 0.14052 3.39070 2.80870 3.29336 2 - -
33504 1.38629 1.38629 1.38629 1.38629
33505 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33506 3 0.14052 3.39070 2.80870 3.29336 3 - -
33507 1.38629 1.38629 1.38629 1.38629
33508 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33509 4 3.44514 0.12878 3.49408 2.83774 4 - -
33510 1.38629 1.38629 1.38629 1.38629
33511 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33512 5 3.09916 2.60185 3.14691 0.17699 5 - -
33513 1.38629 1.38629 1.38629 1.38629
33514 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33515 6 3.09916 2.60185 3.14691 0.17699 6 - -
33516 1.38629 1.38629 1.38629 1.38629
33517 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33518 7 3.44514 0.12878 3.49408 2.83774 7 - -
33519 1.38629 1.38629 1.38629 1.38629
33520 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33521 8 2.41122 0.95644 2.48325 0.81517 8 - -
33522 1.38629 1.38629 1.38629 1.38629
33523 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33524 9 0.14052 3.39070 2.80870 3.29336 9 - -
33525 1.38629 1.38629 1.38629 1.38629
33526 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33527 10 0.14052 3.39070 2.80870 3.29336 10 - -
33528 1.38629 1.38629 1.38629 1.38629
33529 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33530 11 3.44514 0.12878 3.49408 2.83774 11 - -
33531 1.38629 1.38629 1.38629 1.38629
33532 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33533 12 2.95480 3.59834 0.11601 3.50411 12 - -
33534 1.38629 1.38629 1.38629 1.38629
33535 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33536 13 2.95480 3.59834 0.11601 3.50411 13 - -
33537 1.38629 1.38629 1.38629 1.38629
33538 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33539 14 3.09916 2.60185 3.14691 0.17699 14 - -
33540 1.38629 1.38629 1.38629 1.38629
33541 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33542 15 2.95480 3.59834 0.11601 3.50411 15 - -
33543 1.38629 1.38629 1.38629 1.38629
33544 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33545 16 2.95480 3.59834 0.11601 3.50411 16 - -
33546 1.38629 1.38629 1.38629 1.38629
33547 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33548 17 0.14052 3.39070 2.80870 3.29336 17 - -
33549 1.38629 1.38629 1.38629 1.38629
33550 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33551 18 3.09916 2.60185 3.14691 0.17699 18 - -
33552 1.38629 1.38629 1.38629 1.38629
33553 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33554 19 3.44514 0.12878 3.49408 2.83774 19 - -
33555 1.38629 1.38629 1.38629 1.38629
33556 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33557 20 3.09916 2.60185 3.14691 0.17699 20 - -
33558 1.38629 1.38629 1.38629 1.38629
33559 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33560 21 3.44514 0.12878 3.49408 2.83774 21 - -
33561 1.38629 1.38629 1.38629 1.38629
33562 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33563 22 3.09916 2.60185 3.14691 0.17699 22 - -
33564 1.38629 1.38629 1.38629 1.38629
33565 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33566 23 3.44514 0.12878 3.49408 2.83774 23 - -
33567 1.38629 1.38629 1.38629 1.38629
33568 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33569 24 2.95480 3.59834 0.11601 3.50411 24 - -
33570 1.38629 1.38629 1.38629 1.38629
33571 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33572 25 2.95480 3.59834 0.11601 3.50411 25 - -
33573 1.38629 1.38629 1.38629 1.38629
33574 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33575 26 3.44514 0.12878 3.49408 2.83774 26 - -
33576 1.38629 1.38629 1.38629 1.38629
33577 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33578 27 3.09916 2.60185 3.14691 0.17699 27 - -
33579 1.38629 1.38629 1.38629 1.38629
33580 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33581 28 3.09916 2.60185 3.14691 0.17699 28 - -
33582 1.38629 1.38629 1.38629 1.38629
33583 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33584 29 2.95480 3.59834 0.11601 3.50411 29 - -
33585 1.38629 1.38629 1.38629 1.38629
33586 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33587 30 3.09916 2.60185 3.14691 0.17699 30 - -
33588 1.38629 1.38629 1.38629 1.38629
33589 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33590 31 2.95480 3.59834 0.11601 3.50411 31 - -
33591 1.38629 1.38629 1.38629 1.38629
33592 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33593 32 3.44514 0.12878 3.49408 2.83774 32 - -
33594 1.38629 1.38629 1.38629 1.38629
33595 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33596 33 0.14052 3.39070 2.80870 3.29336 33 - -
33597 1.38629 1.38629 1.38629 1.38629
33598 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33599 34 3.09916 2.60185 3.14691 0.17699 34 - -
33600 1.38629 1.38629 1.38629 1.38629
33601 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33602 35 3.44514 0.12878 3.49408 2.83774 35 - -
33603 1.38629 1.38629 1.38629 1.38629
33604 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33605 36 2.95480 3.59834 0.11601 3.50411 36 - -
33606 1.38629 1.38629 1.38629 1.38629
33607 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33608 37 0.14052 3.39070 2.80870 3.29336 37 - -
33609 1.38629 1.38629 1.38629 1.38629
33610 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33611 38 3.09916 2.60185 3.14691 0.17699 38 - -
33612 1.38629 1.38629 1.38629 1.38629
33613 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33614 39 2.95480 3.59834 0.11601 3.50411 39 - -
33615 1.38629 1.38629 1.38629 1.38629
33616 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33617 40 0.14052 3.39070 2.80870 3.29336 40 - -
33618 1.38629 1.38629 1.38629 1.38629
33619 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33620 41 0.14052 3.39070 2.80870 3.29336 41 - -
33621 1.38629 1.38629 1.38629 1.38629
33622 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33623 42 2.95480 3.59834 0.11601 3.50411 42 - -
33624 1.38629 1.38629 1.38629 1.38629
33625 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33626 43 0.14052 3.39070 2.80870 3.29336 43 - -
33627 1.38629 1.38629 1.38629 1.38629
33628 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33629 44 0.14052 3.39070 2.80870 3.29336 44 - -
33630 1.38629 1.38629 1.38629 1.38629
33631 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547
33632 45 3.44514 0.12878 3.49408 2.83774 45 - -
33633 1.38629 1.38629 1.38629 1.38629
33634 0.01850 3.99920 * 1.46634 0.26236 0.00000 *
33635 //
33636 HMMER3/b [3.0 | March 2010]
33637 NAME 2_5.8_Metazoa_58S_start_twentysevene_long
33638 LENG 45
33639 ALPH DNA
33640 RF no
33641 CS no
33642 MAP yes
33643 DATE Fri Feb 24 23:27:39 2012
33644 NSEQ 7
33645 EFFN 3.195801
33646 CKSUM 3140450226
33647 STATS LOCAL MSV -8.0348 0.71932
33648 STATS LOCAL VITERBI -7.6161 0.71932
33649 STATS LOCAL FORWARD -4.0740 0.71932
33650 HMM A C G T
33651 m->m m->i m->d i->m i->i d->m d->d
33652 COMPO 1.27701 1.32955 1.38039 1.58448
33653 1.38629 1.38629 1.38629 1.38629
33654 0.03777 3.98821 3.98821 1.46634 0.26236 0.00000 *
33655 1 3.38523 0.13607 3.43670 2.79401 1 - -
33656 1.38629 1.38629 1.38629 1.38629
33657 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33658 2 0.14750 3.33877 2.77489 3.23653 2 - -
33659 1.38629 1.38629 1.38629 1.38629
33660 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33661 3 0.14750 3.33877 2.77489 3.23653 3 - -
33662 1.38629 1.38629 1.38629 1.38629
33663 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33664 4 3.38523 0.13607 3.43670 2.79401 4 - -
33665 1.38629 1.38629 1.38629 1.38629
33666 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33667 5 3.04692 2.56858 3.09666 0.18555 5 - -
33668 1.38629 1.38629 1.38629 1.38629
33669 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33670 6 3.38523 0.13607 3.43670 2.79401 6 - -
33671 1.38629 1.38629 1.38629 1.38629
33672 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33673 7 0.14750 3.33877 2.77489 3.23653 7 - -
33674 1.38629 1.38629 1.38629 1.38629
33675 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33676 8 2.91836 3.54548 0.12189 3.44581 8 - -
33677 1.38629 1.38629 1.38629 1.38629
33678 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33679 9 0.14750 3.33877 2.77489 3.23653 9 - -
33680 1.38629 1.38629 1.38629 1.38629
33681 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33682 10 0.14750 3.33877 2.77489 3.23653 10 - -
33683 1.38629 1.38629 1.38629 1.38629
33684 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33685 11 3.38523 0.13607 3.43670 2.79401 11 - -
33686 1.38629 1.38629 1.38629 1.38629
33687 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33688 12 2.91836 3.54548 0.12189 3.44581 12 - -
33689 1.38629 1.38629 1.38629 1.38629
33690 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33691 13 2.91836 3.54548 0.12189 3.44581 13 - -
33692 1.38629 1.38629 1.38629 1.38629
33693 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33694 14 3.04692 2.56858 3.09666 0.18555 14 - -
33695 1.38629 1.38629 1.38629 1.38629
33696 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33697 15 2.91836 3.54548 0.12189 3.44581 15 - -
33698 1.38629 1.38629 1.38629 1.38629
33699 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33700 16 2.91836 3.54548 0.12189 3.44581 16 - -
33701 1.38629 1.38629 1.38629 1.38629
33702 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33703 17 0.14750 3.33877 2.77489 3.23653 17 - -
33704 1.38629 1.38629 1.38629 1.38629
33705 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33706 18 3.04692 2.56858 3.09666 0.18555 18 - -
33707 1.38629 1.38629 1.38629 1.38629
33708 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33709 19 3.38523 0.13607 3.43670 2.79401 19 - -
33710 1.38629 1.38629 1.38629 1.38629
33711 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33712 20 3.04692 2.56858 3.09666 0.18555 20 - -
33713 1.38629 1.38629 1.38629 1.38629
33714 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33715 21 3.38523 0.13607 3.43670 2.79401 21 - -
33716 1.38629 1.38629 1.38629 1.38629
33717 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33718 22 3.04692 2.56858 3.09666 0.18555 22 - -
33719 1.38629 1.38629 1.38629 1.38629
33720 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33721 23 3.04692 2.56858 3.09666 0.18555 23 - -
33722 1.38629 1.38629 1.38629 1.38629
33723 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33724 24 2.91836 3.54548 0.12189 3.44581 24 - -
33725 1.38629 1.38629 1.38629 1.38629
33726 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33727 25 2.91836 3.54548 0.12189 3.44581 25 - -
33728 1.38629 1.38629 1.38629 1.38629
33729 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33730 26 3.38523 0.13607 3.43670 2.79401 26 - -
33731 1.38629 1.38629 1.38629 1.38629
33732 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33733 27 3.04692 2.56858 3.09666 0.18555 27 - -
33734 1.38629 1.38629 1.38629 1.38629
33735 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33736 28 3.38523 0.13607 3.43670 2.79401 28 - -
33737 1.38629 1.38629 1.38629 1.38629
33738 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33739 29 0.14750 3.33877 2.77489 3.23653 29 - -
33740 1.38629 1.38629 1.38629 1.38629
33741 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33742 30 3.38523 0.13607 3.43670 2.79401 30 - -
33743 1.38629 1.38629 1.38629 1.38629
33744 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33745 31 2.91836 3.54548 0.12189 3.44581 31 - -
33746 1.38629 1.38629 1.38629 1.38629
33747 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33748 32 3.38523 0.13607 3.43670 2.79401 32 - -
33749 1.38629 1.38629 1.38629 1.38629
33750 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33751 33 0.14750 3.33877 2.77489 3.23653 33 - -
33752 1.38629 1.38629 1.38629 1.38629
33753 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33754 34 3.04692 2.56858 3.09666 0.18555 34 - -
33755 1.38629 1.38629 1.38629 1.38629
33756 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33757 35 3.38523 0.13607 3.43670 2.79401 35 - -
33758 1.38629 1.38629 1.38629 1.38629
33759 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33760 36 2.91836 3.54548 0.12189 3.44581 36 - -
33761 1.38629 1.38629 1.38629 1.38629
33762 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33763 37 0.14750 3.33877 2.77489 3.23653 37 - -
33764 1.38629 1.38629 1.38629 1.38629
33765 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33766 38 3.04692 2.56858 3.09666 0.18555 38 - -
33767 1.38629 1.38629 1.38629 1.38629
33768 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33769 39 2.91836 3.54548 0.12189 3.44581 39 - -
33770 1.38629 1.38629 1.38629 1.38629
33771 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33772 40 0.14750 3.33877 2.77489 3.23653 40 - -
33773 1.38629 1.38629 1.38629 1.38629
33774 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33775 41 0.14750 3.33877 2.77489 3.23653 41 - -
33776 1.38629 1.38629 1.38629 1.38629
33777 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33778 42 2.91836 3.54548 0.12189 3.44581 42 - -
33779 1.38629 1.38629 1.38629 1.38629
33780 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33781 43 0.14750 3.33877 2.77489 3.23653 43 - -
33782 1.38629 1.38629 1.38629 1.38629
33783 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33784 44 0.14750 3.33877 2.77489 3.23653 44 - -
33785 1.38629 1.38629 1.38629 1.38629
33786 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
33787 45 3.38523 0.13607 3.43670 2.79401 45 - -
33788 1.38629 1.38629 1.38629 1.38629
33789 0.01906 3.96950 * 1.46634 0.26236 0.00000 *
33790 //
33791 HMMER3/b [3.0 | March 2010]
33792 NAME 2_5.8_Metazoa_58S_start_twentysevenf_long
33793 LENG 45
33794 ALPH DNA
33795 RF no
33796 CS no
33797 MAP yes
33798 DATE Fri Feb 24 23:27:48 2012
33799 NSEQ 2
33800 EFFN 2.000000
33801 CKSUM 2853933875
33802 STATS LOCAL MSV -7.5713 0.72765
33803 STATS LOCAL VITERBI -8.1497 0.72765
33804 STATS LOCAL FORWARD -3.4317 0.72765
33805 HMM A C G T
33806 m->m m->i m->d i->m i->i d->m d->d
33807 COMPO 1.39938 1.29426 1.32042 1.55057
33808 1.38629 1.38629 1.38629 1.38629
33809 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
33810 1 2.81865 0.23582 2.88868 2.35662 1 - -
33811 1.38629 1.38629 1.38629 1.38629
33812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33813 2 0.23862 2.84929 2.43386 2.70756 2 - -
33814 1.38629 1.38629 1.38629 1.38629
33815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33816 3 0.23862 2.84929 2.43386 2.70756 3 - -
33817 1.38629 1.38629 1.38629 1.38629
33818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33819 4 2.81865 0.23582 2.88868 2.35662 4 - -
33820 1.38629 1.38629 1.38629 1.38629
33821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33822 5 2.57915 2.25909 2.64442 0.28946 5 - -
33823 1.38629 1.38629 1.38629 1.38629
33824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33825 6 2.81865 0.23582 2.88868 2.35662 6 - -
33826 1.38629 1.38629 1.38629 1.38629
33827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33828 7 2.53331 3.02441 0.20344 2.88069 7 - -
33829 1.38629 1.38629 1.38629 1.38629
33830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33831 8 2.81865 0.23582 2.88868 2.35662 8 - -
33832 1.38629 1.38629 1.38629 1.38629
33833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33834 9 2.53331 3.02441 0.20344 2.88069 9 - -
33835 1.38629 1.38629 1.38629 1.38629
33836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33837 10 0.23862 2.84929 2.43386 2.70756 10 - -
33838 1.38629 1.38629 1.38629 1.38629
33839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33840 11 2.81865 0.23582 2.88868 2.35662 11 - -
33841 1.38629 1.38629 1.38629 1.38629
33842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33843 12 2.53331 3.02441 0.20344 2.88069 12 - -
33844 1.38629 1.38629 1.38629 1.38629
33845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33846 13 2.53331 3.02441 0.20344 2.88069 13 - -
33847 1.38629 1.38629 1.38629 1.38629
33848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33849 14 2.57915 2.25909 2.64442 0.28946 14 - -
33850 1.38629 1.38629 1.38629 1.38629
33851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33852 15 2.53331 3.02441 0.20344 2.88069 15 - -
33853 1.38629 1.38629 1.38629 1.38629
33854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33855 16 2.53331 3.02441 0.20344 2.88069 16 - -
33856 1.38629 1.38629 1.38629 1.38629
33857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33858 17 0.23862 2.84929 2.43386 2.70756 17 - -
33859 1.38629 1.38629 1.38629 1.38629
33860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33861 18 2.57915 2.25909 2.64442 0.28946 18 - -
33862 1.38629 1.38629 1.38629 1.38629
33863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33864 19 2.81865 0.23582 2.88868 2.35662 19 - -
33865 1.38629 1.38629 1.38629 1.38629
33866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33867 20 2.57915 2.25909 2.64442 0.28946 20 - -
33868 1.38629 1.38629 1.38629 1.38629
33869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33870 21 2.81865 0.23582 2.88868 2.35662 21 - -
33871 1.38629 1.38629 1.38629 1.38629
33872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33873 22 2.57915 2.25909 2.64442 0.28946 22 - -
33874 1.38629 1.38629 1.38629 1.38629
33875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33876 23 2.57915 2.25909 2.64442 0.28946 23 - -
33877 1.38629 1.38629 1.38629 1.38629
33878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33879 24 2.53331 3.02441 0.20344 2.88069 24 - -
33880 1.38629 1.38629 1.38629 1.38629
33881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33882 25 2.53331 3.02441 0.20344 2.88069 25 - -
33883 1.38629 1.38629 1.38629 1.38629
33884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33885 26 2.81865 0.23582 2.88868 2.35662 26 - -
33886 1.38629 1.38629 1.38629 1.38629
33887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33888 27 2.57915 2.25909 2.64442 0.28946 27 - -
33889 1.38629 1.38629 1.38629 1.38629
33890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33891 28 2.81865 0.23582 2.88868 2.35662 28 - -
33892 1.38629 1.38629 1.38629 1.38629
33893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33894 29 0.23862 2.84929 2.43386 2.70756 29 - -
33895 1.38629 1.38629 1.38629 1.38629
33896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33897 30 2.81865 0.23582 2.88868 2.35662 30 - -
33898 1.38629 1.38629 1.38629 1.38629
33899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33900 31 2.53331 3.02441 0.20344 2.88069 31 - -
33901 1.38629 1.38629 1.38629 1.38629
33902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33903 32 2.81865 0.23582 2.88868 2.35662 32 - -
33904 1.38629 1.38629 1.38629 1.38629
33905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33906 33 0.23862 2.84929 2.43386 2.70756 33 - -
33907 1.38629 1.38629 1.38629 1.38629
33908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33909 34 2.57915 2.25909 2.64442 0.28946 34 - -
33910 1.38629 1.38629 1.38629 1.38629
33911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33912 35 2.81865 0.23582 2.88868 2.35662 35 - -
33913 1.38629 1.38629 1.38629 1.38629
33914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33915 36 2.53331 3.02441 0.20344 2.88069 36 - -
33916 1.38629 1.38629 1.38629 1.38629
33917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33918 37 0.23862 2.84929 2.43386 2.70756 37 - -
33919 1.38629 1.38629 1.38629 1.38629
33920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33921 38 2.57915 2.25909 2.64442 0.28946 38 - -
33922 1.38629 1.38629 1.38629 1.38629
33923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33924 39 2.53331 3.02441 0.20344 2.88069 39 - -
33925 1.38629 1.38629 1.38629 1.38629
33926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33927 40 0.23862 2.84929 2.43386 2.70756 40 - -
33928 1.38629 1.38629 1.38629 1.38629
33929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33930 41 0.23862 2.84929 2.43386 2.70756 41 - -
33931 1.38629 1.38629 1.38629 1.38629
33932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33933 42 2.53331 3.02441 0.20344 2.88069 42 - -
33934 1.38629 1.38629 1.38629 1.38629
33935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33936 43 0.23862 2.84929 2.43386 2.70756 43 - -
33937 1.38629 1.38629 1.38629 1.38629
33938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33939 44 0.23862 2.84929 2.43386 2.70756 44 - -
33940 1.38629 1.38629 1.38629 1.38629
33941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33942 45 2.81865 0.23582 2.88868 2.35662 45 - -
33943 1.38629 1.38629 1.38629 1.38629
33944 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
33945 //
33946 HMMER3/b [3.0 | March 2010]
33947 NAME 2_5.8_Metazoa_58S_start_twentyseveng_long
33948 LENG 45
33949 ALPH DNA
33950 RF no
33951 CS no
33952 MAP yes
33953 DATE Fri Feb 24 23:27:53 2012
33954 NSEQ 2
33955 EFFN 2.000000
33956 CKSUM 2803901569
33957 STATS LOCAL MSV -7.6218 0.72807
33958 STATS LOCAL VITERBI -8.1462 0.72807
33959 STATS LOCAL FORWARD -3.4806 0.72807
33960 HMM A C G T
33961 m->m m->i m->d i->m i->i d->m d->d
33962 COMPO 1.39704 1.39574 1.37569 1.37692
33963 1.38629 1.38629 1.38629 1.38629
33964 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
33965 1 2.81865 0.23582 2.88868 2.35662 1 - -
33966 1.38629 1.38629 1.38629 1.38629
33967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33968 2 0.23862 2.84929 2.43386 2.70756 2 - -
33969 1.38629 1.38629 1.38629 1.38629
33970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33971 3 0.23862 2.84929 2.43386 2.70756 3 - -
33972 1.38629 1.38629 1.38629 1.38629
33973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33974 4 2.81865 0.23582 2.88868 2.35662 4 - -
33975 1.38629 1.38629 1.38629 1.38629
33976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33977 5 2.57915 2.25909 2.64442 0.28946 5 - -
33978 1.38629 1.38629 1.38629 1.38629
33979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33980 6 2.57915 2.25909 2.64442 0.28946 6 - -
33981 1.38629 1.38629 1.38629 1.38629
33982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33983 7 2.57915 2.25909 2.64442 0.28946 7 - -
33984 1.38629 1.38629 1.38629 1.38629
33985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33986 8 2.57915 2.25909 2.64442 0.28946 8 - -
33987 1.38629 1.38629 1.38629 1.38629
33988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33989 9 2.53331 3.02441 0.20344 2.88069 9 - -
33990 1.38629 1.38629 1.38629 1.38629
33991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33992 10 0.23862 2.84929 2.43386 2.70756 10 - -
33993 1.38629 1.38629 1.38629 1.38629
33994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33995 11 2.81865 0.23582 2.88868 2.35662 11 - -
33996 1.38629 1.38629 1.38629 1.38629
33997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33998 12 2.53331 3.02441 0.20344 2.88069 12 - -
33999 1.38629 1.38629 1.38629 1.38629
34000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34001 13 2.53331 3.02441 0.20344 2.88069 13 - -
34002 1.38629 1.38629 1.38629 1.38629
34003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34004 14 2.57915 2.25909 2.64442 0.28946 14 - -
34005 1.38629 1.38629 1.38629 1.38629
34006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34007 15 2.53331 3.02441 0.20344 2.88069 15 - -
34008 1.38629 1.38629 1.38629 1.38629
34009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34010 16 2.53331 3.02441 0.20344 2.88069 16 - -
34011 1.38629 1.38629 1.38629 1.38629
34012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34013 17 0.23862 2.84929 2.43386 2.70756 17 - -
34014 1.38629 1.38629 1.38629 1.38629
34015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34016 18 2.57915 2.25909 2.64442 0.28946 18 - -
34017 1.38629 1.38629 1.38629 1.38629
34018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34019 19 2.81865 0.23582 2.88868 2.35662 19 - -
34020 1.38629 1.38629 1.38629 1.38629
34021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34022 20 2.57915 2.25909 2.64442 0.28946 20 - -
34023 1.38629 1.38629 1.38629 1.38629
34024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34025 21 2.81865 0.23582 2.88868 2.35662 21 - -
34026 1.38629 1.38629 1.38629 1.38629
34027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34028 22 2.57915 2.25909 2.64442 0.28946 22 - -
34029 1.38629 1.38629 1.38629 1.38629
34030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34031 23 2.57915 2.25909 2.64442 0.28946 23 - -
34032 1.38629 1.38629 1.38629 1.38629
34033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34034 24 2.53331 3.02441 0.20344 2.88069 24 - -
34035 1.38629 1.38629 1.38629 1.38629
34036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34037 25 2.53331 3.02441 0.20344 2.88069 25 - -
34038 1.38629 1.38629 1.38629 1.38629
34039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34040 26 2.81865 0.23582 2.88868 2.35662 26 - -
34041 1.38629 1.38629 1.38629 1.38629
34042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34043 27 2.57915 2.25909 2.64442 0.28946 27 - -
34044 1.38629 1.38629 1.38629 1.38629
34045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34046 28 2.81865 0.23582 2.88868 2.35662 28 - -
34047 1.38629 1.38629 1.38629 1.38629
34048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34049 29 0.23862 2.84929 2.43386 2.70756 29 - -
34050 1.38629 1.38629 1.38629 1.38629
34051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34052 30 2.81865 0.23582 2.88868 2.35662 30 - -
34053 1.38629 1.38629 1.38629 1.38629
34054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34055 31 2.53331 3.02441 0.20344 2.88069 31 - -
34056 1.38629 1.38629 1.38629 1.38629
34057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34058 32 2.81865 0.23582 2.88868 2.35662 32 - -
34059 1.38629 1.38629 1.38629 1.38629
34060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34061 33 0.23862 2.84929 2.43386 2.70756 33 - -
34062 1.38629 1.38629 1.38629 1.38629
34063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34064 34 2.57915 2.25909 2.64442 0.28946 34 - -
34065 1.38629 1.38629 1.38629 1.38629
34066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34067 35 2.81865 0.23582 2.88868 2.35662 35 - -
34068 1.38629 1.38629 1.38629 1.38629
34069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34070 36 2.53331 3.02441 0.20344 2.88069 36 - -
34071 1.38629 1.38629 1.38629 1.38629
34072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34073 37 0.23862 2.84929 2.43386 2.70756 37 - -
34074 1.38629 1.38629 1.38629 1.38629
34075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34076 38 2.57915 2.25909 2.64442 0.28946 38 - -
34077 1.38629 1.38629 1.38629 1.38629
34078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34079 39 2.53331 3.02441 0.20344 2.88069 39 - -
34080 1.38629 1.38629 1.38629 1.38629
34081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34082 40 0.23862 2.84929 2.43386 2.70756 40 - -
34083 1.38629 1.38629 1.38629 1.38629
34084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34085 41 0.23862 2.84929 2.43386 2.70756 41 - -
34086 1.38629 1.38629 1.38629 1.38629
34087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34088 42 2.53331 3.02441 0.20344 2.88069 42 - -
34089 1.38629 1.38629 1.38629 1.38629
34090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34091 43 0.23862 2.84929 2.43386 2.70756 43 - -
34092 1.38629 1.38629 1.38629 1.38629
34093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34094 44 0.23862 2.84929 2.43386 2.70756 44 - -
34095 1.38629 1.38629 1.38629 1.38629
34096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34097 45 2.81865 0.23582 2.88868 2.35662 45 - -
34098 1.38629 1.38629 1.38629 1.38629
34099 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
34100 //
34101 HMMER3/b [3.0 | March 2010]
34102 NAME 2_5.8_Metazoa_58S_start_twentysix_long
34103 LENG 45
34104 ALPH DNA
34105 RF no
34106 CS no
34107 MAP yes
34108 DATE Fri Feb 24 23:27:08 2012
34109 NSEQ 253
34110 EFFN 4.026474
34111 CKSUM 1317147062
34112 STATS LOCAL MSV -7.2295 0.71931
34113 STATS LOCAL VITERBI -7.5384 0.71931
34114 STATS LOCAL FORWARD -4.2378 0.71931
34115 HMM A C G T
34116 m->m m->i m->d i->m i->i d->m d->d
34117 COMPO 1.39703 1.43388 1.38321 1.33365
34118 1.38629 1.38629 1.38629 1.38629
34119 0.03265 4.13140 4.13140 1.46634 0.26236 0.00000 *
34120 1 3.40850 0.15906 3.45793 2.49536 1 - -
34121 1.38629 1.38629 1.38629 1.38629
34122 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34123 2 0.11797 3.58132 2.93141 3.50261 2 - -
34124 1.38629 1.38629 1.38629 1.38629
34125 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34126 3 0.11797 3.58132 2.93141 3.50261 3 - -
34127 1.38629 1.38629 1.38629 1.38629
34128 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34129 4 3.59353 0.11910 3.63549 2.84027 4 - -
34130 1.38629 1.38629 1.38629 1.38629
34131 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34132 5 3.29641 2.72699 3.33646 0.14849 5 - -
34133 1.38629 1.38629 1.38629 1.38629
34134 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34135 6 3.22497 2.53341 3.26815 0.17105 6 - -
34136 1.38629 1.38629 1.38629 1.38629
34137 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34138 7 3.10291 2.24632 3.15164 0.21504 7 - -
34139 1.38629 1.38629 1.38629 1.38629
34140 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34141 8 2.85111 2.18143 3.02339 0.24756 8 - -
34142 1.38629 1.38629 1.38629 1.38629
34143 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34144 9 0.56245 2.70702 1.24874 2.56935 9 - -
34145 1.38629 1.38629 1.38629 1.38629
34146 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34147 10 0.12854 3.53848 2.81268 3.45705 10 - -
34148 1.38629 1.38629 1.38629 1.38629
34149 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34150 11 3.66283 0.10585 3.70202 2.99357 11 - -
34151 1.38629 1.38629 1.38629 1.38629
34152 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34153 12 3.08319 3.78761 0.09744 3.71385 12 - -
34154 1.38629 1.38629 1.38629 1.38629
34155 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34156 13 3.08319 3.78761 0.09744 3.71385 13 - -
34157 1.38629 1.38629 1.38629 1.38629
34158 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34159 14 3.25561 2.61343 3.29740 0.16113 14 - -
34160 1.38629 1.38629 1.38629 1.38629
34161 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34162 15 3.08319 3.78761 0.09744 3.71385 15 - -
34163 1.38629 1.38629 1.38629 1.38629
34164 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34165 16 3.08319 3.78761 0.09744 3.71385 16 - -
34166 1.38629 1.38629 1.38629 1.38629
34167 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34168 17 0.11797 3.58132 2.93141 3.50261 17 - -
34169 1.38629 1.38629 1.38629 1.38629
34170 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34171 18 3.29641 2.72699 3.33646 0.14849 18 - -
34172 1.38629 1.38629 1.38629 1.38629
34173 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34174 19 3.66283 0.10585 3.70202 2.99357 19 - -
34175 1.38629 1.38629 1.38629 1.38629
34176 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34177 20 3.29641 2.72699 3.33646 0.14849 20 - -
34178 1.38629 1.38629 1.38629 1.38629
34179 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34180 21 3.66283 0.10585 3.70202 2.99357 21 - -
34181 1.38629 1.38629 1.38629 1.38629
34182 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34183 22 3.29641 2.72699 3.33646 0.14849 22 - -
34184 1.38629 1.38629 1.38629 1.38629
34185 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34186 23 2.09673 2.47384 2.75948 0.31532 23 - -
34187 1.38629 1.38629 1.38629 1.38629
34188 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34189 24 3.08319 3.78761 0.09744 3.71385 24 - -
34190 1.38629 1.38629 1.38629 1.38629
34191 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34192 25 3.08319 3.78761 0.09744 3.71385 25 - -
34193 1.38629 1.38629 1.38629 1.38629
34194 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34195 26 3.66283 0.10585 3.70202 2.99357 26 - -
34196 1.38629 1.38629 1.38629 1.38629
34197 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34198 27 3.29641 2.72699 3.33646 0.14849 27 - -
34199 1.38629 1.38629 1.38629 1.38629
34200 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34201 28 3.66283 0.10585 3.70202 2.99357 28 - -
34202 1.38629 1.38629 1.38629 1.38629
34203 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34204 29 1.22589 2.72482 0.56994 2.58517 29 - -
34205 1.38629 1.38629 1.38629 1.38629
34206 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34207 30 2.57847 1.17628 2.64686 0.60731 30 - -
34208 1.38629 1.38629 1.38629 1.38629
34209 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34210 31 3.03660 3.50808 0.11130 3.59791 31 - -
34211 1.38629 1.38629 1.38629 1.38629
34212 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34213 32 2.87089 0.28327 2.66540 2.11638 32 - -
34214 1.38629 1.38629 1.38629 1.38629
34215 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34216 33 0.11797 3.58132 2.93141 3.50261 33 - -
34217 1.38629 1.38629 1.38629 1.38629
34218 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34219 34 3.29641 2.72699 3.33646 0.14849 34 - -
34220 1.38629 1.38629 1.38629 1.38629
34221 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34222 35 3.66283 0.10585 3.70202 2.99357 35 - -
34223 1.38629 1.38629 1.38629 1.38629
34224 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34225 36 3.08319 3.78761 0.09744 3.71385 36 - -
34226 1.38629 1.38629 1.38629 1.38629
34227 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34228 37 0.11797 3.58132 2.93141 3.50261 37 - -
34229 1.38629 1.38629 1.38629 1.38629
34230 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34231 38 3.29641 2.72699 3.33646 0.14849 38 - -
34232 1.38629 1.38629 1.38629 1.38629
34233 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34234 39 3.08319 3.78761 0.09744 3.71385 39 - -
34235 1.38629 1.38629 1.38629 1.38629
34236 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34237 40 0.11797 3.58132 2.93141 3.50261 40 - -
34238 1.38629 1.38629 1.38629 1.38629
34239 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34240 41 0.14845 3.13087 2.85707 3.30125 41 - -
34241 1.38629 1.38629 1.38629 1.38629
34242 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34243 42 3.08319 3.78761 0.09744 3.71385 42 - -
34244 1.38629 1.38629 1.38629 1.38629
34245 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34246 43 0.11797 3.58132 2.93141 3.50261 43 - -
34247 1.38629 1.38629 1.38629 1.38629
34248 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34249 44 0.11797 3.58132 2.93141 3.50261 44 - -
34250 1.38629 1.38629 1.38629 1.38629
34251 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547
34252 45 3.66283 0.10585 3.70202 2.99357 45 - -
34253 1.38629 1.38629 1.38629 1.38629
34254 0.01646 4.11521 * 1.46634 0.26236 0.00000 *
34255 //
34256 HMMER3/b [3.0 | March 2010]
34257 NAME 2_5.8_Metazoa_58S_start_twentythreea_long
34258 LENG 45
34259 ALPH DNA
34260 RF no
34261 CS no
34262 MAP yes
34263 DATE Fri Feb 24 23:26:34 2012
34264 NSEQ 2
34265 EFFN 2.000000
34266 CKSUM 2259417781
34267 STATS LOCAL MSV -7.6133 0.72781
34268 STATS LOCAL VITERBI -8.2844 0.72781
34269 STATS LOCAL FORWARD -3.9462 0.72781
34270 HMM A C G T
34271 m->m m->i m->d i->m i->i d->m d->d
34272 COMPO 1.33950 1.52792 1.26007 1.43800
34273 1.38629 1.38629 1.38629 1.38629
34274 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
34275 1 2.81865 0.23582 2.88868 2.35662 1 - -
34276 1.38629 1.38629 1.38629 1.38629
34277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34278 2 2.57915 2.25909 2.64442 0.28946 2 - -
34279 1.38629 1.38629 1.38629 1.38629
34280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34281 3 0.23862 2.84929 2.43386 2.70756 3 - -
34282 1.38629 1.38629 1.38629 1.38629
34283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34284 4 2.53331 3.02441 0.20344 2.88069 4 - -
34285 1.38629 1.38629 1.38629 1.38629
34286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34287 5 2.81865 0.23582 2.88868 2.35662 5 - -
34288 1.38629 1.38629 1.38629 1.38629
34289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34290 6 2.57915 2.25909 2.64442 0.28946 6 - -
34291 1.38629 1.38629 1.38629 1.38629
34292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34293 7 2.57915 2.25909 2.64442 0.28946 7 - -
34294 1.38629 1.38629 1.38629 1.38629
34295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34296 8 2.81865 0.23582 2.88868 2.35662 8 - -
34297 1.38629 1.38629 1.38629 1.38629
34298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34299 9 0.23862 2.84929 2.43386 2.70756 9 - -
34300 1.38629 1.38629 1.38629 1.38629
34301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34302 10 2.53331 3.02441 0.20344 2.88069 10 - -
34303 1.38629 1.38629 1.38629 1.38629
34304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34305 11 2.81865 0.23582 2.88868 2.35662 11 - -
34306 1.38629 1.38629 1.38629 1.38629
34307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34308 12 2.53331 3.02441 0.20344 2.88069 12 - -
34309 1.38629 1.38629 1.38629 1.38629
34310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34311 13 0.23862 2.84929 2.43386 2.70756 13 - -
34312 1.38629 1.38629 1.38629 1.38629
34313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34314 14 2.57915 2.25909 2.64442 0.28946 14 - -
34315 1.38629 1.38629 1.38629 1.38629
34316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34317 15 2.53331 3.02441 0.20344 2.88069 15 - -
34318 1.38629 1.38629 1.38629 1.38629
34319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34320 16 2.53331 3.02441 0.20344 2.88069 16 - -
34321 1.38629 1.38629 1.38629 1.38629
34322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34323 17 0.23862 2.84929 2.43386 2.70756 17 - -
34324 1.38629 1.38629 1.38629 1.38629
34325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34326 18 2.57915 2.25909 2.64442 0.28946 18 - -
34327 1.38629 1.38629 1.38629 1.38629
34328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34329 19 2.81865 0.23582 2.88868 2.35662 19 - -
34330 1.38629 1.38629 1.38629 1.38629
34331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34332 20 2.53331 3.02441 0.20344 2.88069 20 - -
34333 1.38629 1.38629 1.38629 1.38629
34334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34335 21 2.53331 3.02441 0.20344 2.88069 21 - -
34336 1.38629 1.38629 1.38629 1.38629
34337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34338 22 2.57915 2.25909 2.64442 0.28946 22 - -
34339 1.38629 1.38629 1.38629 1.38629
34340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34341 23 2.57915 2.25909 2.64442 0.28946 23 - -
34342 1.38629 1.38629 1.38629 1.38629
34343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34344 24 2.53331 3.02441 0.20344 2.88069 24 - -
34345 1.38629 1.38629 1.38629 1.38629
34346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34347 25 2.81865 0.23582 2.88868 2.35662 25 - -
34348 1.38629 1.38629 1.38629 1.38629
34349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34350 26 0.23862 2.84929 2.43386 2.70756 26 - -
34351 1.38629 1.38629 1.38629 1.38629
34352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34353 27 2.57915 2.25909 2.64442 0.28946 27 - -
34354 1.38629 1.38629 1.38629 1.38629
34355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34356 28 2.81865 0.23582 2.88868 2.35662 28 - -
34357 1.38629 1.38629 1.38629 1.38629
34358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34359 29 2.53331 3.02441 0.20344 2.88069 29 - -
34360 1.38629 1.38629 1.38629 1.38629
34361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34362 30 0.23862 2.84929 2.43386 2.70756 30 - -
34363 1.38629 1.38629 1.38629 1.38629
34364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34365 31 2.53331 3.02441 0.20344 2.88069 31 - -
34366 1.38629 1.38629 1.38629 1.38629
34367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34368 32 2.57915 2.25909 2.64442 0.28946 32 - -
34369 1.38629 1.38629 1.38629 1.38629
34370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34371 33 0.23862 2.84929 2.43386 2.70756 33 - -
34372 1.38629 1.38629 1.38629 1.38629
34373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34374 34 2.57915 2.25909 2.64442 0.28946 34 - -
34375 1.38629 1.38629 1.38629 1.38629
34376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34377 35 2.81865 0.23582 2.88868 2.35662 35 - -
34378 1.38629 1.38629 1.38629 1.38629
34379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34380 36 2.53331 3.02441 0.20344 2.88069 36 - -
34381 1.38629 1.38629 1.38629 1.38629
34382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34383 37 0.23862 2.84929 2.43386 2.70756 37 - -
34384 1.38629 1.38629 1.38629 1.38629
34385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34386 38 2.57915 2.25909 2.64442 0.28946 38 - -
34387 1.38629 1.38629 1.38629 1.38629
34388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34389 39 2.53331 3.02441 0.20344 2.88069 39 - -
34390 1.38629 1.38629 1.38629 1.38629
34391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34392 40 0.23862 2.84929 2.43386 2.70756 40 - -
34393 1.38629 1.38629 1.38629 1.38629
34394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34395 41 0.23862 2.84929 2.43386 2.70756 41 - -
34396 1.38629 1.38629 1.38629 1.38629
34397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34398 42 2.53331 3.02441 0.20344 2.88069 42 - -
34399 1.38629 1.38629 1.38629 1.38629
34400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34401 43 0.23862 2.84929 2.43386 2.70756 43 - -
34402 1.38629 1.38629 1.38629 1.38629
34403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34404 44 0.23862 2.84929 2.43386 2.70756 44 - -
34405 1.38629 1.38629 1.38629 1.38629
34406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34407 45 2.81865 0.23582 2.88868 2.35662 45 - -
34408 1.38629 1.38629 1.38629 1.38629
34409 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
34410 //
34411 HMMER3/b [3.0 | March 2010]
34412 NAME 2_5.8_Metazoa_58S_start_twentythreeb_long
34413 LENG 45
34414 ALPH DNA
34415 RF no
34416 CS no
34417 MAP yes
34418 DATE Fri Feb 24 23:26:41 2012
34419 NSEQ 43
34420 EFFN 3.760925
34421 CKSUM 3682624133
34422 STATS LOCAL MSV -7.3174 0.71933
34423 STATS LOCAL VITERBI -7.6672 0.71933
34424 STATS LOCAL FORWARD -4.3209 0.71933
34425 HMM A C G T
34426 m->m m->i m->d i->m i->i d->m d->d
34427 COMPO 1.31564 1.59503 1.29739 1.36433
34428 1.38629 1.38629 1.38629 1.38629
34429 0.03413 4.08781 4.08781 1.46634 0.26236 0.00000 *
34430 1 1.83504 0.73322 2.26296 1.36261 1 - -
34431 1.38629 1.38629 1.38629 1.38629
34432 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34433 2 3.22243 2.68004 3.26539 0.15853 2 - -
34434 1.38629 1.38629 1.38629 1.38629
34435 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34436 3 0.12580 3.51085 2.88617 3.42515 3 - -
34437 1.38629 1.38629 1.38629 1.38629
34438 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34439 4 3.03658 3.71852 0.10380 3.63715 4 - -
34440 1.38629 1.38629 1.38629 1.38629
34441 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34442 5 3.58284 0.11369 3.62571 2.93680 5 - -
34443 1.38629 1.38629 1.38629 1.38629
34444 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34445 6 2.89860 1.95235 2.95493 0.28651 6 - -
34446 1.38629 1.38629 1.38629 1.38629
34447 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34448 7 3.22243 2.68004 3.26539 0.15853 7 - -
34449 1.38629 1.38629 1.38629 1.38629
34450 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34451 8 2.49156 0.79132 2.56312 0.94956 8 - -
34452 1.38629 1.38629 1.38629 1.38629
34453 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34454 9 0.12580 3.51085 2.88617 3.42515 9 - -
34455 1.38629 1.38629 1.38629 1.38629
34456 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34457 10 3.03658 3.71852 0.10380 3.63715 10 - -
34458 1.38629 1.38629 1.38629 1.38629
34459 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34460 11 3.58284 0.11369 3.62571 2.93680 11 - -
34461 1.38629 1.38629 1.38629 1.38629
34462 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34463 12 3.03658 3.71852 0.10380 3.63715 12 - -
34464 1.38629 1.38629 1.38629 1.38629
34465 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34466 13 0.12580 3.51085 2.88617 3.42515 13 - -
34467 1.38629 1.38629 1.38629 1.38629
34468 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34469 14 3.22243 2.68004 3.26539 0.15853 14 - -
34470 1.38629 1.38629 1.38629 1.38629
34471 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34472 15 3.03658 3.71852 0.10380 3.63715 15 - -
34473 1.38629 1.38629 1.38629 1.38629
34474 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34475 16 3.03658 3.71852 0.10380 3.63715 16 - -
34476 1.38629 1.38629 1.38629 1.38629
34477 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34478 17 0.12580 3.51085 2.88617 3.42515 17 - -
34479 1.38629 1.38629 1.38629 1.38629
34480 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34481 18 3.22243 2.68004 3.26539 0.15853 18 - -
34482 1.38629 1.38629 1.38629 1.38629
34483 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34484 19 3.58284 0.11369 3.62571 2.93680 19 - -
34485 1.38629 1.38629 1.38629 1.38629
34486 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34487 20 3.03658 3.71852 0.10380 3.63715 20 - -
34488 1.38629 1.38629 1.38629 1.38629
34489 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34490 21 3.03658 3.71852 0.10380 3.63715 21 - -
34491 1.38629 1.38629 1.38629 1.38629
34492 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34493 22 3.22243 2.68004 3.26539 0.15853 22 - -
34494 1.38629 1.38629 1.38629 1.38629
34495 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34496 23 2.49781 1.06169 2.56808 0.70283 23 - -
34497 1.38629 1.38629 1.38629 1.38629
34498 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34499 24 3.03658 3.71852 0.10380 3.63715 24 - -
34500 1.38629 1.38629 1.38629 1.38629
34501 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34502 25 0.12580 3.51085 2.88617 3.42515 25 - -
34503 1.38629 1.38629 1.38629 1.38629
34504 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34505 26 3.22243 2.68004 3.26539 0.15853 26 - -
34506 1.38629 1.38629 1.38629 1.38629
34507 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34508 27 3.22243 2.68004 3.26539 0.15853 27 - -
34509 1.38629 1.38629 1.38629 1.38629
34510 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34511 28 3.29640 0.15708 3.05878 2.79028 28 - -
34512 1.38629 1.38629 1.38629 1.38629
34513 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34514 29 3.03658 3.71852 0.10380 3.63715 29 - -
34515 1.38629 1.38629 1.38629 1.38629
34516 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34517 30 3.58284 0.11369 3.62571 2.93680 30 - -
34518 1.38629 1.38629 1.38629 1.38629
34519 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34520 31 3.03658 3.71852 0.10380 3.63715 31 - -
34521 1.38629 1.38629 1.38629 1.38629
34522 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34523 32 3.22243 2.68004 3.26539 0.15853 32 - -
34524 1.38629 1.38629 1.38629 1.38629
34525 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34526 33 0.12580 3.51085 2.88617 3.42515 33 - -
34527 1.38629 1.38629 1.38629 1.38629
34528 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34529 34 3.22243 2.68004 3.26539 0.15853 34 - -
34530 1.38629 1.38629 1.38629 1.38629
34531 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34532 35 3.58284 0.11369 3.62571 2.93680 35 - -
34533 1.38629 1.38629 1.38629 1.38629
34534 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34535 36 3.03658 3.71852 0.10380 3.63715 36 - -
34536 1.38629 1.38629 1.38629 1.38629
34537 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34538 37 0.12580 3.51085 2.88617 3.42515 37 - -
34539 1.38629 1.38629 1.38629 1.38629
34540 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34541 38 3.22243 2.68004 3.26539 0.15853 38 - -
34542 1.38629 1.38629 1.38629 1.38629
34543 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34544 39 3.03658 3.71852 0.10380 3.63715 39 - -
34545 1.38629 1.38629 1.38629 1.38629
34546 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34547 40 0.12580 3.51085 2.88617 3.42515 40 - -
34548 1.38629 1.38629 1.38629 1.38629
34549 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34550 41 0.12580 3.51085 2.88617 3.42515 41 - -
34551 1.38629 1.38629 1.38629 1.38629
34552 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34553 42 0.12580 3.51085 2.88617 3.42515 42 - -
34554 1.38629 1.38629 1.38629 1.38629
34555 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34556 43 0.12580 3.51085 2.88617 3.42515 43 - -
34557 1.38629 1.38629 1.38629 1.38629
34558 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34559 44 0.12580 3.51085 2.88617 3.42515 44 - -
34560 1.38629 1.38629 1.38629 1.38629
34561 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547
34562 45 3.58284 0.11369 3.62571 2.93680 45 - -
34563 1.38629 1.38629 1.38629 1.38629
34564 0.01721 4.07089 * 1.46634 0.26236 0.00000 *
34565 //
34566 HMMER3/b [3.0 | March 2010]
34567 NAME 2_5.8_Metazoa_58S_start_twentytwo_long
34568 LENG 45
34569 ALPH DNA
34570 RF no
34571 CS no
34572 MAP yes
34573 DATE Fri Feb 24 23:26:26 2012
34574 NSEQ 7
34575 EFFN 3.243652
34576 CKSUM 1514906456
34577 STATS LOCAL MSV -7.9402 0.71932
34578 STATS LOCAL VITERBI -7.5897 0.71932
34579 STATS LOCAL FORWARD -4.2164 0.71932
34580 HMM A C G T
34581 m->m m->i m->d i->m i->i d->m d->d
34582 COMPO 1.16403 1.39200 1.52407 1.50791
34583 1.38629 1.38629 1.38629 1.38629
34584 0.03743 3.99704 3.99704 1.46634 0.26236 0.00000 *
34585 1 3.40354 0.13379 3.45424 2.80742 1 - -
34586 1.38629 1.38629 1.38629 1.38629
34587 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34588 2 0.14533 3.35462 2.78524 3.25387 2 - -
34589 1.38629 1.38629 1.38629 1.38629
34590 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34591 3 3.06280 2.57871 3.11194 0.18289 3 - -
34592 1.38629 1.38629 1.38629 1.38629
34593 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34594 4 3.40354 0.13379 3.45424 2.80742 4 - -
34595 1.38629 1.38629 1.38629 1.38629
34596 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34597 5 3.06280 2.57871 3.11194 0.18289 5 - -
34598 1.38629 1.38629 1.38629 1.38629
34599 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34600 6 3.06280 2.57871 3.11194 0.18289 6 - -
34601 1.38629 1.38629 1.38629 1.38629
34602 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34603 7 3.40354 0.13379 3.45424 2.80742 7 - -
34604 1.38629 1.38629 1.38629 1.38629
34605 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34606 8 0.14533 3.35462 2.78524 3.25387 8 - -
34607 1.38629 1.38629 1.38629 1.38629
34608 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34609 9 0.14533 3.35462 2.78524 3.25387 9 - -
34610 1.38629 1.38629 1.38629 1.38629
34611 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34612 10 2.92956 3.56167 0.12005 3.46366 10 - -
34613 1.38629 1.38629 1.38629 1.38629
34614 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34615 11 3.40354 0.13379 3.45424 2.80742 11 - -
34616 1.38629 1.38629 1.38629 1.38629
34617 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34618 12 2.92956 3.56167 0.12005 3.46366 12 - -
34619 1.38629 1.38629 1.38629 1.38629
34620 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34621 13 2.92956 3.56167 0.12005 3.46366 13 - -
34622 1.38629 1.38629 1.38629 1.38629
34623 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34624 14 3.06280 2.57871 3.11194 0.18289 14 - -
34625 1.38629 1.38629 1.38629 1.38629
34626 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34627 15 2.92956 3.56167 0.12005 3.46366 15 - -
34628 1.38629 1.38629 1.38629 1.38629
34629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34630 16 2.92956 3.56167 0.12005 3.46366 16 - -
34631 1.38629 1.38629 1.38629 1.38629
34632 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34633 17 0.14533 3.35462 2.78524 3.25387 17 - -
34634 1.38629 1.38629 1.38629 1.38629
34635 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34636 18 3.06280 2.57871 3.11194 0.18289 18 - -
34637 1.38629 1.38629 1.38629 1.38629
34638 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34639 19 3.40354 0.13379 3.45424 2.80742 19 - -
34640 1.38629 1.38629 1.38629 1.38629
34641 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34642 20 0.14533 3.35462 2.78524 3.25387 20 - -
34643 1.38629 1.38629 1.38629 1.38629
34644 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34645 21 3.40354 0.13379 3.45424 2.80742 21 - -
34646 1.38629 1.38629 1.38629 1.38629
34647 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34648 22 3.06280 2.57871 3.11194 0.18289 22 - -
34649 1.38629 1.38629 1.38629 1.38629
34650 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34651 23 3.40354 0.13379 3.45424 2.80742 23 - -
34652 1.38629 1.38629 1.38629 1.38629
34653 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34654 24 2.92956 3.56167 0.12005 3.46366 24 - -
34655 1.38629 1.38629 1.38629 1.38629
34656 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34657 25 0.14533 3.35462 2.78524 3.25387 25 - -
34658 1.38629 1.38629 1.38629 1.38629
34659 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34660 26 0.14533 3.35462 2.78524 3.25387 26 - -
34661 1.38629 1.38629 1.38629 1.38629
34662 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34663 27 3.06280 2.57871 3.11194 0.18289 27 - -
34664 1.38629 1.38629 1.38629 1.38629
34665 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34666 28 3.06280 2.57871 3.11194 0.18289 28 - -
34667 1.38629 1.38629 1.38629 1.38629
34668 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34669 29 0.14533 3.35462 2.78524 3.25387 29 - -
34670 1.38629 1.38629 1.38629 1.38629
34671 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34672 30 3.40354 0.13379 3.45424 2.80742 30 - -
34673 1.38629 1.38629 1.38629 1.38629
34674 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34675 31 3.40354 0.13379 3.45424 2.80742 31 - -
34676 1.38629 1.38629 1.38629 1.38629
34677 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34678 32 0.14533 3.35462 2.78524 3.25387 32 - -
34679 1.38629 1.38629 1.38629 1.38629
34680 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34681 33 0.14533 3.35462 2.78524 3.25387 33 - -
34682 1.38629 1.38629 1.38629 1.38629
34683 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34684 34 3.06280 2.57871 3.11194 0.18289 34 - -
34685 1.38629 1.38629 1.38629 1.38629
34686 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34687 35 3.40354 0.13379 3.45424 2.80742 35 - -
34688 1.38629 1.38629 1.38629 1.38629
34689 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34690 36 2.92956 3.56167 0.12005 3.46366 36 - -
34691 1.38629 1.38629 1.38629 1.38629
34692 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34693 37 0.14533 3.35462 2.78524 3.25387 37 - -
34694 1.38629 1.38629 1.38629 1.38629
34695 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34696 38 3.06280 2.57871 3.11194 0.18289 38 - -
34697 1.38629 1.38629 1.38629 1.38629
34698 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34699 39 2.92956 3.56167 0.12005 3.46366 39 - -
34700 1.38629 1.38629 1.38629 1.38629
34701 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34702 40 0.14533 3.35462 2.78524 3.25387 40 - -
34703 1.38629 1.38629 1.38629 1.38629
34704 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34705 41 0.14533 3.35462 2.78524 3.25387 41 - -
34706 1.38629 1.38629 1.38629 1.38629
34707 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34708 42 2.92956 3.56167 0.12005 3.46366 42 - -
34709 1.38629 1.38629 1.38629 1.38629
34710 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34711 43 0.14533 3.35462 2.78524 3.25387 43 - -
34712 1.38629 1.38629 1.38629 1.38629
34713 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34714 44 0.14533 3.35462 2.78524 3.25387 44 - -
34715 1.38629 1.38629 1.38629 1.38629
34716 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547
34717 45 3.40354 0.13379 3.45424 2.80742 45 - -
34718 1.38629 1.38629 1.38629 1.38629
34719 0.01889 3.97849 * 1.46634 0.26236 0.00000 *
34720 //
34721 HMMER3/b [3.0 | March 2010]
34722 NAME 2_5.8_Metazoa_58S_start_two_long
34723 LENG 45
34724 ALPH DNA
34725 RF no
34726 CS no
34727 MAP yes
34728 DATE Fri Feb 24 23:13:55 2012
34729 NSEQ 14
34730 EFFN 3.270996
34731 CKSUM 1407752784
34732 STATS LOCAL MSV -8.0890 0.71933
34733 STATS LOCAL VITERBI -7.5797 0.71933
34734 STATS LOCAL FORWARD -4.1354 0.71933
34735 HMM A C G T
34736 m->m m->i m->d i->m i->i d->m d->d
34737 COMPO 1.39927 1.44999 1.19129 1.53795
34738 1.38629 1.38629 1.38629 1.38629
34739 0.03724 4.00205 4.00205 1.46634 0.26236 0.00000 *
34740 1 2.46772 1.29197 2.53721 0.57731 1 - -
34741 1.38629 1.38629 1.38629 1.38629
34742 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34743 2 3.41386 0.13253 3.46414 2.81497 2 - -
34744 1.38629 1.38629 1.38629 1.38629
34745 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34746 3 0.14412 3.36357 2.79107 3.26366 3 - -
34747 1.38629 1.38629 1.38629 1.38629
34748 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34749 4 3.07179 2.58444 3.12059 0.18141 4 - -
34750 1.38629 1.38629 1.38629 1.38629
34751 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34752 5 3.07179 2.58444 3.12059 0.18141 5 - -
34753 1.38629 1.38629 1.38629 1.38629
34754 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34755 6 3.41386 0.13253 3.46414 2.81497 6 - -
34756 1.38629 1.38629 1.38629 1.38629
34757 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34758 7 3.07179 2.58444 3.12059 0.18141 7 - -
34759 1.38629 1.38629 1.38629 1.38629
34760 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34761 8 0.14412 3.36357 2.79107 3.26366 8 - -
34762 1.38629 1.38629 1.38629 1.38629
34763 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34764 9 0.14412 3.36357 2.79107 3.26366 9 - -
34765 1.38629 1.38629 1.38629 1.38629
34766 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34767 10 2.93585 3.57079 0.11903 3.47371 10 - -
34768 1.38629 1.38629 1.38629 1.38629
34769 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34770 11 3.41386 0.13253 3.46414 2.81497 11 - -
34771 1.38629 1.38629 1.38629 1.38629
34772 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34773 12 2.93585 3.57079 0.11903 3.47371 12 - -
34774 1.38629 1.38629 1.38629 1.38629
34775 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34776 13 2.93585 3.57079 0.11903 3.47371 13 - -
34777 1.38629 1.38629 1.38629 1.38629
34778 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34779 14 3.07179 2.58444 3.12059 0.18141 14 - -
34780 1.38629 1.38629 1.38629 1.38629
34781 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34782 15 2.93585 3.57079 0.11903 3.47371 15 - -
34783 1.38629 1.38629 1.38629 1.38629
34784 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34785 16 2.93585 3.57079 0.11903 3.47371 16 - -
34786 1.38629 1.38629 1.38629 1.38629
34787 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34788 17 0.14412 3.36357 2.79107 3.26366 17 - -
34789 1.38629 1.38629 1.38629 1.38629
34790 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34791 18 3.07179 2.58444 3.12059 0.18141 18 - -
34792 1.38629 1.38629 1.38629 1.38629
34793 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34794 19 3.41386 0.13253 3.46414 2.81497 19 - -
34795 1.38629 1.38629 1.38629 1.38629
34796 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34797 20 0.14412 3.36357 2.79107 3.26366 20 - -
34798 1.38629 1.38629 1.38629 1.38629
34799 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34800 21 3.41386 0.13253 3.46414 2.81497 21 - -
34801 1.38629 1.38629 1.38629 1.38629
34802 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34803 22 3.07179 2.58444 3.12059 0.18141 22 - -
34804 1.38629 1.38629 1.38629 1.38629
34805 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34806 23 0.14412 3.36357 2.79107 3.26366 23 - -
34807 1.38629 1.38629 1.38629 1.38629
34808 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34809 24 2.93585 3.57079 0.11903 3.47371 24 - -
34810 1.38629 1.38629 1.38629 1.38629
34811 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34812 25 2.93585 3.57079 0.11903 3.47371 25 - -
34813 1.38629 1.38629 1.38629 1.38629
34814 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34815 26 3.41386 0.13253 3.46414 2.81497 26 - -
34816 1.38629 1.38629 1.38629 1.38629
34817 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34818 27 3.07179 2.58444 3.12059 0.18141 27 - -
34819 1.38629 1.38629 1.38629 1.38629
34820 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34821 28 3.41386 0.13253 3.46414 2.81497 28 - -
34822 1.38629 1.38629 1.38629 1.38629
34823 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34824 29 2.93585 3.57079 0.11903 3.47371 29 - -
34825 1.38629 1.38629 1.38629 1.38629
34826 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34827 30 3.41386 0.13253 3.46414 2.81497 30 - -
34828 1.38629 1.38629 1.38629 1.38629
34829 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34830 31 2.93585 3.57079 0.11903 3.47371 31 - -
34831 1.38629 1.38629 1.38629 1.38629
34832 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34833 32 2.93585 3.57079 0.11903 3.47371 32 - -
34834 1.38629 1.38629 1.38629 1.38629
34835 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34836 33 2.93585 3.57079 0.11903 3.47371 33 - -
34837 1.38629 1.38629 1.38629 1.38629
34838 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34839 34 3.07179 2.58444 3.12059 0.18141 34 - -
34840 1.38629 1.38629 1.38629 1.38629
34841 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34842 35 3.41386 0.13253 3.46414 2.81497 35 - -
34843 1.38629 1.38629 1.38629 1.38629
34844 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34845 36 2.93585 3.57079 0.11903 3.47371 36 - -
34846 1.38629 1.38629 1.38629 1.38629
34847 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34848 37 0.14412 3.36357 2.79107 3.26366 37 - -
34849 1.38629 1.38629 1.38629 1.38629
34850 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34851 38 3.07179 2.58444 3.12059 0.18141 38 - -
34852 1.38629 1.38629 1.38629 1.38629
34853 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34854 39 2.93585 3.57079 0.11903 3.47371 39 - -
34855 1.38629 1.38629 1.38629 1.38629
34856 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34857 40 0.14412 3.36357 2.79107 3.26366 40 - -
34858 1.38629 1.38629 1.38629 1.38629
34859 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34860 41 0.14412 3.36357 2.79107 3.26366 41 - -
34861 1.38629 1.38629 1.38629 1.38629
34862 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34863 42 2.93585 3.57079 0.11903 3.47371 42 - -
34864 1.38629 1.38629 1.38629 1.38629
34865 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34866 43 0.14412 3.36357 2.79107 3.26366 43 - -
34867 1.38629 1.38629 1.38629 1.38629
34868 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34869 44 0.14412 3.36357 2.79107 3.26366 44 - -
34870 1.38629 1.38629 1.38629 1.38629
34871 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547
34872 45 3.41386 0.13253 3.46414 2.81497 45 - -
34873 1.38629 1.38629 1.38629 1.38629
34874 0.01879 3.98360 * 1.46634 0.26236 0.00000 *
34875 //
34876 HMMER3/b [3.0 | March 2010]
34877 NAME 4_LSU_Metazoa_4_LSU_start_eighta_long
34878 LENG 45
34879 ALPH DNA
34880 RF no
34881 CS no
34882 MAP yes
34883 DATE Mon Feb 27 22:56:10 2012
34884 NSEQ 23
34885 EFFN 3.433716
34886 CKSUM 4182898010
34887 STATS LOCAL MSV -7.6415 0.71931
34888 STATS LOCAL VITERBI -7.6023 0.71931
34889 STATS LOCAL FORWARD -3.9207 0.71931
34890 HMM A C G T
34891 m->m m->i m->d i->m i->i d->m d->d
34892 COMPO 1.12569 1.21534 1.78132 1.55804
34893 1.38629 1.38629 1.38629 1.38629
34894 0.03615 4.03135 4.03135 1.46634 0.26236 0.00000 *
34895 1 3.12398 2.61761 3.17077 0.17308 1 - -
34896 1.38629 1.38629 1.38629 1.38629
34897 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34898 2 3.12398 2.61761 3.17077 0.17308 2 - -
34899 1.38629 1.38629 1.38629 1.38629
34900 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34901 3 0.13737 3.41516 2.82454 3.32015 3 - -
34902 1.38629 1.38629 1.38629 1.38629
34903 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34904 4 3.47328 0.12552 3.52102 2.85815 4 - -
34905 1.38629 1.38629 1.38629 1.38629
34906 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34907 5 2.97172 3.62305 0.11337 3.53141 5 - -
34908 1.38629 1.38629 1.38629 1.38629
34909 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34910 6 0.13737 3.41516 2.82454 3.32015 6 - -
34911 1.38629 1.38629 1.38629 1.38629
34912 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34913 7 3.47328 0.12552 3.52102 2.85815 7 - -
34914 1.38629 1.38629 1.38629 1.38629
34915 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34916 8 3.47328 0.12552 3.52102 2.85815 8 - -
34917 1.38629 1.38629 1.38629 1.38629
34918 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34919 9 3.12398 2.61761 3.17077 0.17308 9 - -
34920 1.38629 1.38629 1.38629 1.38629
34921 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34922 10 3.47328 0.12552 3.52102 2.85815 10 - -
34923 1.38629 1.38629 1.38629 1.38629
34924 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34925 11 0.13737 3.41516 2.82454 3.32015 11 - -
34926 1.38629 1.38629 1.38629 1.38629
34927 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34928 12 0.13737 3.41516 2.82454 3.32015 12 - -
34929 1.38629 1.38629 1.38629 1.38629
34930 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34931 13 3.47328 0.12552 3.52102 2.85815 13 - -
34932 1.38629 1.38629 1.38629 1.38629
34933 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34934 14 3.12398 2.61761 3.17077 0.17308 14 - -
34935 1.38629 1.38629 1.38629 1.38629
34936 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34937 15 3.47328 0.12552 3.52102 2.85815 15 - -
34938 1.38629 1.38629 1.38629 1.38629
34939 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34940 16 0.13737 3.41516 2.82454 3.32015 16 - -
34941 1.38629 1.38629 1.38629 1.38629
34942 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34943 17 0.13737 3.41516 2.82454 3.32015 17 - -
34944 1.38629 1.38629 1.38629 1.38629
34945 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34946 18 2.97172 3.62305 0.11337 3.53141 18 - -
34947 1.38629 1.38629 1.38629 1.38629
34948 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34949 19 3.47328 0.12552 3.52102 2.85815 19 - -
34950 1.38629 1.38629 1.38629 1.38629
34951 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34952 20 0.13737 3.41516 2.82454 3.32015 20 - -
34953 1.38629 1.38629 1.38629 1.38629
34954 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34955 21 0.13737 3.41516 2.82454 3.32015 21 - -
34956 1.38629 1.38629 1.38629 1.38629
34957 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34958 22 2.97172 3.62305 0.11337 3.53141 22 - -
34959 1.38629 1.38629 1.38629 1.38629
34960 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34961 23 0.46297 2.69963 1.48594 2.56304 23 - -
34962 1.38629 1.38629 1.38629 1.38629
34963 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34964 24 2.73503 0.38530 2.80315 1.63866 24 - -
34965 1.38629 1.38629 1.38629 1.38629
34966 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34967 25 3.12398 2.61761 3.17077 0.17308 25 - -
34968 1.38629 1.38629 1.38629 1.38629
34969 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34970 26 0.13737 3.41516 2.82454 3.32015 26 - -
34971 1.38629 1.38629 1.38629 1.38629
34972 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34973 27 3.47328 0.12552 3.52102 2.85815 27 - -
34974 1.38629 1.38629 1.38629 1.38629
34975 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34976 28 3.47328 0.12552 3.52102 2.85815 28 - -
34977 1.38629 1.38629 1.38629 1.38629
34978 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34979 29 3.47328 0.12552 3.52102 2.85815 29 - -
34980 1.38629 1.38629 1.38629 1.38629
34981 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34982 30 2.97172 3.62305 0.11337 3.53141 30 - -
34983 1.38629 1.38629 1.38629 1.38629
34984 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34985 31 3.47328 0.12552 3.52102 2.85815 31 - -
34986 1.38629 1.38629 1.38629 1.38629
34987 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34988 32 3.12398 2.61761 3.17077 0.17308 32 - -
34989 1.38629 1.38629 1.38629 1.38629
34990 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34991 33 2.97172 3.62305 0.11337 3.53141 33 - -
34992 1.38629 1.38629 1.38629 1.38629
34993 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34994 34 0.13737 3.41516 2.82454 3.32015 34 - -
34995 1.38629 1.38629 1.38629 1.38629
34996 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
34997 35 0.13737 3.41516 2.82454 3.32015 35 - -
34998 1.38629 1.38629 1.38629 1.38629
34999 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
35000 36 3.47328 0.12552 3.52102 2.85815 36 - -
35001 1.38629 1.38629 1.38629 1.38629
35002 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
35003 37 3.12398 2.61761 3.17077 0.17308 37 - -
35004 1.38629 1.38629 1.38629 1.38629
35005 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
35006 38 3.12398 2.61761 3.17077 0.17308 38 - -
35007 1.38629 1.38629 1.38629 1.38629
35008 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
35009 39 0.13737 3.41516 2.82454 3.32015 39 - -
35010 1.38629 1.38629 1.38629 1.38629
35011 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
35012 40 0.13737 3.41516 2.82454 3.32015 40 - -
35013 1.38629 1.38629 1.38629 1.38629
35014 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
35015 41 2.97172 3.62305 0.11337 3.53141 41 - -
35016 1.38629 1.38629 1.38629 1.38629
35017 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
35018 42 3.47328 0.12552 3.52102 2.85815 42 - -
35019 1.38629 1.38629 1.38629 1.38629
35020 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
35021 43 0.13737 3.41516 2.82454 3.32015 43 - -
35022 1.38629 1.38629 1.38629 1.38629
35023 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
35024 44 3.12398 2.61761 3.17077 0.17308 44 - -
35025 1.38629 1.38629 1.38629 1.38629
35026 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
35027 45 0.13737 3.41516 2.82454 3.32015 45 - -
35028 1.38629 1.38629 1.38629 1.38629
35029 0.01824 4.01344 * 1.46634 0.26236 0.00000 *
35030 //
35031 HMMER3/b [3.0 | March 2010]
35032 NAME 4_LSU_Metazoa_4_LSU_start_eightc_long
35033 LENG 45
35034 ALPH DNA
35035 RF no
35036 CS no
35037 MAP yes
35038 DATE Mon Feb 27 22:56:19 2012
35039 NSEQ 2
35040 EFFN 2.000000
35041 CKSUM 1363592007
35042 STATS LOCAL MSV -7.2798 0.72798
35043 STATS LOCAL VITERBI -8.2533 0.72798
35044 STATS LOCAL FORWARD -3.3804 0.72798
35045 HMM A C G T
35046 m->m m->i m->d i->m i->i d->m d->d
35047 COMPO 1.24362 1.24172 1.56866 1.53968
35048 1.38629 1.38629 1.38629 1.38629
35049 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
35050 1 2.57915 2.25909 2.64442 0.28946 1 - -
35051 1.38629 1.38629 1.38629 1.38629
35052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35053 2 2.57915 2.25909 2.64442 0.28946 2 - -
35054 1.38629 1.38629 1.38629 1.38629
35055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35056 3 2.53331 3.02441 0.20344 2.88069 3 - -
35057 1.38629 1.38629 1.38629 1.38629
35058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35059 4 2.81865 0.23582 2.88868 2.35662 4 - -
35060 1.38629 1.38629 1.38629 1.38629
35061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35062 5 2.53331 3.02441 0.20344 2.88069 5 - -
35063 1.38629 1.38629 1.38629 1.38629
35064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35065 6 0.23862 2.84929 2.43386 2.70756 6 - -
35066 1.38629 1.38629 1.38629 1.38629
35067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35068 7 2.81865 0.23582 2.88868 2.35662 7 - -
35069 1.38629 1.38629 1.38629 1.38629
35070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35071 8 2.81865 0.23582 2.88868 2.35662 8 - -
35072 1.38629 1.38629 1.38629 1.38629
35073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35074 9 2.57915 2.25909 2.64442 0.28946 9 - -
35075 1.38629 1.38629 1.38629 1.38629
35076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35077 10 2.81865 0.23582 2.88868 2.35662 10 - -
35078 1.38629 1.38629 1.38629 1.38629
35079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35080 11 0.23862 2.84929 2.43386 2.70756 11 - -
35081 1.38629 1.38629 1.38629 1.38629
35082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35083 12 0.23862 2.84929 2.43386 2.70756 12 - -
35084 1.38629 1.38629 1.38629 1.38629
35085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35086 13 2.81865 0.23582 2.88868 2.35662 13 - -
35087 1.38629 1.38629 1.38629 1.38629
35088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35089 14 2.57915 2.25909 2.64442 0.28946 14 - -
35090 1.38629 1.38629 1.38629 1.38629
35091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35092 15 2.81865 0.23582 2.88868 2.35662 15 - -
35093 1.38629 1.38629 1.38629 1.38629
35094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35095 16 0.23862 2.84929 2.43386 2.70756 16 - -
35096 1.38629 1.38629 1.38629 1.38629
35097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35098 17 0.23862 2.84929 2.43386 2.70756 17 - -
35099 1.38629 1.38629 1.38629 1.38629
35100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35101 18 2.53331 3.02441 0.20344 2.88069 18 - -
35102 1.38629 1.38629 1.38629 1.38629
35103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35104 19 2.81865 0.23582 2.88868 2.35662 19 - -
35105 1.38629 1.38629 1.38629 1.38629
35106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35107 20 0.23862 2.84929 2.43386 2.70756 20 - -
35108 1.38629 1.38629 1.38629 1.38629
35109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35110 21 0.23862 2.84929 2.43386 2.70756 21 - -
35111 1.38629 1.38629 1.38629 1.38629
35112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35113 22 2.53331 3.02441 0.20344 2.88069 22 - -
35114 1.38629 1.38629 1.38629 1.38629
35115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35116 23 2.53331 3.02441 0.20344 2.88069 23 - -
35117 1.38629 1.38629 1.38629 1.38629
35118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35119 24 2.81865 0.23582 2.88868 2.35662 24 - -
35120 1.38629 1.38629 1.38629 1.38629
35121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35122 25 2.57915 2.25909 2.64442 0.28946 25 - -
35123 1.38629 1.38629 1.38629 1.38629
35124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35125 26 0.23862 2.84929 2.43386 2.70756 26 - -
35126 1.38629 1.38629 1.38629 1.38629
35127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35128 27 2.81865 0.23582 2.88868 2.35662 27 - -
35129 1.38629 1.38629 1.38629 1.38629
35130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35131 28 2.81865 0.23582 2.88868 2.35662 28 - -
35132 1.38629 1.38629 1.38629 1.38629
35133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35134 29 2.81865 0.23582 2.88868 2.35662 29 - -
35135 1.38629 1.38629 1.38629 1.38629
35136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35137 30 2.53331 3.02441 0.20344 2.88069 30 - -
35138 1.38629 1.38629 1.38629 1.38629
35139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35140 31 2.81865 0.23582 2.88868 2.35662 31 - -
35141 1.38629 1.38629 1.38629 1.38629
35142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35143 32 2.57915 2.25909 2.64442 0.28946 32 - -
35144 1.38629 1.38629 1.38629 1.38629
35145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35146 33 2.53331 3.02441 0.20344 2.88069 33 - -
35147 1.38629 1.38629 1.38629 1.38629
35148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35149 34 0.23862 2.84929 2.43386 2.70756 34 - -
35150 1.38629 1.38629 1.38629 1.38629
35151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35152 35 0.23862 2.84929 2.43386 2.70756 35 - -
35153 1.38629 1.38629 1.38629 1.38629
35154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35155 36 2.81865 0.23582 2.88868 2.35662 36 - -
35156 1.38629 1.38629 1.38629 1.38629
35157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35158 37 2.57915 2.25909 2.64442 0.28946 37 - -
35159 1.38629 1.38629 1.38629 1.38629
35160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35161 38 2.57915 2.25909 2.64442 0.28946 38 - -
35162 1.38629 1.38629 1.38629 1.38629
35163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35164 39 0.23862 2.84929 2.43386 2.70756 39 - -
35165 1.38629 1.38629 1.38629 1.38629
35166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35167 40 0.23862 2.84929 2.43386 2.70756 40 - -
35168 1.38629 1.38629 1.38629 1.38629
35169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35170 41 2.53331 3.02441 0.20344 2.88069 41 - -
35171 1.38629 1.38629 1.38629 1.38629
35172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35173 42 2.81865 0.23582 2.88868 2.35662 42 - -
35174 1.38629 1.38629 1.38629 1.38629
35175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35176 43 0.23862 2.84929 2.43386 2.70756 43 - -
35177 1.38629 1.38629 1.38629 1.38629
35178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35179 44 2.57915 2.25909 2.64442 0.28946 44 - -
35180 1.38629 1.38629 1.38629 1.38629
35181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35182 45 0.23862 2.84929 2.43386 2.70756 45 - -
35183 1.38629 1.38629 1.38629 1.38629
35184 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
35185 //
35186 HMMER3/b [3.0 | March 2010]
35187 NAME 4_LSU_Metazoa_4_LSU_start_eightd_long
35188 LENG 45
35189 ALPH DNA
35190 RF no
35191 CS no
35192 MAP yes
35193 DATE Mon Feb 27 22:56:26 2012
35194 NSEQ 2
35195 EFFN 2.000000
35196 CKSUM 1020504900
35197 STATS LOCAL MSV -7.5516 0.72962
35198 STATS LOCAL VITERBI -8.2423 0.72962
35199 STATS LOCAL FORWARD -3.4571 0.72962
35200 HMM A C G T
35201 m->m m->i m->d i->m i->i d->m d->d
35202 COMPO 1.19990 1.38841 1.59960 1.39705
35203 1.38629 1.38629 1.38629 1.38629
35204 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
35205 1 2.57915 2.25909 2.64442 0.28946 1 - -
35206 1.38629 1.38629 1.38629 1.38629
35207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35208 2 2.57915 2.25909 2.64442 0.28946 2 - -
35209 1.38629 1.38629 1.38629 1.38629
35210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35211 3 2.53331 3.02441 0.20344 2.88069 3 - -
35212 1.38629 1.38629 1.38629 1.38629
35213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35214 4 2.81865 0.23582 2.88868 2.35662 4 - -
35215 1.38629 1.38629 1.38629 1.38629
35216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35217 5 2.53331 3.02441 0.20344 2.88069 5 - -
35218 1.38629 1.38629 1.38629 1.38629
35219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35220 6 0.23862 2.84929 2.43386 2.70756 6 - -
35221 1.38629 1.38629 1.38629 1.38629
35222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35223 7 2.81865 0.23582 2.88868 2.35662 7 - -
35224 1.38629 1.38629 1.38629 1.38629
35225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35226 8 2.81865 0.23582 2.88868 2.35662 8 - -
35227 1.38629 1.38629 1.38629 1.38629
35228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35229 9 2.57915 2.25909 2.64442 0.28946 9 - -
35230 1.38629 1.38629 1.38629 1.38629
35231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35232 10 2.81865 0.23582 2.88868 2.35662 10 - -
35233 1.38629 1.38629 1.38629 1.38629
35234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35235 11 0.23862 2.84929 2.43386 2.70756 11 - -
35236 1.38629 1.38629 1.38629 1.38629
35237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35238 12 0.23862 2.84929 2.43386 2.70756 12 - -
35239 1.38629 1.38629 1.38629 1.38629
35240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35241 13 2.57915 2.25909 2.64442 0.28946 13 - -
35242 1.38629 1.38629 1.38629 1.38629
35243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35244 14 2.57915 2.25909 2.64442 0.28946 14 - -
35245 1.38629 1.38629 1.38629 1.38629
35246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35247 15 2.57915 2.25909 2.64442 0.28946 15 - -
35248 1.38629 1.38629 1.38629 1.38629
35249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35250 16 0.23862 2.84929 2.43386 2.70756 16 - -
35251 1.38629 1.38629 1.38629 1.38629
35252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35253 17 0.23862 2.84929 2.43386 2.70756 17 - -
35254 1.38629 1.38629 1.38629 1.38629
35255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35256 18 2.53331 3.02441 0.20344 2.88069 18 - -
35257 1.38629 1.38629 1.38629 1.38629
35258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35259 19 2.81865 0.23582 2.88868 2.35662 19 - -
35260 1.38629 1.38629 1.38629 1.38629
35261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35262 20 0.92825 2.28391 0.95698 2.13014 20 - -
35263 1.38629 1.38629 1.38629 1.38629
35264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35265 21 0.23862 2.84929 2.43386 2.70756 21 - -
35266 1.38629 1.38629 1.38629 1.38629
35267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35268 22 2.53331 3.02441 0.20344 2.88069 22 - -
35269 1.38629 1.38629 1.38629 1.38629
35270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35271 23 0.23862 2.84929 2.43386 2.70756 23 - -
35272 1.38629 1.38629 1.38629 1.38629
35273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35274 24 0.23862 2.84929 2.43386 2.70756 24 - -
35275 1.38629 1.38629 1.38629 1.38629
35276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35277 25 2.57915 2.25909 2.64442 0.28946 25 - -
35278 1.38629 1.38629 1.38629 1.38629
35279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35280 26 0.23862 2.84929 2.43386 2.70756 26 - -
35281 1.38629 1.38629 1.38629 1.38629
35282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35283 27 2.81865 0.23582 2.88868 2.35662 27 - -
35284 1.38629 1.38629 1.38629 1.38629
35285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35286 28 2.81865 0.23582 2.88868 2.35662 28 - -
35287 1.38629 1.38629 1.38629 1.38629
35288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35289 29 2.81865 0.23582 2.88868 2.35662 29 - -
35290 1.38629 1.38629 1.38629 1.38629
35291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35292 30 2.53331 3.02441 0.20344 2.88069 30 - -
35293 1.38629 1.38629 1.38629 1.38629
35294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35295 31 2.81865 0.23582 2.88868 2.35662 31 - -
35296 1.38629 1.38629 1.38629 1.38629
35297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35298 32 2.57915 2.25909 2.64442 0.28946 32 - -
35299 1.38629 1.38629 1.38629 1.38629
35300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35301 33 2.53331 3.02441 0.20344 2.88069 33 - -
35302 1.38629 1.38629 1.38629 1.38629
35303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35304 34 0.23862 2.84929 2.43386 2.70756 34 - -
35305 1.38629 1.38629 1.38629 1.38629
35306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35307 35 0.23862 2.84929 2.43386 2.70756 35 - -
35308 1.38629 1.38629 1.38629 1.38629
35309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35310 36 2.81865 0.23582 2.88868 2.35662 36 - -
35311 1.38629 1.38629 1.38629 1.38629
35312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35313 37 2.57915 2.25909 2.64442 0.28946 37 - -
35314 1.38629 1.38629 1.38629 1.38629
35315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35316 38 2.57915 2.25909 2.64442 0.28946 38 - -
35317 1.38629 1.38629 1.38629 1.38629
35318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35319 39 0.23862 2.84929 2.43386 2.70756 39 - -
35320 1.38629 1.38629 1.38629 1.38629
35321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35322 40 1.03732 1.95876 1.96551 1.00928 40 - -
35323 1.38629 1.38629 1.38629 1.38629
35324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35325 41 2.53331 3.02441 0.20344 2.88069 41 - -
35326 1.38629 1.38629 1.38629 1.38629
35327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35328 42 2.81865 0.23582 2.88868 2.35662 42 - -
35329 1.38629 1.38629 1.38629 1.38629
35330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35331 43 0.23862 2.84929 2.43386 2.70756 43 - -
35332 1.38629 1.38629 1.38629 1.38629
35333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35334 44 2.57915 2.25909 2.64442 0.28946 44 - -
35335 1.38629 1.38629 1.38629 1.38629
35336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35337 45 0.23862 2.84929 2.43386 2.70756 45 - -
35338 1.38629 1.38629 1.38629 1.38629
35339 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
35340 //
35341 HMMER3/b [3.0 | March 2010]
35342 NAME 4_LSU_Metazoa_4_LSU_start_eighte_long
35343 LENG 45
35344 ALPH DNA
35345 RF no
35346 CS no
35347 MAP yes
35348 DATE Mon Feb 27 22:56:33 2012
35349 NSEQ 2
35350 EFFN 2.000000
35351 CKSUM 868517852
35352 STATS LOCAL MSV -7.3772 0.72815
35353 STATS LOCAL VITERBI -8.2352 0.72815
35354 STATS LOCAL FORWARD -3.3266 0.72815
35355 HMM A C G T
35356 m->m m->i m->d i->m i->i d->m d->d
35357 COMPO 1.14885 1.24042 1.72116 1.53769
35358 1.38629 1.38629 1.38629 1.38629
35359 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
35360 1 2.57915 2.25909 2.64442 0.28946 1 - -
35361 1.38629 1.38629 1.38629 1.38629
35362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35363 2 2.57915 2.25909 2.64442 0.28946 2 - -
35364 1.38629 1.38629 1.38629 1.38629
35365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35366 3 0.23862 2.84929 2.43386 2.70756 3 - -
35367 1.38629 1.38629 1.38629 1.38629
35368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35369 4 2.81865 0.23582 2.88868 2.35662 4 - -
35370 1.38629 1.38629 1.38629 1.38629
35371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35372 5 2.53331 3.02441 0.20344 2.88069 5 - -
35373 1.38629 1.38629 1.38629 1.38629
35374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35375 6 0.23862 2.84929 2.43386 2.70756 6 - -
35376 1.38629 1.38629 1.38629 1.38629
35377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35378 7 2.81865 0.23582 2.88868 2.35662 7 - -
35379 1.38629 1.38629 1.38629 1.38629
35380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35381 8 2.81865 0.23582 2.88868 2.35662 8 - -
35382 1.38629 1.38629 1.38629 1.38629
35383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35384 9 2.57915 2.25909 2.64442 0.28946 9 - -
35385 1.38629 1.38629 1.38629 1.38629
35386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35387 10 2.81865 0.23582 2.88868 2.35662 10 - -
35388 1.38629 1.38629 1.38629 1.38629
35389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35390 11 0.23862 2.84929 2.43386 2.70756 11 - -
35391 1.38629 1.38629 1.38629 1.38629
35392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35393 12 0.23862 2.84929 2.43386 2.70756 12 - -
35394 1.38629 1.38629 1.38629 1.38629
35395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35396 13 2.81865 0.23582 2.88868 2.35662 13 - -
35397 1.38629 1.38629 1.38629 1.38629
35398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35399 14 2.57915 2.25909 2.64442 0.28946 14 - -
35400 1.38629 1.38629 1.38629 1.38629
35401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35402 15 2.81865 0.23582 2.88868 2.35662 15 - -
35403 1.38629 1.38629 1.38629 1.38629
35404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35405 16 0.23862 2.84929 2.43386 2.70756 16 - -
35406 1.38629 1.38629 1.38629 1.38629
35407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35408 17 0.23862 2.84929 2.43386 2.70756 17 - -
35409 1.38629 1.38629 1.38629 1.38629
35410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35411 18 2.53331 3.02441 0.20344 2.88069 18 - -
35412 1.38629 1.38629 1.38629 1.38629
35413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35414 19 2.81865 0.23582 2.88868 2.35662 19 - -
35415 1.38629 1.38629 1.38629 1.38629
35416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35417 20 0.23862 2.84929 2.43386 2.70756 20 - -
35418 1.38629 1.38629 1.38629 1.38629
35419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35420 21 0.23862 2.84929 2.43386 2.70756 21 - -
35421 1.38629 1.38629 1.38629 1.38629
35422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35423 22 2.53331 3.02441 0.20344 2.88069 22 - -
35424 1.38629 1.38629 1.38629 1.38629
35425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35426 23 0.23862 2.84929 2.43386 2.70756 23 - -
35427 1.38629 1.38629 1.38629 1.38629
35428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35429 24 2.81865 0.23582 2.88868 2.35662 24 - -
35430 1.38629 1.38629 1.38629 1.38629
35431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35432 25 2.57915 2.25909 2.64442 0.28946 25 - -
35433 1.38629 1.38629 1.38629 1.38629
35434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35435 26 0.23862 2.84929 2.43386 2.70756 26 - -
35436 1.38629 1.38629 1.38629 1.38629
35437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35438 27 2.81865 0.23582 2.88868 2.35662 27 - -
35439 1.38629 1.38629 1.38629 1.38629
35440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35441 28 2.81865 0.23582 2.88868 2.35662 28 - -
35442 1.38629 1.38629 1.38629 1.38629
35443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35444 29 2.81865 0.23582 2.88868 2.35662 29 - -
35445 1.38629 1.38629 1.38629 1.38629
35446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35447 30 2.53331 3.02441 0.20344 2.88069 30 - -
35448 1.38629 1.38629 1.38629 1.38629
35449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35450 31 2.81865 0.23582 2.88868 2.35662 31 - -
35451 1.38629 1.38629 1.38629 1.38629
35452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35453 32 2.57915 2.25909 2.64442 0.28946 32 - -
35454 1.38629 1.38629 1.38629 1.38629
35455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35456 33 2.53331 3.02441 0.20344 2.88069 33 - -
35457 1.38629 1.38629 1.38629 1.38629
35458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35459 34 0.23862 2.84929 2.43386 2.70756 34 - -
35460 1.38629 1.38629 1.38629 1.38629
35461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35462 35 0.23862 2.84929 2.43386 2.70756 35 - -
35463 1.38629 1.38629 1.38629 1.38629
35464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35465 36 2.81865 0.23582 2.88868 2.35662 36 - -
35466 1.38629 1.38629 1.38629 1.38629
35467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35468 37 2.57915 2.25909 2.64442 0.28946 37 - -
35469 1.38629 1.38629 1.38629 1.38629
35470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35471 38 2.57915 2.25909 2.64442 0.28946 38 - -
35472 1.38629 1.38629 1.38629 1.38629
35473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35474 39 0.23862 2.84929 2.43386 2.70756 39 - -
35475 1.38629 1.38629 1.38629 1.38629
35476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35477 40 0.23862 2.84929 2.43386 2.70756 40 - -
35478 1.38629 1.38629 1.38629 1.38629
35479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35480 41 2.53331 3.02441 0.20344 2.88069 41 - -
35481 1.38629 1.38629 1.38629 1.38629
35482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35483 42 2.81865 0.23582 2.88868 2.35662 42 - -
35484 1.38629 1.38629 1.38629 1.38629
35485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35486 43 0.23862 2.84929 2.43386 2.70756 43 - -
35487 1.38629 1.38629 1.38629 1.38629
35488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35489 44 2.57915 2.25909 2.64442 0.28946 44 - -
35490 1.38629 1.38629 1.38629 1.38629
35491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35492 45 0.23862 2.84929 2.43386 2.70756 45 - -
35493 1.38629 1.38629 1.38629 1.38629
35494 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
35495 //
35496 HMMER3/b [3.0 | March 2010]
35497 NAME 4_LSU_Metazoa_4_LSU_start_eighteen_long
35498 LENG 45
35499 ALPH DNA
35500 RF no
35501 CS no
35502 MAP yes
35503 DATE Mon Feb 27 22:59:33 2012
35504 NSEQ 15
35505 EFFN 3.431396
35506 CKSUM 2285872056
35507 STATS LOCAL MSV -7.7397 0.71932
35508 STATS LOCAL VITERBI -7.5822 0.71932
35509 STATS LOCAL FORWARD -4.2073 0.71932
35510 HMM A C G T
35511 m->m m->i m->d i->m i->i d->m d->d
35512 COMPO 1.26609 1.33300 1.52381 1.44179
35513 1.38629 1.38629 1.38629 1.38629
35514 0.03616 4.03094 4.03094 1.46634 0.26236 0.00000 *
35515 1 2.68612 1.69220 2.74910 0.38015 1 - -
35516 1.38629 1.38629 1.38629 1.38629
35517 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35518 2 1.74335 0.46305 2.47031 2.19692 2 - -
35519 1.38629 1.38629 1.38629 1.38629
35520 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35521 3 3.12325 2.61715 3.17007 0.17319 3 - -
35522 1.38629 1.38629 1.38629 1.38629
35523 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35524 4 3.12325 2.61715 3.17007 0.17319 4 - -
35525 1.38629 1.38629 1.38629 1.38629
35526 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35527 5 2.97122 3.62232 0.11345 3.53061 5 - -
35528 1.38629 1.38629 1.38629 1.38629
35529 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35530 6 0.13746 3.41445 2.82408 3.31937 6 - -
35531 1.38629 1.38629 1.38629 1.38629
35532 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35533 7 3.47246 0.12561 3.52023 2.85755 7 - -
35534 1.38629 1.38629 1.38629 1.38629
35535 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35536 8 3.47246 0.12561 3.52023 2.85755 8 - -
35537 1.38629 1.38629 1.38629 1.38629
35538 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35539 9 3.12325 2.61715 3.17007 0.17319 9 - -
35540 1.38629 1.38629 1.38629 1.38629
35541 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35542 10 3.47246 0.12561 3.52023 2.85755 10 - -
35543 1.38629 1.38629 1.38629 1.38629
35544 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35545 11 0.13746 3.41445 2.82408 3.31937 11 - -
35546 1.38629 1.38629 1.38629 1.38629
35547 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35548 12 2.97122 3.62232 0.11345 3.53061 12 - -
35549 1.38629 1.38629 1.38629 1.38629
35550 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35551 13 0.13746 3.41445 2.82408 3.31937 13 - -
35552 1.38629 1.38629 1.38629 1.38629
35553 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35554 14 3.12325 2.61715 3.17007 0.17319 14 - -
35555 1.38629 1.38629 1.38629 1.38629
35556 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35557 15 3.47246 0.12561 3.52023 2.85755 15 - -
35558 1.38629 1.38629 1.38629 1.38629
35559 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35560 16 0.13746 3.41445 2.82408 3.31937 16 - -
35561 1.38629 1.38629 1.38629 1.38629
35562 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35563 17 2.97122 3.62232 0.11345 3.53061 17 - -
35564 1.38629 1.38629 1.38629 1.38629
35565 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35566 18 2.97122 3.62232 0.11345 3.53061 18 - -
35567 1.38629 1.38629 1.38629 1.38629
35568 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35569 19 3.47246 0.12561 3.52023 2.85755 19 - -
35570 1.38629 1.38629 1.38629 1.38629
35571 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35572 20 0.13746 3.41445 2.82408 3.31937 20 - -
35573 1.38629 1.38629 1.38629 1.38629
35574 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35575 21 0.13746 3.41445 2.82408 3.31937 21 - -
35576 1.38629 1.38629 1.38629 1.38629
35577 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35578 22 2.97122 3.62232 0.11345 3.53061 22 - -
35579 1.38629 1.38629 1.38629 1.38629
35580 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35581 23 2.97122 3.62232 0.11345 3.53061 23 - -
35582 1.38629 1.38629 1.38629 1.38629
35583 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35584 24 3.47246 0.12561 3.52023 2.85755 24 - -
35585 1.38629 1.38629 1.38629 1.38629
35586 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35587 25 3.12325 2.61715 3.17007 0.17319 25 - -
35588 1.38629 1.38629 1.38629 1.38629
35589 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35590 26 0.13746 3.41445 2.82408 3.31937 26 - -
35591 1.38629 1.38629 1.38629 1.38629
35592 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35593 27 3.47246 0.12561 3.52023 2.85755 27 - -
35594 1.38629 1.38629 1.38629 1.38629
35595 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35596 28 3.47246 0.12561 3.52023 2.85755 28 - -
35597 1.38629 1.38629 1.38629 1.38629
35598 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35599 29 3.47246 0.12561 3.52023 2.85755 29 - -
35600 1.38629 1.38629 1.38629 1.38629
35601 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35602 30 2.97122 3.62232 0.11345 3.53061 30 - -
35603 1.38629 1.38629 1.38629 1.38629
35604 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35605 31 3.47246 0.12561 3.52023 2.85755 31 - -
35606 1.38629 1.38629 1.38629 1.38629
35607 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35608 32 3.12325 2.61715 3.17007 0.17319 32 - -
35609 1.38629 1.38629 1.38629 1.38629
35610 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35611 33 2.97122 3.62232 0.11345 3.53061 33 - -
35612 1.38629 1.38629 1.38629 1.38629
35613 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35614 34 0.13746 3.41445 2.82408 3.31937 34 - -
35615 1.38629 1.38629 1.38629 1.38629
35616 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35617 35 0.13746 3.41445 2.82408 3.31937 35 - -
35618 1.38629 1.38629 1.38629 1.38629
35619 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35620 36 3.12325 2.61715 3.17007 0.17319 36 - -
35621 1.38629 1.38629 1.38629 1.38629
35622 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35623 37 3.12325 2.61715 3.17007 0.17319 37 - -
35624 1.38629 1.38629 1.38629 1.38629
35625 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35626 38 3.12325 2.61715 3.17007 0.17319 38 - -
35627 1.38629 1.38629 1.38629 1.38629
35628 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35629 39 0.13746 3.41445 2.82408 3.31937 39 - -
35630 1.38629 1.38629 1.38629 1.38629
35631 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35632 40 0.13746 3.41445 2.82408 3.31937 40 - -
35633 1.38629 1.38629 1.38629 1.38629
35634 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35635 41 2.97122 3.62232 0.11345 3.53061 41 - -
35636 1.38629 1.38629 1.38629 1.38629
35637 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35638 42 3.47246 0.12561 3.52023 2.85755 42 - -
35639 1.38629 1.38629 1.38629 1.38629
35640 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35641 43 0.13746 3.41445 2.82408 3.31937 43 - -
35642 1.38629 1.38629 1.38629 1.38629
35643 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35644 44 3.12325 2.61715 3.17007 0.17319 44 - -
35645 1.38629 1.38629 1.38629 1.38629
35646 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547
35647 45 0.13746 3.41445 2.82408 3.31937 45 - -
35648 1.38629 1.38629 1.38629 1.38629
35649 0.01824 4.01303 * 1.46634 0.26236 0.00000 *
35650 //
35651 HMMER3/b [3.0 | March 2010]
35652 NAME 4_LSU_Metazoa_4_LSU_start_eightf_long
35653 LENG 45
35654 ALPH DNA
35655 RF no
35656 CS no
35657 MAP yes
35658 DATE Mon Feb 27 22:56:41 2012
35659 NSEQ 3
35660 EFFN 3.000000
35661 CKSUM 996407087
35662 STATS LOCAL MSV -8.1735 0.72048
35663 STATS LOCAL VITERBI -7.7269 0.72048
35664 STATS LOCAL FORWARD -3.9301 0.72048
35665 HMM A C G T
35666 m->m m->i m->d i->m i->i d->m d->d
35667 COMPO 1.11576 1.38962 1.68550 1.43626
35668 1.38629 1.38629 1.38629 1.38629
35669 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
35670 1 0.15719 3.27118 2.73043 3.16274 1 - -
35671 1.38629 1.38629 1.38629 1.38629
35672 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35673 2 3.30705 0.14631 3.36166 2.73626 2 - -
35674 1.38629 1.38629 1.38629 1.38629
35675 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35676 3 2.97980 2.52563 3.03204 0.19727 3 - -
35677 1.38629 1.38629 1.38629 1.38629
35678 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35679 4 0.15719 3.27118 2.73043 3.16274 4 - -
35680 1.38629 1.38629 1.38629 1.38629
35681 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35682 5 2.86982 3.47591 0.13017 3.36931 5 - -
35683 1.38629 1.38629 1.38629 1.38629
35684 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35685 6 0.15719 3.27118 2.73043 3.16274 6 - -
35686 1.38629 1.38629 1.38629 1.38629
35687 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35688 7 3.30705 0.14631 3.36166 2.73626 7 - -
35689 1.38629 1.38629 1.38629 1.38629
35690 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35691 8 3.30705 0.14631 3.36166 2.73626 8 - -
35692 1.38629 1.38629 1.38629 1.38629
35693 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35694 9 2.97980 2.52563 3.03204 0.19727 9 - -
35695 1.38629 1.38629 1.38629 1.38629
35696 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35697 10 3.30705 0.14631 3.36166 2.73626 10 - -
35698 1.38629 1.38629 1.38629 1.38629
35699 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35700 11 0.15719 3.27118 2.73043 3.16274 11 - -
35701 1.38629 1.38629 1.38629 1.38629
35702 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35703 12 0.15719 3.27118 2.73043 3.16274 12 - -
35704 1.38629 1.38629 1.38629 1.38629
35705 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35706 13 2.97980 2.52563 3.03204 0.19727 13 - -
35707 1.38629 1.38629 1.38629 1.38629
35708 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35709 14 2.97980 2.52563 3.03204 0.19727 14 - -
35710 1.38629 1.38629 1.38629 1.38629
35711 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35712 15 2.97980 2.52563 3.03204 0.19727 15 - -
35713 1.38629 1.38629 1.38629 1.38629
35714 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35715 16 2.86982 3.47591 0.13017 3.36931 16 - -
35716 1.38629 1.38629 1.38629 1.38629
35717 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35718 17 0.15719 3.27118 2.73043 3.16274 17 - -
35719 1.38629 1.38629 1.38629 1.38629
35720 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35721 18 2.86982 3.47591 0.13017 3.36931 18 - -
35722 1.38629 1.38629 1.38629 1.38629
35723 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35724 19 3.30705 0.14631 3.36166 2.73626 19 - -
35725 1.38629 1.38629 1.38629 1.38629
35726 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35727 20 0.15719 3.27118 2.73043 3.16274 20 - -
35728 1.38629 1.38629 1.38629 1.38629
35729 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35730 21 0.15719 3.27118 2.73043 3.16274 21 - -
35731 1.38629 1.38629 1.38629 1.38629
35732 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35733 22 2.86982 3.47591 0.13017 3.36931 22 - -
35734 1.38629 1.38629 1.38629 1.38629
35735 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35736 23 0.15719 3.27118 2.73043 3.16274 23 - -
35737 1.38629 1.38629 1.38629 1.38629
35738 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35739 24 2.97980 2.52563 3.03204 0.19727 24 - -
35740 1.38629 1.38629 1.38629 1.38629
35741 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35742 25 2.97980 2.52563 3.03204 0.19727 25 - -
35743 1.38629 1.38629 1.38629 1.38629
35744 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35745 26 0.15719 3.27118 2.73043 3.16274 26 - -
35746 1.38629 1.38629 1.38629 1.38629
35747 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35748 27 3.30705 0.14631 3.36166 2.73626 27 - -
35749 1.38629 1.38629 1.38629 1.38629
35750 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35751 28 3.30705 0.14631 3.36166 2.73626 28 - -
35752 1.38629 1.38629 1.38629 1.38629
35753 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35754 29 3.30705 0.14631 3.36166 2.73626 29 - -
35755 1.38629 1.38629 1.38629 1.38629
35756 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35757 30 2.86982 3.47591 0.13017 3.36931 30 - -
35758 1.38629 1.38629 1.38629 1.38629
35759 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35760 31 3.30705 0.14631 3.36166 2.73626 31 - -
35761 1.38629 1.38629 1.38629 1.38629
35762 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35763 32 2.97980 2.52563 3.03204 0.19727 32 - -
35764 1.38629 1.38629 1.38629 1.38629
35765 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35766 33 2.86982 3.47591 0.13017 3.36931 33 - -
35767 1.38629 1.38629 1.38629 1.38629
35768 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35769 34 0.15719 3.27118 2.73043 3.16274 34 - -
35770 1.38629 1.38629 1.38629 1.38629
35771 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35772 35 0.15719 3.27118 2.73043 3.16274 35 - -
35773 1.38629 1.38629 1.38629 1.38629
35774 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35775 36 3.30705 0.14631 3.36166 2.73626 36 - -
35776 1.38629 1.38629 1.38629 1.38629
35777 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35778 37 2.97980 2.52563 3.03204 0.19727 37 - -
35779 1.38629 1.38629 1.38629 1.38629
35780 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35781 38 2.97980 2.52563 3.03204 0.19727 38 - -
35782 1.38629 1.38629 1.38629 1.38629
35783 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35784 39 0.15719 3.27118 2.73043 3.16274 39 - -
35785 1.38629 1.38629 1.38629 1.38629
35786 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35787 40 0.15719 3.27118 2.73043 3.16274 40 - -
35788 1.38629 1.38629 1.38629 1.38629
35789 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35790 41 2.86982 3.47591 0.13017 3.36931 41 - -
35791 1.38629 1.38629 1.38629 1.38629
35792 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35793 42 3.30705 0.14631 3.36166 2.73626 42 - -
35794 1.38629 1.38629 1.38629 1.38629
35795 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35796 43 0.15719 3.27118 2.73043 3.16274 43 - -
35797 1.38629 1.38629 1.38629 1.38629
35798 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35799 44 2.97980 2.52563 3.03204 0.19727 44 - -
35800 1.38629 1.38629 1.38629 1.38629
35801 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35802 45 0.15719 3.27118 2.73043 3.16274 45 - -
35803 1.38629 1.38629 1.38629 1.38629
35804 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
35805 //
35806 HMMER3/b [3.0 | March 2010]
35807 NAME 4_LSU_Metazoa_4_LSU_start_eightg_long
35808 LENG 45
35809 ALPH DNA
35810 RF no
35811 CS no
35812 MAP yes
35813 DATE Mon Feb 27 22:56:47 2012
35814 NSEQ 3
35815 EFFN 3.000000
35816 CKSUM 818586296
35817 STATS LOCAL MSV -8.0297 0.72074
35818 STATS LOCAL VITERBI -7.7589 0.72074
35819 STATS LOCAL FORWARD -3.8190 0.72074
35820 HMM A C G T
35821 m->m m->i m->d i->m i->i d->m d->d
35822 COMPO 1.11716 1.25292 1.78063 1.52054
35823 1.38629 1.38629 1.38629 1.38629
35824 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
35825 1 2.97980 2.52563 3.03204 0.19727 1 - -
35826 1.38629 1.38629 1.38629 1.38629
35827 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35828 2 2.97980 2.52563 3.03204 0.19727 2 - -
35829 1.38629 1.38629 1.38629 1.38629
35830 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35831 3 0.15719 3.27118 2.73043 3.16274 3 - -
35832 1.38629 1.38629 1.38629 1.38629
35833 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35834 4 3.30705 0.14631 3.36166 2.73626 4 - -
35835 1.38629 1.38629 1.38629 1.38629
35836 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35837 5 2.86982 3.47591 0.13017 3.36931 5 - -
35838 1.38629 1.38629 1.38629 1.38629
35839 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35840 6 0.15719 3.27118 2.73043 3.16274 6 - -
35841 1.38629 1.38629 1.38629 1.38629
35842 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35843 7 3.30705 0.14631 3.36166 2.73626 7 - -
35844 1.38629 1.38629 1.38629 1.38629
35845 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35846 8 3.30705 0.14631 3.36166 2.73626 8 - -
35847 1.38629 1.38629 1.38629 1.38629
35848 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35849 9 2.97980 2.52563 3.03204 0.19727 9 - -
35850 1.38629 1.38629 1.38629 1.38629
35851 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35852 10 3.30705 0.14631 3.36166 2.73626 10 - -
35853 1.38629 1.38629 1.38629 1.38629
35854 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35855 11 0.15719 3.27118 2.73043 3.16274 11 - -
35856 1.38629 1.38629 1.38629 1.38629
35857 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35858 12 0.15719 3.27118 2.73043 3.16274 12 - -
35859 1.38629 1.38629 1.38629 1.38629
35860 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35861 13 3.30705 0.14631 3.36166 2.73626 13 - -
35862 1.38629 1.38629 1.38629 1.38629
35863 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35864 14 2.97980 2.52563 3.03204 0.19727 14 - -
35865 1.38629 1.38629 1.38629 1.38629
35866 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35867 15 3.30705 0.14631 3.36166 2.73626 15 - -
35868 1.38629 1.38629 1.38629 1.38629
35869 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35870 16 0.15719 3.27118 2.73043 3.16274 16 - -
35871 1.38629 1.38629 1.38629 1.38629
35872 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35873 17 0.15719 3.27118 2.73043 3.16274 17 - -
35874 1.38629 1.38629 1.38629 1.38629
35875 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35876 18 2.86982 3.47591 0.13017 3.36931 18 - -
35877 1.38629 1.38629 1.38629 1.38629
35878 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35879 19 3.30705 0.14631 3.36166 2.73626 19 - -
35880 1.38629 1.38629 1.38629 1.38629
35881 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35882 20 0.15719 3.27118 2.73043 3.16274 20 - -
35883 1.38629 1.38629 1.38629 1.38629
35884 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35885 21 0.15719 3.27118 2.73043 3.16274 21 - -
35886 1.38629 1.38629 1.38629 1.38629
35887 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35888 22 2.86982 3.47591 0.13017 3.36931 22 - -
35889 1.38629 1.38629 1.38629 1.38629
35890 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35891 23 0.15719 3.27118 2.73043 3.16274 23 - -
35892 1.38629 1.38629 1.38629 1.38629
35893 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35894 24 2.43088 1.34923 2.50068 0.56112 24 - -
35895 1.38629 1.38629 1.38629 1.38629
35896 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35897 25 2.97980 2.52563 3.03204 0.19727 25 - -
35898 1.38629 1.38629 1.38629 1.38629
35899 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35900 26 0.15719 3.27118 2.73043 3.16274 26 - -
35901 1.38629 1.38629 1.38629 1.38629
35902 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35903 27 3.30705 0.14631 3.36166 2.73626 27 - -
35904 1.38629 1.38629 1.38629 1.38629
35905 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35906 28 3.30705 0.14631 3.36166 2.73626 28 - -
35907 1.38629 1.38629 1.38629 1.38629
35908 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35909 29 3.30705 0.14631 3.36166 2.73626 29 - -
35910 1.38629 1.38629 1.38629 1.38629
35911 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35912 30 2.86982 3.47591 0.13017 3.36931 30 - -
35913 1.38629 1.38629 1.38629 1.38629
35914 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35915 31 3.30705 0.14631 3.36166 2.73626 31 - -
35916 1.38629 1.38629 1.38629 1.38629
35917 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35918 32 2.97980 2.52563 3.03204 0.19727 32 - -
35919 1.38629 1.38629 1.38629 1.38629
35920 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35921 33 2.86982 3.47591 0.13017 3.36931 33 - -
35922 1.38629 1.38629 1.38629 1.38629
35923 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35924 34 0.15719 3.27118 2.73043 3.16274 34 - -
35925 1.38629 1.38629 1.38629 1.38629
35926 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35927 35 0.15719 3.27118 2.73043 3.16274 35 - -
35928 1.38629 1.38629 1.38629 1.38629
35929 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35930 36 3.30705 0.14631 3.36166 2.73626 36 - -
35931 1.38629 1.38629 1.38629 1.38629
35932 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35933 37 2.97980 2.52563 3.03204 0.19727 37 - -
35934 1.38629 1.38629 1.38629 1.38629
35935 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35936 38 2.97980 2.52563 3.03204 0.19727 38 - -
35937 1.38629 1.38629 1.38629 1.38629
35938 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35939 39 0.15719 3.27118 2.73043 3.16274 39 - -
35940 1.38629 1.38629 1.38629 1.38629
35941 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35942 40 0.15719 3.27118 2.73043 3.16274 40 - -
35943 1.38629 1.38629 1.38629 1.38629
35944 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35945 41 2.86982 3.47591 0.13017 3.36931 41 - -
35946 1.38629 1.38629 1.38629 1.38629
35947 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35948 42 3.30705 0.14631 3.36166 2.73626 42 - -
35949 1.38629 1.38629 1.38629 1.38629
35950 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35951 43 0.15719 3.27118 2.73043 3.16274 43 - -
35952 1.38629 1.38629 1.38629 1.38629
35953 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35954 44 2.97980 2.52563 3.03204 0.19727 44 - -
35955 1.38629 1.38629 1.38629 1.38629
35956 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
35957 45 0.15719 3.27118 2.73043 3.16274 45 - -
35958 1.38629 1.38629 1.38629 1.38629
35959 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
35960 //
35961 HMMER3/b [3.0 | March 2010]
35962 NAME 4_LSU_Metazoa_4_LSU_start_eleven_long
35963 LENG 45
35964 ALPH DNA
35965 RF no
35966 CS no
35967 MAP yes
35968 DATE Mon Feb 27 22:57:18 2012
35969 NSEQ 2
35970 EFFN 2.000000
35971 CKSUM 1725590445
35972 STATS LOCAL MSV -7.5776 0.72814
35973 STATS LOCAL VITERBI -8.3322 0.72814
35974 STATS LOCAL FORWARD -3.5527 0.72814
35975 HMM A C G T
35976 m->m m->i m->d i->m i->i d->m d->d
35977 COMPO 1.23965 1.39937 1.49627 1.42797
35978 1.38629 1.38629 1.38629 1.38629
35979 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
35980 1 2.57915 2.25909 2.64442 0.28946 1 - -
35981 1.38629 1.38629 1.38629 1.38629
35982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35983 2 2.81865 0.23582 2.88868 2.35662 2 - -
35984 1.38629 1.38629 1.38629 1.38629
35985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35986 3 2.57915 2.25909 2.64442 0.28946 3 - -
35987 1.38629 1.38629 1.38629 1.38629
35988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35989 4 2.53331 3.02441 0.20344 2.88069 4 - -
35990 1.38629 1.38629 1.38629 1.38629
35991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35992 5 0.23862 2.84929 2.43386 2.70756 5 - -
35993 1.38629 1.38629 1.38629 1.38629
35994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35995 6 0.23862 2.84929 2.43386 2.70756 6 - -
35996 1.38629 1.38629 1.38629 1.38629
35997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
35998 7 2.57915 2.25909 2.64442 0.28946 7 - -
35999 1.38629 1.38629 1.38629 1.38629
36000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36001 8 2.81865 0.23582 2.88868 2.35662 8 - -
36002 1.38629 1.38629 1.38629 1.38629
36003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36004 9 2.57915 2.25909 2.64442 0.28946 9 - -
36005 1.38629 1.38629 1.38629 1.38629
36006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36007 10 2.81865 0.23582 2.88868 2.35662 10 - -
36008 1.38629 1.38629 1.38629 1.38629
36009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36010 11 0.23862 2.84929 2.43386 2.70756 11 - -
36011 1.38629 1.38629 1.38629 1.38629
36012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36013 12 2.53331 3.02441 0.20344 2.88069 12 - -
36014 1.38629 1.38629 1.38629 1.38629
36015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36016 13 0.23862 2.84929 2.43386 2.70756 13 - -
36017 1.38629 1.38629 1.38629 1.38629
36018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36019 14 2.57915 2.25909 2.64442 0.28946 14 - -
36020 1.38629 1.38629 1.38629 1.38629
36021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36022 15 2.81865 0.23582 2.88868 2.35662 15 - -
36023 1.38629 1.38629 1.38629 1.38629
36024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36025 16 0.23862 2.84929 2.43386 2.70756 16 - -
36026 1.38629 1.38629 1.38629 1.38629
36027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36028 17 2.53331 3.02441 0.20344 2.88069 17 - -
36029 1.38629 1.38629 1.38629 1.38629
36030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36031 18 2.53331 3.02441 0.20344 2.88069 18 - -
36032 1.38629 1.38629 1.38629 1.38629
36033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36034 19 2.81865 0.23582 2.88868 2.35662 19 - -
36035 1.38629 1.38629 1.38629 1.38629
36036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36037 20 2.53331 3.02441 0.20344 2.88069 20 - -
36038 1.38629 1.38629 1.38629 1.38629
36039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36040 21 0.23862 2.84929 2.43386 2.70756 21 - -
36041 1.38629 1.38629 1.38629 1.38629
36042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36043 22 2.53331 3.02441 0.20344 2.88069 22 - -
36044 1.38629 1.38629 1.38629 1.38629
36045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36046 23 0.23862 2.84929 2.43386 2.70756 23 - -
36047 1.38629 1.38629 1.38629 1.38629
36048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36049 24 2.57915 2.25909 2.64442 0.28946 24 - -
36050 1.38629 1.38629 1.38629 1.38629
36051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36052 25 2.81865 0.23582 2.88868 2.35662 25 - -
36053 1.38629 1.38629 1.38629 1.38629
36054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36055 26 0.23862 2.84929 2.43386 2.70756 26 - -
36056 1.38629 1.38629 1.38629 1.38629
36057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36058 27 2.81865 0.23582 2.88868 2.35662 27 - -
36059 1.38629 1.38629 1.38629 1.38629
36060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36061 28 2.81865 0.23582 2.88868 2.35662 28 - -
36062 1.38629 1.38629 1.38629 1.38629
36063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36064 29 2.81865 0.23582 2.88868 2.35662 29 - -
36065 1.38629 1.38629 1.38629 1.38629
36066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36067 30 2.53331 3.02441 0.20344 2.88069 30 - -
36068 1.38629 1.38629 1.38629 1.38629
36069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36070 31 2.81865 0.23582 2.88868 2.35662 31 - -
36071 1.38629 1.38629 1.38629 1.38629
36072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36073 32 2.57915 2.25909 2.64442 0.28946 32 - -
36074 1.38629 1.38629 1.38629 1.38629
36075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36076 33 2.53331 3.02441 0.20344 2.88069 33 - -
36077 1.38629 1.38629 1.38629 1.38629
36078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36079 34 0.23862 2.84929 2.43386 2.70756 34 - -
36080 1.38629 1.38629 1.38629 1.38629
36081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36082 35 0.23862 2.84929 2.43386 2.70756 35 - -
36083 1.38629 1.38629 1.38629 1.38629
36084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36085 36 2.57915 2.25909 2.64442 0.28946 36 - -
36086 1.38629 1.38629 1.38629 1.38629
36087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36088 37 2.57915 2.25909 2.64442 0.28946 37 - -
36089 1.38629 1.38629 1.38629 1.38629
36090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36091 38 2.57915 2.25909 2.64442 0.28946 38 - -
36092 1.38629 1.38629 1.38629 1.38629
36093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36094 39 0.23862 2.84929 2.43386 2.70756 39 - -
36095 1.38629 1.38629 1.38629 1.38629
36096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36097 40 0.23862 2.84929 2.43386 2.70756 40 - -
36098 1.38629 1.38629 1.38629 1.38629
36099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36100 41 2.53331 3.02441 0.20344 2.88069 41 - -
36101 1.38629 1.38629 1.38629 1.38629
36102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36103 42 2.81865 0.23582 2.88868 2.35662 42 - -
36104 1.38629 1.38629 1.38629 1.38629
36105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36106 43 0.23862 2.84929 2.43386 2.70756 43 - -
36107 1.38629 1.38629 1.38629 1.38629
36108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36109 44 2.57915 2.25909 2.64442 0.28946 44 - -
36110 1.38629 1.38629 1.38629 1.38629
36111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36112 45 0.23862 2.84929 2.43386 2.70756 45 - -
36113 1.38629 1.38629 1.38629 1.38629
36114 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
36115 //
36116 HMMER3/b [3.0 | March 2010]
36117 NAME 4_LSU_Metazoa_4_LSU_start_fifteen_long
36118 LENG 45
36119 ALPH DNA
36120 RF no
36121 CS no
36122 MAP yes
36123 DATE Mon Feb 27 22:58:43 2012
36124 NSEQ 6
36125 EFFN 3.237305
36126 CKSUM 3693209712
36127 STATS LOCAL MSV -7.9784 0.71932
36128 STATS LOCAL VITERBI -7.6145 0.71932
36129 STATS LOCAL FORWARD -4.1523 0.71932
36130 HMM A C G T
36131 m->m m->i m->d i->m i->i d->m d->d
36132 COMPO 1.28148 1.14624 1.52996 1.67131
36133 1.38629 1.38629 1.38629 1.38629
36134 0.03748 3.99587 3.99587 1.46634 0.26236 0.00000 *
36135 1 3.40113 0.13409 3.45193 2.80566 1 - -
36136 1.38629 1.38629 1.38629 1.38629
36137 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36138 2 3.06071 2.57738 3.10992 0.18324 2 - -
36139 1.38629 1.38629 1.38629 1.38629
36140 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36141 3 3.40113 0.13409 3.45193 2.80566 3 - -
36142 1.38629 1.38629 1.38629 1.38629
36143 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36144 4 3.40113 0.13409 3.45193 2.80566 4 - -
36145 1.38629 1.38629 1.38629 1.38629
36146 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36147 5 2.92809 3.55954 0.12029 3.46131 5 - -
36148 1.38629 1.38629 1.38629 1.38629
36149 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36150 6 0.14561 3.35254 2.78388 3.25159 6 - -
36151 1.38629 1.38629 1.38629 1.38629
36152 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36153 7 3.40113 0.13409 3.45193 2.80566 7 - -
36154 1.38629 1.38629 1.38629 1.38629
36155 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36156 8 3.40113 0.13409 3.45193 2.80566 8 - -
36157 1.38629 1.38629 1.38629 1.38629
36158 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36159 9 3.06071 2.57738 3.10992 0.18324 9 - -
36160 1.38629 1.38629 1.38629 1.38629
36161 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36162 10 3.40113 0.13409 3.45193 2.80566 10 - -
36163 1.38629 1.38629 1.38629 1.38629
36164 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36165 11 0.14561 3.35254 2.78388 3.25159 11 - -
36166 1.38629 1.38629 1.38629 1.38629
36167 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36168 12 2.92809 3.55954 0.12029 3.46131 12 - -
36169 1.38629 1.38629 1.38629 1.38629
36170 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36171 13 0.14561 3.35254 2.78388 3.25159 13 - -
36172 1.38629 1.38629 1.38629 1.38629
36173 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36174 14 3.06071 2.57738 3.10992 0.18324 14 - -
36175 1.38629 1.38629 1.38629 1.38629
36176 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36177 15 3.40113 0.13409 3.45193 2.80566 15 - -
36178 1.38629 1.38629 1.38629 1.38629
36179 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36180 16 0.14561 3.35254 2.78388 3.25159 16 - -
36181 1.38629 1.38629 1.38629 1.38629
36182 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36183 17 2.92809 3.55954 0.12029 3.46131 17 - -
36184 1.38629 1.38629 1.38629 1.38629
36185 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36186 18 2.92809 3.55954 0.12029 3.46131 18 - -
36187 1.38629 1.38629 1.38629 1.38629
36188 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36189 19 3.40113 0.13409 3.45193 2.80566 19 - -
36190 1.38629 1.38629 1.38629 1.38629
36191 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36192 20 2.92809 3.55954 0.12029 3.46131 20 - -
36193 1.38629 1.38629 1.38629 1.38629
36194 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36195 21 0.14561 3.35254 2.78388 3.25159 21 - -
36196 1.38629 1.38629 1.38629 1.38629
36197 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36198 22 2.92809 3.55954 0.12029 3.46131 22 - -
36199 1.38629 1.38629 1.38629 1.38629
36200 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36201 23 0.14561 3.35254 2.78388 3.25159 23 - -
36202 1.38629 1.38629 1.38629 1.38629
36203 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36204 24 3.40113 0.13409 3.45193 2.80566 24 - -
36205 1.38629 1.38629 1.38629 1.38629
36206 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36207 25 2.69920 1.80781 2.76119 0.34883 25 - -
36208 1.38629 1.38629 1.38629 1.38629
36209 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36210 26 0.14561 3.35254 2.78388 3.25159 26 - -
36211 1.38629 1.38629 1.38629 1.38629
36212 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36213 27 3.40113 0.13409 3.45193 2.80566 27 - -
36214 1.38629 1.38629 1.38629 1.38629
36215 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36216 28 2.92809 3.55954 0.12029 3.46131 28 - -
36217 1.38629 1.38629 1.38629 1.38629
36218 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36219 29 3.40113 0.13409 3.45193 2.80566 29 - -
36220 1.38629 1.38629 1.38629 1.38629
36221 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36222 30 3.40113 0.13409 3.45193 2.80566 30 - -
36223 1.38629 1.38629 1.38629 1.38629
36224 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36225 31 3.40113 0.13409 3.45193 2.80566 31 - -
36226 1.38629 1.38629 1.38629 1.38629
36227 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36228 32 3.06071 2.57738 3.10992 0.18324 32 - -
36229 1.38629 1.38629 1.38629 1.38629
36230 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36231 33 2.92809 3.55954 0.12029 3.46131 33 - -
36232 1.38629 1.38629 1.38629 1.38629
36233 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36234 34 0.14561 3.35254 2.78388 3.25159 34 - -
36235 1.38629 1.38629 1.38629 1.38629
36236 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36237 35 0.14561 3.35254 2.78388 3.25159 35 - -
36238 1.38629 1.38629 1.38629 1.38629
36239 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36240 36 3.40113 0.13409 3.45193 2.80566 36 - -
36241 1.38629 1.38629 1.38629 1.38629
36242 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36243 37 3.06071 2.57738 3.10992 0.18324 37 - -
36244 1.38629 1.38629 1.38629 1.38629
36245 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36246 38 3.06071 2.57738 3.10992 0.18324 38 - -
36247 1.38629 1.38629 1.38629 1.38629
36248 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36249 39 0.14561 3.35254 2.78388 3.25159 39 - -
36250 1.38629 1.38629 1.38629 1.38629
36251 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36252 40 0.14561 3.35254 2.78388 3.25159 40 - -
36253 1.38629 1.38629 1.38629 1.38629
36254 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36255 41 2.92809 3.55954 0.12029 3.46131 41 - -
36256 1.38629 1.38629 1.38629 1.38629
36257 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36258 42 3.40113 0.13409 3.45193 2.80566 42 - -
36259 1.38629 1.38629 1.38629 1.38629
36260 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36261 43 0.14561 3.35254 2.78388 3.25159 43 - -
36262 1.38629 1.38629 1.38629 1.38629
36263 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36264 44 3.06071 2.57738 3.10992 0.18324 44 - -
36265 1.38629 1.38629 1.38629 1.38629
36266 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547
36267 45 0.14561 3.35254 2.78388 3.25159 45 - -
36268 1.38629 1.38629 1.38629 1.38629
36269 0.01891 3.97731 * 1.46634 0.26236 0.00000 *
36270 //
36271 HMMER3/b [3.0 | March 2010]
36272 NAME 4_LSU_Metazoa_4_LSU_start_fifty_long
36273 LENG 45
36274 ALPH DNA
36275 RF no
36276 CS no
36277 MAP yes
36278 DATE Wed Feb 29 11:39:45 2012
36279 NSEQ 2
36280 EFFN 2.000000
36281 CKSUM 3588865177
36282 STATS LOCAL MSV -7.6416 0.72809
36283 STATS LOCAL VITERBI -8.1785 0.72809
36284 STATS LOCAL FORWARD -3.3202 0.72809
36285 HMM A C G T
36286 m->m m->i m->d i->m i->i d->m d->d
36287 COMPO 1.29441 1.23704 1.57164 1.47844
36288 1.38629 1.38629 1.38629 1.38629
36289 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
36290 1 2.57915 2.25909 2.64442 0.28946 1 - -
36291 1.38629 1.38629 1.38629 1.38629
36292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36293 2 2.81865 0.23582 2.88868 2.35662 2 - -
36294 1.38629 1.38629 1.38629 1.38629
36295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36296 3 2.57915 2.25909 2.64442 0.28946 3 - -
36297 1.38629 1.38629 1.38629 1.38629
36298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36299 4 2.81865 0.23582 2.88868 2.35662 4 - -
36300 1.38629 1.38629 1.38629 1.38629
36301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36302 5 2.53331 3.02441 0.20344 2.88069 5 - -
36303 1.38629 1.38629 1.38629 1.38629
36304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36305 6 0.23862 2.84929 2.43386 2.70756 6 - -
36306 1.38629 1.38629 1.38629 1.38629
36307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36308 7 2.81865 0.23582 2.88868 2.35662 7 - -
36309 1.38629 1.38629 1.38629 1.38629
36310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36311 8 2.81865 0.23582 2.88868 2.35662 8 - -
36312 1.38629 1.38629 1.38629 1.38629
36313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36314 9 2.57915 2.25909 2.64442 0.28946 9 - -
36315 1.38629 1.38629 1.38629 1.38629
36316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36317 10 2.81865 0.23582 2.88868 2.35662 10 - -
36318 1.38629 1.38629 1.38629 1.38629
36319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36320 11 0.23862 2.84929 2.43386 2.70756 11 - -
36321 1.38629 1.38629 1.38629 1.38629
36322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36323 12 2.53331 3.02441 0.20344 2.88069 12 - -
36324 1.38629 1.38629 1.38629 1.38629
36325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36326 13 0.23862 2.84929 2.43386 2.70756 13 - -
36327 1.38629 1.38629 1.38629 1.38629
36328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36329 14 2.57915 2.25909 2.64442 0.28946 14 - -
36330 1.38629 1.38629 1.38629 1.38629
36331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36332 15 2.81865 0.23582 2.88868 2.35662 15 - -
36333 1.38629 1.38629 1.38629 1.38629
36334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36335 16 0.23862 2.84929 2.43386 2.70756 16 - -
36336 1.38629 1.38629 1.38629 1.38629
36337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36338 17 2.53331 3.02441 0.20344 2.88069 17 - -
36339 1.38629 1.38629 1.38629 1.38629
36340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36341 18 2.81865 0.23582 2.88868 2.35662 18 - -
36342 1.38629 1.38629 1.38629 1.38629
36343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36344 19 2.81865 0.23582 2.88868 2.35662 19 - -
36345 1.38629 1.38629 1.38629 1.38629
36346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36347 20 2.53331 3.02441 0.20344 2.88069 20 - -
36348 1.38629 1.38629 1.38629 1.38629
36349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36350 21 0.23862 2.84929 2.43386 2.70756 21 - -
36351 1.38629 1.38629 1.38629 1.38629
36352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36353 22 2.53331 3.02441 0.20344 2.88069 22 - -
36354 1.38629 1.38629 1.38629 1.38629
36355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36356 23 2.53331 3.02441 0.20344 2.88069 23 - -
36357 1.38629 1.38629 1.38629 1.38629
36358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36359 24 2.81865 0.23582 2.88868 2.35662 24 - -
36360 1.38629 1.38629 1.38629 1.38629
36361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36362 25 2.57915 2.25909 2.64442 0.28946 25 - -
36363 1.38629 1.38629 1.38629 1.38629
36364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36365 26 0.23862 2.84929 2.43386 2.70756 26 - -
36366 1.38629 1.38629 1.38629 1.38629
36367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36368 27 2.81865 0.23582 2.88868 2.35662 27 - -
36369 1.38629 1.38629 1.38629 1.38629
36370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36371 28 2.81865 0.23582 2.88868 2.35662 28 - -
36372 1.38629 1.38629 1.38629 1.38629
36373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36374 29 2.81865 0.23582 2.88868 2.35662 29 - -
36375 1.38629 1.38629 1.38629 1.38629
36376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36377 30 2.53331 3.02441 0.20344 2.88069 30 - -
36378 1.38629 1.38629 1.38629 1.38629
36379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36380 31 2.81865 0.23582 2.88868 2.35662 31 - -
36381 1.38629 1.38629 1.38629 1.38629
36382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36383 32 2.57915 2.25909 2.64442 0.28946 32 - -
36384 1.38629 1.38629 1.38629 1.38629
36385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36386 33 0.23862 2.84929 2.43386 2.70756 33 - -
36387 1.38629 1.38629 1.38629 1.38629
36388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36389 34 0.23862 2.84929 2.43386 2.70756 34 - -
36390 1.38629 1.38629 1.38629 1.38629
36391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36392 35 0.23862 2.84929 2.43386 2.70756 35 - -
36393 1.38629 1.38629 1.38629 1.38629
36394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36395 36 2.57915 2.25909 2.64442 0.28946 36 - -
36396 1.38629 1.38629 1.38629 1.38629
36397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36398 37 2.57915 2.25909 2.64442 0.28946 37 - -
36399 1.38629 1.38629 1.38629 1.38629
36400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36401 38 2.57915 2.25909 2.64442 0.28946 38 - -
36402 1.38629 1.38629 1.38629 1.38629
36403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36404 39 0.23862 2.84929 2.43386 2.70756 39 - -
36405 1.38629 1.38629 1.38629 1.38629
36406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36407 40 0.23862 2.84929 2.43386 2.70756 40 - -
36408 1.38629 1.38629 1.38629 1.38629
36409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36410 41 2.53331 3.02441 0.20344 2.88069 41 - -
36411 1.38629 1.38629 1.38629 1.38629
36412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36413 42 2.81865 0.23582 2.88868 2.35662 42 - -
36414 1.38629 1.38629 1.38629 1.38629
36415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36416 43 0.23862 2.84929 2.43386 2.70756 43 - -
36417 1.38629 1.38629 1.38629 1.38629
36418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36419 44 2.57915 2.25909 2.64442 0.28946 44 - -
36420 1.38629 1.38629 1.38629 1.38629
36421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
36422 45 0.23862 2.84929 2.43386 2.70756 45 - -
36423 1.38629 1.38629 1.38629 1.38629
36424 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
36425 //
36426 HMMER3/b [3.0 | March 2010]
36427 NAME 4_LSU_Metazoa_4_LSU_start_fiftyeight_long
36428 LENG 45
36429 ALPH DNA
36430 RF no
36431 CS no
36432 MAP yes
36433 DATE Wed Feb 29 11:41:05 2012
36434 NSEQ 3
36435 EFFN 3.000000
36436 CKSUM 2941133694
36437 STATS LOCAL MSV -8.1652 0.72067
36438 STATS LOCAL VITERBI -7.6786 0.72067
36439 STATS LOCAL FORWARD -3.8005 0.72067
36440 HMM A C G T
36441 m->m m->i m->d i->m i->i d->m d->d
36442 COMPO 1.16779 1.29306 1.59776 1.55037
36443 1.38629 1.38629 1.38629 1.38629
36444 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
36445 1 2.97980 2.52563 3.03204 0.19727 1 - -
36446 1.38629 1.38629 1.38629 1.38629
36447 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36448 2 2.97980 2.52563 3.03204 0.19727 2 - -
36449 1.38629 1.38629 1.38629 1.38629
36450 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36451 3 3.30705 0.14631 3.36166 2.73626 3 - -
36452 1.38629 1.38629 1.38629 1.38629
36453 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36454 4 3.30705 0.14631 3.36166 2.73626 4 - -
36455 1.38629 1.38629 1.38629 1.38629
36456 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36457 5 2.86982 3.47591 0.13017 3.36931 5 - -
36458 1.38629 1.38629 1.38629 1.38629
36459 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36460 6 0.15719 3.27118 2.73043 3.16274 6 - -
36461 1.38629 1.38629 1.38629 1.38629
36462 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36463 7 3.30705 0.14631 3.36166 2.73626 7 - -
36464 1.38629 1.38629 1.38629 1.38629
36465 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36466 8 3.30705 0.14631 3.36166 2.73626 8 - -
36467 1.38629 1.38629 1.38629 1.38629
36468 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36469 9 2.97980 2.52563 3.03204 0.19727 9 - -
36470 1.38629 1.38629 1.38629 1.38629
36471 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36472 10 3.30705 0.14631 3.36166 2.73626 10 - -
36473 1.38629 1.38629 1.38629 1.38629
36474 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36475 11 0.15719 3.27118 2.73043 3.16274 11 - -
36476 1.38629 1.38629 1.38629 1.38629
36477 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36478 12 2.86982 3.47591 0.13017 3.36931 12 - -
36479 1.38629 1.38629 1.38629 1.38629
36480 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36481 13 0.15719 3.27118 2.73043 3.16274 13 - -
36482 1.38629 1.38629 1.38629 1.38629
36483 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36484 14 2.97980 2.52563 3.03204 0.19727 14 - -
36485 1.38629 1.38629 1.38629 1.38629
36486 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36487 15 3.30705 0.14631 3.36166 2.73626 15 - -
36488 1.38629 1.38629 1.38629 1.38629
36489 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36490 16 2.86982 3.47591 0.13017 3.36931 16 - -
36491 1.38629 1.38629 1.38629 1.38629
36492 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36493 17 0.15719 3.27118 2.73043 3.16274 17 - -
36494 1.38629 1.38629 1.38629 1.38629
36495 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36496 18 0.15719 3.27118 2.73043 3.16274 18 - -
36497 1.38629 1.38629 1.38629 1.38629
36498 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36499 19 3.30705 0.14631 3.36166 2.73626 19 - -
36500 1.38629 1.38629 1.38629 1.38629
36501 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36502 20 2.86982 3.47591 0.13017 3.36931 20 - -
36503 1.38629 1.38629 1.38629 1.38629
36504 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36505 21 0.15719 3.27118 2.73043 3.16274 21 - -
36506 1.38629 1.38629 1.38629 1.38629
36507 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36508 22 2.86982 3.47591 0.13017 3.36931 22 - -
36509 1.38629 1.38629 1.38629 1.38629
36510 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36511 23 0.15719 3.27118 2.73043 3.16274 23 - -
36512 1.38629 1.38629 1.38629 1.38629
36513 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36514 24 0.15719 3.27118 2.73043 3.16274 24 - -
36515 1.38629 1.38629 1.38629 1.38629
36516 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36517 25 2.97980 2.52563 3.03204 0.19727 25 - -
36518 1.38629 1.38629 1.38629 1.38629
36519 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36520 26 0.15719 3.27118 2.73043 3.16274 26 - -
36521 1.38629 1.38629 1.38629 1.38629
36522 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36523 27 3.30705 0.14631 3.36166 2.73626 27 - -
36524 1.38629 1.38629 1.38629 1.38629
36525 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36526 28 3.30705 0.14631 3.36166 2.73626 28 - -
36527 1.38629 1.38629 1.38629 1.38629
36528 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36529 29 3.30705 0.14631 3.36166 2.73626 29 - -
36530 1.38629 1.38629 1.38629 1.38629
36531 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36532 30 2.86982 3.47591 0.13017 3.36931 30 - -
36533 1.38629 1.38629 1.38629 1.38629
36534 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36535 31 3.30705 0.14631 3.36166 2.73626 31 - -
36536 1.38629 1.38629 1.38629 1.38629
36537 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36538 32 2.43223 0.62271 2.50508 1.22417 32 - -
36539 1.38629 1.38629 1.38629 1.38629
36540 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36541 33 2.86982 3.47591 0.13017 3.36931 33 - -
36542 1.38629 1.38629 1.38629 1.38629
36543 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36544 34 0.15719 3.27118 2.73043 3.16274 34 - -
36545 1.38629 1.38629 1.38629 1.38629
36546 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36547 35 0.15719 3.27118 2.73043 3.16274 35 - -
36548 1.38629 1.38629 1.38629 1.38629
36549 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36550 36 2.97980 2.52563 3.03204 0.19727 36 - -
36551 1.38629 1.38629 1.38629 1.38629
36552 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36553 37 2.97980 2.52563 3.03204 0.19727 37 - -
36554 1.38629 1.38629 1.38629 1.38629
36555 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36556 38 2.97980 2.52563 3.03204 0.19727 38 - -
36557 1.38629 1.38629 1.38629 1.38629
36558 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36559 39 0.15719 3.27118 2.73043 3.16274 39 - -
36560 1.38629 1.38629 1.38629 1.38629
36561 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36562 40 0.15719 3.27118 2.73043 3.16274 40 - -
36563 1.38629 1.38629 1.38629 1.38629
36564 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36565 41 2.86982 3.47591 0.13017 3.36931 41 - -
36566 1.38629 1.38629 1.38629 1.38629
36567 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36568 42 3.30705 0.14631 3.36166 2.73626 42 - -
36569 1.38629 1.38629 1.38629 1.38629
36570 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36571 43 0.15719 3.27118 2.73043 3.16274 43 - -
36572 1.38629 1.38629 1.38629 1.38629
36573 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36574 44 2.97980 2.52563 3.03204 0.19727 44 - -
36575 1.38629 1.38629 1.38629 1.38629
36576 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36577 45 0.15719 3.27118 2.73043 3.16274 45 - -
36578 1.38629 1.38629 1.38629 1.38629
36579 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
36580 //
36581 HMMER3/b [3.0 | March 2010]
36582 NAME 4_LSU_Metazoa_4_LSU_start_fiftyfive_long
36583 LENG 45
36584 ALPH DNA
36585 RF no
36586 CS no
36587 MAP yes
36588 DATE Wed Feb 29 11:40:37 2012
36589 NSEQ 3
36590 EFFN 3.000000
36591 CKSUM 169487606
36592 STATS LOCAL MSV -7.9297 0.72040
36593 STATS LOCAL VITERBI -7.7017 0.72040
36594 STATS LOCAL FORWARD -4.0414 0.72040
36595 HMM A C G T
36596 m->m m->i m->d i->m i->i d->m d->d
36597 COMPO 1.28208 1.14532 1.52431 1.67853
36598 1.38629 1.38629 1.38629 1.38629
36599 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
36600 1 3.30705 0.14631 3.36166 2.73626 1 - -
36601 1.38629 1.38629 1.38629 1.38629
36602 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36603 2 2.97980 2.52563 3.03204 0.19727 2 - -
36604 1.38629 1.38629 1.38629 1.38629
36605 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36606 3 3.30705 0.14631 3.36166 2.73626 3 - -
36607 1.38629 1.38629 1.38629 1.38629
36608 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36609 4 3.30705 0.14631 3.36166 2.73626 4 - -
36610 1.38629 1.38629 1.38629 1.38629
36611 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36612 5 2.86982 3.47591 0.13017 3.36931 5 - -
36613 1.38629 1.38629 1.38629 1.38629
36614 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36615 6 0.15719 3.27118 2.73043 3.16274 6 - -
36616 1.38629 1.38629 1.38629 1.38629
36617 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36618 7 3.30705 0.14631 3.36166 2.73626 7 - -
36619 1.38629 1.38629 1.38629 1.38629
36620 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36621 8 3.30705 0.14631 3.36166 2.73626 8 - -
36622 1.38629 1.38629 1.38629 1.38629
36623 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36624 9 2.97980 2.52563 3.03204 0.19727 9 - -
36625 1.38629 1.38629 1.38629 1.38629
36626 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36627 10 3.30705 0.14631 3.36166 2.73626 10 - -
36628 1.38629 1.38629 1.38629 1.38629
36629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36630 11 0.15719 3.27118 2.73043 3.16274 11 - -
36631 1.38629 1.38629 1.38629 1.38629
36632 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36633 12 2.86982 3.47591 0.13017 3.36931 12 - -
36634 1.38629 1.38629 1.38629 1.38629
36635 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36636 13 0.15719 3.27118 2.73043 3.16274 13 - -
36637 1.38629 1.38629 1.38629 1.38629
36638 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36639 14 2.97980 2.52563 3.03204 0.19727 14 - -
36640 1.38629 1.38629 1.38629 1.38629
36641 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36642 15 3.30705 0.14631 3.36166 2.73626 15 - -
36643 1.38629 1.38629 1.38629 1.38629
36644 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36645 16 0.15719 3.27118 2.73043 3.16274 16 - -
36646 1.38629 1.38629 1.38629 1.38629
36647 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36648 17 2.86982 3.47591 0.13017 3.36931 17 - -
36649 1.38629 1.38629 1.38629 1.38629
36650 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36651 18 2.86982 3.47591 0.13017 3.36931 18 - -
36652 1.38629 1.38629 1.38629 1.38629
36653 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36654 19 3.30705 0.14631 3.36166 2.73626 19 - -
36655 1.38629 1.38629 1.38629 1.38629
36656 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36657 20 2.86982 3.47591 0.13017 3.36931 20 - -
36658 1.38629 1.38629 1.38629 1.38629
36659 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36660 21 0.15719 3.27118 2.73043 3.16274 21 - -
36661 1.38629 1.38629 1.38629 1.38629
36662 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36663 22 2.86982 3.47591 0.13017 3.36931 22 - -
36664 1.38629 1.38629 1.38629 1.38629
36665 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36666 23 0.15719 3.27118 2.73043 3.16274 23 - -
36667 1.38629 1.38629 1.38629 1.38629
36668 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36669 24 3.30705 0.14631 3.36166 2.73626 24 - -
36670 1.38629 1.38629 1.38629 1.38629
36671 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36672 25 2.43088 1.34923 2.50068 0.56112 25 - -
36673 1.38629 1.38629 1.38629 1.38629
36674 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36675 26 0.15719 3.27118 2.73043 3.16274 26 - -
36676 1.38629 1.38629 1.38629 1.38629
36677 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36678 27 3.30705 0.14631 3.36166 2.73626 27 - -
36679 1.38629 1.38629 1.38629 1.38629
36680 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36681 28 2.86982 3.47591 0.13017 3.36931 28 - -
36682 1.38629 1.38629 1.38629 1.38629
36683 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36684 29 3.30705 0.14631 3.36166 2.73626 29 - -
36685 1.38629 1.38629 1.38629 1.38629
36686 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36687 30 3.30705 0.14631 3.36166 2.73626 30 - -
36688 1.38629 1.38629 1.38629 1.38629
36689 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36690 31 3.30705 0.14631 3.36166 2.73626 31 - -
36691 1.38629 1.38629 1.38629 1.38629
36692 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36693 32 2.97980 2.52563 3.03204 0.19727 32 - -
36694 1.38629 1.38629 1.38629 1.38629
36695 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36696 33 2.86982 3.47591 0.13017 3.36931 33 - -
36697 1.38629 1.38629 1.38629 1.38629
36698 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36699 34 0.15719 3.27118 2.73043 3.16274 34 - -
36700 1.38629 1.38629 1.38629 1.38629
36701 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36702 35 0.15719 3.27118 2.73043 3.16274 35 - -
36703 1.38629 1.38629 1.38629 1.38629
36704 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36705 36 3.30705 0.14631 3.36166 2.73626 36 - -
36706 1.38629 1.38629 1.38629 1.38629
36707 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36708 37 2.97980 2.52563 3.03204 0.19727 37 - -
36709 1.38629 1.38629 1.38629 1.38629
36710 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36711 38 2.97980 2.52563 3.03204 0.19727 38 - -
36712 1.38629 1.38629 1.38629 1.38629
36713 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36714 39 0.15719 3.27118 2.73043 3.16274 39 - -
36715 1.38629 1.38629 1.38629 1.38629
36716 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36717 40 0.15719 3.27118 2.73043 3.16274 40 - -
36718 1.38629 1.38629 1.38629 1.38629
36719 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36720 41 2.86982 3.47591 0.13017 3.36931 41 - -
36721 1.38629 1.38629 1.38629 1.38629
36722 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36723 42 3.30705 0.14631 3.36166 2.73626 42 - -
36724 1.38629 1.38629 1.38629 1.38629
36725 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36726 43 0.15719 3.27118 2.73043 3.16274 43 - -
36727 1.38629 1.38629 1.38629 1.38629
36728 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36729 44 2.97980 2.52563 3.03204 0.19727 44 - -
36730 1.38629 1.38629 1.38629 1.38629
36731 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36732 45 0.15719 3.27118 2.73043 3.16274 45 - -
36733 1.38629 1.38629 1.38629 1.38629
36734 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
36735 //
36736 HMMER3/b [3.0 | March 2010]
36737 NAME 4_LSU_Metazoa_4_LSU_start_fiftyfour_long
36738 LENG 45
36739 ALPH DNA
36740 RF no
36741 CS no
36742 MAP yes
36743 DATE Wed Feb 29 11:40:28 2012
36744 NSEQ 4
36745 EFFN 3.363281
36746 CKSUM 3978608917
36747 STATS LOCAL MSV -8.1693 0.71933
36748 STATS LOCAL VITERBI -7.5580 0.71933
36749 STATS LOCAL FORWARD -4.1977 0.71933
36750 HMM A C G T
36751 m->m m->i m->d i->m i->i d->m d->d
36752 COMPO 1.21441 1.30452 1.49557 1.57171
36753 1.38629 1.38629 1.38629 1.38629
36754 0.03661 4.01877 4.01877 1.46634 0.26236 0.00000 *
36755 1 3.10166 2.60344 3.14932 0.17659 1 - -
36756 1.38629 1.38629 1.38629 1.38629
36757 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36758 2 2.95651 3.60084 0.11574 3.50687 2 - -
36759 1.38629 1.38629 1.38629 1.38629
36760 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36761 3 3.10166 2.60344 3.14932 0.17659 3 - -
36762 1.38629 1.38629 1.38629 1.38629
36763 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36764 4 3.44798 0.12845 3.49681 2.83981 4 - -
36765 1.38629 1.38629 1.38629 1.38629
36766 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36767 5 2.95651 3.60084 0.11574 3.50687 5 - -
36768 1.38629 1.38629 1.38629 1.38629
36769 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36770 6 0.14020 3.39317 2.81030 3.29606 6 - -
36771 1.38629 1.38629 1.38629 1.38629
36772 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36773 7 3.44798 0.12845 3.49681 2.83981 7 - -
36774 1.38629 1.38629 1.38629 1.38629
36775 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36776 8 3.44798 0.12845 3.49681 2.83981 8 - -
36777 1.38629 1.38629 1.38629 1.38629
36778 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36779 9 3.10166 2.60344 3.14932 0.17659 9 - -
36780 1.38629 1.38629 1.38629 1.38629
36781 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36782 10 3.44798 0.12845 3.49681 2.83981 10 - -
36783 1.38629 1.38629 1.38629 1.38629
36784 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36785 11 0.14020 3.39317 2.81030 3.29606 11 - -
36786 1.38629 1.38629 1.38629 1.38629
36787 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36788 12 2.06759 1.02509 0.97430 1.98565 12 - -
36789 1.38629 1.38629 1.38629 1.38629
36790 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36791 13 0.14020 3.39317 2.81030 3.29606 13 - -
36792 1.38629 1.38629 1.38629 1.38629
36793 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36794 14 3.10166 2.60344 3.14932 0.17659 14 - -
36795 1.38629 1.38629 1.38629 1.38629
36796 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36797 15 3.44798 0.12845 3.49681 2.83981 15 - -
36798 1.38629 1.38629 1.38629 1.38629
36799 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36800 16 0.14020 3.39317 2.81030 3.29606 16 - -
36801 1.38629 1.38629 1.38629 1.38629
36802 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36803 17 2.95651 3.60084 0.11574 3.50687 17 - -
36804 1.38629 1.38629 1.38629 1.38629
36805 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36806 18 2.95651 3.60084 0.11574 3.50687 18 - -
36807 1.38629 1.38629 1.38629 1.38629
36808 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36809 19 3.44798 0.12845 3.49681 2.83981 19 - -
36810 1.38629 1.38629 1.38629 1.38629
36811 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36812 20 2.95651 3.60084 0.11574 3.50687 20 - -
36813 1.38629 1.38629 1.38629 1.38629
36814 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36815 21 0.14020 3.39317 2.81030 3.29606 21 - -
36816 1.38629 1.38629 1.38629 1.38629
36817 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36818 22 2.95651 3.60084 0.11574 3.50687 22 - -
36819 1.38629 1.38629 1.38629 1.38629
36820 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36821 23 0.14020 3.39317 2.81030 3.29606 23 - -
36822 1.38629 1.38629 1.38629 1.38629
36823 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36824 24 3.44798 0.12845 3.49681 2.83981 24 - -
36825 1.38629 1.38629 1.38629 1.38629
36826 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36827 25 0.14020 3.39317 2.81030 3.29606 25 - -
36828 1.38629 1.38629 1.38629 1.38629
36829 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36830 26 0.14020 3.39317 2.81030 3.29606 26 - -
36831 1.38629 1.38629 1.38629 1.38629
36832 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36833 27 3.44798 0.12845 3.49681 2.83981 27 - -
36834 1.38629 1.38629 1.38629 1.38629
36835 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36836 28 3.44798 0.12845 3.49681 2.83981 28 - -
36837 1.38629 1.38629 1.38629 1.38629
36838 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36839 29 3.44798 0.12845 3.49681 2.83981 29 - -
36840 1.38629 1.38629 1.38629 1.38629
36841 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36842 30 2.95651 3.60084 0.11574 3.50687 30 - -
36843 1.38629 1.38629 1.38629 1.38629
36844 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36845 31 3.44798 0.12845 3.49681 2.83981 31 - -
36846 1.38629 1.38629 1.38629 1.38629
36847 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36848 32 3.10166 2.60344 3.14932 0.17659 32 - -
36849 1.38629 1.38629 1.38629 1.38629
36850 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36851 33 2.95651 3.60084 0.11574 3.50687 33 - -
36852 1.38629 1.38629 1.38629 1.38629
36853 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36854 34 0.14020 3.39317 2.81030 3.29606 34 - -
36855 1.38629 1.38629 1.38629 1.38629
36856 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36857 35 0.14020 3.39317 2.81030 3.29606 35 - -
36858 1.38629 1.38629 1.38629 1.38629
36859 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36860 36 3.10166 2.60344 3.14932 0.17659 36 - -
36861 1.38629 1.38629 1.38629 1.38629
36862 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36863 37 3.10166 2.60344 3.14932 0.17659 37 - -
36864 1.38629 1.38629 1.38629 1.38629
36865 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36866 38 3.10166 2.60344 3.14932 0.17659 38 - -
36867 1.38629 1.38629 1.38629 1.38629
36868 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36869 39 0.14020 3.39317 2.81030 3.29606 39 - -
36870 1.38629 1.38629 1.38629 1.38629
36871 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36872 40 0.14020 3.39317 2.81030 3.29606 40 - -
36873 1.38629 1.38629 1.38629 1.38629
36874 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36875 41 2.95651 3.60084 0.11574 3.50687 41 - -
36876 1.38629 1.38629 1.38629 1.38629
36877 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36878 42 3.44798 0.12845 3.49681 2.83981 42 - -
36879 1.38629 1.38629 1.38629 1.38629
36880 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36881 43 0.14020 3.39317 2.81030 3.29606 43 - -
36882 1.38629 1.38629 1.38629 1.38629
36883 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36884 44 3.10166 2.60344 3.14932 0.17659 44 - -
36885 1.38629 1.38629 1.38629 1.38629
36886 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
36887 45 0.14020 3.39317 2.81030 3.29606 45 - -
36888 1.38629 1.38629 1.38629 1.38629
36889 0.01847 4.00063 * 1.46634 0.26236 0.00000 *
36890 //
36891 HMMER3/b [3.0 | March 2010]
36892 NAME 4_LSU_Metazoa_4_LSU_start_fiftynine_long
36893 LENG 45
36894 ALPH DNA
36895 RF no
36896 CS no
36897 MAP yes
36898 DATE Wed Feb 29 11:41:16 2012
36899 NSEQ 3
36900 EFFN 3.000000
36901 CKSUM 1744694786
36902 STATS LOCAL MSV -7.9097 0.72088
36903 STATS LOCAL VITERBI -7.7741 0.72088
36904 STATS LOCAL FORWARD -3.9482 0.72088
36905 HMM A C G T
36906 m->m m->i m->d i->m i->i d->m d->d
36907 COMPO 1.21864 1.51265 1.51502 1.33090
36908 1.38629 1.38629 1.38629 1.38629
36909 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
36910 1 2.97980 2.52563 3.03204 0.19727 1 - -
36911 1.38629 1.38629 1.38629 1.38629
36912 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36913 2 2.97980 2.52563 3.03204 0.19727 2 - -
36914 1.38629 1.38629 1.38629 1.38629
36915 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36916 3 2.97980 2.52563 3.03204 0.19727 3 - -
36917 1.38629 1.38629 1.38629 1.38629
36918 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36919 4 3.30705 0.14631 3.36166 2.73626 4 - -
36920 1.38629 1.38629 1.38629 1.38629
36921 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36922 5 2.86982 3.47591 0.13017 3.36931 5 - -
36923 1.38629 1.38629 1.38629 1.38629
36924 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36925 6 0.15719 3.27118 2.73043 3.16274 6 - -
36926 1.38629 1.38629 1.38629 1.38629
36927 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36928 7 3.30705 0.14631 3.36166 2.73626 7 - -
36929 1.38629 1.38629 1.38629 1.38629
36930 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36931 8 3.30705 0.14631 3.36166 2.73626 8 - -
36932 1.38629 1.38629 1.38629 1.38629
36933 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36934 9 2.97980 2.52563 3.03204 0.19727 9 - -
36935 1.38629 1.38629 1.38629 1.38629
36936 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36937 10 2.86982 3.47591 0.13017 3.36931 10 - -
36938 1.38629 1.38629 1.38629 1.38629
36939 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36940 11 0.15719 3.27118 2.73043 3.16274 11 - -
36941 1.38629 1.38629 1.38629 1.38629
36942 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36943 12 2.86982 3.47591 0.13017 3.36931 12 - -
36944 1.38629 1.38629 1.38629 1.38629
36945 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36946 13 0.15719 3.27118 2.73043 3.16274 13 - -
36947 1.38629 1.38629 1.38629 1.38629
36948 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36949 14 2.97980 2.52563 3.03204 0.19727 14 - -
36950 1.38629 1.38629 1.38629 1.38629
36951 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36952 15 2.97980 2.52563 3.03204 0.19727 15 - -
36953 1.38629 1.38629 1.38629 1.38629
36954 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36955 16 0.15719 3.27118 2.73043 3.16274 16 - -
36956 1.38629 1.38629 1.38629 1.38629
36957 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36958 17 2.86982 3.47591 0.13017 3.36931 17 - -
36959 1.38629 1.38629 1.38629 1.38629
36960 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36961 18 2.86982 3.47591 0.13017 3.36931 18 - -
36962 1.38629 1.38629 1.38629 1.38629
36963 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36964 19 2.97980 2.52563 3.03204 0.19727 19 - -
36965 1.38629 1.38629 1.38629 1.38629
36966 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36967 20 0.15719 3.27118 2.73043 3.16274 20 - -
36968 1.38629 1.38629 1.38629 1.38629
36969 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36970 21 0.15719 3.27118 2.73043 3.16274 21 - -
36971 1.38629 1.38629 1.38629 1.38629
36972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36973 22 2.86982 3.47591 0.13017 3.36931 22 - -
36974 1.38629 1.38629 1.38629 1.38629
36975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36976 23 0.15719 3.27118 2.73043 3.16274 23 - -
36977 1.38629 1.38629 1.38629 1.38629
36978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36979 24 3.30705 0.14631 3.36166 2.73626 24 - -
36980 1.38629 1.38629 1.38629 1.38629
36981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36982 25 2.97980 2.52563 3.03204 0.19727 25 - -
36983 1.38629 1.38629 1.38629 1.38629
36984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36985 26 0.15719 3.27118 2.73043 3.16274 26 - -
36986 1.38629 1.38629 1.38629 1.38629
36987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36988 27 3.30705 0.14631 3.36166 2.73626 27 - -
36989 1.38629 1.38629 1.38629 1.38629
36990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36991 28 3.30705 0.14631 3.36166 2.73626 28 - -
36992 1.38629 1.38629 1.38629 1.38629
36993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36994 29 3.30705 0.14631 3.36166 2.73626 29 - -
36995 1.38629 1.38629 1.38629 1.38629
36996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
36997 30 2.86982 3.47591 0.13017 3.36931 30 - -
36998 1.38629 1.38629 1.38629 1.38629
36999 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37000 31 3.30705 0.14631 3.36166 2.73626 31 - -
37001 1.38629 1.38629 1.38629 1.38629
37002 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37003 32 2.43088 1.34923 2.50068 0.56112 32 - -
37004 1.38629 1.38629 1.38629 1.38629
37005 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37006 33 2.86982 3.47591 0.13017 3.36931 33 - -
37007 1.38629 1.38629 1.38629 1.38629
37008 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37009 34 0.15719 3.27118 2.73043 3.16274 34 - -
37010 1.38629 1.38629 1.38629 1.38629
37011 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37012 35 0.15719 3.27118 2.73043 3.16274 35 - -
37013 1.38629 1.38629 1.38629 1.38629
37014 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37015 36 2.97980 2.52563 3.03204 0.19727 36 - -
37016 1.38629 1.38629 1.38629 1.38629
37017 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37018 37 2.97980 2.52563 3.03204 0.19727 37 - -
37019 1.38629 1.38629 1.38629 1.38629
37020 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37021 38 2.97980 2.52563 3.03204 0.19727 38 - -
37022 1.38629 1.38629 1.38629 1.38629
37023 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37024 39 0.15719 3.27118 2.73043 3.16274 39 - -
37025 1.38629 1.38629 1.38629 1.38629
37026 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37027 40 0.15719 3.27118 2.73043 3.16274 40 - -
37028 1.38629 1.38629 1.38629 1.38629
37029 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37030 41 2.86982 3.47591 0.13017 3.36931 41 - -
37031 1.38629 1.38629 1.38629 1.38629
37032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37033 42 3.30705 0.14631 3.36166 2.73626 42 - -
37034 1.38629 1.38629 1.38629 1.38629
37035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37036 43 0.15719 3.27118 2.73043 3.16274 43 - -
37037 1.38629 1.38629 1.38629 1.38629
37038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37039 44 2.97980 2.52563 3.03204 0.19727 44 - -
37040 1.38629 1.38629 1.38629 1.38629
37041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37042 45 0.15719 3.27118 2.73043 3.16274 45 - -
37043 1.38629 1.38629 1.38629 1.38629
37044 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
37045 //
37046 HMMER3/b [3.0 | March 2010]
37047 NAME 4_LSU_Metazoa_4_LSU_start_fiftyone_long
37048 LENG 45
37049 ALPH DNA
37050 RF no
37051 CS no
37052 MAP yes
37053 DATE Wed Feb 29 11:39:54 2012
37054 NSEQ 2
37055 EFFN 2.000000
37056 CKSUM 7046851
37057 STATS LOCAL MSV -7.6652 0.72933
37058 STATS LOCAL VITERBI -8.2495 0.72933
37059 STATS LOCAL FORWARD -3.3659 0.72933
37060 HMM A C G T
37061 m->m m->i m->d i->m i->i d->m d->d
37062 COMPO 1.22961 1.37917 1.44642 1.51234
37063 1.38629 1.38629 1.38629 1.38629
37064 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
37065 1 2.57915 2.25909 2.64442 0.28946 1 - -
37066 1.38629 1.38629 1.38629 1.38629
37067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37068 2 2.53331 3.02441 0.20344 2.88069 2 - -
37069 1.38629 1.38629 1.38629 1.38629
37070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37071 3 2.57915 2.25909 2.64442 0.28946 3 - -
37072 1.38629 1.38629 1.38629 1.38629
37073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37074 4 2.81865 0.23582 2.88868 2.35662 4 - -
37075 1.38629 1.38629 1.38629 1.38629
37076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37077 5 2.53331 3.02441 0.20344 2.88069 5 - -
37078 1.38629 1.38629 1.38629 1.38629
37079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37080 6 0.23862 2.84929 2.43386 2.70756 6 - -
37081 1.38629 1.38629 1.38629 1.38629
37082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37083 7 2.81865 0.23582 2.88868 2.35662 7 - -
37084 1.38629 1.38629 1.38629 1.38629
37085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37086 8 2.81865 0.23582 2.88868 2.35662 8 - -
37087 1.38629 1.38629 1.38629 1.38629
37088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37089 9 2.57915 2.25909 2.64442 0.28946 9 - -
37090 1.38629 1.38629 1.38629 1.38629
37091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37092 10 2.81865 0.23582 2.88868 2.35662 10 - -
37093 1.38629 1.38629 1.38629 1.38629
37094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37095 11 0.23862 2.84929 2.43386 2.70756 11 - -
37096 1.38629 1.38629 1.38629 1.38629
37097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37098 12 2.53331 3.02441 0.20344 2.88069 12 - -
37099 1.38629 1.38629 1.38629 1.38629
37100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37101 13 0.23862 2.84929 2.43386 2.70756 13 - -
37102 1.38629 1.38629 1.38629 1.38629
37103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37104 14 2.57915 2.25909 2.64442 0.28946 14 - -
37105 1.38629 1.38629 1.38629 1.38629
37106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37107 15 2.81865 0.23582 2.88868 2.35662 15 - -
37108 1.38629 1.38629 1.38629 1.38629
37109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37110 16 0.23862 2.84929 2.43386 2.70756 16 - -
37111 1.38629 1.38629 1.38629 1.38629
37112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37113 17 2.53331 3.02441 0.20344 2.88069 17 - -
37114 1.38629 1.38629 1.38629 1.38629
37115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37116 18 0.23862 2.84929 2.43386 2.70756 18 - -
37117 1.38629 1.38629 1.38629 1.38629
37118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37119 19 2.81865 0.23582 2.88868 2.35662 19 - -
37120 1.38629 1.38629 1.38629 1.38629
37121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37122 20 2.53331 3.02441 0.20344 2.88069 20 - -
37123 1.38629 1.38629 1.38629 1.38629
37124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37125 21 0.23862 2.84929 2.43386 2.70756 21 - -
37126 1.38629 1.38629 1.38629 1.38629
37127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37128 22 2.53331 3.02441 0.20344 2.88069 22 - -
37129 1.38629 1.38629 1.38629 1.38629
37130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37131 23 0.23862 2.84929 2.43386 2.70756 23 - -
37132 1.38629 1.38629 1.38629 1.38629
37133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37134 24 1.88179 1.10717 1.04597 1.79675 24 - -
37135 1.38629 1.38629 1.38629 1.38629
37136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37137 25 1.89532 1.96405 1.06955 1.00436 25 - -
37138 1.38629 1.38629 1.38629 1.38629
37139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37140 26 0.23862 2.84929 2.43386 2.70756 26 - -
37141 1.38629 1.38629 1.38629 1.38629
37142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37143 27 2.81865 0.23582 2.88868 2.35662 27 - -
37144 1.38629 1.38629 1.38629 1.38629
37145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37146 28 2.81865 0.23582 2.88868 2.35662 28 - -
37147 1.38629 1.38629 1.38629 1.38629
37148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37149 29 2.81865 0.23582 2.88868 2.35662 29 - -
37150 1.38629 1.38629 1.38629 1.38629
37151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37152 30 2.53331 3.02441 0.20344 2.88069 30 - -
37153 1.38629 1.38629 1.38629 1.38629
37154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37155 31 2.81865 0.23582 2.88868 2.35662 31 - -
37156 1.38629 1.38629 1.38629 1.38629
37157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37158 32 2.57915 2.25909 2.64442 0.28946 32 - -
37159 1.38629 1.38629 1.38629 1.38629
37160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37161 33 2.53331 3.02441 0.20344 2.88069 33 - -
37162 1.38629 1.38629 1.38629 1.38629
37163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37164 34 0.23862 2.84929 2.43386 2.70756 34 - -
37165 1.38629 1.38629 1.38629 1.38629
37166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37167 35 0.23862 2.84929 2.43386 2.70756 35 - -
37168 1.38629 1.38629 1.38629 1.38629
37169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37170 36 2.57915 2.25909 2.64442 0.28946 36 - -
37171 1.38629 1.38629 1.38629 1.38629
37172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37173 37 2.57915 2.25909 2.64442 0.28946 37 - -
37174 1.38629 1.38629 1.38629 1.38629
37175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37176 38 2.57915 2.25909 2.64442 0.28946 38 - -
37177 1.38629 1.38629 1.38629 1.38629
37178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37179 39 0.23862 2.84929 2.43386 2.70756 39 - -
37180 1.38629 1.38629 1.38629 1.38629
37181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37182 40 0.23862 2.84929 2.43386 2.70756 40 - -
37183 1.38629 1.38629 1.38629 1.38629
37184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37185 41 2.53331 3.02441 0.20344 2.88069 41 - -
37186 1.38629 1.38629 1.38629 1.38629
37187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37188 42 2.81865 0.23582 2.88868 2.35662 42 - -
37189 1.38629 1.38629 1.38629 1.38629
37190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37191 43 0.23862 2.84929 2.43386 2.70756 43 - -
37192 1.38629 1.38629 1.38629 1.38629
37193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37194 44 2.57915 2.25909 2.64442 0.28946 44 - -
37195 1.38629 1.38629 1.38629 1.38629
37196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37197 45 0.23862 2.84929 2.43386 2.70756 45 - -
37198 1.38629 1.38629 1.38629 1.38629
37199 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
37200 //
37201 HMMER3/b [3.0 | March 2010]
37202 NAME 4_LSU_Metazoa_4_LSU_start_fiftyseven_long
37203 LENG 45
37204 ALPH DNA
37205 RF no
37206 CS no
37207 MAP yes
37208 DATE Wed Feb 29 11:40:55 2012
37209 NSEQ 3
37210 EFFN 3.000000
37211 CKSUM 1156733467
37212 STATS LOCAL MSV -8.0424 0.72110
37213 STATS LOCAL VITERBI -7.9132 0.72110
37214 STATS LOCAL FORWARD -4.1416 0.72110
37215 HMM A C G T
37216 m->m m->i m->d i->m i->i d->m d->d
37217 COMPO 1.13098 1.31158 1.66327 1.52155
37218 1.38629 1.38629 1.38629 1.38629
37219 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
37220 1 0.15719 3.27118 2.73043 3.16274 1 - -
37221 1.38629 1.38629 1.38629 1.38629
37222 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37223 2 2.97980 2.52563 3.03204 0.19727 2 - -
37224 1.38629 1.38629 1.38629 1.38629
37225 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37226 3 0.53825 2.56454 1.38402 2.42241 3 - -
37227 1.38629 1.38629 1.38629 1.38629
37228 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37229 4 3.30705 0.14631 3.36166 2.73626 4 - -
37230 1.38629 1.38629 1.38629 1.38629
37231 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37232 5 0.15719 3.27118 2.73043 3.16274 5 - -
37233 1.38629 1.38629 1.38629 1.38629
37234 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37235 6 0.15719 3.27118 2.73043 3.16274 6 - -
37236 1.38629 1.38629 1.38629 1.38629
37237 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37238 7 3.30705 0.14631 3.36166 2.73626 7 - -
37239 1.38629 1.38629 1.38629 1.38629
37240 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37241 8 3.30705 0.14631 3.36166 2.73626 8 - -
37242 1.38629 1.38629 1.38629 1.38629
37243 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37244 9 2.97980 2.52563 3.03204 0.19727 9 - -
37245 1.38629 1.38629 1.38629 1.38629
37246 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37247 10 2.86982 3.47591 0.13017 3.36931 10 - -
37248 1.38629 1.38629 1.38629 1.38629
37249 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37250 11 0.15719 3.27118 2.73043 3.16274 11 - -
37251 1.38629 1.38629 1.38629 1.38629
37252 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37253 12 0.15719 3.27118 2.73043 3.16274 12 - -
37254 1.38629 1.38629 1.38629 1.38629
37255 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37256 13 3.30705 0.14631 3.36166 2.73626 13 - -
37257 1.38629 1.38629 1.38629 1.38629
37258 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37259 14 2.97980 2.52563 3.03204 0.19727 14 - -
37260 1.38629 1.38629 1.38629 1.38629
37261 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37262 15 3.30705 0.14631 3.36166 2.73626 15 - -
37263 1.38629 1.38629 1.38629 1.38629
37264 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37265 16 0.15719 3.27118 2.73043 3.16274 16 - -
37266 1.38629 1.38629 1.38629 1.38629
37267 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37268 17 2.86982 3.47591 0.13017 3.36931 17 - -
37269 1.38629 1.38629 1.38629 1.38629
37270 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37271 18 0.15719 3.27118 2.73043 3.16274 18 - -
37272 1.38629 1.38629 1.38629 1.38629
37273 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37274 19 3.30705 0.14631 3.36166 2.73626 19 - -
37275 1.38629 1.38629 1.38629 1.38629
37276 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37277 20 2.86982 3.47591 0.13017 3.36931 20 - -
37278 1.38629 1.38629 1.38629 1.38629
37279 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37280 21 2.97980 2.52563 3.03204 0.19727 21 - -
37281 1.38629 1.38629 1.38629 1.38629
37282 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37283 22 2.86982 3.47591 0.13017 3.36931 22 - -
37284 1.38629 1.38629 1.38629 1.38629
37285 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37286 23 0.15719 3.27118 2.73043 3.16274 23 - -
37287 1.38629 1.38629 1.38629 1.38629
37288 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37289 24 2.97980 2.52563 3.03204 0.19727 24 - -
37290 1.38629 1.38629 1.38629 1.38629
37291 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37292 25 2.97980 2.52563 3.03204 0.19727 25 - -
37293 1.38629 1.38629 1.38629 1.38629
37294 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37295 26 0.15719 3.27118 2.73043 3.16274 26 - -
37296 1.38629 1.38629 1.38629 1.38629
37297 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37298 27 3.30705 0.14631 3.36166 2.73626 27 - -
37299 1.38629 1.38629 1.38629 1.38629
37300 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37301 28 3.30705 0.14631 3.36166 2.73626 28 - -
37302 1.38629 1.38629 1.38629 1.38629
37303 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37304 29 3.30705 0.14631 3.36166 2.73626 29 - -
37305 1.38629 1.38629 1.38629 1.38629
37306 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37307 30 2.86982 3.47591 0.13017 3.36931 30 - -
37308 1.38629 1.38629 1.38629 1.38629
37309 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37310 31 3.30705 0.14631 3.36166 2.73626 31 - -
37311 1.38629 1.38629 1.38629 1.38629
37312 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37313 32 2.43258 1.35379 2.50233 0.55855 32 - -
37314 1.38629 1.38629 1.38629 1.38629
37315 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37316 33 2.86982 3.47591 0.13017 3.36931 33 - -
37317 1.38629 1.38629 1.38629 1.38629
37318 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37319 34 0.15719 3.27118 2.73043 3.16274 34 - -
37320 1.38629 1.38629 1.38629 1.38629
37321 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37322 35 0.15719 3.27118 2.73043 3.16274 35 - -
37323 1.38629 1.38629 1.38629 1.38629
37324 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37325 36 3.30705 0.14631 3.36166 2.73626 36 - -
37326 1.38629 1.38629 1.38629 1.38629
37327 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37328 37 2.97980 2.52563 3.03204 0.19727 37 - -
37329 1.38629 1.38629 1.38629 1.38629
37330 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37331 38 2.97980 2.52563 3.03204 0.19727 38 - -
37332 1.38629 1.38629 1.38629 1.38629
37333 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37334 39 0.15719 3.27118 2.73043 3.16274 39 - -
37335 1.38629 1.38629 1.38629 1.38629
37336 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37337 40 0.15719 3.27118 2.73043 3.16274 40 - -
37338 1.38629 1.38629 1.38629 1.38629
37339 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37340 41 2.86982 3.47591 0.13017 3.36931 41 - -
37341 1.38629 1.38629 1.38629 1.38629
37342 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37343 42 3.30705 0.14631 3.36166 2.73626 42 - -
37344 1.38629 1.38629 1.38629 1.38629
37345 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37346 43 0.15719 3.27118 2.73043 3.16274 43 - -
37347 1.38629 1.38629 1.38629 1.38629
37348 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37349 44 2.97980 2.52563 3.03204 0.19727 44 - -
37350 1.38629 1.38629 1.38629 1.38629
37351 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
37352 45 0.15719 3.27118 2.73043 3.16274 45 - -
37353 1.38629 1.38629 1.38629 1.38629
37354 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
37355 //
37356 HMMER3/b [3.0 | March 2010]
37357 NAME 4_LSU_Metazoa_4_LSU_start_fiftysix_long
37358 LENG 45
37359 ALPH DNA
37360 RF no
37361 CS no
37362 MAP yes
37363 DATE Wed Feb 29 11:40:47 2012
37364 NSEQ 2
37365 EFFN 2.000000
37366 CKSUM 788693777
37367 STATS LOCAL MSV -7.4171 0.72882
37368 STATS LOCAL VITERBI -8.2608 0.72882
37369 STATS LOCAL FORWARD -3.5113 0.72882
37370 HMM A C G T
37371 m->m m->i m->d i->m i->i d->m d->d
37372 COMPO 1.21578 1.39607 1.53509 1.42497
37373 1.38629 1.38629 1.38629 1.38629
37374 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
37375 1 0.23862 2.84929 2.43386 2.70756 1 - -
37376 1.38629 1.38629 1.38629 1.38629
37377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37378 2 2.57915 2.25909 2.64442 0.28946 2 - -
37379 1.38629 1.38629 1.38629 1.38629
37380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37381 3 2.53331 3.02441 0.20344 2.88069 3 - -
37382 1.38629 1.38629 1.38629 1.38629
37383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37384 4 2.81865 0.23582 2.88868 2.35662 4 - -
37385 1.38629 1.38629 1.38629 1.38629
37386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37387 5 0.23862 2.84929 2.43386 2.70756 5 - -
37388 1.38629 1.38629 1.38629 1.38629
37389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37390 6 0.23862 2.84929 2.43386 2.70756 6 - -
37391 1.38629 1.38629 1.38629 1.38629
37392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37393 7 2.81865 0.23582 2.88868 2.35662 7 - -
37394 1.38629 1.38629 1.38629 1.38629
37395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37396 8 2.81865 0.23582 2.88868 2.35662 8 - -
37397 1.38629 1.38629 1.38629 1.38629
37398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37399 9 2.57915 2.25909 2.64442 0.28946 9 - -
37400 1.38629 1.38629 1.38629 1.38629
37401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37402 10 2.53331 3.02441 0.20344 2.88069 10 - -
37403 1.38629 1.38629 1.38629 1.38629
37404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37405 11 0.23862 2.84929 2.43386 2.70756 11 - -
37406 1.38629 1.38629 1.38629 1.38629
37407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37408 12 0.23862 2.84929 2.43386 2.70756 12 - -
37409 1.38629 1.38629 1.38629 1.38629
37410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37411 13 2.81865 0.23582 2.88868 2.35662 13 - -
37412 1.38629 1.38629 1.38629 1.38629
37413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37414 14 2.57915 2.25909 2.64442 0.28946 14 - -
37415 1.38629 1.38629 1.38629 1.38629
37416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37417 15 2.81865 0.23582 2.88868 2.35662 15 - -
37418 1.38629 1.38629 1.38629 1.38629
37419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37420 16 0.23862 2.84929 2.43386 2.70756 16 - -
37421 1.38629 1.38629 1.38629 1.38629
37422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37423 17 2.53331 3.02441 0.20344 2.88069 17 - -
37424 1.38629 1.38629 1.38629 1.38629
37425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37426 18 0.92825 2.28391 0.95698 2.13014 18 - -
37427 1.38629 1.38629 1.38629 1.38629
37428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37429 19 2.57915 2.25909 2.64442 0.28946 19 - -
37430 1.38629 1.38629 1.38629 1.38629
37431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37432 20 2.53331 3.02441 0.20344 2.88069 20 - -
37433 1.38629 1.38629 1.38629 1.38629
37434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37435 21 2.57915 2.25909 2.64442 0.28946 21 - -
37436 1.38629 1.38629 1.38629 1.38629
37437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37438 22 2.53331 3.02441 0.20344 2.88069 22 - -
37439 1.38629 1.38629 1.38629 1.38629
37440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37441 23 0.23862 2.84929 2.43386 2.70756 23 - -
37442 1.38629 1.38629 1.38629 1.38629
37443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37444 24 2.57915 2.25909 2.64442 0.28946 24 - -
37445 1.38629 1.38629 1.38629 1.38629
37446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37447 25 2.57915 2.25909 2.64442 0.28946 25 - -
37448 1.38629 1.38629 1.38629 1.38629
37449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37450 26 0.23862 2.84929 2.43386 2.70756 26 - -
37451 1.38629 1.38629 1.38629 1.38629
37452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37453 27 2.81865 0.23582 2.88868 2.35662 27 - -
37454 1.38629 1.38629 1.38629 1.38629
37455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37456 28 2.81865 0.23582 2.88868 2.35662 28 - -
37457 1.38629 1.38629 1.38629 1.38629
37458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37459 29 2.81865 0.23582 2.88868 2.35662 29 - -
37460 1.38629 1.38629 1.38629 1.38629
37461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37462 30 2.53331 3.02441 0.20344 2.88069 30 - -
37463 1.38629 1.38629 1.38629 1.38629
37464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37465 31 2.81865 0.23582 2.88868 2.35662 31 - -
37466 1.38629 1.38629 1.38629 1.38629
37467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37468 32 2.57915 2.25909 2.64442 0.28946 32 - -
37469 1.38629 1.38629 1.38629 1.38629
37470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37471 33 2.53331 3.02441 0.20344 2.88069 33 - -
37472 1.38629 1.38629 1.38629 1.38629
37473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37474 34 0.23862 2.84929 2.43386 2.70756 34 - -
37475 1.38629 1.38629 1.38629 1.38629
37476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37477 35 0.23862 2.84929 2.43386 2.70756 35 - -
37478 1.38629 1.38629 1.38629 1.38629
37479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37480 36 2.81865 0.23582 2.88868 2.35662 36 - -
37481 1.38629 1.38629 1.38629 1.38629
37482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37483 37 2.57915 2.25909 2.64442 0.28946 37 - -
37484 1.38629 1.38629 1.38629 1.38629
37485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37486 38 2.57915 2.25909 2.64442 0.28946 38 - -
37487 1.38629 1.38629 1.38629 1.38629
37488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37489 39 0.23862 2.84929 2.43386 2.70756 39 - -
37490 1.38629 1.38629 1.38629 1.38629
37491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37492 40 0.23862 2.84929 2.43386 2.70756 40 - -
37493 1.38629 1.38629 1.38629 1.38629
37494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37495 41 2.53331 3.02441 0.20344 2.88069 41 - -
37496 1.38629 1.38629 1.38629 1.38629
37497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37498 42 2.81865 0.23582 2.88868 2.35662 42 - -
37499 1.38629 1.38629 1.38629 1.38629
37500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37501 43 0.23862 2.84929 2.43386 2.70756 43 - -
37502 1.38629 1.38629 1.38629 1.38629
37503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37504 44 2.57915 2.25909 2.64442 0.28946 44 - -
37505 1.38629 1.38629 1.38629 1.38629
37506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
37507 45 0.23862 2.84929 2.43386 2.70756 45 - -
37508 1.38629 1.38629 1.38629 1.38629
37509 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
37510 //
37511 HMMER3/b [3.0 | March 2010]
37512 NAME 4_LSU_Metazoa_4_LSU_start_fiftythree_long
37513 LENG 45
37514 ALPH DNA
37515 RF no
37516 CS no
37517 MAP yes
37518 DATE Wed Feb 29 11:40:15 2012
37519 NSEQ 6
37520 EFFN 3.770508
37521 CKSUM 3616590276
37522 STATS LOCAL MSV -7.2567 0.71932
37523 STATS LOCAL VITERBI -7.6107 0.71932
37524 STATS LOCAL FORWARD -4.2424 0.71932
37525 HMM A C G T
37526 m->m m->i m->d i->m i->i d->m d->d
37527 COMPO 1.22316 1.36172 1.52650 1.46021
37528 1.38629 1.38629 1.38629 1.38629
37529 0.03407 4.08942 4.08942 1.46634 0.26236 0.00000 *
37530 1 2.25146 2.22866 1.37358 0.62758 1 - -
37531 1.38629 1.38629 1.38629 1.38629
37532 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37533 2 2.20737 2.32313 0.66481 1.28132 2 - -
37534 1.38629 1.38629 1.38629 1.38629
37535 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37536 3 2.58882 1.33574 2.65600 0.52476 3 - -
37537 1.38629 1.38629 1.38629 1.38629
37538 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37539 4 3.58586 0.11338 3.62859 2.93895 4 - -
37540 1.38629 1.38629 1.38629 1.38629
37541 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37542 5 3.03835 3.72114 0.10355 3.64005 5 - -
37543 1.38629 1.38629 1.38629 1.38629
37544 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37545 6 0.12549 3.51350 2.88787 3.42806 6 - -
37546 1.38629 1.38629 1.38629 1.38629
37547 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37548 7 3.58586 0.11338 3.62859 2.93895 7 - -
37549 1.38629 1.38629 1.38629 1.38629
37550 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37551 8 3.58586 0.11338 3.62859 2.93895 8 - -
37552 1.38629 1.38629 1.38629 1.38629
37553 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37554 9 3.22519 2.68179 3.26804 0.15814 9 - -
37555 1.38629 1.38629 1.38629 1.38629
37556 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37557 10 3.58586 0.11338 3.62859 2.93895 10 - -
37558 1.38629 1.38629 1.38629 1.38629
37559 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37560 11 0.12549 3.51350 2.88787 3.42806 11 - -
37561 1.38629 1.38629 1.38629 1.38629
37562 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37563 12 3.03835 3.72114 0.10355 3.64005 12 - -
37564 1.38629 1.38629 1.38629 1.38629
37565 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37566 13 0.12549 3.51350 2.88787 3.42806 13 - -
37567 1.38629 1.38629 1.38629 1.38629
37568 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37569 14 3.22519 2.68179 3.26804 0.15814 14 - -
37570 1.38629 1.38629 1.38629 1.38629
37571 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37572 15 3.58586 0.11338 3.62859 2.93895 15 - -
37573 1.38629 1.38629 1.38629 1.38629
37574 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37575 16 0.12549 3.51350 2.88787 3.42806 16 - -
37576 1.38629 1.38629 1.38629 1.38629
37577 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37578 17 3.03835 3.72114 0.10355 3.64005 17 - -
37579 1.38629 1.38629 1.38629 1.38629
37580 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37581 18 0.12549 3.51350 2.88787 3.42806 18 - -
37582 1.38629 1.38629 1.38629 1.38629
37583 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37584 19 3.58586 0.11338 3.62859 2.93895 19 - -
37585 1.38629 1.38629 1.38629 1.38629
37586 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37587 20 3.03835 3.72114 0.10355 3.64005 20 - -
37588 1.38629 1.38629 1.38629 1.38629
37589 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37590 21 0.50286 2.71339 1.37489 2.57673 21 - -
37591 1.38629 1.38629 1.38629 1.38629
37592 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37593 22 3.03835 3.72114 0.10355 3.64005 22 - -
37594 1.38629 1.38629 1.38629 1.38629
37595 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37596 23 0.12549 3.51350 2.88787 3.42806 23 - -
37597 1.38629 1.38629 1.38629 1.38629
37598 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37599 24 3.22519 2.68179 3.26804 0.15814 24 - -
37600 1.38629 1.38629 1.38629 1.38629
37601 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37602 25 3.22519 2.68179 3.26804 0.15814 25 - -
37603 1.38629 1.38629 1.38629 1.38629
37604 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37605 26 0.12549 3.51350 2.88787 3.42806 26 - -
37606 1.38629 1.38629 1.38629 1.38629
37607 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37608 27 3.58586 0.11338 3.62859 2.93895 27 - -
37609 1.38629 1.38629 1.38629 1.38629
37610 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37611 28 3.58586 0.11338 3.62859 2.93895 28 - -
37612 1.38629 1.38629 1.38629 1.38629
37613 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37614 29 3.58586 0.11338 3.62859 2.93895 29 - -
37615 1.38629 1.38629 1.38629 1.38629
37616 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37617 30 3.03835 3.72114 0.10355 3.64005 30 - -
37618 1.38629 1.38629 1.38629 1.38629
37619 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37620 31 3.58586 0.11338 3.62859 2.93895 31 - -
37621 1.38629 1.38629 1.38629 1.38629
37622 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37623 32 3.22519 2.68179 3.26804 0.15814 32 - -
37624 1.38629 1.38629 1.38629 1.38629
37625 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37626 33 3.03835 3.72114 0.10355 3.64005 33 - -
37627 1.38629 1.38629 1.38629 1.38629
37628 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37629 34 0.12549 3.51350 2.88787 3.42806 34 - -
37630 1.38629 1.38629 1.38629 1.38629
37631 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37632 35 0.12549 3.51350 2.88787 3.42806 35 - -
37633 1.38629 1.38629 1.38629 1.38629
37634 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37635 36 3.22519 2.68179 3.26804 0.15814 36 - -
37636 1.38629 1.38629 1.38629 1.38629
37637 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37638 37 3.22519 2.68179 3.26804 0.15814 37 - -
37639 1.38629 1.38629 1.38629 1.38629
37640 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37641 38 3.22519 2.68179 3.26804 0.15814 38 - -
37642 1.38629 1.38629 1.38629 1.38629
37643 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37644 39 0.12549 3.51350 2.88787 3.42806 39 - -
37645 1.38629 1.38629 1.38629 1.38629
37646 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37647 40 0.12549 3.51350 2.88787 3.42806 40 - -
37648 1.38629 1.38629 1.38629 1.38629
37649 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37650 41 3.03835 3.72114 0.10355 3.64005 41 - -
37651 1.38629 1.38629 1.38629 1.38629
37652 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37653 42 3.58586 0.11338 3.62859 2.93895 42 - -
37654 1.38629 1.38629 1.38629 1.38629
37655 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37656 43 0.12549 3.51350 2.88787 3.42806 43 - -
37657 1.38629 1.38629 1.38629 1.38629
37658 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37659 44 3.22519 2.68179 3.26804 0.15814 44 - -
37660 1.38629 1.38629 1.38629 1.38629
37661 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547
37662 45 0.12549 3.51350 2.88787 3.42806 45 - -
37663 1.38629 1.38629 1.38629 1.38629
37664 0.01718 4.07253 * 1.46634 0.26236 0.00000 *
37665 //
37666 HMMER3/b [3.0 | March 2010]
37667 NAME 4_LSU_Metazoa_4_LSU_start_fiftytwo_long
37668 LENG 45
37669 ALPH DNA
37670 RF no
37671 CS no
37672 MAP yes
37673 DATE Wed Feb 29 11:40:04 2012
37674 NSEQ 4
37675 EFFN 3.386719
37676 CKSUM 2343365187
37677 STATS LOCAL MSV -7.6766 0.71933
37678 STATS LOCAL VITERBI -7.6091 0.71933
37679 STATS LOCAL FORWARD -3.8781 0.71933
37680 HMM A C G T
37681 m->m m->i m->d i->m i->i d->m d->d
37682 COMPO 1.15940 1.37200 1.52000 1.54170
37683 1.38629 1.38629 1.38629 1.38629
37684 0.03646 4.02298 4.02298 1.46634 0.26236 0.00000 *
37685 1 3.10913 2.60819 3.15650 0.17540 1 - -
37686 1.38629 1.38629 1.38629 1.38629
37687 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37688 2 3.10913 2.60819 3.15650 0.17540 2 - -
37689 1.38629 1.38629 1.38629 1.38629
37690 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37691 3 2.96162 3.60830 0.11494 3.51511 3 - -
37692 1.38629 1.38629 1.38629 1.38629
37693 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37694 4 3.45647 0.12746 3.50493 2.84597 4 - -
37695 1.38629 1.38629 1.38629 1.38629
37696 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37697 5 2.96162 3.60830 0.11494 3.51511 5 - -
37698 1.38629 1.38629 1.38629 1.38629
37699 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37700 6 0.13925 3.40055 2.81508 3.30414 6 - -
37701 1.38629 1.38629 1.38629 1.38629
37702 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37703 7 3.45647 0.12746 3.50493 2.84597 7 - -
37704 1.38629 1.38629 1.38629 1.38629
37705 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37706 8 3.45647 0.12746 3.50493 2.84597 8 - -
37707 1.38629 1.38629 1.38629 1.38629
37708 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37709 9 3.10913 2.60819 3.15650 0.17540 9 - -
37710 1.38629 1.38629 1.38629 1.38629
37711 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37712 10 3.45647 0.12746 3.50493 2.84597 10 - -
37713 1.38629 1.38629 1.38629 1.38629
37714 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37715 11 0.13925 3.40055 2.81508 3.30414 11 - -
37716 1.38629 1.38629 1.38629 1.38629
37717 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37718 12 2.96162 3.60830 0.11494 3.51511 12 - -
37719 1.38629 1.38629 1.38629 1.38629
37720 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37721 13 0.13925 3.40055 2.81508 3.30414 13 - -
37722 1.38629 1.38629 1.38629 1.38629
37723 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37724 14 2.96162 3.60830 0.11494 3.51511 14 - -
37725 1.38629 1.38629 1.38629 1.38629
37726 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37727 15 3.45647 0.12746 3.50493 2.84597 15 - -
37728 1.38629 1.38629 1.38629 1.38629
37729 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37730 16 0.13925 3.40055 2.81508 3.30414 16 - -
37731 1.38629 1.38629 1.38629 1.38629
37732 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37733 17 2.96162 3.60830 0.11494 3.51511 17 - -
37734 1.38629 1.38629 1.38629 1.38629
37735 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37736 18 2.96162 3.60830 0.11494 3.51511 18 - -
37737 1.38629 1.38629 1.38629 1.38629
37738 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37739 19 3.45647 0.12746 3.50493 2.84597 19 - -
37740 1.38629 1.38629 1.38629 1.38629
37741 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37742 20 0.13925 3.40055 2.81508 3.30414 20 - -
37743 1.38629 1.38629 1.38629 1.38629
37744 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37745 21 0.13925 3.40055 2.81508 3.30414 21 - -
37746 1.38629 1.38629 1.38629 1.38629
37747 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37748 22 2.96162 3.60830 0.11494 3.51511 22 - -
37749 1.38629 1.38629 1.38629 1.38629
37750 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37751 23 0.13925 3.40055 2.81508 3.30414 23 - -
37752 1.38629 1.38629 1.38629 1.38629
37753 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37754 24 2.61564 1.57295 2.68080 0.42934 24 - -
37755 1.38629 1.38629 1.38629 1.38629
37756 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37757 25 3.10913 2.60819 3.15650 0.17540 25 - -
37758 1.38629 1.38629 1.38629 1.38629
37759 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37760 26 0.13925 3.40055 2.81508 3.30414 26 - -
37761 1.38629 1.38629 1.38629 1.38629
37762 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37763 27 3.45647 0.12746 3.50493 2.84597 27 - -
37764 1.38629 1.38629 1.38629 1.38629
37765 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37766 28 3.45647 0.12746 3.50493 2.84597 28 - -
37767 1.38629 1.38629 1.38629 1.38629
37768 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37769 29 3.45647 0.12746 3.50493 2.84597 29 - -
37770 1.38629 1.38629 1.38629 1.38629
37771 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37772 30 2.96162 3.60830 0.11494 3.51511 30 - -
37773 1.38629 1.38629 1.38629 1.38629
37774 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37775 31 3.45647 0.12746 3.50493 2.84597 31 - -
37776 1.38629 1.38629 1.38629 1.38629
37777 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37778 32 2.61564 1.57295 2.68080 0.42934 32 - -
37779 1.38629 1.38629 1.38629 1.38629
37780 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37781 33 0.13925 3.40055 2.81508 3.30414 33 - -
37782 1.38629 1.38629 1.38629 1.38629
37783 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37784 34 0.13925 3.40055 2.81508 3.30414 34 - -
37785 1.38629 1.38629 1.38629 1.38629
37786 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37787 35 0.13925 3.40055 2.81508 3.30414 35 - -
37788 1.38629 1.38629 1.38629 1.38629
37789 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37790 36 3.10913 2.60819 3.15650 0.17540 36 - -
37791 1.38629 1.38629 1.38629 1.38629
37792 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37793 37 3.10913 2.60819 3.15650 0.17540 37 - -
37794 1.38629 1.38629 1.38629 1.38629
37795 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37796 38 3.10913 2.60819 3.15650 0.17540 38 - -
37797 1.38629 1.38629 1.38629 1.38629
37798 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37799 39 0.13925 3.40055 2.81508 3.30414 39 - -
37800 1.38629 1.38629 1.38629 1.38629
37801 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37802 40 0.13925 3.40055 2.81508 3.30414 40 - -
37803 1.38629 1.38629 1.38629 1.38629
37804 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37805 41 2.96162 3.60830 0.11494 3.51511 41 - -
37806 1.38629 1.38629 1.38629 1.38629
37807 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37808 42 3.45647 0.12746 3.50493 2.84597 42 - -
37809 1.38629 1.38629 1.38629 1.38629
37810 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37811 43 0.13925 3.40055 2.81508 3.30414 43 - -
37812 1.38629 1.38629 1.38629 1.38629
37813 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37814 44 3.10913 2.60819 3.15650 0.17540 44 - -
37815 1.38629 1.38629 1.38629 1.38629
37816 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
37817 45 0.13925 3.40055 2.81508 3.30414 45 - -
37818 1.38629 1.38629 1.38629 1.38629
37819 0.01839 4.00492 * 1.46634 0.26236 0.00000 *
37820 //
37821 HMMER3/b [3.0 | March 2010]
37822 NAME 4_LSU_Metazoa_4_LSU_start_fivea_long
37823 LENG 45
37824 ALPH DNA
37825 RF no
37826 CS no
37827 MAP yes
37828 DATE Mon Feb 27 22:51:55 2012
37829 NSEQ 33
37830 EFFN 3.323364
37831 CKSUM 2448807355
37832 STATS LOCAL MSV -8.2738 0.71933
37833 STATS LOCAL VITERBI -7.5799 0.71933
37834 STATS LOCAL FORWARD -4.1726 0.71933
37835 HMM A C G T
37836 m->m m->i m->d i->m i->i d->m d->d
37837 COMPO 1.27412 1.31929 1.52432 1.44720
37838 1.38629 1.38629 1.38629 1.38629
37839 0.03688 4.01157 4.01157 1.46634 0.26236 0.00000 *
37840 1 2.16430 2.15934 2.34011 0.39534 1 - -
37841 1.38629 1.38629 1.38629 1.38629
37842 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37843 2 3.43336 0.13018 3.48281 2.82918 2 - -
37844 1.38629 1.38629 1.38629 1.38629
37845 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37846 3 3.08883 2.59528 3.13698 0.17864 3 - -
37847 1.38629 1.38629 1.38629 1.38629
37848 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37849 4 3.08883 2.59528 3.13698 0.17864 4 - -
37850 1.38629 1.38629 1.38629 1.38629
37851 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37852 5 2.94768 3.58798 0.11714 3.49267 5 - -
37853 1.38629 1.38629 1.38629 1.38629
37854 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37855 6 0.14187 3.38048 2.80207 3.28217 6 - -
37856 1.38629 1.38629 1.38629 1.38629
37857 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37858 7 3.43336 0.13018 3.48281 2.82918 7 - -
37859 1.38629 1.38629 1.38629 1.38629
37860 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37861 8 3.43336 0.13018 3.48281 2.82918 8 - -
37862 1.38629 1.38629 1.38629 1.38629
37863 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37864 9 3.08883 2.59528 3.13698 0.17864 9 - -
37865 1.38629 1.38629 1.38629 1.38629
37866 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37867 10 3.43336 0.13018 3.48281 2.82918 10 - -
37868 1.38629 1.38629 1.38629 1.38629
37869 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37870 11 0.14187 3.38048 2.80207 3.28217 11 - -
37871 1.38629 1.38629 1.38629 1.38629
37872 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37873 12 2.94768 3.58798 0.11714 3.49267 12 - -
37874 1.38629 1.38629 1.38629 1.38629
37875 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37876 13 0.14187 3.38048 2.80207 3.28217 13 - -
37877 1.38629 1.38629 1.38629 1.38629
37878 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37879 14 3.08883 2.59528 3.13698 0.17864 14 - -
37880 1.38629 1.38629 1.38629 1.38629
37881 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37882 15 3.43336 0.13018 3.48281 2.82918 15 - -
37883 1.38629 1.38629 1.38629 1.38629
37884 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37885 16 0.14187 3.38048 2.80207 3.28217 16 - -
37886 1.38629 1.38629 1.38629 1.38629
37887 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37888 17 2.94768 3.58798 0.11714 3.49267 17 - -
37889 1.38629 1.38629 1.38629 1.38629
37890 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37891 18 2.94768 3.58798 0.11714 3.49267 18 - -
37892 1.38629 1.38629 1.38629 1.38629
37893 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37894 19 3.43336 0.13018 3.48281 2.82918 19 - -
37895 1.38629 1.38629 1.38629 1.38629
37896 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37897 20 0.14187 3.38048 2.80207 3.28217 20 - -
37898 1.38629 1.38629 1.38629 1.38629
37899 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37900 21 0.14187 3.38048 2.80207 3.28217 21 - -
37901 1.38629 1.38629 1.38629 1.38629
37902 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37903 22 2.94768 3.58798 0.11714 3.49267 22 - -
37904 1.38629 1.38629 1.38629 1.38629
37905 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37906 23 2.94768 3.58798 0.11714 3.49267 23 - -
37907 1.38629 1.38629 1.38629 1.38629
37908 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37909 24 3.43336 0.13018 3.48281 2.82918 24 - -
37910 1.38629 1.38629 1.38629 1.38629
37911 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37912 25 3.08883 2.59528 3.13698 0.17864 25 - -
37913 1.38629 1.38629 1.38629 1.38629
37914 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37915 26 0.14187 3.38048 2.80207 3.28217 26 - -
37916 1.38629 1.38629 1.38629 1.38629
37917 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37918 27 3.43336 0.13018 3.48281 2.82918 27 - -
37919 1.38629 1.38629 1.38629 1.38629
37920 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37921 28 3.43336 0.13018 3.48281 2.82918 28 - -
37922 1.38629 1.38629 1.38629 1.38629
37923 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37924 29 3.43336 0.13018 3.48281 2.82918 29 - -
37925 1.38629 1.38629 1.38629 1.38629
37926 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37927 30 2.94768 3.58798 0.11714 3.49267 30 - -
37928 1.38629 1.38629 1.38629 1.38629
37929 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37930 31 3.43336 0.13018 3.48281 2.82918 31 - -
37931 1.38629 1.38629 1.38629 1.38629
37932 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37933 32 3.08883 2.59528 3.13698 0.17864 32 - -
37934 1.38629 1.38629 1.38629 1.38629
37935 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37936 33 2.94768 3.58798 0.11714 3.49267 33 - -
37937 1.38629 1.38629 1.38629 1.38629
37938 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37939 34 0.14187 3.38048 2.80207 3.28217 34 - -
37940 1.38629 1.38629 1.38629 1.38629
37941 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37942 35 0.14187 3.38048 2.80207 3.28217 35 - -
37943 1.38629 1.38629 1.38629 1.38629
37944 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37945 36 3.08883 2.59528 3.13698 0.17864 36 - -
37946 1.38629 1.38629 1.38629 1.38629
37947 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37948 37 3.08883 2.59528 3.13698 0.17864 37 - -
37949 1.38629 1.38629 1.38629 1.38629
37950 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37951 38 3.08883 2.59528 3.13698 0.17864 38 - -
37952 1.38629 1.38629 1.38629 1.38629
37953 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37954 39 0.14187 3.38048 2.80207 3.28217 39 - -
37955 1.38629 1.38629 1.38629 1.38629
37956 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37957 40 0.14187 3.38048 2.80207 3.28217 40 - -
37958 1.38629 1.38629 1.38629 1.38629
37959 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37960 41 2.94768 3.58798 0.11714 3.49267 41 - -
37961 1.38629 1.38629 1.38629 1.38629
37962 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37963 42 3.43336 0.13018 3.48281 2.82918 42 - -
37964 1.38629 1.38629 1.38629 1.38629
37965 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37966 43 0.14187 3.38048 2.80207 3.28217 43 - -
37967 1.38629 1.38629 1.38629 1.38629
37968 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37969 44 3.08883 2.59528 3.13698 0.17864 44 - -
37970 1.38629 1.38629 1.38629 1.38629
37971 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547
37972 45 0.14187 3.38048 2.80207 3.28217 45 - -
37973 1.38629 1.38629 1.38629 1.38629
37974 0.01861 3.99330 * 1.46634 0.26236 0.00000 *
37975 //
37976 HMMER3/b [3.0 | March 2010]
37977 NAME 4_LSU_Metazoa_4_LSU_start_fiveb_long
37978 LENG 45
37979 ALPH DNA
37980 RF no
37981 CS no
37982 MAP yes
37983 DATE Mon Feb 27 22:52:02 2012
37984 NSEQ 6
37985 EFFN 3.290039
37986 CKSUM 1095388467
37987 STATS LOCAL MSV -8.1640 0.71933
37988 STATS LOCAL VITERBI -7.6720 0.71933
37989 STATS LOCAL FORWARD -4.1206 0.71933
37990 HMM A C G T
37991 m->m m->i m->d i->m i->i d->m d->d
37992 COMPO 1.22038 1.38745 1.60911 1.36608
37993 1.38629 1.38629 1.38629 1.38629
37994 0.03711 4.00552 4.00552 1.46634 0.26236 0.00000 *
37995 1 3.07802 2.58840 3.12657 0.18039 1 - -
37996 1.38629 1.38629 1.38629 1.38629
37997 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
37998 2 3.07802 2.58840 3.12657 0.18039 2 - -
37999 1.38629 1.38629 1.38629 1.38629
38000 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38001 3 3.07802 2.58840 3.12657 0.18039 3 - -
38002 1.38629 1.38629 1.38629 1.38629
38003 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38004 4 3.07802 2.58840 3.12657 0.18039 4 - -
38005 1.38629 1.38629 1.38629 1.38629
38006 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38007 5 2.94018 3.57708 0.11833 3.48065 5 - -
38008 1.38629 1.38629 1.38629 1.38629
38009 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38010 6 0.14329 3.36976 2.79509 3.27043 6 - -
38011 1.38629 1.38629 1.38629 1.38629
38012 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38013 7 3.42100 0.13166 3.47097 2.82017 7 - -
38014 1.38629 1.38629 1.38629 1.38629
38015 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38016 8 3.42100 0.13166 3.47097 2.82017 8 - -
38017 1.38629 1.38629 1.38629 1.38629
38018 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38019 9 3.07802 2.58840 3.12657 0.18039 9 - -
38020 1.38629 1.38629 1.38629 1.38629
38021 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38022 10 3.42100 0.13166 3.47097 2.82017 10 - -
38023 1.38629 1.38629 1.38629 1.38629
38024 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38025 11 0.14329 3.36976 2.79509 3.27043 11 - -
38026 1.38629 1.38629 1.38629 1.38629
38027 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38028 12 2.94018 3.57708 0.11833 3.48065 12 - -
38029 1.38629 1.38629 1.38629 1.38629
38030 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38031 13 0.14329 3.36976 2.79509 3.27043 13 - -
38032 1.38629 1.38629 1.38629 1.38629
38033 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38034 14 3.07802 2.58840 3.12657 0.18039 14 - -
38035 1.38629 1.38629 1.38629 1.38629
38036 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38037 15 3.42100 0.13166 3.47097 2.82017 15 - -
38038 1.38629 1.38629 1.38629 1.38629
38039 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38040 16 0.14329 3.36976 2.79509 3.27043 16 - -
38041 1.38629 1.38629 1.38629 1.38629
38042 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38043 17 2.94018 3.57708 0.11833 3.48065 17 - -
38044 1.38629 1.38629 1.38629 1.38629
38045 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38046 18 2.94018 3.57708 0.11833 3.48065 18 - -
38047 1.38629 1.38629 1.38629 1.38629
38048 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38049 19 3.42100 0.13166 3.47097 2.82017 19 - -
38050 1.38629 1.38629 1.38629 1.38629
38051 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38052 20 0.14329 3.36976 2.79509 3.27043 20 - -
38053 1.38629 1.38629 1.38629 1.38629
38054 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38055 21 0.14329 3.36976 2.79509 3.27043 21 - -
38056 1.38629 1.38629 1.38629 1.38629
38057 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38058 22 2.94018 3.57708 0.11833 3.48065 22 - -
38059 1.38629 1.38629 1.38629 1.38629
38060 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38061 23 0.14329 3.36976 2.79509 3.27043 23 - -
38062 1.38629 1.38629 1.38629 1.38629
38063 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38064 24 3.42100 0.13166 3.47097 2.82017 24 - -
38065 1.38629 1.38629 1.38629 1.38629
38066 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38067 25 3.07802 2.58840 3.12657 0.18039 25 - -
38068 1.38629 1.38629 1.38629 1.38629
38069 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38070 26 0.14329 3.36976 2.79509 3.27043 26 - -
38071 1.38629 1.38629 1.38629 1.38629
38072 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38073 27 3.42100 0.13166 3.47097 2.82017 27 - -
38074 1.38629 1.38629 1.38629 1.38629
38075 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38076 28 3.42100 0.13166 3.47097 2.82017 28 - -
38077 1.38629 1.38629 1.38629 1.38629
38078 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38079 29 3.42100 0.13166 3.47097 2.82017 29 - -
38080 1.38629 1.38629 1.38629 1.38629
38081 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38082 30 2.94018 3.57708 0.11833 3.48065 30 - -
38083 1.38629 1.38629 1.38629 1.38629
38084 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38085 31 3.42100 0.13166 3.47097 2.82017 31 - -
38086 1.38629 1.38629 1.38629 1.38629
38087 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38088 32 3.07802 2.58840 3.12657 0.18039 32 - -
38089 1.38629 1.38629 1.38629 1.38629
38090 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38091 33 2.94018 3.57708 0.11833 3.48065 33 - -
38092 1.38629 1.38629 1.38629 1.38629
38093 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38094 34 0.14329 3.36976 2.79509 3.27043 34 - -
38095 1.38629 1.38629 1.38629 1.38629
38096 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38097 35 0.14329 3.36976 2.79509 3.27043 35 - -
38098 1.38629 1.38629 1.38629 1.38629
38099 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38100 36 3.07802 2.58840 3.12657 0.18039 36 - -
38101 1.38629 1.38629 1.38629 1.38629
38102 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38103 37 3.07802 2.58840 3.12657 0.18039 37 - -
38104 1.38629 1.38629 1.38629 1.38629
38105 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38106 38 3.07802 2.58840 3.12657 0.18039 38 - -
38107 1.38629 1.38629 1.38629 1.38629
38108 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38109 39 0.14329 3.36976 2.79509 3.27043 39 - -
38110 1.38629 1.38629 1.38629 1.38629
38111 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38112 40 0.14329 3.36976 2.79509 3.27043 40 - -
38113 1.38629 1.38629 1.38629 1.38629
38114 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38115 41 2.94018 3.57708 0.11833 3.48065 41 - -
38116 1.38629 1.38629 1.38629 1.38629
38117 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38118 42 3.42100 0.13166 3.47097 2.82017 42 - -
38119 1.38629 1.38629 1.38629 1.38629
38120 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38121 43 0.14329 3.36976 2.79509 3.27043 43 - -
38122 1.38629 1.38629 1.38629 1.38629
38123 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38124 44 3.07802 2.58840 3.12657 0.18039 44 - -
38125 1.38629 1.38629 1.38629 1.38629
38126 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547
38127 45 0.14329 3.36976 2.79509 3.27043 45 - -
38128 1.38629 1.38629 1.38629 1.38629
38129 0.01873 3.98714 * 1.46634 0.26236 0.00000 *
38130 //
38131 HMMER3/b [3.0 | March 2010]
38132 NAME 4_LSU_Metazoa_4_LSU_start_fivec_long
38133 LENG 45
38134 ALPH DNA
38135 RF no
38136 CS no
38137 MAP yes
38138 DATE Mon Feb 27 22:52:10 2012
38139 NSEQ 3
38140 EFFN 3.000000
38141 CKSUM 414395773
38142 STATS LOCAL MSV -8.1682 0.72059
38143 STATS LOCAL VITERBI -7.7080 0.72059
38144 STATS LOCAL FORWARD -4.1086 0.72059
38145 HMM A C G T
38146 m->m m->i m->d i->m i->i d->m d->d
38147 COMPO 1.39094 1.26436 1.40758 1.49610
38148 1.38629 1.38629 1.38629 1.38629
38149 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
38150 1 2.97980 2.52563 3.03204 0.19727 1 - -
38151 1.38629 1.38629 1.38629 1.38629
38152 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38153 2 3.30705 0.14631 3.36166 2.73626 2 - -
38154 1.38629 1.38629 1.38629 1.38629
38155 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38156 3 2.97980 2.52563 3.03204 0.19727 3 - -
38157 1.38629 1.38629 1.38629 1.38629
38158 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38159 4 2.97980 2.52563 3.03204 0.19727 4 - -
38160 1.38629 1.38629 1.38629 1.38629
38161 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38162 5 2.86982 3.47591 0.13017 3.36931 5 - -
38163 1.38629 1.38629 1.38629 1.38629
38164 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38165 6 0.15719 3.27118 2.73043 3.16274 6 - -
38166 1.38629 1.38629 1.38629 1.38629
38167 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38168 7 3.30705 0.14631 3.36166 2.73626 7 - -
38169 1.38629 1.38629 1.38629 1.38629
38170 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38171 8 3.30705 0.14631 3.36166 2.73626 8 - -
38172 1.38629 1.38629 1.38629 1.38629
38173 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38174 9 2.97980 2.52563 3.03204 0.19727 9 - -
38175 1.38629 1.38629 1.38629 1.38629
38176 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38177 10 3.30705 0.14631 3.36166 2.73626 10 - -
38178 1.38629 1.38629 1.38629 1.38629
38179 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38180 11 0.15719 3.27118 2.73043 3.16274 11 - -
38181 1.38629 1.38629 1.38629 1.38629
38182 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38183 12 2.86982 3.47591 0.13017 3.36931 12 - -
38184 1.38629 1.38629 1.38629 1.38629
38185 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38186 13 0.15719 3.27118 2.73043 3.16274 13 - -
38187 1.38629 1.38629 1.38629 1.38629
38188 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38189 14 2.97980 2.52563 3.03204 0.19727 14 - -
38190 1.38629 1.38629 1.38629 1.38629
38191 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38192 15 3.30705 0.14631 3.36166 2.73626 15 - -
38193 1.38629 1.38629 1.38629 1.38629
38194 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38195 16 2.86982 3.47591 0.13017 3.36931 16 - -
38196 1.38629 1.38629 1.38629 1.38629
38197 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38198 17 2.86982 3.47591 0.13017 3.36931 17 - -
38199 1.38629 1.38629 1.38629 1.38629
38200 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38201 18 2.86982 3.47591 0.13017 3.36931 18 - -
38202 1.38629 1.38629 1.38629 1.38629
38203 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38204 19 3.30705 0.14631 3.36166 2.73626 19 - -
38205 1.38629 1.38629 1.38629 1.38629
38206 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38207 20 1.34853 2.58976 0.54705 2.44542 20 - -
38208 1.38629 1.38629 1.38629 1.38629
38209 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38210 21 0.15719 3.27118 2.73043 3.16274 21 - -
38211 1.38629 1.38629 1.38629 1.38629
38212 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38213 22 2.86982 3.47591 0.13017 3.36931 22 - -
38214 1.38629 1.38629 1.38629 1.38629
38215 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38216 23 2.86982 3.47591 0.13017 3.36931 23 - -
38217 1.38629 1.38629 1.38629 1.38629
38218 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38219 24 3.30705 0.14631 3.36166 2.73626 24 - -
38220 1.38629 1.38629 1.38629 1.38629
38221 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38222 25 3.30705 0.14631 3.36166 2.73626 25 - -
38223 1.38629 1.38629 1.38629 1.38629
38224 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38225 26 0.15719 3.27118 2.73043 3.16274 26 - -
38226 1.38629 1.38629 1.38629 1.38629
38227 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38228 27 3.30705 0.14631 3.36166 2.73626 27 - -
38229 1.38629 1.38629 1.38629 1.38629
38230 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38231 28 3.30705 0.14631 3.36166 2.73626 28 - -
38232 1.38629 1.38629 1.38629 1.38629
38233 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38234 29 3.30705 0.14631 3.36166 2.73626 29 - -
38235 1.38629 1.38629 1.38629 1.38629
38236 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38237 30 2.86982 3.47591 0.13017 3.36931 30 - -
38238 1.38629 1.38629 1.38629 1.38629
38239 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38240 31 3.30705 0.14631 3.36166 2.73626 31 - -
38241 1.38629 1.38629 1.38629 1.38629
38242 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38243 32 2.97980 2.52563 3.03204 0.19727 32 - -
38244 1.38629 1.38629 1.38629 1.38629
38245 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38246 33 2.86982 3.47591 0.13017 3.36931 33 - -
38247 1.38629 1.38629 1.38629 1.38629
38248 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38249 34 0.15719 3.27118 2.73043 3.16274 34 - -
38250 1.38629 1.38629 1.38629 1.38629
38251 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38252 35 0.15719 3.27118 2.73043 3.16274 35 - -
38253 1.38629 1.38629 1.38629 1.38629
38254 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38255 36 2.97980 2.52563 3.03204 0.19727 36 - -
38256 1.38629 1.38629 1.38629 1.38629
38257 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38258 37 2.97980 2.52563 3.03204 0.19727 37 - -
38259 1.38629 1.38629 1.38629 1.38629
38260 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38261 38 2.97980 2.52563 3.03204 0.19727 38 - -
38262 1.38629 1.38629 1.38629 1.38629
38263 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38264 39 0.15719 3.27118 2.73043 3.16274 39 - -
38265 1.38629 1.38629 1.38629 1.38629
38266 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38267 40 0.15719 3.27118 2.73043 3.16274 40 - -
38268 1.38629 1.38629 1.38629 1.38629
38269 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38270 41 2.86982 3.47591 0.13017 3.36931 41 - -
38271 1.38629 1.38629 1.38629 1.38629
38272 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38273 42 3.30705 0.14631 3.36166 2.73626 42 - -
38274 1.38629 1.38629 1.38629 1.38629
38275 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38276 43 0.15719 3.27118 2.73043 3.16274 43 - -
38277 1.38629 1.38629 1.38629 1.38629
38278 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38279 44 2.97980 2.52563 3.03204 0.19727 44 - -
38280 1.38629 1.38629 1.38629 1.38629
38281 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38282 45 0.15719 3.27118 2.73043 3.16274 45 - -
38283 1.38629 1.38629 1.38629 1.38629
38284 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
38285 //
38286 HMMER3/b [3.0 | March 2010]
38287 NAME 4_LSU_Metazoa_4_LSU_start_fived_long
38288 LENG 45
38289 ALPH DNA
38290 RF no
38291 CS no
38292 MAP yes
38293 DATE Mon Feb 27 22:52:18 2012
38294 NSEQ 4
38295 EFFN 3.589844
38296 CKSUM 1898865493
38297 STATS LOCAL MSV -7.7769 0.71931
38298 STATS LOCAL VITERBI -7.5481 0.71931
38299 STATS LOCAL FORWARD -4.2512 0.71931
38300 HMM A C G T
38301 m->m m->i m->d i->m i->i d->m d->d
38302 COMPO 1.28279 1.32952 1.52116 1.42847
38303 1.38629 1.38629 1.38629 1.38629
38304 0.03515 4.05869 4.05869 1.46634 0.26236 0.00000 *
38305 1 2.65559 1.56074 2.72005 0.42482 1 - -
38306 1.38629 1.38629 1.38629 1.38629
38307 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38308 2 1.56999 0.53851 2.39137 2.14706 2 - -
38309 1.38629 1.38629 1.38629 1.38629
38310 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38311 3 3.17200 2.64808 3.21693 0.16580 3 - -
38312 1.38629 1.38629 1.38629 1.38629
38313 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38314 4 3.17200 2.64808 3.21693 0.16580 4 - -
38315 1.38629 1.38629 1.38629 1.38629
38316 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38317 5 3.00379 3.67013 0.10853 3.58350 5 - -
38318 1.38629 1.38629 1.38629 1.38629
38319 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38320 6 0.13155 3.46211 2.85483 3.37163 6 - -
38321 1.38629 1.38629 1.38629 1.38629
38322 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38323 7 3.52715 0.11953 3.57252 2.89697 7 - -
38324 1.38629 1.38629 1.38629 1.38629
38325 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38326 8 3.52715 0.11953 3.57252 2.89697 8 - -
38327 1.38629 1.38629 1.38629 1.38629
38328 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38329 9 3.17200 2.64808 3.21693 0.16580 9 - -
38330 1.38629 1.38629 1.38629 1.38629
38331 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38332 10 3.52715 0.11953 3.57252 2.89697 10 - -
38333 1.38629 1.38629 1.38629 1.38629
38334 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38335 11 0.13155 3.46211 2.85483 3.37163 11 - -
38336 1.38629 1.38629 1.38629 1.38629
38337 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38338 12 3.00379 3.67013 0.10853 3.58350 12 - -
38339 1.38629 1.38629 1.38629 1.38629
38340 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38341 13 0.13155 3.46211 2.85483 3.37163 13 - -
38342 1.38629 1.38629 1.38629 1.38629
38343 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38344 14 3.17200 2.64808 3.21693 0.16580 14 - -
38345 1.38629 1.38629 1.38629 1.38629
38346 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38347 15 3.52715 0.11953 3.57252 2.89697 15 - -
38348 1.38629 1.38629 1.38629 1.38629
38349 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38350 16 0.13155 3.46211 2.85483 3.37163 16 - -
38351 1.38629 1.38629 1.38629 1.38629
38352 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38353 17 3.00379 3.67013 0.10853 3.58350 17 - -
38354 1.38629 1.38629 1.38629 1.38629
38355 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38356 18 3.00379 3.67013 0.10853 3.58350 18 - -
38357 1.38629 1.38629 1.38629 1.38629
38358 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38359 19 3.52715 0.11953 3.57252 2.89697 19 - -
38360 1.38629 1.38629 1.38629 1.38629
38361 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38362 20 0.13155 3.46211 2.85483 3.37163 20 - -
38363 1.38629 1.38629 1.38629 1.38629
38364 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38365 21 0.13155 3.46211 2.85483 3.37163 21 - -
38366 1.38629 1.38629 1.38629 1.38629
38367 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38368 22 3.00379 3.67013 0.10853 3.58350 22 - -
38369 1.38629 1.38629 1.38629 1.38629
38370 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38371 23 3.00379 3.67013 0.10853 3.58350 23 - -
38372 1.38629 1.38629 1.38629 1.38629
38373 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38374 24 3.52715 0.11953 3.57252 2.89697 24 - -
38375 1.38629 1.38629 1.38629 1.38629
38376 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38377 25 3.17200 2.64808 3.21693 0.16580 25 - -
38378 1.38629 1.38629 1.38629 1.38629
38379 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38380 26 0.13155 3.46211 2.85483 3.37163 26 - -
38381 1.38629 1.38629 1.38629 1.38629
38382 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38383 27 3.52715 0.11953 3.57252 2.89697 27 - -
38384 1.38629 1.38629 1.38629 1.38629
38385 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38386 28 3.52715 0.11953 3.57252 2.89697 28 - -
38387 1.38629 1.38629 1.38629 1.38629
38388 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38389 29 3.52715 0.11953 3.57252 2.89697 29 - -
38390 1.38629 1.38629 1.38629 1.38629
38391 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38392 30 3.00379 3.67013 0.10853 3.58350 30 - -
38393 1.38629 1.38629 1.38629 1.38629
38394 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38395 31 3.52715 0.11953 3.57252 2.89697 31 - -
38396 1.38629 1.38629 1.38629 1.38629
38397 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38398 32 3.17200 2.64808 3.21693 0.16580 32 - -
38399 1.38629 1.38629 1.38629 1.38629
38400 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38401 33 3.00379 3.67013 0.10853 3.58350 33 - -
38402 1.38629 1.38629 1.38629 1.38629
38403 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38404 34 0.51549 2.41965 2.31139 1.53844 34 - -
38405 1.38629 1.38629 1.38629 1.38629
38406 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38407 35 0.13155 3.46211 2.85483 3.37163 35 - -
38408 1.38629 1.38629 1.38629 1.38629
38409 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38410 36 3.17200 2.64808 3.21693 0.16580 36 - -
38411 1.38629 1.38629 1.38629 1.38629
38412 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38413 37 3.17200 2.64808 3.21693 0.16580 37 - -
38414 1.38629 1.38629 1.38629 1.38629
38415 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38416 38 3.17200 2.64808 3.21693 0.16580 38 - -
38417 1.38629 1.38629 1.38629 1.38629
38418 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38419 39 0.13155 3.46211 2.85483 3.37163 39 - -
38420 1.38629 1.38629 1.38629 1.38629
38421 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38422 40 0.13155 3.46211 2.85483 3.37163 40 - -
38423 1.38629 1.38629 1.38629 1.38629
38424 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38425 41 3.00379 3.67013 0.10853 3.58350 41 - -
38426 1.38629 1.38629 1.38629 1.38629
38427 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38428 42 3.52715 0.11953 3.57252 2.89697 42 - -
38429 1.38629 1.38629 1.38629 1.38629
38430 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38431 43 0.13155 3.46211 2.85483 3.37163 43 - -
38432 1.38629 1.38629 1.38629 1.38629
38433 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38434 44 3.17200 2.64808 3.21693 0.16580 44 - -
38435 1.38629 1.38629 1.38629 1.38629
38436 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547
38437 45 0.13155 3.46211 2.85483 3.37163 45 - -
38438 1.38629 1.38629 1.38629 1.38629
38439 0.01773 4.04127 * 1.46634 0.26236 0.00000 *
38440 //
38441 HMMER3/b [3.0 | March 2010]
38442 NAME 4_LSU_Metazoa_4_LSU_start_fivee_long
38443 LENG 45
38444 ALPH DNA
38445 RF no
38446 CS no
38447 MAP yes
38448 DATE Mon Feb 27 22:52:24 2012
38449 NSEQ 18
38450 EFFN 3.440918
38451 CKSUM 2904005102
38452 STATS LOCAL MSV -7.8258 0.71932
38453 STATS LOCAL VITERBI -7.5534 0.71932
38454 STATS LOCAL FORWARD -4.0810 0.71932
38455 HMM A C G T
38456 m->m m->i m->d i->m i->i d->m d->d
38457 COMPO 1.15979 1.37418 1.69811 1.38480
38458 1.38629 1.38629 1.38629 1.38629
38459 0.03610 4.03263 4.03263 1.46634 0.26236 0.00000 *
38460 1 2.65643 1.62968 2.72042 0.40352 1 - -
38461 1.38629 1.38629 1.38629 1.38629
38462 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38463 2 3.22289 0.18400 3.27858 2.40191 2 - -
38464 1.38629 1.38629 1.38629 1.38629
38465 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38466 3 3.12623 2.61905 3.17294 0.17273 3 - -
38467 1.38629 1.38629 1.38629 1.38629
38468 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38469 4 3.12623 2.61905 3.17294 0.17273 4 - -
38470 1.38629 1.38629 1.38629 1.38629
38471 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38472 5 0.13709 3.41738 2.82598 3.32258 5 - -
38473 1.38629 1.38629 1.38629 1.38629
38474 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38475 6 0.13709 3.41738 2.82598 3.32258 6 - -
38476 1.38629 1.38629 1.38629 1.38629
38477 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38478 7 3.47583 0.12523 3.52346 2.85999 7 - -
38479 1.38629 1.38629 1.38629 1.38629
38480 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38481 8 3.47583 0.12523 3.52346 2.85999 8 - -
38482 1.38629 1.38629 1.38629 1.38629
38483 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38484 9 3.12623 2.61905 3.17294 0.17273 9 - -
38485 1.38629 1.38629 1.38629 1.38629
38486 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38487 10 3.47583 0.12523 3.52346 2.85999 10 - -
38488 1.38629 1.38629 1.38629 1.38629
38489 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38490 11 0.13709 3.41738 2.82598 3.32258 11 - -
38491 1.38629 1.38629 1.38629 1.38629
38492 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38493 12 2.97325 3.62528 0.11314 3.53388 12 - -
38494 1.38629 1.38629 1.38629 1.38629
38495 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38496 13 0.13709 3.41738 2.82598 3.32258 13 - -
38497 1.38629 1.38629 1.38629 1.38629
38498 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38499 14 3.12623 2.61905 3.17294 0.17273 14 - -
38500 1.38629 1.38629 1.38629 1.38629
38501 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38502 15 3.47583 0.12523 3.52346 2.85999 15 - -
38503 1.38629 1.38629 1.38629 1.38629
38504 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38505 16 0.13709 3.41738 2.82598 3.32258 16 - -
38506 1.38629 1.38629 1.38629 1.38629
38507 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38508 17 2.97325 3.62528 0.11314 3.53388 17 - -
38509 1.38629 1.38629 1.38629 1.38629
38510 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38511 18 2.97325 3.62528 0.11314 3.53388 18 - -
38512 1.38629 1.38629 1.38629 1.38629
38513 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38514 19 3.47583 0.12523 3.52346 2.85999 19 - -
38515 1.38629 1.38629 1.38629 1.38629
38516 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38517 20 0.13709 3.41738 2.82598 3.32258 20 - -
38518 1.38629 1.38629 1.38629 1.38629
38519 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38520 21 0.13709 3.41738 2.82598 3.32258 21 - -
38521 1.38629 1.38629 1.38629 1.38629
38522 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38523 22 2.97325 3.62528 0.11314 3.53388 22 - -
38524 1.38629 1.38629 1.38629 1.38629
38525 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38526 23 0.13709 3.41738 2.82598 3.32258 23 - -
38527 1.38629 1.38629 1.38629 1.38629
38528 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38529 24 2.85715 2.02037 2.91409 0.28010 24 - -
38530 1.38629 1.38629 1.38629 1.38629
38531 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38532 25 3.12623 2.61905 3.17294 0.17273 25 - -
38533 1.38629 1.38629 1.38629 1.38629
38534 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38535 26 0.13709 3.41738 2.82598 3.32258 26 - -
38536 1.38629 1.38629 1.38629 1.38629
38537 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38538 27 3.47583 0.12523 3.52346 2.85999 27 - -
38539 1.38629 1.38629 1.38629 1.38629
38540 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38541 28 3.47583 0.12523 3.52346 2.85999 28 - -
38542 1.38629 1.38629 1.38629 1.38629
38543 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38544 29 3.47583 0.12523 3.52346 2.85999 29 - -
38545 1.38629 1.38629 1.38629 1.38629
38546 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38547 30 2.97325 3.62528 0.11314 3.53388 30 - -
38548 1.38629 1.38629 1.38629 1.38629
38549 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38550 31 3.47583 0.12523 3.52346 2.85999 31 - -
38551 1.38629 1.38629 1.38629 1.38629
38552 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38553 32 3.12623 2.61905 3.17294 0.17273 32 - -
38554 1.38629 1.38629 1.38629 1.38629
38555 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38556 33 2.97325 3.62528 0.11314 3.53388 33 - -
38557 1.38629 1.38629 1.38629 1.38629
38558 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38559 34 0.13709 3.41738 2.82598 3.32258 34 - -
38560 1.38629 1.38629 1.38629 1.38629
38561 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38562 35 0.13709 3.41738 2.82598 3.32258 35 - -
38563 1.38629 1.38629 1.38629 1.38629
38564 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38565 36 3.12623 2.61905 3.17294 0.17273 36 - -
38566 1.38629 1.38629 1.38629 1.38629
38567 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38568 37 3.12623 2.61905 3.17294 0.17273 37 - -
38569 1.38629 1.38629 1.38629 1.38629
38570 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38571 38 3.12623 2.61905 3.17294 0.17273 38 - -
38572 1.38629 1.38629 1.38629 1.38629
38573 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38574 39 0.13709 3.41738 2.82598 3.32258 39 - -
38575 1.38629 1.38629 1.38629 1.38629
38576 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38577 40 0.13709 3.41738 2.82598 3.32258 40 - -
38578 1.38629 1.38629 1.38629 1.38629
38579 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38580 41 2.97325 3.62528 0.11314 3.53388 41 - -
38581 1.38629 1.38629 1.38629 1.38629
38582 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38583 42 3.47583 0.12523 3.52346 2.85999 42 - -
38584 1.38629 1.38629 1.38629 1.38629
38585 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38586 43 0.13709 3.41738 2.82598 3.32258 43 - -
38587 1.38629 1.38629 1.38629 1.38629
38588 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38589 44 3.12623 2.61905 3.17294 0.17273 44 - -
38590 1.38629 1.38629 1.38629 1.38629
38591 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547
38592 45 0.13709 3.41738 2.82598 3.32258 45 - -
38593 1.38629 1.38629 1.38629 1.38629
38594 0.01821 4.01475 * 1.46634 0.26236 0.00000 *
38595 //
38596 HMMER3/b [3.0 | March 2010]
38597 NAME 4_LSU_Metazoa_4_LSU_start_fivef_long
38598 LENG 45
38599 ALPH DNA
38600 RF no
38601 CS no
38602 MAP yes
38603 DATE Mon Feb 27 22:52:31 2012
38604 NSEQ 4
38605 EFFN 3.238281
38606 CKSUM 218697528
38607 STATS LOCAL MSV -8.1769 0.71931
38608 STATS LOCAL VITERBI -7.6530 0.71931
38609 STATS LOCAL FORWARD -4.0168 0.71931
38610 HMM A C G T
38611 m->m m->i m->d i->m i->i d->m d->d
38612 COMPO 1.11219 1.32828 1.60560 1.58251
38613 1.38629 1.38629 1.38629 1.38629
38614 0.03747 3.99605 3.99605 1.46634 0.26236 0.00000 *
38615 1 3.40150 0.13404 3.45229 2.80593 1 - -
38616 1.38629 1.38629 1.38629 1.38629
38617 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38618 2 0.14557 3.35286 2.78409 3.25194 2 - -
38619 1.38629 1.38629 1.38629 1.38629
38620 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38621 3 0.14557 3.35286 2.78409 3.25194 3 - -
38622 1.38629 1.38629 1.38629 1.38629
38623 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38624 4 3.06103 2.57758 3.11024 0.18319 4 - -
38625 1.38629 1.38629 1.38629 1.38629
38626 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38627 5 2.92831 3.55987 0.12026 3.46167 5 - -
38628 1.38629 1.38629 1.38629 1.38629
38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38630 6 0.14557 3.35286 2.78409 3.25194 6 - -
38631 1.38629 1.38629 1.38629 1.38629
38632 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38633 7 3.40150 0.13404 3.45229 2.80593 7 - -
38634 1.38629 1.38629 1.38629 1.38629
38635 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38636 8 3.40150 0.13404 3.45229 2.80593 8 - -
38637 1.38629 1.38629 1.38629 1.38629
38638 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38639 9 3.06103 2.57758 3.11024 0.18319 9 - -
38640 1.38629 1.38629 1.38629 1.38629
38641 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38642 10 3.40150 0.13404 3.45229 2.80593 10 - -
38643 1.38629 1.38629 1.38629 1.38629
38644 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38645 11 0.14557 3.35286 2.78409 3.25194 11 - -
38646 1.38629 1.38629 1.38629 1.38629
38647 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38648 12 2.92831 3.55987 0.12026 3.46167 12 - -
38649 1.38629 1.38629 1.38629 1.38629
38650 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38651 13 0.14557 3.35286 2.78409 3.25194 13 - -
38652 1.38629 1.38629 1.38629 1.38629
38653 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38654 14 3.06103 2.57758 3.11024 0.18319 14 - -
38655 1.38629 1.38629 1.38629 1.38629
38656 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38657 15 3.40150 0.13404 3.45229 2.80593 15 - -
38658 1.38629 1.38629 1.38629 1.38629
38659 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38660 16 0.14557 3.35286 2.78409 3.25194 16 - -
38661 1.38629 1.38629 1.38629 1.38629
38662 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38663 17 2.92831 3.55987 0.12026 3.46167 17 - -
38664 1.38629 1.38629 1.38629 1.38629
38665 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38666 18 2.92831 3.55987 0.12026 3.46167 18 - -
38667 1.38629 1.38629 1.38629 1.38629
38668 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38669 19 3.40150 0.13404 3.45229 2.80593 19 - -
38670 1.38629 1.38629 1.38629 1.38629
38671 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38672 20 0.14557 3.35286 2.78409 3.25194 20 - -
38673 1.38629 1.38629 1.38629 1.38629
38674 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38675 21 0.14557 3.35286 2.78409 3.25194 21 - -
38676 1.38629 1.38629 1.38629 1.38629
38677 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38678 22 2.92831 3.55987 0.12026 3.46167 22 - -
38679 1.38629 1.38629 1.38629 1.38629
38680 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38681 23 0.14557 3.35286 2.78409 3.25194 23 - -
38682 1.38629 1.38629 1.38629 1.38629
38683 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38684 24 3.40150 0.13404 3.45229 2.80593 24 - -
38685 1.38629 1.38629 1.38629 1.38629
38686 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38687 25 3.06103 2.57758 3.11024 0.18319 25 - -
38688 1.38629 1.38629 1.38629 1.38629
38689 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38690 26 0.14557 3.35286 2.78409 3.25194 26 - -
38691 1.38629 1.38629 1.38629 1.38629
38692 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38693 27 3.40150 0.13404 3.45229 2.80593 27 - -
38694 1.38629 1.38629 1.38629 1.38629
38695 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38696 28 3.40150 0.13404 3.45229 2.80593 28 - -
38697 1.38629 1.38629 1.38629 1.38629
38698 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38699 29 3.40150 0.13404 3.45229 2.80593 29 - -
38700 1.38629 1.38629 1.38629 1.38629
38701 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38702 30 2.92831 3.55987 0.12026 3.46167 30 - -
38703 1.38629 1.38629 1.38629 1.38629
38704 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38705 31 3.40150 0.13404 3.45229 2.80593 31 - -
38706 1.38629 1.38629 1.38629 1.38629
38707 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38708 32 3.06103 2.57758 3.11024 0.18319 32 - -
38709 1.38629 1.38629 1.38629 1.38629
38710 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38711 33 2.92831 3.55987 0.12026 3.46167 33 - -
38712 1.38629 1.38629 1.38629 1.38629
38713 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38714 34 0.14557 3.35286 2.78409 3.25194 34 - -
38715 1.38629 1.38629 1.38629 1.38629
38716 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38717 35 0.14557 3.35286 2.78409 3.25194 35 - -
38718 1.38629 1.38629 1.38629 1.38629
38719 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38720 36 3.06103 2.57758 3.11024 0.18319 36 - -
38721 1.38629 1.38629 1.38629 1.38629
38722 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38723 37 3.06103 2.57758 3.11024 0.18319 37 - -
38724 1.38629 1.38629 1.38629 1.38629
38725 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38726 38 3.06103 2.57758 3.11024 0.18319 38 - -
38727 1.38629 1.38629 1.38629 1.38629
38728 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38729 39 0.14557 3.35286 2.78409 3.25194 39 - -
38730 1.38629 1.38629 1.38629 1.38629
38731 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38732 40 0.14557 3.35286 2.78409 3.25194 40 - -
38733 1.38629 1.38629 1.38629 1.38629
38734 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38735 41 2.92831 3.55987 0.12026 3.46167 41 - -
38736 1.38629 1.38629 1.38629 1.38629
38737 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38738 42 3.40150 0.13404 3.45229 2.80593 42 - -
38739 1.38629 1.38629 1.38629 1.38629
38740 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38741 43 0.14557 3.35286 2.78409 3.25194 43 - -
38742 1.38629 1.38629 1.38629 1.38629
38743 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38744 44 3.06103 2.57758 3.11024 0.18319 44 - -
38745 1.38629 1.38629 1.38629 1.38629
38746 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
38747 45 0.14557 3.35286 2.78409 3.25194 45 - -
38748 1.38629 1.38629 1.38629 1.38629
38749 0.01891 3.97749 * 1.46634 0.26236 0.00000 *
38750 //
38751 HMMER3/b [3.0 | March 2010]
38752 NAME 4_LSU_Metazoa_4_LSU_start_fiveg_long
38753 LENG 45
38754 ALPH DNA
38755 RF no
38756 CS no
38757 MAP yes
38758 DATE Mon Feb 27 22:52:38 2012
38759 NSEQ 3
38760 EFFN 3.000000
38761 CKSUM 117876825
38762 STATS LOCAL MSV -8.1355 0.72022
38763 STATS LOCAL VITERBI -7.5293 0.72022
38764 STATS LOCAL FORWARD -4.1705 0.72022
38765 HMM A C G T
38766 m->m m->i m->d i->m i->i d->m d->d
38767 COMPO 1.22000 1.46772 1.37224 1.51058
38768 1.38629 1.38629 1.38629 1.38629
38769 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
38770 1 2.86982 3.47591 0.13017 3.36931 1 - -
38771 1.38629 1.38629 1.38629 1.38629
38772 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38773 2 0.15719 3.27118 2.73043 3.16274 2 - -
38774 1.38629 1.38629 1.38629 1.38629
38775 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38776 3 2.97980 2.52563 3.03204 0.19727 3 - -
38777 1.38629 1.38629 1.38629 1.38629
38778 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38779 4 2.86982 3.47591 0.13017 3.36931 4 - -
38780 1.38629 1.38629 1.38629 1.38629
38781 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38782 5 2.86982 3.47591 0.13017 3.36931 5 - -
38783 1.38629 1.38629 1.38629 1.38629
38784 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38785 6 0.15719 3.27118 2.73043 3.16274 6 - -
38786 1.38629 1.38629 1.38629 1.38629
38787 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38788 7 3.30705 0.14631 3.36166 2.73626 7 - -
38789 1.38629 1.38629 1.38629 1.38629
38790 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38791 8 3.30705 0.14631 3.36166 2.73626 8 - -
38792 1.38629 1.38629 1.38629 1.38629
38793 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38794 9 2.97980 2.52563 3.03204 0.19727 9 - -
38795 1.38629 1.38629 1.38629 1.38629
38796 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38797 10 3.30705 0.14631 3.36166 2.73626 10 - -
38798 1.38629 1.38629 1.38629 1.38629
38799 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38800 11 0.15719 3.27118 2.73043 3.16274 11 - -
38801 1.38629 1.38629 1.38629 1.38629
38802 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38803 12 2.86982 3.47591 0.13017 3.36931 12 - -
38804 1.38629 1.38629 1.38629 1.38629
38805 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38806 13 0.15719 3.27118 2.73043 3.16274 13 - -
38807 1.38629 1.38629 1.38629 1.38629
38808 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38809 14 2.97980 2.52563 3.03204 0.19727 14 - -
38810 1.38629 1.38629 1.38629 1.38629
38811 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38812 15 3.30705 0.14631 3.36166 2.73626 15 - -
38813 1.38629 1.38629 1.38629 1.38629
38814 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38815 16 0.15719 3.27118 2.73043 3.16274 16 - -
38816 1.38629 1.38629 1.38629 1.38629
38817 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38818 17 2.86982 3.47591 0.13017 3.36931 17 - -
38819 1.38629 1.38629 1.38629 1.38629
38820 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38821 18 2.86982 3.47591 0.13017 3.36931 18 - -
38822 1.38629 1.38629 1.38629 1.38629
38823 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38824 19 3.30705 0.14631 3.36166 2.73626 19 - -
38825 1.38629 1.38629 1.38629 1.38629
38826 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38827 20 2.86982 3.47591 0.13017 3.36931 20 - -
38828 1.38629 1.38629 1.38629 1.38629
38829 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38830 21 0.15719 3.27118 2.73043 3.16274 21 - -
38831 1.38629 1.38629 1.38629 1.38629
38832 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38833 22 2.86982 3.47591 0.13017 3.36931 22 - -
38834 1.38629 1.38629 1.38629 1.38629
38835 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38836 23 0.15719 3.27118 2.73043 3.16274 23 - -
38837 1.38629 1.38629 1.38629 1.38629
38838 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38839 24 2.97980 2.52563 3.03204 0.19727 24 - -
38840 1.38629 1.38629 1.38629 1.38629
38841 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38842 25 2.97980 2.52563 3.03204 0.19727 25 - -
38843 1.38629 1.38629 1.38629 1.38629
38844 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38845 26 0.15719 3.27118 2.73043 3.16274 26 - -
38846 1.38629 1.38629 1.38629 1.38629
38847 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38848 27 3.30705 0.14631 3.36166 2.73626 27 - -
38849 1.38629 1.38629 1.38629 1.38629
38850 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38851 28 3.30705 0.14631 3.36166 2.73626 28 - -
38852 1.38629 1.38629 1.38629 1.38629
38853 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38854 29 3.30705 0.14631 3.36166 2.73626 29 - -
38855 1.38629 1.38629 1.38629 1.38629
38856 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38857 30 2.86982 3.47591 0.13017 3.36931 30 - -
38858 1.38629 1.38629 1.38629 1.38629
38859 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38860 31 3.30705 0.14631 3.36166 2.73626 31 - -
38861 1.38629 1.38629 1.38629 1.38629
38862 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38863 32 2.97980 2.52563 3.03204 0.19727 32 - -
38864 1.38629 1.38629 1.38629 1.38629
38865 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38866 33 2.86982 3.47591 0.13017 3.36931 33 - -
38867 1.38629 1.38629 1.38629 1.38629
38868 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38869 34 0.15719 3.27118 2.73043 3.16274 34 - -
38870 1.38629 1.38629 1.38629 1.38629
38871 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38872 35 0.15719 3.27118 2.73043 3.16274 35 - -
38873 1.38629 1.38629 1.38629 1.38629
38874 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38875 36 2.97980 2.52563 3.03204 0.19727 36 - -
38876 1.38629 1.38629 1.38629 1.38629
38877 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38878 37 2.97980 2.52563 3.03204 0.19727 37 - -
38879 1.38629 1.38629 1.38629 1.38629
38880 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38881 38 2.97980 2.52563 3.03204 0.19727 38 - -
38882 1.38629 1.38629 1.38629 1.38629
38883 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38884 39 0.15719 3.27118 2.73043 3.16274 39 - -
38885 1.38629 1.38629 1.38629 1.38629
38886 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38887 40 0.15719 3.27118 2.73043 3.16274 40 - -
38888 1.38629 1.38629 1.38629 1.38629
38889 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38890 41 2.86982 3.47591 0.13017 3.36931 41 - -
38891 1.38629 1.38629 1.38629 1.38629
38892 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38893 42 3.30705 0.14631 3.36166 2.73626 42 - -
38894 1.38629 1.38629 1.38629 1.38629
38895 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38896 43 0.15719 3.27118 2.73043 3.16274 43 - -
38897 1.38629 1.38629 1.38629 1.38629
38898 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38899 44 2.97980 2.52563 3.03204 0.19727 44 - -
38900 1.38629 1.38629 1.38629 1.38629
38901 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38902 45 0.15719 3.27118 2.73043 3.16274 45 - -
38903 1.38629 1.38629 1.38629 1.38629
38904 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
38905 //
38906 HMMER3/b [3.0 | March 2010]
38907 NAME 4_LSU_Metazoa_4_LSU_start_fiveh_long
38908 LENG 45
38909 ALPH DNA
38910 RF no
38911 CS no
38912 MAP yes
38913 DATE Mon Feb 27 22:52:44 2012
38914 NSEQ 3
38915 EFFN 3.000000
38916 CKSUM 3959841855
38917 STATS LOCAL MSV -7.8534 0.72044
38918 STATS LOCAL VITERBI -7.7389 0.72044
38919 STATS LOCAL FORWARD -4.0256 0.72044
38920 HMM A C G T
38921 m->m m->i m->d i->m i->i d->m d->d
38922 COMPO 1.16687 1.25924 1.51839 1.68347
38923 1.38629 1.38629 1.38629 1.38629
38924 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
38925 1 2.43088 1.34923 2.50068 0.56112 1 - -
38926 1.38629 1.38629 1.38629 1.38629
38927 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38928 2 3.30705 0.14631 3.36166 2.73626 2 - -
38929 1.38629 1.38629 1.38629 1.38629
38930 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38931 3 0.15719 3.27118 2.73043 3.16274 3 - -
38932 1.38629 1.38629 1.38629 1.38629
38933 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38934 4 0.15719 3.27118 2.73043 3.16274 4 - -
38935 1.38629 1.38629 1.38629 1.38629
38936 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38937 5 2.86982 3.47591 0.13017 3.36931 5 - -
38938 1.38629 1.38629 1.38629 1.38629
38939 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38940 6 0.15719 3.27118 2.73043 3.16274 6 - -
38941 1.38629 1.38629 1.38629 1.38629
38942 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38943 7 3.30705 0.14631 3.36166 2.73626 7 - -
38944 1.38629 1.38629 1.38629 1.38629
38945 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38946 8 3.30705 0.14631 3.36166 2.73626 8 - -
38947 1.38629 1.38629 1.38629 1.38629
38948 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38949 9 2.97980 2.52563 3.03204 0.19727 9 - -
38950 1.38629 1.38629 1.38629 1.38629
38951 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38952 10 3.30705 0.14631 3.36166 2.73626 10 - -
38953 1.38629 1.38629 1.38629 1.38629
38954 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38955 11 0.15719 3.27118 2.73043 3.16274 11 - -
38956 1.38629 1.38629 1.38629 1.38629
38957 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38958 12 2.86982 3.47591 0.13017 3.36931 12 - -
38959 1.38629 1.38629 1.38629 1.38629
38960 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38961 13 0.15719 3.27118 2.73043 3.16274 13 - -
38962 1.38629 1.38629 1.38629 1.38629
38963 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38964 14 2.97980 2.52563 3.03204 0.19727 14 - -
38965 1.38629 1.38629 1.38629 1.38629
38966 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38967 15 3.30705 0.14631 3.36166 2.73626 15 - -
38968 1.38629 1.38629 1.38629 1.38629
38969 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38970 16 0.15719 3.27118 2.73043 3.16274 16 - -
38971 1.38629 1.38629 1.38629 1.38629
38972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38973 17 2.86982 3.47591 0.13017 3.36931 17 - -
38974 1.38629 1.38629 1.38629 1.38629
38975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38976 18 2.86982 3.47591 0.13017 3.36931 18 - -
38977 1.38629 1.38629 1.38629 1.38629
38978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38979 19 3.30705 0.14631 3.36166 2.73626 19 - -
38980 1.38629 1.38629 1.38629 1.38629
38981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38982 20 2.86982 3.47591 0.13017 3.36931 20 - -
38983 1.38629 1.38629 1.38629 1.38629
38984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38985 21 0.15719 3.27118 2.73043 3.16274 21 - -
38986 1.38629 1.38629 1.38629 1.38629
38987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38988 22 2.86982 3.47591 0.13017 3.36931 22 - -
38989 1.38629 1.38629 1.38629 1.38629
38990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38991 23 0.15719 3.27118 2.73043 3.16274 23 - -
38992 1.38629 1.38629 1.38629 1.38629
38993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38994 24 3.30705 0.14631 3.36166 2.73626 24 - -
38995 1.38629 1.38629 1.38629 1.38629
38996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
38997 25 2.97980 2.52563 3.03204 0.19727 25 - -
38998 1.38629 1.38629 1.38629 1.38629
38999 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39000 26 0.15719 3.27118 2.73043 3.16274 26 - -
39001 1.38629 1.38629 1.38629 1.38629
39002 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39003 27 3.30705 0.14631 3.36166 2.73626 27 - -
39004 1.38629 1.38629 1.38629 1.38629
39005 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39006 28 3.30705 0.14631 3.36166 2.73626 28 - -
39007 1.38629 1.38629 1.38629 1.38629
39008 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39009 29 3.30705 0.14631 3.36166 2.73626 29 - -
39010 1.38629 1.38629 1.38629 1.38629
39011 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39012 30 2.86982 3.47591 0.13017 3.36931 30 - -
39013 1.38629 1.38629 1.38629 1.38629
39014 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39015 31 3.30705 0.14631 3.36166 2.73626 31 - -
39016 1.38629 1.38629 1.38629 1.38629
39017 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39018 32 2.97980 2.52563 3.03204 0.19727 32 - -
39019 1.38629 1.38629 1.38629 1.38629
39020 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39021 33 2.86982 3.47591 0.13017 3.36931 33 - -
39022 1.38629 1.38629 1.38629 1.38629
39023 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39024 34 0.15719 3.27118 2.73043 3.16274 34 - -
39025 1.38629 1.38629 1.38629 1.38629
39026 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39027 35 0.15719 3.27118 2.73043 3.16274 35 - -
39028 1.38629 1.38629 1.38629 1.38629
39029 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39030 36 3.30705 0.14631 3.36166 2.73626 36 - -
39031 1.38629 1.38629 1.38629 1.38629
39032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39033 37 2.97980 2.52563 3.03204 0.19727 37 - -
39034 1.38629 1.38629 1.38629 1.38629
39035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39036 38 2.97980 2.52563 3.03204 0.19727 38 - -
39037 1.38629 1.38629 1.38629 1.38629
39038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39039 39 0.15719 3.27118 2.73043 3.16274 39 - -
39040 1.38629 1.38629 1.38629 1.38629
39041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39042 40 0.15719 3.27118 2.73043 3.16274 40 - -
39043 1.38629 1.38629 1.38629 1.38629
39044 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39045 41 2.86982 3.47591 0.13017 3.36931 41 - -
39046 1.38629 1.38629 1.38629 1.38629
39047 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39048 42 3.30705 0.14631 3.36166 2.73626 42 - -
39049 1.38629 1.38629 1.38629 1.38629
39050 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39051 43 0.15719 3.27118 2.73043 3.16274 43 - -
39052 1.38629 1.38629 1.38629 1.38629
39053 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39054 44 2.97980 2.52563 3.03204 0.19727 44 - -
39055 1.38629 1.38629 1.38629 1.38629
39056 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
39057 45 0.15719 3.27118 2.73043 3.16274 45 - -
39058 1.38629 1.38629 1.38629 1.38629
39059 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
39060 //
39061 HMMER3/b [3.0 | March 2010]
39062 NAME 4_LSU_Metazoa_4_LSU_start_fivei_long
39063 LENG 45
39064 ALPH DNA
39065 RF no
39066 CS no
39067 MAP yes
39068 DATE Mon Feb 27 22:52:50 2012
39069 NSEQ 4
39070 EFFN 3.292969
39071 CKSUM 2067499997
39072 STATS LOCAL MSV -8.3581 0.71933
39073 STATS LOCAL VITERBI -7.5385 0.71933
39074 STATS LOCAL FORWARD -4.2980 0.71933
39075 HMM A C G T
39076 m->m m->i m->d i->m i->i d->m d->d
39077 COMPO 1.39697 1.26146 1.40117 1.50011
39078 1.38629 1.38629 1.38629 1.38629
39079 0.03709 4.00605 4.00605 1.46634 0.26236 0.00000 *
39080 1 3.07897 2.58901 3.12749 0.18024 1 - -
39081 1.38629 1.38629 1.38629 1.38629
39082 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39083 2 3.42209 0.13153 3.47201 2.82097 2 - -
39084 1.38629 1.38629 1.38629 1.38629
39085 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39086 3 3.07897 2.58901 3.12749 0.18024 3 - -
39087 1.38629 1.38629 1.38629 1.38629
39088 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39089 4 1.65496 2.81433 0.38529 2.67796 4 - -
39090 1.38629 1.38629 1.38629 1.38629
39091 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39092 5 2.94085 3.57805 0.11823 3.48171 5 - -
39093 1.38629 1.38629 1.38629 1.38629
39094 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39095 6 0.14316 3.37070 2.79571 3.27146 6 - -
39096 1.38629 1.38629 1.38629 1.38629
39097 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39098 7 3.42209 0.13153 3.47201 2.82097 7 - -
39099 1.38629 1.38629 1.38629 1.38629
39100 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39101 8 3.42209 0.13153 3.47201 2.82097 8 - -
39102 1.38629 1.38629 1.38629 1.38629
39103 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39104 9 3.07897 2.58901 3.12749 0.18024 9 - -
39105 1.38629 1.38629 1.38629 1.38629
39106 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39107 10 3.42209 0.13153 3.47201 2.82097 10 - -
39108 1.38629 1.38629 1.38629 1.38629
39109 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39110 11 2.94085 3.57805 0.11823 3.48171 11 - -
39111 1.38629 1.38629 1.38629 1.38629
39112 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39113 12 2.94085 3.57805 0.11823 3.48171 12 - -
39114 1.38629 1.38629 1.38629 1.38629
39115 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39116 13 0.14316 3.37070 2.79571 3.27146 13 - -
39117 1.38629 1.38629 1.38629 1.38629
39118 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39119 14 3.07897 2.58901 3.12749 0.18024 14 - -
39120 1.38629 1.38629 1.38629 1.38629
39121 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39122 15 3.42209 0.13153 3.47201 2.82097 15 - -
39123 1.38629 1.38629 1.38629 1.38629
39124 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39125 16 0.14316 3.37070 2.79571 3.27146 16 - -
39126 1.38629 1.38629 1.38629 1.38629
39127 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39128 17 2.94085 3.57805 0.11823 3.48171 17 - -
39129 1.38629 1.38629 1.38629 1.38629
39130 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39131 18 2.94085 3.57805 0.11823 3.48171 18 - -
39132 1.38629 1.38629 1.38629 1.38629
39133 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39134 19 3.42209 0.13153 3.47201 2.82097 19 - -
39135 1.38629 1.38629 1.38629 1.38629
39136 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39137 20 3.42209 0.13153 3.47201 2.82097 20 - -
39138 1.38629 1.38629 1.38629 1.38629
39139 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39140 21 0.14316 3.37070 2.79571 3.27146 21 - -
39141 1.38629 1.38629 1.38629 1.38629
39142 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39143 22 2.94085 3.57805 0.11823 3.48171 22 - -
39144 1.38629 1.38629 1.38629 1.38629
39145 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39146 23 2.94085 3.57805 0.11823 3.48171 23 - -
39147 1.38629 1.38629 1.38629 1.38629
39148 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39149 24 3.42209 0.13153 3.47201 2.82097 24 - -
39150 1.38629 1.38629 1.38629 1.38629
39151 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39152 25 3.07897 2.58901 3.12749 0.18024 25 - -
39153 1.38629 1.38629 1.38629 1.38629
39154 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39155 26 0.14316 3.37070 2.79571 3.27146 26 - -
39156 1.38629 1.38629 1.38629 1.38629
39157 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39158 27 3.42209 0.13153 3.47201 2.82097 27 - -
39159 1.38629 1.38629 1.38629 1.38629
39160 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39161 28 3.42209 0.13153 3.47201 2.82097 28 - -
39162 1.38629 1.38629 1.38629 1.38629
39163 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39164 29 3.42209 0.13153 3.47201 2.82097 29 - -
39165 1.38629 1.38629 1.38629 1.38629
39166 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39167 30 2.94085 3.57805 0.11823 3.48171 30 - -
39168 1.38629 1.38629 1.38629 1.38629
39169 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39170 31 3.42209 0.13153 3.47201 2.82097 31 - -
39171 1.38629 1.38629 1.38629 1.38629
39172 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39173 32 3.07897 2.58901 3.12749 0.18024 32 - -
39174 1.38629 1.38629 1.38629 1.38629
39175 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39176 33 2.94085 3.57805 0.11823 3.48171 33 - -
39177 1.38629 1.38629 1.38629 1.38629
39178 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39179 34 0.14316 3.37070 2.79571 3.27146 34 - -
39180 1.38629 1.38629 1.38629 1.38629
39181 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39182 35 0.14316 3.37070 2.79571 3.27146 35 - -
39183 1.38629 1.38629 1.38629 1.38629
39184 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39185 36 3.07897 2.58901 3.12749 0.18024 36 - -
39186 1.38629 1.38629 1.38629 1.38629
39187 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39188 37 3.07897 2.58901 3.12749 0.18024 37 - -
39189 1.38629 1.38629 1.38629 1.38629
39190 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39191 38 3.07897 2.58901 3.12749 0.18024 38 - -
39192 1.38629 1.38629 1.38629 1.38629
39193 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39194 39 0.14316 3.37070 2.79571 3.27146 39 - -
39195 1.38629 1.38629 1.38629 1.38629
39196 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39197 40 0.14316 3.37070 2.79571 3.27146 40 - -
39198 1.38629 1.38629 1.38629 1.38629
39199 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39200 41 2.94085 3.57805 0.11823 3.48171 41 - -
39201 1.38629 1.38629 1.38629 1.38629
39202 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39203 42 3.42209 0.13153 3.47201 2.82097 42 - -
39204 1.38629 1.38629 1.38629 1.38629
39205 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39206 43 0.14316 3.37070 2.79571 3.27146 43 - -
39207 1.38629 1.38629 1.38629 1.38629
39208 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39209 44 3.07897 2.58901 3.12749 0.18024 44 - -
39210 1.38629 1.38629 1.38629 1.38629
39211 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547
39212 45 0.14316 3.37070 2.79571 3.27146 45 - -
39213 1.38629 1.38629 1.38629 1.38629
39214 0.01872 3.98768 * 1.46634 0.26236 0.00000 *
39215 //
39216 HMMER3/b [3.0 | March 2010]
39217 NAME 4_LSU_Metazoa_4_LSU_start_fivej_long
39218 LENG 45
39219 ALPH DNA
39220 RF no
39221 CS no
39222 MAP yes
39223 DATE Mon Feb 27 22:52:57 2012
39224 NSEQ 14
39225 EFFN 3.216309
39226 CKSUM 1938204490
39227 STATS LOCAL MSV -8.1797 0.71931
39228 STATS LOCAL VITERBI -7.6430 0.71931
39229 STATS LOCAL FORWARD -3.9981 0.71931
39230 HMM A C G T
39231 m->m m->i m->d i->m i->i d->m d->d
39232 COMPO 1.41013 1.20320 1.45583 1.50305
39233 1.38629 1.38629 1.38629 1.38629
39234 0.03762 3.99200 3.99200 1.46634 0.26236 0.00000 *
39235 1 3.39312 0.13508 3.44425 2.79979 1 - -
39236 1.38629 1.38629 1.38629 1.38629
39237 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39238 2 3.39312 0.13508 3.44425 2.79979 2 - -
39239 1.38629 1.38629 1.38629 1.38629
39240 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39241 3 3.05375 2.57294 3.10323 0.18440 3 - -
39242 1.38629 1.38629 1.38629 1.38629
39243 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39244 4 2.92319 3.55246 0.12110 3.45350 4 - -
39245 1.38629 1.38629 1.38629 1.38629
39246 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39247 5 2.92319 3.55246 0.12110 3.45350 5 - -
39248 1.38629 1.38629 1.38629 1.38629
39249 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39250 6 0.14656 3.34560 2.77935 3.24400 6 - -
39251 1.38629 1.38629 1.38629 1.38629
39252 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39253 7 3.39312 0.13508 3.44425 2.79979 7 - -
39254 1.38629 1.38629 1.38629 1.38629
39255 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39256 8 3.39312 0.13508 3.44425 2.79979 8 - -
39257 1.38629 1.38629 1.38629 1.38629
39258 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39259 9 3.05375 2.57294 3.10323 0.18440 9 - -
39260 1.38629 1.38629 1.38629 1.38629
39261 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39262 10 3.39312 0.13508 3.44425 2.79979 10 - -
39263 1.38629 1.38629 1.38629 1.38629
39264 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39265 11 0.14656 3.34560 2.77935 3.24400 11 - -
39266 1.38629 1.38629 1.38629 1.38629
39267 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39268 12 2.92319 3.55246 0.12110 3.45350 12 - -
39269 1.38629 1.38629 1.38629 1.38629
39270 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39271 13 3.39312 0.13508 3.44425 2.79979 13 - -
39272 1.38629 1.38629 1.38629 1.38629
39273 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39274 14 3.05375 2.57294 3.10323 0.18440 14 - -
39275 1.38629 1.38629 1.38629 1.38629
39276 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39277 15 3.39312 0.13508 3.44425 2.79979 15 - -
39278 1.38629 1.38629 1.38629 1.38629
39279 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39280 16 0.14656 3.34560 2.77935 3.24400 16 - -
39281 1.38629 1.38629 1.38629 1.38629
39282 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39283 17 2.92319 3.55246 0.12110 3.45350 17 - -
39284 1.38629 1.38629 1.38629 1.38629
39285 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39286 18 2.92319 3.55246 0.12110 3.45350 18 - -
39287 1.38629 1.38629 1.38629 1.38629
39288 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39289 19 3.39312 0.13508 3.44425 2.79979 19 - -
39290 1.38629 1.38629 1.38629 1.38629
39291 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39292 20 2.92319 3.55246 0.12110 3.45350 20 - -
39293 1.38629 1.38629 1.38629 1.38629
39294 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39295 21 3.05375 2.57294 3.10323 0.18440 21 - -
39296 1.38629 1.38629 1.38629 1.38629
39297 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39298 22 2.92319 3.55246 0.12110 3.45350 22 - -
39299 1.38629 1.38629 1.38629 1.38629
39300 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39301 23 0.14656 3.34560 2.77935 3.24400 23 - -
39302 1.38629 1.38629 1.38629 1.38629
39303 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39304 24 3.39312 0.13508 3.44425 2.79979 24 - -
39305 1.38629 1.38629 1.38629 1.38629
39306 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39307 25 3.05375 2.57294 3.10323 0.18440 25 - -
39308 1.38629 1.38629 1.38629 1.38629
39309 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39310 26 0.14656 3.34560 2.77935 3.24400 26 - -
39311 1.38629 1.38629 1.38629 1.38629
39312 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39313 27 3.39312 0.13508 3.44425 2.79979 27 - -
39314 1.38629 1.38629 1.38629 1.38629
39315 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39316 28 3.39312 0.13508 3.44425 2.79979 28 - -
39317 1.38629 1.38629 1.38629 1.38629
39318 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39319 29 3.39312 0.13508 3.44425 2.79979 29 - -
39320 1.38629 1.38629 1.38629 1.38629
39321 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39322 30 2.92319 3.55246 0.12110 3.45350 30 - -
39323 1.38629 1.38629 1.38629 1.38629
39324 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39325 31 3.39312 0.13508 3.44425 2.79979 31 - -
39326 1.38629 1.38629 1.38629 1.38629
39327 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39328 32 3.05375 2.57294 3.10323 0.18440 32 - -
39329 1.38629 1.38629 1.38629 1.38629
39330 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39331 33 2.92319 3.55246 0.12110 3.45350 33 - -
39332 1.38629 1.38629 1.38629 1.38629
39333 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39334 34 0.14656 3.34560 2.77935 3.24400 34 - -
39335 1.38629 1.38629 1.38629 1.38629
39336 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39337 35 0.14656 3.34560 2.77935 3.24400 35 - -
39338 1.38629 1.38629 1.38629 1.38629
39339 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39340 36 3.05375 2.57294 3.10323 0.18440 36 - -
39341 1.38629 1.38629 1.38629 1.38629
39342 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39343 37 3.05375 2.57294 3.10323 0.18440 37 - -
39344 1.38629 1.38629 1.38629 1.38629
39345 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39346 38 3.05375 2.57294 3.10323 0.18440 38 - -
39347 1.38629 1.38629 1.38629 1.38629
39348 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39349 39 0.14656 3.34560 2.77935 3.24400 39 - -
39350 1.38629 1.38629 1.38629 1.38629
39351 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39352 40 0.14656 3.34560 2.77935 3.24400 40 - -
39353 1.38629 1.38629 1.38629 1.38629
39354 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39355 41 2.92319 3.55246 0.12110 3.45350 41 - -
39356 1.38629 1.38629 1.38629 1.38629
39357 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39358 42 3.39312 0.13508 3.44425 2.79979 42 - -
39359 1.38629 1.38629 1.38629 1.38629
39360 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39361 43 0.14656 3.34560 2.77935 3.24400 43 - -
39362 1.38629 1.38629 1.38629 1.38629
39363 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39364 44 3.05375 2.57294 3.10323 0.18440 44 - -
39365 1.38629 1.38629 1.38629 1.38629
39366 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
39367 45 0.14656 3.34560 2.77935 3.24400 45 - -
39368 1.38629 1.38629 1.38629 1.38629
39369 0.01899 3.97336 * 1.46634 0.26236 0.00000 *
39370 //
39371 HMMER3/b [3.0 | March 2010]
39372 NAME 4_LSU_Metazoa_4_LSU_start_fivek_long
39373 LENG 45
39374 ALPH DNA
39375 RF no
39376 CS no
39377 MAP yes
39378 DATE Mon Feb 27 22:53:04 2012
39379 NSEQ 2
39380 EFFN 2.000000
39381 CKSUM 538974717
39382 STATS LOCAL MSV -7.4755 0.72790
39383 STATS LOCAL VITERBI -8.1493 0.72790
39384 STATS LOCAL FORWARD -3.5738 0.72790
39385 HMM A C G T
39386 m->m m->i m->d i->m i->i d->m d->d
39387 COMPO 1.24234 1.29073 1.49936 1.54671
39388 1.38629 1.38629 1.38629 1.38629
39389 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
39390 1 2.81865 0.23582 2.88868 2.35662 1 - -
39391 1.38629 1.38629 1.38629 1.38629
39392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39393 2 2.81865 0.23582 2.88868 2.35662 2 - -
39394 1.38629 1.38629 1.38629 1.38629
39395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39396 3 2.57915 2.25909 2.64442 0.28946 3 - -
39397 1.38629 1.38629 1.38629 1.38629
39398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39399 4 2.81865 0.23582 2.88868 2.35662 4 - -
39400 1.38629 1.38629 1.38629 1.38629
39401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39402 5 2.53331 3.02441 0.20344 2.88069 5 - -
39403 1.38629 1.38629 1.38629 1.38629
39404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39405 6 0.23862 2.84929 2.43386 2.70756 6 - -
39406 1.38629 1.38629 1.38629 1.38629
39407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39408 7 2.81865 0.23582 2.88868 2.35662 7 - -
39409 1.38629 1.38629 1.38629 1.38629
39410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39411 8 2.81865 0.23582 2.88868 2.35662 8 - -
39412 1.38629 1.38629 1.38629 1.38629
39413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39414 9 2.57915 2.25909 2.64442 0.28946 9 - -
39415 1.38629 1.38629 1.38629 1.38629
39416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39417 10 2.53331 3.02441 0.20344 2.88069 10 - -
39418 1.38629 1.38629 1.38629 1.38629
39419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39420 11 0.23862 2.84929 2.43386 2.70756 11 - -
39421 1.38629 1.38629 1.38629 1.38629
39422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39423 12 2.53331 3.02441 0.20344 2.88069 12 - -
39424 1.38629 1.38629 1.38629 1.38629
39425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39426 13 0.23862 2.84929 2.43386 2.70756 13 - -
39427 1.38629 1.38629 1.38629 1.38629
39428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39429 14 2.57915 2.25909 2.64442 0.28946 14 - -
39430 1.38629 1.38629 1.38629 1.38629
39431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39432 15 2.81865 0.23582 2.88868 2.35662 15 - -
39433 1.38629 1.38629 1.38629 1.38629
39434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39435 16 0.23862 2.84929 2.43386 2.70756 16 - -
39436 1.38629 1.38629 1.38629 1.38629
39437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39438 17 2.53331 3.02441 0.20344 2.88069 17 - -
39439 1.38629 1.38629 1.38629 1.38629
39440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39441 18 0.23862 2.84929 2.43386 2.70756 18 - -
39442 1.38629 1.38629 1.38629 1.38629
39443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39444 19 2.81865 0.23582 2.88868 2.35662 19 - -
39445 1.38629 1.38629 1.38629 1.38629
39446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39447 20 2.53331 3.02441 0.20344 2.88069 20 - -
39448 1.38629 1.38629 1.38629 1.38629
39449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39450 21 0.23862 2.84929 2.43386 2.70756 21 - -
39451 1.38629 1.38629 1.38629 1.38629
39452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39453 22 2.53331 3.02441 0.20344 2.88069 22 - -
39454 1.38629 1.38629 1.38629 1.38629
39455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39456 23 0.23862 2.84929 2.43386 2.70756 23 - -
39457 1.38629 1.38629 1.38629 1.38629
39458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39459 24 2.57915 2.25909 2.64442 0.28946 24 - -
39460 1.38629 1.38629 1.38629 1.38629
39461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39462 25 2.57915 2.25909 2.64442 0.28946 25 - -
39463 1.38629 1.38629 1.38629 1.38629
39464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39465 26 0.23862 2.84929 2.43386 2.70756 26 - -
39466 1.38629 1.38629 1.38629 1.38629
39467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39468 27 2.81865 0.23582 2.88868 2.35662 27 - -
39469 1.38629 1.38629 1.38629 1.38629
39470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39471 28 2.81865 0.23582 2.88868 2.35662 28 - -
39472 1.38629 1.38629 1.38629 1.38629
39473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39474 29 2.81865 0.23582 2.88868 2.35662 29 - -
39475 1.38629 1.38629 1.38629 1.38629
39476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39477 30 2.53331 3.02441 0.20344 2.88069 30 - -
39478 1.38629 1.38629 1.38629 1.38629
39479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39480 31 2.81865 0.23582 2.88868 2.35662 31 - -
39481 1.38629 1.38629 1.38629 1.38629
39482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39483 32 2.57915 2.25909 2.64442 0.28946 32 - -
39484 1.38629 1.38629 1.38629 1.38629
39485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39486 33 2.53331 3.02441 0.20344 2.88069 33 - -
39487 1.38629 1.38629 1.38629 1.38629
39488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39489 34 0.23862 2.84929 2.43386 2.70756 34 - -
39490 1.38629 1.38629 1.38629 1.38629
39491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39492 35 0.23862 2.84929 2.43386 2.70756 35 - -
39493 1.38629 1.38629 1.38629 1.38629
39494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39495 36 2.81865 0.23582 2.88868 2.35662 36 - -
39496 1.38629 1.38629 1.38629 1.38629
39497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39498 37 2.57915 2.25909 2.64442 0.28946 37 - -
39499 1.38629 1.38629 1.38629 1.38629
39500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39501 38 2.57915 2.25909 2.64442 0.28946 38 - -
39502 1.38629 1.38629 1.38629 1.38629
39503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39504 39 0.23862 2.84929 2.43386 2.70756 39 - -
39505 1.38629 1.38629 1.38629 1.38629
39506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39507 40 0.23862 2.84929 2.43386 2.70756 40 - -
39508 1.38629 1.38629 1.38629 1.38629
39509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39510 41 2.53331 3.02441 0.20344 2.88069 41 - -
39511 1.38629 1.38629 1.38629 1.38629
39512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39513 42 2.81865 0.23582 2.88868 2.35662 42 - -
39514 1.38629 1.38629 1.38629 1.38629
39515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39516 43 0.23862 2.84929 2.43386 2.70756 43 - -
39517 1.38629 1.38629 1.38629 1.38629
39518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39519 44 2.57915 2.25909 2.64442 0.28946 44 - -
39520 1.38629 1.38629 1.38629 1.38629
39521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
39522 45 0.23862 2.84929 2.43386 2.70756 45 - -
39523 1.38629 1.38629 1.38629 1.38629
39524 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
39525 //
39526 HMMER3/b [3.0 | March 2010]
39527 NAME 4_LSU_Metazoa_4_LSU_start_fivel_long
39528 LENG 45
39529 ALPH DNA
39530 RF no
39531 CS no
39532 MAP yes
39533 DATE Mon Feb 27 22:53:11 2012
39534 NSEQ 4
39535 EFFN 3.246094
39536 CKSUM 3448565070
39537 STATS LOCAL MSV -8.1840 0.71933
39538 STATS LOCAL VITERBI -7.6695 0.71933
39539 STATS LOCAL FORWARD -4.1138 0.71933
39540 HMM A C G T
39541 m->m m->i m->d i->m i->i d->m d->d
39542 COMPO 1.27844 1.38903 1.45039 1.43662
39543 1.38629 1.38629 1.38629 1.38629
39544 0.03741 3.99748 3.99748 1.46634 0.26236 0.00000 *
39545 1 3.40447 0.13368 3.45513 2.80810 1 - -
39546 1.38629 1.38629 1.38629 1.38629
39547 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39548 2 3.06361 2.57923 3.11272 0.18276 2 - -
39549 1.38629 1.38629 1.38629 1.38629
39550 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39551 3 3.06361 2.57923 3.11272 0.18276 3 - -
39552 1.38629 1.38629 1.38629 1.38629
39553 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39554 4 3.40447 0.13368 3.45513 2.80810 4 - -
39555 1.38629 1.38629 1.38629 1.38629
39556 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39557 5 2.93012 3.56249 0.11996 3.46456 5 - -
39558 1.38629 1.38629 1.38629 1.38629
39559 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39560 6 0.14522 3.35543 2.78576 3.25475 6 - -
39561 1.38629 1.38629 1.38629 1.38629
39562 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39563 7 3.40447 0.13368 3.45513 2.80810 7 - -
39564 1.38629 1.38629 1.38629 1.38629
39565 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39566 8 3.40447 0.13368 3.45513 2.80810 8 - -
39567 1.38629 1.38629 1.38629 1.38629
39568 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39569 9 3.06361 2.57923 3.11272 0.18276 9 - -
39570 1.38629 1.38629 1.38629 1.38629
39571 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39572 10 2.93012 3.56249 0.11996 3.46456 10 - -
39573 1.38629 1.38629 1.38629 1.38629
39574 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39575 11 0.14522 3.35543 2.78576 3.25475 11 - -
39576 1.38629 1.38629 1.38629 1.38629
39577 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39578 12 2.93012 3.56249 0.11996 3.46456 12 - -
39579 1.38629 1.38629 1.38629 1.38629
39580 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39581 13 0.14522 3.35543 2.78576 3.25475 13 - -
39582 1.38629 1.38629 1.38629 1.38629
39583 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39584 14 3.06361 2.57923 3.11272 0.18276 14 - -
39585 1.38629 1.38629 1.38629 1.38629
39586 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39587 15 3.40447 0.13368 3.45513 2.80810 15 - -
39588 1.38629 1.38629 1.38629 1.38629
39589 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39590 16 2.93012 3.56249 0.11996 3.46456 16 - -
39591 1.38629 1.38629 1.38629 1.38629
39592 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39593 17 2.93012 3.56249 0.11996 3.46456 17 - -
39594 1.38629 1.38629 1.38629 1.38629
39595 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39596 18 0.14522 3.35543 2.78576 3.25475 18 - -
39597 1.38629 1.38629 1.38629 1.38629
39598 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39599 19 3.40447 0.13368 3.45513 2.80810 19 - -
39600 1.38629 1.38629 1.38629 1.38629
39601 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39602 20 2.93012 3.56249 0.11996 3.46456 20 - -
39603 1.38629 1.38629 1.38629 1.38629
39604 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39605 21 0.14522 3.35543 2.78576 3.25475 21 - -
39606 1.38629 1.38629 1.38629 1.38629
39607 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39608 22 2.93012 3.56249 0.11996 3.46456 22 - -
39609 1.38629 1.38629 1.38629 1.38629
39610 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39611 23 0.14522 3.35543 2.78576 3.25475 23 - -
39612 1.38629 1.38629 1.38629 1.38629
39613 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39614 24 3.06361 2.57923 3.11272 0.18276 24 - -
39615 1.38629 1.38629 1.38629 1.38629
39616 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39617 25 3.06361 2.57923 3.11272 0.18276 25 - -
39618 1.38629 1.38629 1.38629 1.38629
39619 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39620 26 0.14522 3.35543 2.78576 3.25475 26 - -
39621 1.38629 1.38629 1.38629 1.38629
39622 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39623 27 3.40447 0.13368 3.45513 2.80810 27 - -
39624 1.38629 1.38629 1.38629 1.38629
39625 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39626 28 3.40447 0.13368 3.45513 2.80810 28 - -
39627 1.38629 1.38629 1.38629 1.38629
39628 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39629 29 3.40447 0.13368 3.45513 2.80810 29 - -
39630 1.38629 1.38629 1.38629 1.38629
39631 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39632 30 2.93012 3.56249 0.11996 3.46456 30 - -
39633 1.38629 1.38629 1.38629 1.38629
39634 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39635 31 3.40447 0.13368 3.45513 2.80810 31 - -
39636 1.38629 1.38629 1.38629 1.38629
39637 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39638 32 3.06361 2.57923 3.11272 0.18276 32 - -
39639 1.38629 1.38629 1.38629 1.38629
39640 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39641 33 2.93012 3.56249 0.11996 3.46456 33 - -
39642 1.38629 1.38629 1.38629 1.38629
39643 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39644 34 0.14522 3.35543 2.78576 3.25475 34 - -
39645 1.38629 1.38629 1.38629 1.38629
39646 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39647 35 0.14522 3.35543 2.78576 3.25475 35 - -
39648 1.38629 1.38629 1.38629 1.38629
39649 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39650 36 3.06361 2.57923 3.11272 0.18276 36 - -
39651 1.38629 1.38629 1.38629 1.38629
39652 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39653 37 3.06361 2.57923 3.11272 0.18276 37 - -
39654 1.38629 1.38629 1.38629 1.38629
39655 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39656 38 3.06361 2.57923 3.11272 0.18276 38 - -
39657 1.38629 1.38629 1.38629 1.38629
39658 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39659 39 0.14522 3.35543 2.78576 3.25475 39 - -
39660 1.38629 1.38629 1.38629 1.38629
39661 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39662 40 0.14522 3.35543 2.78576 3.25475 40 - -
39663 1.38629 1.38629 1.38629 1.38629
39664 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39665 41 2.93012 3.56249 0.11996 3.46456 41 - -
39666 1.38629 1.38629 1.38629 1.38629
39667 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39668 42 3.40447 0.13368 3.45513 2.80810 42 - -
39669 1.38629 1.38629 1.38629 1.38629
39670 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39671 43 0.14522 3.35543 2.78576 3.25475 43 - -
39672 1.38629 1.38629 1.38629 1.38629
39673 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39674 44 3.06361 2.57923 3.11272 0.18276 44 - -
39675 1.38629 1.38629 1.38629 1.38629
39676 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
39677 45 0.14522 3.35543 2.78576 3.25475 45 - -
39678 1.38629 1.38629 1.38629 1.38629
39679 0.01888 3.97895 * 1.46634 0.26236 0.00000 *
39680 //
39681 HMMER3/b [3.0 | March 2010]
39682 NAME 4_LSU_Metazoa_4_LSU_start_fivem_long
39683 LENG 45
39684 ALPH DNA
39685 RF no
39686 CS no
39687 MAP yes
39688 DATE Mon Feb 27 22:53:17 2012
39689 NSEQ 4
39690 EFFN 3.222656
39691 CKSUM 1184312453
39692 STATS LOCAL MSV -8.1699 0.71932
39693 STATS LOCAL VITERBI -7.7304 0.71932
39694 STATS LOCAL FORWARD -4.0256 0.71932
39695 HMM A C G T
39696 m->m m->i m->d i->m i->i d->m d->d
39697 COMPO 1.22397 1.20490 1.61149 1.57685
39698 1.38629 1.38629 1.38629 1.38629
39699 0.03758 3.99317 3.99317 1.46634 0.26236 0.00000 *
39700 1 3.39555 0.13478 3.44658 2.80157 1 - -
39701 1.38629 1.38629 1.38629 1.38629
39702 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39703 2 3.05586 2.57429 3.10526 0.18405 2 - -
39704 1.38629 1.38629 1.38629 1.38629
39705 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39706 3 3.39555 0.13478 3.44658 2.80157 3 - -
39707 1.38629 1.38629 1.38629 1.38629
39708 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39709 4 3.39555 0.13478 3.44658 2.80157 4 - -
39710 1.38629 1.38629 1.38629 1.38629
39711 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39712 5 2.92468 3.55461 0.12085 3.45586 5 - -
39713 1.38629 1.38629 1.38629 1.38629
39714 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39715 6 0.14627 3.34770 2.78072 3.24630 6 - -
39716 1.38629 1.38629 1.38629 1.38629
39717 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39718 7 3.39555 0.13478 3.44658 2.80157 7 - -
39719 1.38629 1.38629 1.38629 1.38629
39720 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39721 8 3.39555 0.13478 3.44658 2.80157 8 - -
39722 1.38629 1.38629 1.38629 1.38629
39723 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39724 9 3.05586 2.57429 3.10526 0.18405 9 - -
39725 1.38629 1.38629 1.38629 1.38629
39726 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39727 10 3.39555 0.13478 3.44658 2.80157 10 - -
39728 1.38629 1.38629 1.38629 1.38629
39729 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39730 11 0.14627 3.34770 2.78072 3.24630 11 - -
39731 1.38629 1.38629 1.38629 1.38629
39732 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39733 12 2.92468 3.55461 0.12085 3.45586 12 - -
39734 1.38629 1.38629 1.38629 1.38629
39735 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39736 13 0.14627 3.34770 2.78072 3.24630 13 - -
39737 1.38629 1.38629 1.38629 1.38629
39738 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39739 14 3.05586 2.57429 3.10526 0.18405 14 - -
39740 1.38629 1.38629 1.38629 1.38629
39741 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39742 15 3.39555 0.13478 3.44658 2.80157 15 - -
39743 1.38629 1.38629 1.38629 1.38629
39744 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39745 16 0.14627 3.34770 2.78072 3.24630 16 - -
39746 1.38629 1.38629 1.38629 1.38629
39747 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39748 17 2.92468 3.55461 0.12085 3.45586 17 - -
39749 1.38629 1.38629 1.38629 1.38629
39750 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39751 18 0.14627 3.34770 2.78072 3.24630 18 - -
39752 1.38629 1.38629 1.38629 1.38629
39753 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39754 19 3.39555 0.13478 3.44658 2.80157 19 - -
39755 1.38629 1.38629 1.38629 1.38629
39756 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39757 20 2.92468 3.55461 0.12085 3.45586 20 - -
39758 1.38629 1.38629 1.38629 1.38629
39759 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39760 21 0.14627 3.34770 2.78072 3.24630 21 - -
39761 1.38629 1.38629 1.38629 1.38629
39762 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39763 22 2.92468 3.55461 0.12085 3.45586 22 - -
39764 1.38629 1.38629 1.38629 1.38629
39765 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39766 23 0.14627 3.34770 2.78072 3.24630 23 - -
39767 1.38629 1.38629 1.38629 1.38629
39768 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39769 24 3.39555 0.13478 3.44658 2.80157 24 - -
39770 1.38629 1.38629 1.38629 1.38629
39771 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39772 25 3.05586 2.57429 3.10526 0.18405 25 - -
39773 1.38629 1.38629 1.38629 1.38629
39774 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39775 26 0.14627 3.34770 2.78072 3.24630 26 - -
39776 1.38629 1.38629 1.38629 1.38629
39777 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39778 27 3.39555 0.13478 3.44658 2.80157 27 - -
39779 1.38629 1.38629 1.38629 1.38629
39780 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39781 28 3.39555 0.13478 3.44658 2.80157 28 - -
39782 1.38629 1.38629 1.38629 1.38629
39783 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39784 29 3.39555 0.13478 3.44658 2.80157 29 - -
39785 1.38629 1.38629 1.38629 1.38629
39786 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39787 30 2.92468 3.55461 0.12085 3.45586 30 - -
39788 1.38629 1.38629 1.38629 1.38629
39789 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39790 31 3.39555 0.13478 3.44658 2.80157 31 - -
39791 1.38629 1.38629 1.38629 1.38629
39792 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39793 32 3.05586 2.57429 3.10526 0.18405 32 - -
39794 1.38629 1.38629 1.38629 1.38629
39795 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39796 33 2.92468 3.55461 0.12085 3.45586 33 - -
39797 1.38629 1.38629 1.38629 1.38629
39798 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39799 34 0.14627 3.34770 2.78072 3.24630 34 - -
39800 1.38629 1.38629 1.38629 1.38629
39801 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39802 35 0.14627 3.34770 2.78072 3.24630 35 - -
39803 1.38629 1.38629 1.38629 1.38629
39804 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39805 36 3.05586 2.57429 3.10526 0.18405 36 - -
39806 1.38629 1.38629 1.38629 1.38629
39807 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39808 37 3.05586 2.57429 3.10526 0.18405 37 - -
39809 1.38629 1.38629 1.38629 1.38629
39810 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39811 38 3.05586 2.57429 3.10526 0.18405 38 - -
39812 1.38629 1.38629 1.38629 1.38629
39813 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39814 39 0.14627 3.34770 2.78072 3.24630 39 - -
39815 1.38629 1.38629 1.38629 1.38629
39816 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39817 40 0.14627 3.34770 2.78072 3.24630 40 - -
39818 1.38629 1.38629 1.38629 1.38629
39819 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39820 41 2.92468 3.55461 0.12085 3.45586 41 - -
39821 1.38629 1.38629 1.38629 1.38629
39822 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39823 42 3.39555 0.13478 3.44658 2.80157 42 - -
39824 1.38629 1.38629 1.38629 1.38629
39825 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39826 43 0.14627 3.34770 2.78072 3.24630 43 - -
39827 1.38629 1.38629 1.38629 1.38629
39828 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39829 44 3.05586 2.57429 3.10526 0.18405 44 - -
39830 1.38629 1.38629 1.38629 1.38629
39831 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
39832 45 0.14627 3.34770 2.78072 3.24630 45 - -
39833 1.38629 1.38629 1.38629 1.38629
39834 0.01897 3.97456 * 1.46634 0.26236 0.00000 *
39835 //
39836 HMMER3/b [3.0 | March 2010]
39837 NAME 4_LSU_Metazoa_4_LSU_start_fiven_long
39838 LENG 45
39839 ALPH DNA
39840 RF no
39841 CS no
39842 MAP yes
39843 DATE Mon Feb 27 22:53:23 2012
39844 NSEQ 4
39845 EFFN 3.332031
39846 CKSUM 2141380269
39847 STATS LOCAL MSV -8.2750 0.71931
39848 STATS LOCAL VITERBI -7.7801 0.71931
39849 STATS LOCAL FORWARD -4.2110 0.71931
39850 HMM A C G T
39851 m->m m->i m->d i->m i->i d->m d->d
39852 COMPO 1.24934 1.32564 1.42131 1.57854
39853 1.38629 1.38629 1.38629 1.38629
39854 0.03682 4.01314 4.01314 1.46634 0.26236 0.00000 *
39855 1 0.14150 3.38325 2.80387 3.28520 1 - -
39856 1.38629 1.38629 1.38629 1.38629
39857 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39858 2 3.09163 2.59706 3.13967 0.17819 2 - -
39859 1.38629 1.38629 1.38629 1.38629
39860 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39861 3 3.43655 0.12980 3.48587 2.83150 3 - -
39862 1.38629 1.38629 1.38629 1.38629
39863 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39864 4 3.43655 0.12980 3.48587 2.83150 4 - -
39865 1.38629 1.38629 1.38629 1.38629
39866 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39867 5 2.94961 3.59079 0.11683 3.49577 5 - -
39868 1.38629 1.38629 1.38629 1.38629
39869 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39870 6 0.14150 3.38325 2.80387 3.28520 6 - -
39871 1.38629 1.38629 1.38629 1.38629
39872 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39873 7 3.43655 0.12980 3.48587 2.83150 7 - -
39874 1.38629 1.38629 1.38629 1.38629
39875 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39876 8 3.43655 0.12980 3.48587 2.83150 8 - -
39877 1.38629 1.38629 1.38629 1.38629
39878 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39879 9 3.09163 2.59706 3.13967 0.17819 9 - -
39880 1.38629 1.38629 1.38629 1.38629
39881 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39882 10 3.43655 0.12980 3.48587 2.83150 10 - -
39883 1.38629 1.38629 1.38629 1.38629
39884 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39885 11 2.94961 3.59079 0.11683 3.49577 11 - -
39886 1.38629 1.38629 1.38629 1.38629
39887 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39888 12 2.94961 3.59079 0.11683 3.49577 12 - -
39889 1.38629 1.38629 1.38629 1.38629
39890 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39891 13 0.14150 3.38325 2.80387 3.28520 13 - -
39892 1.38629 1.38629 1.38629 1.38629
39893 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39894 14 3.09163 2.59706 3.13967 0.17819 14 - -
39895 1.38629 1.38629 1.38629 1.38629
39896 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39897 15 3.43655 0.12980 3.48587 2.83150 15 - -
39898 1.38629 1.38629 1.38629 1.38629
39899 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39900 16 0.14150 3.38325 2.80387 3.28520 16 - -
39901 1.38629 1.38629 1.38629 1.38629
39902 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39903 17 2.94961 3.59079 0.11683 3.49577 17 - -
39904 1.38629 1.38629 1.38629 1.38629
39905 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39906 18 0.14150 3.38325 2.80387 3.28520 18 - -
39907 1.38629 1.38629 1.38629 1.38629
39908 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39909 19 3.43655 0.12980 3.48587 2.83150 19 - -
39910 1.38629 1.38629 1.38629 1.38629
39911 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39912 20 2.94961 3.59079 0.11683 3.49577 20 - -
39913 1.38629 1.38629 1.38629 1.38629
39914 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39915 21 2.94961 3.59079 0.11683 3.49577 21 - -
39916 1.38629 1.38629 1.38629 1.38629
39917 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39918 22 2.94961 3.59079 0.11683 3.49577 22 - -
39919 1.38629 1.38629 1.38629 1.38629
39920 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39921 23 0.86115 2.51680 0.90816 2.37150 23 - -
39922 1.38629 1.38629 1.38629 1.38629
39923 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39924 24 0.14150 3.38325 2.80387 3.28520 24 - -
39925 1.38629 1.38629 1.38629 1.38629
39926 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39927 25 3.09163 2.59706 3.13967 0.17819 25 - -
39928 1.38629 1.38629 1.38629 1.38629
39929 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39930 26 0.14150 3.38325 2.80387 3.28520 26 - -
39931 1.38629 1.38629 1.38629 1.38629
39932 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39933 27 3.43655 0.12980 3.48587 2.83150 27 - -
39934 1.38629 1.38629 1.38629 1.38629
39935 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39936 28 3.43655 0.12980 3.48587 2.83150 28 - -
39937 1.38629 1.38629 1.38629 1.38629
39938 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39939 29 3.43655 0.12980 3.48587 2.83150 29 - -
39940 1.38629 1.38629 1.38629 1.38629
39941 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39942 30 2.94961 3.59079 0.11683 3.49577 30 - -
39943 1.38629 1.38629 1.38629 1.38629
39944 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39945 31 3.43655 0.12980 3.48587 2.83150 31 - -
39946 1.38629 1.38629 1.38629 1.38629
39947 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39948 32 3.09163 2.59706 3.13967 0.17819 32 - -
39949 1.38629 1.38629 1.38629 1.38629
39950 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39951 33 2.94961 3.59079 0.11683 3.49577 33 - -
39952 1.38629 1.38629 1.38629 1.38629
39953 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39954 34 0.14150 3.38325 2.80387 3.28520 34 - -
39955 1.38629 1.38629 1.38629 1.38629
39956 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39957 35 0.14150 3.38325 2.80387 3.28520 35 - -
39958 1.38629 1.38629 1.38629 1.38629
39959 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39960 36 3.09163 2.59706 3.13967 0.17819 36 - -
39961 1.38629 1.38629 1.38629 1.38629
39962 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39963 37 3.09163 2.59706 3.13967 0.17819 37 - -
39964 1.38629 1.38629 1.38629 1.38629
39965 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39966 38 3.09163 2.59706 3.13967 0.17819 38 - -
39967 1.38629 1.38629 1.38629 1.38629
39968 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39969 39 0.14150 3.38325 2.80387 3.28520 39 - -
39970 1.38629 1.38629 1.38629 1.38629
39971 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39972 40 0.14150 3.38325 2.80387 3.28520 40 - -
39973 1.38629 1.38629 1.38629 1.38629
39974 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39975 41 2.94961 3.59079 0.11683 3.49577 41 - -
39976 1.38629 1.38629 1.38629 1.38629
39977 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39978 42 3.43655 0.12980 3.48587 2.83150 42 - -
39979 1.38629 1.38629 1.38629 1.38629
39980 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39981 43 0.14150 3.38325 2.80387 3.28520 43 - -
39982 1.38629 1.38629 1.38629 1.38629
39983 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39984 44 3.09163 2.59706 3.13967 0.17819 44 - -
39985 1.38629 1.38629 1.38629 1.38629
39986 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
39987 45 0.14150 3.38325 2.80387 3.28520 45 - -
39988 1.38629 1.38629 1.38629 1.38629
39989 0.01858 3.99490 * 1.46634 0.26236 0.00000 *
39990 //
39991 HMMER3/b [3.0 | March 2010]
39992 NAME 4_LSU_Metazoa_4_LSU_start_fiveo_long
39993 LENG 45
39994 ALPH DNA
39995 RF no
39996 CS no
39997 MAP yes
39998 DATE Mon Feb 27 23:15:18 2012
39999 NSEQ 8
40000 EFFN 3.582031
40001 CKSUM 195965753
40002 STATS LOCAL MSV -7.5858 0.71932
40003 STATS LOCAL VITERBI -7.6704 0.71932
40004 STATS LOCAL FORWARD -4.2797 0.71932
40005 HMM A C G T
40006 m->m m->i m->d i->m i->i d->m d->d
40007 COMPO 1.26432 1.21145 1.50325 1.62255
40008 1.38629 1.38629 1.38629 1.38629
40009 0.03520 4.05734 4.05734 1.46634 0.26236 0.00000 *
40010 1 0.69498 1.31322 2.20579 2.10538 1 - -
40011 1.38629 1.38629 1.38629 1.38629
40012 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40013 2 3.16964 2.64659 3.21467 0.16615 2 - -
40014 1.38629 1.38629 1.38629 1.38629
40015 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40016 3 3.52452 0.11982 3.57001 2.89508 3 - -
40017 1.38629 1.38629 1.38629 1.38629
40018 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40019 4 3.52452 0.11982 3.57001 2.89508 4 - -
40020 1.38629 1.38629 1.38629 1.38629
40021 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40022 5 3.00224 3.66784 0.10876 3.58097 5 - -
40023 1.38629 1.38629 1.38629 1.38629
40024 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40025 6 0.13183 3.45981 2.85336 3.36912 6 - -
40026 1.38629 1.38629 1.38629 1.38629
40027 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40028 7 3.52452 0.11982 3.57001 2.89508 7 - -
40029 1.38629 1.38629 1.38629 1.38629
40030 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40031 8 3.52452 0.11982 3.57001 2.89508 8 - -
40032 1.38629 1.38629 1.38629 1.38629
40033 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40034 9 3.16964 2.64659 3.21467 0.16615 9 - -
40035 1.38629 1.38629 1.38629 1.38629
40036 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40037 10 3.52452 0.11982 3.57001 2.89508 10 - -
40038 1.38629 1.38629 1.38629 1.38629
40039 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40040 11 3.00224 3.66784 0.10876 3.58097 11 - -
40041 1.38629 1.38629 1.38629 1.38629
40042 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40043 12 3.00224 3.66784 0.10876 3.58097 12 - -
40044 1.38629 1.38629 1.38629 1.38629
40045 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40046 13 0.13183 3.45981 2.85336 3.36912 13 - -
40047 1.38629 1.38629 1.38629 1.38629
40048 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40049 14 3.16964 2.64659 3.21467 0.16615 14 - -
40050 1.38629 1.38629 1.38629 1.38629
40051 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40052 15 3.52452 0.11982 3.57001 2.89508 15 - -
40053 1.38629 1.38629 1.38629 1.38629
40054 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40055 16 0.13183 3.45981 2.85336 3.36912 16 - -
40056 1.38629 1.38629 1.38629 1.38629
40057 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40058 17 3.00224 3.66784 0.10876 3.58097 17 - -
40059 1.38629 1.38629 1.38629 1.38629
40060 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40061 18 0.13183 3.45981 2.85336 3.36912 18 - -
40062 1.38629 1.38629 1.38629 1.38629
40063 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40064 19 3.52452 0.11982 3.57001 2.89508 19 - -
40065 1.38629 1.38629 1.38629 1.38629
40066 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40067 20 3.00224 3.66784 0.10876 3.58097 20 - -
40068 1.38629 1.38629 1.38629 1.38629
40069 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40070 21 0.57857 2.62890 1.25834 2.48868 21 - -
40071 1.38629 1.38629 1.38629 1.38629
40072 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40073 22 3.00224 3.66784 0.10876 3.58097 22 - -
40074 1.38629 1.38629 1.38629 1.38629
40075 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40076 23 0.13183 3.45981 2.85336 3.36912 23 - -
40077 1.38629 1.38629 1.38629 1.38629
40078 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40079 24 3.52452 0.11982 3.57001 2.89508 24 - -
40080 1.38629 1.38629 1.38629 1.38629
40081 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40082 25 3.16964 2.64659 3.21467 0.16615 25 - -
40083 1.38629 1.38629 1.38629 1.38629
40084 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40085 26 0.13183 3.45981 2.85336 3.36912 26 - -
40086 1.38629 1.38629 1.38629 1.38629
40087 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40088 27 3.52452 0.11982 3.57001 2.89508 27 - -
40089 1.38629 1.38629 1.38629 1.38629
40090 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40091 28 3.52452 0.11982 3.57001 2.89508 28 - -
40092 1.38629 1.38629 1.38629 1.38629
40093 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40094 29 3.52452 0.11982 3.57001 2.89508 29 - -
40095 1.38629 1.38629 1.38629 1.38629
40096 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40097 30 3.00224 3.66784 0.10876 3.58097 30 - -
40098 1.38629 1.38629 1.38629 1.38629
40099 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40100 31 3.52452 0.11982 3.57001 2.89508 31 - -
40101 1.38629 1.38629 1.38629 1.38629
40102 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40103 32 3.16964 2.64659 3.21467 0.16615 32 - -
40104 1.38629 1.38629 1.38629 1.38629
40105 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40106 33 3.00224 3.66784 0.10876 3.58097 33 - -
40107 1.38629 1.38629 1.38629 1.38629
40108 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40109 34 0.13183 3.45981 2.85336 3.36912 34 - -
40110 1.38629 1.38629 1.38629 1.38629
40111 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40112 35 0.13183 3.45981 2.85336 3.36912 35 - -
40113 1.38629 1.38629 1.38629 1.38629
40114 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40115 36 2.49878 0.67370 2.57055 1.10411 36 - -
40116 1.38629 1.38629 1.38629 1.38629
40117 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40118 37 3.16964 2.64659 3.21467 0.16615 37 - -
40119 1.38629 1.38629 1.38629 1.38629
40120 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40121 38 3.16964 2.64659 3.21467 0.16615 38 - -
40122 1.38629 1.38629 1.38629 1.38629
40123 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40124 39 0.13183 3.45981 2.85336 3.36912 39 - -
40125 1.38629 1.38629 1.38629 1.38629
40126 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40127 40 0.13183 3.45981 2.85336 3.36912 40 - -
40128 1.38629 1.38629 1.38629 1.38629
40129 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40130 41 3.00224 3.66784 0.10876 3.58097 41 - -
40131 1.38629 1.38629 1.38629 1.38629
40132 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40133 42 3.52452 0.11982 3.57001 2.89508 42 - -
40134 1.38629 1.38629 1.38629 1.38629
40135 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40136 43 0.13183 3.45981 2.85336 3.36912 43 - -
40137 1.38629 1.38629 1.38629 1.38629
40138 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40139 44 3.16964 2.64659 3.21467 0.16615 44 - -
40140 1.38629 1.38629 1.38629 1.38629
40141 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547
40142 45 0.13183 3.45981 2.85336 3.36912 45 - -
40143 1.38629 1.38629 1.38629 1.38629
40144 0.01776 4.03989 * 1.46634 0.26236 0.00000 *
40145 //
40146 HMMER3/b [3.0 | March 2010]
40147 NAME 4_LSU_Metazoa_4_LSU_start_fivep_long
40148 LENG 45
40149 ALPH DNA
40150 RF no
40151 CS no
40152 MAP yes
40153 DATE Mon Feb 27 22:53:36 2012
40154 NSEQ 17
40155 EFFN 3.365967
40156 CKSUM 4287925610
40157 STATS LOCAL MSV -8.2565 0.71932
40158 STATS LOCAL VITERBI -7.6487 0.71932
40159 STATS LOCAL FORWARD -4.1993 0.71932
40160 HMM A C G T
40161 m->m m->i m->d i->m i->i d->m d->d
40162 COMPO 1.26446 1.28628 1.52443 1.49806
40163 1.38629 1.38629 1.38629 1.38629
40164 0.03659 4.01926 4.01926 1.46634 0.26236 0.00000 *
40165 1 1.43388 0.63032 2.28387 2.06115 1 - -
40166 1.38629 1.38629 1.38629 1.38629
40167 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40168 2 3.10252 2.60398 3.15014 0.17645 2 - -
40169 1.38629 1.38629 1.38629 1.38629
40170 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40171 3 3.44896 0.12833 3.49774 2.84052 3 - -
40172 1.38629 1.38629 1.38629 1.38629
40173 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40174 4 3.44896 0.12833 3.49774 2.84052 4 - -
40175 1.38629 1.38629 1.38629 1.38629
40176 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40177 5 2.95710 3.60170 0.11565 3.50782 5 - -
40178 1.38629 1.38629 1.38629 1.38629
40179 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40180 6 0.14009 3.39402 2.81085 3.29699 6 - -
40181 1.38629 1.38629 1.38629 1.38629
40182 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40183 7 3.44896 0.12833 3.49774 2.84052 7 - -
40184 1.38629 1.38629 1.38629 1.38629
40185 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40186 8 3.44896 0.12833 3.49774 2.84052 8 - -
40187 1.38629 1.38629 1.38629 1.38629
40188 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40189 9 3.10252 2.60398 3.15014 0.17645 9 - -
40190 1.38629 1.38629 1.38629 1.38629
40191 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40192 10 3.44896 0.12833 3.49774 2.84052 10 - -
40193 1.38629 1.38629 1.38629 1.38629
40194 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40195 11 0.14009 3.39402 2.81085 3.29699 11 - -
40196 1.38629 1.38629 1.38629 1.38629
40197 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40198 12 2.95710 3.60170 0.11565 3.50782 12 - -
40199 1.38629 1.38629 1.38629 1.38629
40200 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40201 13 0.14009 3.39402 2.81085 3.29699 13 - -
40202 1.38629 1.38629 1.38629 1.38629
40203 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40204 14 3.10252 2.60398 3.15014 0.17645 14 - -
40205 1.38629 1.38629 1.38629 1.38629
40206 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40207 15 3.44896 0.12833 3.49774 2.84052 15 - -
40208 1.38629 1.38629 1.38629 1.38629
40209 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40210 16 2.95710 3.60170 0.11565 3.50782 16 - -
40211 1.38629 1.38629 1.38629 1.38629
40212 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40213 17 2.95710 3.60170 0.11565 3.50782 17 - -
40214 1.38629 1.38629 1.38629 1.38629
40215 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40216 18 0.14009 3.39402 2.81085 3.29699 18 - -
40217 1.38629 1.38629 1.38629 1.38629
40218 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40219 19 3.44896 0.12833 3.49774 2.84052 19 - -
40220 1.38629 1.38629 1.38629 1.38629
40221 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40222 20 2.95710 3.60170 0.11565 3.50782 20 - -
40223 1.38629 1.38629 1.38629 1.38629
40224 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40225 21 0.14009 3.39402 2.81085 3.29699 21 - -
40226 1.38629 1.38629 1.38629 1.38629
40227 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40228 22 2.95710 3.60170 0.11565 3.50782 22 - -
40229 1.38629 1.38629 1.38629 1.38629
40230 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40231 23 0.14009 3.39402 2.81085 3.29699 23 - -
40232 1.38629 1.38629 1.38629 1.38629
40233 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40234 24 3.10252 2.60398 3.15014 0.17645 24 - -
40235 1.38629 1.38629 1.38629 1.38629
40236 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40237 25 3.10252 2.60398 3.15014 0.17645 25 - -
40238 1.38629 1.38629 1.38629 1.38629
40239 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40240 26 0.14009 3.39402 2.81085 3.29699 26 - -
40241 1.38629 1.38629 1.38629 1.38629
40242 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40243 27 3.44896 0.12833 3.49774 2.84052 27 - -
40244 1.38629 1.38629 1.38629 1.38629
40245 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40246 28 3.44896 0.12833 3.49774 2.84052 28 - -
40247 1.38629 1.38629 1.38629 1.38629
40248 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40249 29 3.44896 0.12833 3.49774 2.84052 29 - -
40250 1.38629 1.38629 1.38629 1.38629
40251 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40252 30 2.95710 3.60170 0.11565 3.50782 30 - -
40253 1.38629 1.38629 1.38629 1.38629
40254 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40255 31 3.44896 0.12833 3.49774 2.84052 31 - -
40256 1.38629 1.38629 1.38629 1.38629
40257 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40258 32 3.10252 2.60398 3.15014 0.17645 32 - -
40259 1.38629 1.38629 1.38629 1.38629
40260 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40261 33 2.95710 3.60170 0.11565 3.50782 33 - -
40262 1.38629 1.38629 1.38629 1.38629
40263 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40264 34 0.14009 3.39402 2.81085 3.29699 34 - -
40265 1.38629 1.38629 1.38629 1.38629
40266 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40267 35 0.14009 3.39402 2.81085 3.29699 35 - -
40268 1.38629 1.38629 1.38629 1.38629
40269 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40270 36 3.10252 2.60398 3.15014 0.17645 36 - -
40271 1.38629 1.38629 1.38629 1.38629
40272 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40273 37 3.10252 2.60398 3.15014 0.17645 37 - -
40274 1.38629 1.38629 1.38629 1.38629
40275 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40276 38 3.10252 2.60398 3.15014 0.17645 38 - -
40277 1.38629 1.38629 1.38629 1.38629
40278 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40279 39 0.14009 3.39402 2.81085 3.29699 39 - -
40280 1.38629 1.38629 1.38629 1.38629
40281 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40282 40 0.14009 3.39402 2.81085 3.29699 40 - -
40283 1.38629 1.38629 1.38629 1.38629
40284 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40285 41 2.95710 3.60170 0.11565 3.50782 41 - -
40286 1.38629 1.38629 1.38629 1.38629
40287 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40288 42 3.44896 0.12833 3.49774 2.84052 42 - -
40289 1.38629 1.38629 1.38629 1.38629
40290 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40291 43 0.14009 3.39402 2.81085 3.29699 43 - -
40292 1.38629 1.38629 1.38629 1.38629
40293 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40294 44 3.10252 2.60398 3.15014 0.17645 44 - -
40295 1.38629 1.38629 1.38629 1.38629
40296 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547
40297 45 0.14009 3.39402 2.81085 3.29699 45 - -
40298 1.38629 1.38629 1.38629 1.38629
40299 0.01846 4.00113 * 1.46634 0.26236 0.00000 *
40300 //
40301 HMMER3/b [3.0 | March 2010]
40302 NAME 4_LSU_Metazoa_4_LSU_start_fiveq_long
40303 LENG 45
40304 ALPH DNA
40305 RF no
40306 CS no
40307 MAP yes
40308 DATE Mon Feb 27 22:53:43 2012
40309 NSEQ 4
40310 EFFN 3.808594
40311 CKSUM 1514537771
40312 STATS LOCAL MSV -7.0892 0.71932
40313 STATS LOCAL VITERBI -7.6193 0.71932
40314 STATS LOCAL FORWARD -3.9103 0.71932
40315 HMM A C G T
40316 m->m m->i m->d i->m i->i d->m d->d
40317 COMPO 1.37675 1.44057 1.24790 1.49744
40318 1.38629 1.38629 1.38629 1.38629
40319 0.03385 4.09578 4.09578 1.46634 0.26236 0.00000 *
40320 1 3.23608 2.68870 3.27851 0.15662 1 - -
40321 1.38629 1.38629 1.38629 1.38629
40322 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40323 2 2.12257 0.97963 0.98185 2.03861 2 - -
40324 1.38629 1.38629 1.38629 1.38629
40325 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40326 3 3.23608 2.68870 3.27851 0.15662 3 - -
40327 1.38629 1.38629 1.38629 1.38629
40328 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40329 4 3.04531 3.73144 0.10258 3.65148 4 - -
40330 1.38629 1.38629 1.38629 1.38629
40331 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40332 5 3.04531 3.73144 0.10258 3.65148 5 - -
40333 1.38629 1.38629 1.38629 1.38629
40334 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40335 6 3.04531 3.73144 0.10258 3.65148 6 - -
40336 1.38629 1.38629 1.38629 1.38629
40337 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40338 7 3.59776 0.11218 3.63995 2.94742 7 - -
40339 1.38629 1.38629 1.38629 1.38629
40340 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40341 8 3.59776 0.11218 3.63995 2.94742 8 - -
40342 1.38629 1.38629 1.38629 1.38629
40343 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40344 9 3.23608 2.68870 3.27851 0.15662 9 - -
40345 1.38629 1.38629 1.38629 1.38629
40346 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40347 10 3.59776 0.11218 3.63995 2.94742 10 - -
40348 1.38629 1.38629 1.38629 1.38629
40349 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40350 11 0.12430 3.52395 2.89458 3.43954 11 - -
40351 1.38629 1.38629 1.38629 1.38629
40352 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40353 12 3.04531 3.73144 0.10258 3.65148 12 - -
40354 1.38629 1.38629 1.38629 1.38629
40355 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40356 13 3.04531 3.73144 0.10258 3.65148 13 - -
40357 1.38629 1.38629 1.38629 1.38629
40358 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40359 14 3.23608 2.68870 3.27851 0.15662 14 - -
40360 1.38629 1.38629 1.38629 1.38629
40361 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40362 15 3.59776 0.11218 3.63995 2.94742 15 - -
40363 1.38629 1.38629 1.38629 1.38629
40364 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40365 16 0.12430 3.52395 2.89458 3.43954 16 - -
40366 1.38629 1.38629 1.38629 1.38629
40367 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40368 17 3.04531 3.73144 0.10258 3.65148 17 - -
40369 1.38629 1.38629 1.38629 1.38629
40370 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40371 18 0.37490 2.86983 1.65322 2.74111 18 - -
40372 1.38629 1.38629 1.38629 1.38629
40373 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40374 19 2.70582 1.56363 2.76927 0.41385 19 - -
40375 1.38629 1.38629 1.38629 1.38629
40376 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40377 20 3.04531 3.73144 0.10258 3.65148 20 - -
40378 1.38629 1.38629 1.38629 1.38629
40379 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40380 21 0.12430 3.52395 2.89458 3.43954 21 - -
40381 1.38629 1.38629 1.38629 1.38629
40382 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40383 22 3.04531 3.73144 0.10258 3.65148 22 - -
40384 1.38629 1.38629 1.38629 1.38629
40385 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40386 23 0.81347 2.59501 0.92651 2.45219 23 - -
40387 1.38629 1.38629 1.38629 1.38629
40388 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40389 24 3.59776 0.11218 3.63995 2.94742 24 - -
40390 1.38629 1.38629 1.38629 1.38629
40391 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40392 25 3.04531 3.73144 0.10258 3.65148 25 - -
40393 1.38629 1.38629 1.38629 1.38629
40394 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40395 26 0.12430 3.52395 2.89458 3.43954 26 - -
40396 1.38629 1.38629 1.38629 1.38629
40397 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40398 27 3.59776 0.11218 3.63995 2.94742 27 - -
40399 1.38629 1.38629 1.38629 1.38629
40400 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40401 28 3.59776 0.11218 3.63995 2.94742 28 - -
40402 1.38629 1.38629 1.38629 1.38629
40403 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40404 29 3.59776 0.11218 3.63995 2.94742 29 - -
40405 1.38629 1.38629 1.38629 1.38629
40406 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40407 30 3.04531 3.73144 0.10258 3.65148 30 - -
40408 1.38629 1.38629 1.38629 1.38629
40409 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40410 31 2.75233 0.41169 2.82025 1.54131 31 - -
40411 1.38629 1.38629 1.38629 1.38629
40412 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40413 32 3.23608 2.68870 3.27851 0.15662 32 - -
40414 1.38629 1.38629 1.38629 1.38629
40415 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40416 33 3.04531 3.73144 0.10258 3.65148 33 - -
40417 1.38629 1.38629 1.38629 1.38629
40418 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40419 34 0.12430 3.52395 2.89458 3.43954 34 - -
40420 1.38629 1.38629 1.38629 1.38629
40421 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40422 35 0.12430 3.52395 2.89458 3.43954 35 - -
40423 1.38629 1.38629 1.38629 1.38629
40424 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40425 36 3.23608 2.68870 3.27851 0.15662 36 - -
40426 1.38629 1.38629 1.38629 1.38629
40427 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40428 37 3.23608 2.68870 3.27851 0.15662 37 - -
40429 1.38629 1.38629 1.38629 1.38629
40430 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40431 38 3.23608 2.68870 3.27851 0.15662 38 - -
40432 1.38629 1.38629 1.38629 1.38629
40433 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40434 39 0.12430 3.52395 2.89458 3.43954 39 - -
40435 1.38629 1.38629 1.38629 1.38629
40436 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40437 40 0.12430 3.52395 2.89458 3.43954 40 - -
40438 1.38629 1.38629 1.38629 1.38629
40439 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40440 41 3.04531 3.73144 0.10258 3.65148 41 - -
40441 1.38629 1.38629 1.38629 1.38629
40442 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40443 42 3.59776 0.11218 3.63995 2.94742 42 - -
40444 1.38629 1.38629 1.38629 1.38629
40445 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40446 43 0.12430 3.52395 2.89458 3.43954 43 - -
40447 1.38629 1.38629 1.38629 1.38629
40448 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40449 44 3.23608 2.68870 3.27851 0.15662 44 - -
40450 1.38629 1.38629 1.38629 1.38629
40451 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547
40452 45 0.12430 3.52395 2.89458 3.43954 45 - -
40453 1.38629 1.38629 1.38629 1.38629
40454 0.01707 4.07899 * 1.46634 0.26236 0.00000 *
40455 //
40456 HMMER3/b [3.0 | March 2010]
40457 NAME 4_LSU_Metazoa_4_LSU_start_fiver_long
40458 LENG 45
40459 ALPH DNA
40460 RF no
40461 CS no
40462 MAP yes
40463 DATE Mon Feb 27 22:53:51 2012
40464 NSEQ 30
40465 EFFN 3.277588
40466 CKSUM 2425933469
40467 STATS LOCAL MSV -8.2755 0.71933
40468 STATS LOCAL VITERBI -7.7804 0.71933
40469 STATS LOCAL FORWARD -4.0974 0.71933
40470 HMM A C G T
40471 m->m m->i m->d i->m i->i d->m d->d
40472 COMPO 1.20618 1.26770 1.40145 1.75480
40473 1.38629 1.38629 1.38629 1.38629
40474 0.03720 4.00325 4.00325 1.46634 0.26236 0.00000 *
40475 1 1.36735 2.65257 0.52169 2.51047 1 - -
40476 1.38629 1.38629 1.38629 1.38629
40477 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40478 2 3.41634 0.13223 3.46651 2.81677 2 - -
40479 1.38629 1.38629 1.38629 1.38629
40480 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40481 3 2.93735 3.57297 0.11879 3.47612 3 - -
40482 1.38629 1.38629 1.38629 1.38629
40483 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40484 4 3.41634 0.13223 3.46651 2.81677 4 - -
40485 1.38629 1.38629 1.38629 1.38629
40486 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40487 5 2.93735 3.57297 0.11879 3.47612 5 - -
40488 1.38629 1.38629 1.38629 1.38629
40489 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40490 6 0.14383 3.36572 2.79247 3.26601 6 - -
40491 1.38629 1.38629 1.38629 1.38629
40492 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40493 7 3.41634 0.13223 3.46651 2.81677 7 - -
40494 1.38629 1.38629 1.38629 1.38629
40495 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40496 8 3.41634 0.13223 3.46651 2.81677 8 - -
40497 1.38629 1.38629 1.38629 1.38629
40498 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40499 9 3.07395 2.58581 3.12266 0.18106 9 - -
40500 1.38629 1.38629 1.38629 1.38629
40501 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40502 10 3.41634 0.13223 3.46651 2.81677 10 - -
40503 1.38629 1.38629 1.38629 1.38629
40504 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40505 11 0.14383 3.36572 2.79247 3.26601 11 - -
40506 1.38629 1.38629 1.38629 1.38629
40507 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40508 12 2.93735 3.57297 0.11879 3.47612 12 - -
40509 1.38629 1.38629 1.38629 1.38629
40510 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40511 13 0.14383 3.36572 2.79247 3.26601 13 - -
40512 1.38629 1.38629 1.38629 1.38629
40513 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40514 14 3.07395 2.58581 3.12266 0.18106 14 - -
40515 1.38629 1.38629 1.38629 1.38629
40516 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40517 15 3.41634 0.13223 3.46651 2.81677 15 - -
40518 1.38629 1.38629 1.38629 1.38629
40519 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40520 16 0.14383 3.36572 2.79247 3.26601 16 - -
40521 1.38629 1.38629 1.38629 1.38629
40522 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40523 17 2.93735 3.57297 0.11879 3.47612 17 - -
40524 1.38629 1.38629 1.38629 1.38629
40525 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40526 18 0.14383 3.36572 2.79247 3.26601 18 - -
40527 1.38629 1.38629 1.38629 1.38629
40528 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40529 19 3.41634 0.13223 3.46651 2.81677 19 - -
40530 1.38629 1.38629 1.38629 1.38629
40531 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40532 20 2.93735 3.57297 0.11879 3.47612 20 - -
40533 1.38629 1.38629 1.38629 1.38629
40534 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40535 21 0.14383 3.36572 2.79247 3.26601 21 - -
40536 1.38629 1.38629 1.38629 1.38629
40537 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40538 22 2.93735 3.57297 0.11879 3.47612 22 - -
40539 1.38629 1.38629 1.38629 1.38629
40540 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40541 23 0.14383 3.36572 2.79247 3.26601 23 - -
40542 1.38629 1.38629 1.38629 1.38629
40543 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40544 24 3.41634 0.13223 3.46651 2.81677 24 - -
40545 1.38629 1.38629 1.38629 1.38629
40546 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40547 25 2.93735 3.57297 0.11879 3.47612 25 - -
40548 1.38629 1.38629 1.38629 1.38629
40549 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40550 26 0.14383 3.36572 2.79247 3.26601 26 - -
40551 1.38629 1.38629 1.38629 1.38629
40552 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40553 27 3.41634 0.13223 3.46651 2.81677 27 - -
40554 1.38629 1.38629 1.38629 1.38629
40555 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40556 28 3.41634 0.13223 3.46651 2.81677 28 - -
40557 1.38629 1.38629 1.38629 1.38629
40558 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40559 29 3.41634 0.13223 3.46651 2.81677 29 - -
40560 1.38629 1.38629 1.38629 1.38629
40561 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40562 30 2.93735 3.57297 0.11879 3.47612 30 - -
40563 1.38629 1.38629 1.38629 1.38629
40564 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40565 31 3.41634 0.13223 3.46651 2.81677 31 - -
40566 1.38629 1.38629 1.38629 1.38629
40567 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40568 32 3.07395 2.58581 3.12266 0.18106 32 - -
40569 1.38629 1.38629 1.38629 1.38629
40570 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40571 33 2.93735 3.57297 0.11879 3.47612 33 - -
40572 1.38629 1.38629 1.38629 1.38629
40573 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40574 34 0.14383 3.36572 2.79247 3.26601 34 - -
40575 1.38629 1.38629 1.38629 1.38629
40576 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40577 35 0.14383 3.36572 2.79247 3.26601 35 - -
40578 1.38629 1.38629 1.38629 1.38629
40579 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40580 36 2.96771 2.33468 3.02010 0.21947 36 - -
40581 1.38629 1.38629 1.38629 1.38629
40582 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40583 37 3.07395 2.58581 3.12266 0.18106 37 - -
40584 1.38629 1.38629 1.38629 1.38629
40585 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40586 38 3.07395 2.58581 3.12266 0.18106 38 - -
40587 1.38629 1.38629 1.38629 1.38629
40588 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40589 39 0.14383 3.36572 2.79247 3.26601 39 - -
40590 1.38629 1.38629 1.38629 1.38629
40591 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40592 40 0.14383 3.36572 2.79247 3.26601 40 - -
40593 1.38629 1.38629 1.38629 1.38629
40594 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40595 41 2.93735 3.57297 0.11879 3.47612 41 - -
40596 1.38629 1.38629 1.38629 1.38629
40597 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40598 42 3.41634 0.13223 3.46651 2.81677 42 - -
40599 1.38629 1.38629 1.38629 1.38629
40600 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40601 43 0.14383 3.36572 2.79247 3.26601 43 - -
40602 1.38629 1.38629 1.38629 1.38629
40603 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40604 44 3.07395 2.58581 3.12266 0.18106 44 - -
40605 1.38629 1.38629 1.38629 1.38629
40606 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547
40607 45 0.14383 3.36572 2.79247 3.26601 45 - -
40608 1.38629 1.38629 1.38629 1.38629
40609 0.01877 3.98483 * 1.46634 0.26236 0.00000 *
40610 //
40611 HMMER3/b [3.0 | March 2010]
40612 NAME 4_LSU_Metazoa_4_LSU_start_fives_long
40613 LENG 45
40614 ALPH DNA
40615 RF no
40616 CS no
40617 MAP yes
40618 DATE Mon Feb 27 22:53:57 2012
40619 NSEQ 4
40620 EFFN 3.285156
40621 CKSUM 1153157283
40622 STATS LOCAL MSV -8.1433 0.71932
40623 STATS LOCAL VITERBI -7.6563 0.71932
40624 STATS LOCAL FORWARD -3.9177 0.71932
40625 HMM A C G T
40626 m->m m->i m->d i->m i->i d->m d->d
40627 COMPO 1.21903 1.45908 1.52472 1.36903
40628 1.38629 1.38629 1.38629 1.38629
40629 0.03714 4.00463 4.00463 1.46634 0.26236 0.00000 *
40630 1 3.07642 2.58739 3.12504 0.18065 1 - -
40631 1.38629 1.38629 1.38629 1.38629
40632 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40633 2 3.07642 2.58739 3.12504 0.18065 2 - -
40634 1.38629 1.38629 1.38629 1.38629
40635 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40636 3 3.07642 2.58739 3.12504 0.18065 3 - -
40637 1.38629 1.38629 1.38629 1.38629
40638 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40639 4 3.41917 0.13188 3.46922 2.81884 4 - -
40640 1.38629 1.38629 1.38629 1.38629
40641 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40642 5 2.93908 3.57547 0.11851 3.47887 5 - -
40643 1.38629 1.38629 1.38629 1.38629
40644 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40645 6 0.14350 3.36817 2.79406 3.26870 6 - -
40646 1.38629 1.38629 1.38629 1.38629
40647 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40648 7 3.41917 0.13188 3.46922 2.81884 7 - -
40649 1.38629 1.38629 1.38629 1.38629
40650 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40651 8 3.41917 0.13188 3.46922 2.81884 8 - -
40652 1.38629 1.38629 1.38629 1.38629
40653 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40654 9 3.07642 2.58739 3.12504 0.18065 9 - -
40655 1.38629 1.38629 1.38629 1.38629
40656 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40657 10 2.93908 3.57547 0.11851 3.47887 10 - -
40658 1.38629 1.38629 1.38629 1.38629
40659 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40660 11 0.14350 3.36817 2.79406 3.26870 11 - -
40661 1.38629 1.38629 1.38629 1.38629
40662 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40663 12 2.93908 3.57547 0.11851 3.47887 12 - -
40664 1.38629 1.38629 1.38629 1.38629
40665 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40666 13 0.14350 3.36817 2.79406 3.26870 13 - -
40667 1.38629 1.38629 1.38629 1.38629
40668 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40669 14 3.07642 2.58739 3.12504 0.18065 14 - -
40670 1.38629 1.38629 1.38629 1.38629
40671 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40672 15 3.07642 2.58739 3.12504 0.18065 15 - -
40673 1.38629 1.38629 1.38629 1.38629
40674 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40675 16 0.14350 3.36817 2.79406 3.26870 16 - -
40676 1.38629 1.38629 1.38629 1.38629
40677 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40678 17 2.93908 3.57547 0.11851 3.47887 17 - -
40679 1.38629 1.38629 1.38629 1.38629
40680 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40681 18 2.93908 3.57547 0.11851 3.47887 18 - -
40682 1.38629 1.38629 1.38629 1.38629
40683 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40684 19 3.41917 0.13188 3.46922 2.81884 19 - -
40685 1.38629 1.38629 1.38629 1.38629
40686 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40687 20 0.14350 3.36817 2.79406 3.26870 20 - -
40688 1.38629 1.38629 1.38629 1.38629
40689 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40690 21 0.14350 3.36817 2.79406 3.26870 21 - -
40691 1.38629 1.38629 1.38629 1.38629
40692 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40693 22 2.93908 3.57547 0.11851 3.47887 22 - -
40694 1.38629 1.38629 1.38629 1.38629
40695 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40696 23 0.14350 3.36817 2.79406 3.26870 23 - -
40697 1.38629 1.38629 1.38629 1.38629
40698 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40699 24 3.07642 2.58739 3.12504 0.18065 24 - -
40700 1.38629 1.38629 1.38629 1.38629
40701 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40702 25 3.07642 2.58739 3.12504 0.18065 25 - -
40703 1.38629 1.38629 1.38629 1.38629
40704 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40705 26 0.14350 3.36817 2.79406 3.26870 26 - -
40706 1.38629 1.38629 1.38629 1.38629
40707 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40708 27 3.41917 0.13188 3.46922 2.81884 27 - -
40709 1.38629 1.38629 1.38629 1.38629
40710 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40711 28 3.41917 0.13188 3.46922 2.81884 28 - -
40712 1.38629 1.38629 1.38629 1.38629
40713 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40714 29 3.41917 0.13188 3.46922 2.81884 29 - -
40715 1.38629 1.38629 1.38629 1.38629
40716 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40717 30 2.93908 3.57547 0.11851 3.47887 30 - -
40718 1.38629 1.38629 1.38629 1.38629
40719 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40720 31 3.41917 0.13188 3.46922 2.81884 31 - -
40721 1.38629 1.38629 1.38629 1.38629
40722 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40723 32 3.41917 0.13188 3.46922 2.81884 32 - -
40724 1.38629 1.38629 1.38629 1.38629
40725 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40726 33 2.93908 3.57547 0.11851 3.47887 33 - -
40727 1.38629 1.38629 1.38629 1.38629
40728 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40729 34 0.14350 3.36817 2.79406 3.26870 34 - -
40730 1.38629 1.38629 1.38629 1.38629
40731 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40732 35 0.14350 3.36817 2.79406 3.26870 35 - -
40733 1.38629 1.38629 1.38629 1.38629
40734 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40735 36 3.07642 2.58739 3.12504 0.18065 36 - -
40736 1.38629 1.38629 1.38629 1.38629
40737 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40738 37 3.07642 2.58739 3.12504 0.18065 37 - -
40739 1.38629 1.38629 1.38629 1.38629
40740 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40741 38 3.07642 2.58739 3.12504 0.18065 38 - -
40742 1.38629 1.38629 1.38629 1.38629
40743 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40744 39 0.14350 3.36817 2.79406 3.26870 39 - -
40745 1.38629 1.38629 1.38629 1.38629
40746 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40747 40 0.14350 3.36817 2.79406 3.26870 40 - -
40748 1.38629 1.38629 1.38629 1.38629
40749 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40750 41 2.93908 3.57547 0.11851 3.47887 41 - -
40751 1.38629 1.38629 1.38629 1.38629
40752 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40753 42 3.41917 0.13188 3.46922 2.81884 42 - -
40754 1.38629 1.38629 1.38629 1.38629
40755 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40756 43 0.14350 3.36817 2.79406 3.26870 43 - -
40757 1.38629 1.38629 1.38629 1.38629
40758 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40759 44 3.07642 2.58739 3.12504 0.18065 44 - -
40760 1.38629 1.38629 1.38629 1.38629
40761 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
40762 45 0.14350 3.36817 2.79406 3.26870 45 - -
40763 1.38629 1.38629 1.38629 1.38629
40764 0.01874 3.98623 * 1.46634 0.26236 0.00000 *
40765 //
40766 HMMER3/b [3.0 | March 2010]
40767 NAME 4_LSU_Metazoa_4_LSU_start_fivet_long
40768 LENG 45
40769 ALPH DNA
40770 RF no
40771 CS no
40772 MAP yes
40773 DATE Mon Feb 27 22:54:02 2012
40774 NSEQ 9
40775 EFFN 3.405762
40776 CKSUM 1998620783
40777 STATS LOCAL MSV -7.7501 0.71933
40778 STATS LOCAL VITERBI -7.5664 0.71933
40779 STATS LOCAL FORWARD -4.1179 0.71933
40780 HMM A C G T
40781 m->m m->i m->d i->m i->i d->m d->d
40782 COMPO 1.26772 1.30941 1.54598 1.44628
40783 1.38629 1.38629 1.38629 1.38629
40784 0.03633 4.02638 4.02638 1.46634 0.26236 0.00000 *
40785 1 3.46331 0.12666 3.51148 2.85093 1 - -
40786 1.38629 1.38629 1.38629 1.38629
40787 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40788 2 3.11517 2.61202 3.16230 0.17445 2 - -
40789 1.38629 1.38629 1.38629 1.38629
40790 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40791 3 2.64758 1.62824 2.71176 0.40574 3 - -
40792 1.38629 1.38629 1.38629 1.38629
40793 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40794 4 2.96574 3.61431 0.11430 3.52175 4 - -
40795 1.38629 1.38629 1.38629 1.38629
40796 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40797 5 0.13848 3.40650 2.81894 3.31066 5 - -
40798 1.38629 1.38629 1.38629 1.38629
40799 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40800 6 3.46331 0.12666 3.51148 2.85093 6 - -
40801 1.38629 1.38629 1.38629 1.38629
40802 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40803 7 3.46331 0.12666 3.51148 2.85093 7 - -
40804 1.38629 1.38629 1.38629 1.38629
40805 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40806 8 3.11517 2.61202 3.16230 0.17445 8 - -
40807 1.38629 1.38629 1.38629 1.38629
40808 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40809 9 3.46331 0.12666 3.51148 2.85093 9 - -
40810 1.38629 1.38629 1.38629 1.38629
40811 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40812 10 0.13848 3.40650 2.81894 3.31066 10 - -
40813 1.38629 1.38629 1.38629 1.38629
40814 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40815 11 2.96574 3.61431 0.11430 3.52175 11 - -
40816 1.38629 1.38629 1.38629 1.38629
40817 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40818 12 0.13848 3.40650 2.81894 3.31066 12 - -
40819 1.38629 1.38629 1.38629 1.38629
40820 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40821 13 3.11517 2.61202 3.16230 0.17445 13 - -
40822 1.38629 1.38629 1.38629 1.38629
40823 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40824 14 3.46331 0.12666 3.51148 2.85093 14 - -
40825 1.38629 1.38629 1.38629 1.38629
40826 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40827 15 0.13848 3.40650 2.81894 3.31066 15 - -
40828 1.38629 1.38629 1.38629 1.38629
40829 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40830 16 2.96574 3.61431 0.11430 3.52175 16 - -
40831 1.38629 1.38629 1.38629 1.38629
40832 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40833 17 2.96574 3.61431 0.11430 3.52175 17 - -
40834 1.38629 1.38629 1.38629 1.38629
40835 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40836 18 3.46331 0.12666 3.51148 2.85093 18 - -
40837 1.38629 1.38629 1.38629 1.38629
40838 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40839 19 0.13848 3.40650 2.81894 3.31066 19 - -
40840 1.38629 1.38629 1.38629 1.38629
40841 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40842 20 0.13848 3.40650 2.81894 3.31066 20 - -
40843 1.38629 1.38629 1.38629 1.38629
40844 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40845 21 2.96574 3.61431 0.11430 3.52175 21 - -
40846 1.38629 1.38629 1.38629 1.38629
40847 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40848 22 1.74479 2.89395 0.34711 2.76092 22 - -
40849 1.38629 1.38629 1.38629 1.38629
40850 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40851 23 3.46331 0.12666 3.51148 2.85093 23 - -
40852 1.38629 1.38629 1.38629 1.38629
40853 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40854 24 3.11517 2.61202 3.16230 0.17445 24 - -
40855 1.38629 1.38629 1.38629 1.38629
40856 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40857 25 0.13848 3.40650 2.81894 3.31066 25 - -
40858 1.38629 1.38629 1.38629 1.38629
40859 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40860 26 3.46331 0.12666 3.51148 2.85093 26 - -
40861 1.38629 1.38629 1.38629 1.38629
40862 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40863 27 3.46331 0.12666 3.51148 2.85093 27 - -
40864 1.38629 1.38629 1.38629 1.38629
40865 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40866 28 3.46331 0.12666 3.51148 2.85093 28 - -
40867 1.38629 1.38629 1.38629 1.38629
40868 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40869 29 2.96574 3.61431 0.11430 3.52175 29 - -
40870 1.38629 1.38629 1.38629 1.38629
40871 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40872 30 3.46331 0.12666 3.51148 2.85093 30 - -
40873 1.38629 1.38629 1.38629 1.38629
40874 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40875 31 3.11517 2.61202 3.16230 0.17445 31 - -
40876 1.38629 1.38629 1.38629 1.38629
40877 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40878 32 2.96574 3.61431 0.11430 3.52175 32 - -
40879 1.38629 1.38629 1.38629 1.38629
40880 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40881 33 0.13848 3.40650 2.81894 3.31066 33 - -
40882 1.38629 1.38629 1.38629 1.38629
40883 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40884 34 0.13848 3.40650 2.81894 3.31066 34 - -
40885 1.38629 1.38629 1.38629 1.38629
40886 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40887 35 3.11517 2.61202 3.16230 0.17445 35 - -
40888 1.38629 1.38629 1.38629 1.38629
40889 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40890 36 3.11517 2.61202 3.16230 0.17445 36 - -
40891 1.38629 1.38629 1.38629 1.38629
40892 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40893 37 3.11517 2.61202 3.16230 0.17445 37 - -
40894 1.38629 1.38629 1.38629 1.38629
40895 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40896 38 0.13848 3.40650 2.81894 3.31066 38 - -
40897 1.38629 1.38629 1.38629 1.38629
40898 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40899 39 0.13848 3.40650 2.81894 3.31066 39 - -
40900 1.38629 1.38629 1.38629 1.38629
40901 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40902 40 2.96574 3.61431 0.11430 3.52175 40 - -
40903 1.38629 1.38629 1.38629 1.38629
40904 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40905 41 3.46331 0.12666 3.51148 2.85093 41 - -
40906 1.38629 1.38629 1.38629 1.38629
40907 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40908 42 0.13848 3.40650 2.81894 3.31066 42 - -
40909 1.38629 1.38629 1.38629 1.38629
40910 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40911 43 3.11517 2.61202 3.16230 0.17445 43 - -
40912 1.38629 1.38629 1.38629 1.38629
40913 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40914 44 0.13848 3.40650 2.81894 3.31066 44 - -
40915 1.38629 1.38629 1.38629 1.38629
40916 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547
40917 45 3.11517 2.61202 3.16230 0.17445 45 - -
40918 1.38629 1.38629 1.38629 1.38629
40919 0.01833 4.00838 * 1.46634 0.26236 0.00000 *
40920 //
40921 HMMER3/b [3.0 | March 2010]
40922 NAME 4_LSU_Metazoa_4_LSU_start_fiveu_long
40923 LENG 45
40924 ALPH DNA
40925 RF no
40926 CS no
40927 MAP yes
40928 DATE Mon Feb 27 22:54:08 2012
40929 NSEQ 3
40930 EFFN 3.000000
40931 CKSUM 1112863540
40932 STATS LOCAL MSV -7.9703 0.72001
40933 STATS LOCAL VITERBI -7.7320 0.72001
40934 STATS LOCAL FORWARD -3.8267 0.72001
40935 HMM A C G T
40936 m->m m->i m->d i->m i->i d->m d->d
40937 COMPO 1.16711 1.27728 1.44572 1.74661
40938 1.38629 1.38629 1.38629 1.38629
40939 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
40940 1 0.15719 3.27118 2.73043 3.16274 1 - -
40941 1.38629 1.38629 1.38629 1.38629
40942 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40943 2 0.15719 3.27118 2.73043 3.16274 2 - -
40944 1.38629 1.38629 1.38629 1.38629
40945 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40946 3 2.86982 3.47591 0.13017 3.36931 3 - -
40947 1.38629 1.38629 1.38629 1.38629
40948 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40949 4 3.30705 0.14631 3.36166 2.73626 4 - -
40950 1.38629 1.38629 1.38629 1.38629
40951 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40952 5 2.86982 3.47591 0.13017 3.36931 5 - -
40953 1.38629 1.38629 1.38629 1.38629
40954 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40955 6 0.15719 3.27118 2.73043 3.16274 6 - -
40956 1.38629 1.38629 1.38629 1.38629
40957 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40958 7 3.30705 0.14631 3.36166 2.73626 7 - -
40959 1.38629 1.38629 1.38629 1.38629
40960 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40961 8 3.30705 0.14631 3.36166 2.73626 8 - -
40962 1.38629 1.38629 1.38629 1.38629
40963 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40964 9 2.97980 2.52563 3.03204 0.19727 9 - -
40965 1.38629 1.38629 1.38629 1.38629
40966 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40967 10 3.30705 0.14631 3.36166 2.73626 10 - -
40968 1.38629 1.38629 1.38629 1.38629
40969 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40970 11 0.15719 3.27118 2.73043 3.16274 11 - -
40971 1.38629 1.38629 1.38629 1.38629
40972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40973 12 2.86982 3.47591 0.13017 3.36931 12 - -
40974 1.38629 1.38629 1.38629 1.38629
40975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40976 13 0.15719 3.27118 2.73043 3.16274 13 - -
40977 1.38629 1.38629 1.38629 1.38629
40978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40979 14 2.97980 2.52563 3.03204 0.19727 14 - -
40980 1.38629 1.38629 1.38629 1.38629
40981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40982 15 3.30705 0.14631 3.36166 2.73626 15 - -
40983 1.38629 1.38629 1.38629 1.38629
40984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40985 16 0.15719 3.27118 2.73043 3.16274 16 - -
40986 1.38629 1.38629 1.38629 1.38629
40987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40988 17 2.86982 3.47591 0.13017 3.36931 17 - -
40989 1.38629 1.38629 1.38629 1.38629
40990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40991 18 2.86982 3.47591 0.13017 3.36931 18 - -
40992 1.38629 1.38629 1.38629 1.38629
40993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40994 19 3.30705 0.14631 3.36166 2.73626 19 - -
40995 1.38629 1.38629 1.38629 1.38629
40996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
40997 20 2.86982 3.47591 0.13017 3.36931 20 - -
40998 1.38629 1.38629 1.38629 1.38629
40999 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41000 21 0.15719 3.27118 2.73043 3.16274 21 - -
41001 1.38629 1.38629 1.38629 1.38629
41002 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41003 22 2.86982 3.47591 0.13017 3.36931 22 - -
41004 1.38629 1.38629 1.38629 1.38629
41005 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41006 23 0.15719 3.27118 2.73043 3.16274 23 - -
41007 1.38629 1.38629 1.38629 1.38629
41008 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41009 24 3.30705 0.14631 3.36166 2.73626 24 - -
41010 1.38629 1.38629 1.38629 1.38629
41011 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41012 25 2.97980 2.52563 3.03204 0.19727 25 - -
41013 1.38629 1.38629 1.38629 1.38629
41014 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41015 26 0.15719 3.27118 2.73043 3.16274 26 - -
41016 1.38629 1.38629 1.38629 1.38629
41017 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41018 27 3.30705 0.14631 3.36166 2.73626 27 - -
41019 1.38629 1.38629 1.38629 1.38629
41020 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41021 28 3.30705 0.14631 3.36166 2.73626 28 - -
41022 1.38629 1.38629 1.38629 1.38629
41023 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41024 29 3.30705 0.14631 3.36166 2.73626 29 - -
41025 1.38629 1.38629 1.38629 1.38629
41026 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41027 30 2.86982 3.47591 0.13017 3.36931 30 - -
41028 1.38629 1.38629 1.38629 1.38629
41029 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41030 31 3.30705 0.14631 3.36166 2.73626 31 - -
41031 1.38629 1.38629 1.38629 1.38629
41032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41033 32 3.30705 0.14631 3.36166 2.73626 32 - -
41034 1.38629 1.38629 1.38629 1.38629
41035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41036 33 2.86982 3.47591 0.13017 3.36931 33 - -
41037 1.38629 1.38629 1.38629 1.38629
41038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41039 34 0.15719 3.27118 2.73043 3.16274 34 - -
41040 1.38629 1.38629 1.38629 1.38629
41041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41042 35 0.15719 3.27118 2.73043 3.16274 35 - -
41043 1.38629 1.38629 1.38629 1.38629
41044 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41045 36 2.97980 2.52563 3.03204 0.19727 36 - -
41046 1.38629 1.38629 1.38629 1.38629
41047 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41048 37 2.97980 2.52563 3.03204 0.19727 37 - -
41049 1.38629 1.38629 1.38629 1.38629
41050 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41051 38 2.97980 2.52563 3.03204 0.19727 38 - -
41052 1.38629 1.38629 1.38629 1.38629
41053 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41054 39 0.15719 3.27118 2.73043 3.16274 39 - -
41055 1.38629 1.38629 1.38629 1.38629
41056 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41057 40 0.15719 3.27118 2.73043 3.16274 40 - -
41058 1.38629 1.38629 1.38629 1.38629
41059 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41060 41 2.86982 3.47591 0.13017 3.36931 41 - -
41061 1.38629 1.38629 1.38629 1.38629
41062 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41063 42 3.30705 0.14631 3.36166 2.73626 42 - -
41064 1.38629 1.38629 1.38629 1.38629
41065 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41066 43 0.15719 3.27118 2.73043 3.16274 43 - -
41067 1.38629 1.38629 1.38629 1.38629
41068 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41069 44 2.97980 2.52563 3.03204 0.19727 44 - -
41070 1.38629 1.38629 1.38629 1.38629
41071 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41072 45 0.15719 3.27118 2.73043 3.16274 45 - -
41073 1.38629 1.38629 1.38629 1.38629
41074 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
41075 //
41076 HMMER3/b [3.0 | March 2010]
41077 NAME 4_LSU_Metazoa_4_LSU_start_fivev_long
41078 LENG 45
41079 ALPH DNA
41080 RF no
41081 CS no
41082 MAP yes
41083 DATE Mon Feb 27 22:54:14 2012
41084 NSEQ 3
41085 EFFN 3.000000
41086 CKSUM 2351947980
41087 STATS LOCAL MSV -8.2579 0.72001
41088 STATS LOCAL VITERBI -7.8277 0.72001
41089 STATS LOCAL FORWARD -4.0042 0.72001
41090 HMM A C G T
41091 m->m m->i m->d i->m i->i d->m d->d
41092 COMPO 1.16841 1.27582 1.44578 1.74654
41093 1.38629 1.38629 1.38629 1.38629
41094 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
41095 1 0.15719 3.27118 2.73043 3.16274 1 - -
41096 1.38629 1.38629 1.38629 1.38629
41097 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41098 2 3.30705 0.14631 3.36166 2.73626 2 - -
41099 1.38629 1.38629 1.38629 1.38629
41100 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41101 3 2.86982 3.47591 0.13017 3.36931 3 - -
41102 1.38629 1.38629 1.38629 1.38629
41103 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41104 4 3.30705 0.14631 3.36166 2.73626 4 - -
41105 1.38629 1.38629 1.38629 1.38629
41106 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41107 5 2.86982 3.47591 0.13017 3.36931 5 - -
41108 1.38629 1.38629 1.38629 1.38629
41109 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41110 6 0.15719 3.27118 2.73043 3.16274 6 - -
41111 1.38629 1.38629 1.38629 1.38629
41112 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41113 7 3.30705 0.14631 3.36166 2.73626 7 - -
41114 1.38629 1.38629 1.38629 1.38629
41115 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41116 8 3.30705 0.14631 3.36166 2.73626 8 - -
41117 1.38629 1.38629 1.38629 1.38629
41118 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41119 9 2.97980 2.52563 3.03204 0.19727 9 - -
41120 1.38629 1.38629 1.38629 1.38629
41121 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41122 10 3.30705 0.14631 3.36166 2.73626 10 - -
41123 1.38629 1.38629 1.38629 1.38629
41124 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41125 11 0.15719 3.27118 2.73043 3.16274 11 - -
41126 1.38629 1.38629 1.38629 1.38629
41127 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41128 12 2.86982 3.47591 0.13017 3.36931 12 - -
41129 1.38629 1.38629 1.38629 1.38629
41130 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41131 13 0.15719 3.27118 2.73043 3.16274 13 - -
41132 1.38629 1.38629 1.38629 1.38629
41133 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41134 14 2.97980 2.52563 3.03204 0.19727 14 - -
41135 1.38629 1.38629 1.38629 1.38629
41136 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41137 15 3.30705 0.14631 3.36166 2.73626 15 - -
41138 1.38629 1.38629 1.38629 1.38629
41139 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41140 16 0.15719 3.27118 2.73043 3.16274 16 - -
41141 1.38629 1.38629 1.38629 1.38629
41142 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41143 17 2.86982 3.47591 0.13017 3.36931 17 - -
41144 1.38629 1.38629 1.38629 1.38629
41145 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41146 18 0.15719 3.27118 2.73043 3.16274 18 - -
41147 1.38629 1.38629 1.38629 1.38629
41148 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41149 19 3.30705 0.14631 3.36166 2.73626 19 - -
41150 1.38629 1.38629 1.38629 1.38629
41151 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41152 20 2.86982 3.47591 0.13017 3.36931 20 - -
41153 1.38629 1.38629 1.38629 1.38629
41154 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41155 21 0.15719 3.27118 2.73043 3.16274 21 - -
41156 1.38629 1.38629 1.38629 1.38629
41157 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41158 22 2.86982 3.47591 0.13017 3.36931 22 - -
41159 1.38629 1.38629 1.38629 1.38629
41160 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41161 23 0.15719 3.27118 2.73043 3.16274 23 - -
41162 1.38629 1.38629 1.38629 1.38629
41163 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41164 24 3.30705 0.14631 3.36166 2.73626 24 - -
41165 1.38629 1.38629 1.38629 1.38629
41166 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41167 25 2.86982 3.47591 0.13017 3.36931 25 - -
41168 1.38629 1.38629 1.38629 1.38629
41169 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41170 26 0.15719 3.27118 2.73043 3.16274 26 - -
41171 1.38629 1.38629 1.38629 1.38629
41172 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41173 27 3.30705 0.14631 3.36166 2.73626 27 - -
41174 1.38629 1.38629 1.38629 1.38629
41175 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41176 28 3.30705 0.14631 3.36166 2.73626 28 - -
41177 1.38629 1.38629 1.38629 1.38629
41178 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41179 29 3.30705 0.14631 3.36166 2.73626 29 - -
41180 1.38629 1.38629 1.38629 1.38629
41181 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41182 30 2.86982 3.47591 0.13017 3.36931 30 - -
41183 1.38629 1.38629 1.38629 1.38629
41184 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41185 31 3.30705 0.14631 3.36166 2.73626 31 - -
41186 1.38629 1.38629 1.38629 1.38629
41187 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41188 32 2.97980 2.52563 3.03204 0.19727 32 - -
41189 1.38629 1.38629 1.38629 1.38629
41190 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41191 33 2.86982 3.47591 0.13017 3.36931 33 - -
41192 1.38629 1.38629 1.38629 1.38629
41193 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41194 34 0.15719 3.27118 2.73043 3.16274 34 - -
41195 1.38629 1.38629 1.38629 1.38629
41196 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41197 35 0.15719 3.27118 2.73043 3.16274 35 - -
41198 1.38629 1.38629 1.38629 1.38629
41199 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41200 36 2.97980 2.52563 3.03204 0.19727 36 - -
41201 1.38629 1.38629 1.38629 1.38629
41202 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41203 37 2.97980 2.52563 3.03204 0.19727 37 - -
41204 1.38629 1.38629 1.38629 1.38629
41205 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41206 38 2.97980 2.52563 3.03204 0.19727 38 - -
41207 1.38629 1.38629 1.38629 1.38629
41208 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41209 39 0.15719 3.27118 2.73043 3.16274 39 - -
41210 1.38629 1.38629 1.38629 1.38629
41211 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41212 40 0.15719 3.27118 2.73043 3.16274 40 - -
41213 1.38629 1.38629 1.38629 1.38629
41214 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41215 41 2.86982 3.47591 0.13017 3.36931 41 - -
41216 1.38629 1.38629 1.38629 1.38629
41217 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41218 42 3.30705 0.14631 3.36166 2.73626 42 - -
41219 1.38629 1.38629 1.38629 1.38629
41220 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41221 43 0.15719 3.27118 2.73043 3.16274 43 - -
41222 1.38629 1.38629 1.38629 1.38629
41223 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41224 44 2.97980 2.52563 3.03204 0.19727 44 - -
41225 1.38629 1.38629 1.38629 1.38629
41226 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41227 45 0.15719 3.27118 2.73043 3.16274 45 - -
41228 1.38629 1.38629 1.38629 1.38629
41229 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
41230 //
41231 HMMER3/b [3.0 | March 2010]
41232 NAME 4_LSU_Metazoa_4_LSU_start_forty_long
41233 LENG 45
41234 ALPH DNA
41235 RF no
41236 CS no
41237 MAP yes
41238 DATE Wed Feb 29 11:37:27 2012
41239 NSEQ 3
41240 EFFN 3.000000
41241 CKSUM 177781798
41242 STATS LOCAL MSV -7.9280 0.72034
41243 STATS LOCAL VITERBI -7.6927 0.72034
41244 STATS LOCAL FORWARD -3.8615 0.72034
41245 HMM A C G T
41246 m->m m->i m->d i->m i->i d->m d->d
41247 COMPO 1.16587 1.24219 1.44401 1.81022
41248 1.38629 1.38629 1.38629 1.38629
41249 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
41250 1 3.30705 0.14631 3.36166 2.73626 1 - -
41251 1.38629 1.38629 1.38629 1.38629
41252 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41253 2 0.15719 3.27118 2.73043 3.16274 2 - -
41254 1.38629 1.38629 1.38629 1.38629
41255 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41256 3 0.15719 3.27118 2.73043 3.16274 3 - -
41257 1.38629 1.38629 1.38629 1.38629
41258 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41259 4 3.30705 0.14631 3.36166 2.73626 4 - -
41260 1.38629 1.38629 1.38629 1.38629
41261 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41262 5 2.86982 3.47591 0.13017 3.36931 5 - -
41263 1.38629 1.38629 1.38629 1.38629
41264 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41265 6 0.15719 3.27118 2.73043 3.16274 6 - -
41266 1.38629 1.38629 1.38629 1.38629
41267 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41268 7 3.30705 0.14631 3.36166 2.73626 7 - -
41269 1.38629 1.38629 1.38629 1.38629
41270 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41271 8 3.30705 0.14631 3.36166 2.73626 8 - -
41272 1.38629 1.38629 1.38629 1.38629
41273 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41274 9 2.97980 2.52563 3.03204 0.19727 9 - -
41275 1.38629 1.38629 1.38629 1.38629
41276 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41277 10 3.30705 0.14631 3.36166 2.73626 10 - -
41278 1.38629 1.38629 1.38629 1.38629
41279 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41280 11 0.15719 3.27118 2.73043 3.16274 11 - -
41281 1.38629 1.38629 1.38629 1.38629
41282 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41283 12 2.86982 3.47591 0.13017 3.36931 12 - -
41284 1.38629 1.38629 1.38629 1.38629
41285 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41286 13 0.15719 3.27118 2.73043 3.16274 13 - -
41287 1.38629 1.38629 1.38629 1.38629
41288 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41289 14 2.86982 3.47591 0.13017 3.36931 14 - -
41290 1.38629 1.38629 1.38629 1.38629
41291 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41292 15 3.30705 0.14631 3.36166 2.73626 15 - -
41293 1.38629 1.38629 1.38629 1.38629
41294 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41295 16 0.15719 3.27118 2.73043 3.16274 16 - -
41296 1.38629 1.38629 1.38629 1.38629
41297 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41298 17 2.86982 3.47591 0.13017 3.36931 17 - -
41299 1.38629 1.38629 1.38629 1.38629
41300 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41301 18 2.86982 3.47591 0.13017 3.36931 18 - -
41302 1.38629 1.38629 1.38629 1.38629
41303 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41304 19 3.30705 0.14631 3.36166 2.73626 19 - -
41305 1.38629 1.38629 1.38629 1.38629
41306 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41307 20 2.86982 3.47591 0.13017 3.36931 20 - -
41308 1.38629 1.38629 1.38629 1.38629
41309 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41310 21 0.15719 3.27118 2.73043 3.16274 21 - -
41311 1.38629 1.38629 1.38629 1.38629
41312 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41313 22 2.86982 3.47591 0.13017 3.36931 22 - -
41314 1.38629 1.38629 1.38629 1.38629
41315 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41316 23 0.15719 3.27118 2.73043 3.16274 23 - -
41317 1.38629 1.38629 1.38629 1.38629
41318 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41319 24 3.30705 0.14631 3.36166 2.73626 24 - -
41320 1.38629 1.38629 1.38629 1.38629
41321 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41322 25 2.97980 2.52563 3.03204 0.19727 25 - -
41323 1.38629 1.38629 1.38629 1.38629
41324 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41325 26 0.15719 3.27118 2.73043 3.16274 26 - -
41326 1.38629 1.38629 1.38629 1.38629
41327 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41328 27 3.30705 0.14631 3.36166 2.73626 27 - -
41329 1.38629 1.38629 1.38629 1.38629
41330 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41331 28 3.30705 0.14631 3.36166 2.73626 28 - -
41332 1.38629 1.38629 1.38629 1.38629
41333 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41334 29 3.30705 0.14631 3.36166 2.73626 29 - -
41335 1.38629 1.38629 1.38629 1.38629
41336 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41337 30 2.86982 3.47591 0.13017 3.36931 30 - -
41338 1.38629 1.38629 1.38629 1.38629
41339 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41340 31 3.30705 0.14631 3.36166 2.73626 31 - -
41341 1.38629 1.38629 1.38629 1.38629
41342 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41343 32 2.97980 2.52563 3.03204 0.19727 32 - -
41344 1.38629 1.38629 1.38629 1.38629
41345 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41346 33 2.86982 3.47591 0.13017 3.36931 33 - -
41347 1.38629 1.38629 1.38629 1.38629
41348 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41349 34 0.15719 3.27118 2.73043 3.16274 34 - -
41350 1.38629 1.38629 1.38629 1.38629
41351 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41352 35 0.15719 3.27118 2.73043 3.16274 35 - -
41353 1.38629 1.38629 1.38629 1.38629
41354 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41355 36 2.43223 0.62271 2.50508 1.22417 36 - -
41356 1.38629 1.38629 1.38629 1.38629
41357 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41358 37 2.97980 2.52563 3.03204 0.19727 37 - -
41359 1.38629 1.38629 1.38629 1.38629
41360 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41361 38 2.97980 2.52563 3.03204 0.19727 38 - -
41362 1.38629 1.38629 1.38629 1.38629
41363 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41364 39 0.15719 3.27118 2.73043 3.16274 39 - -
41365 1.38629 1.38629 1.38629 1.38629
41366 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41367 40 0.15719 3.27118 2.73043 3.16274 40 - -
41368 1.38629 1.38629 1.38629 1.38629
41369 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41370 41 2.86982 3.47591 0.13017 3.36931 41 - -
41371 1.38629 1.38629 1.38629 1.38629
41372 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41373 42 3.30705 0.14631 3.36166 2.73626 42 - -
41374 1.38629 1.38629 1.38629 1.38629
41375 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41376 43 0.15719 3.27118 2.73043 3.16274 43 - -
41377 1.38629 1.38629 1.38629 1.38629
41378 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41379 44 2.97980 2.52563 3.03204 0.19727 44 - -
41380 1.38629 1.38629 1.38629 1.38629
41381 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41382 45 0.15719 3.27118 2.73043 3.16274 45 - -
41383 1.38629 1.38629 1.38629 1.38629
41384 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
41385 //
41386 HMMER3/b [3.0 | March 2010]
41387 NAME 4_LSU_Metazoa_4_LSU_start_fortyeight_long
41388 LENG 45
41389 ALPH DNA
41390 RF no
41391 CS no
41392 MAP yes
41393 DATE Wed Feb 29 11:39:23 2012
41394 NSEQ 2
41395 EFFN 2.000000
41396 CKSUM 3833065457
41397 STATS LOCAL MSV -7.5228 0.72841
41398 STATS LOCAL VITERBI -8.1928 0.72841
41399 STATS LOCAL FORWARD -3.5857 0.72841
41400 HMM A C G T
41401 m->m m->i m->d i->m i->i d->m d->d
41402 COMPO 1.26812 1.40241 1.36693 1.52443
41403 1.38629 1.38629 1.38629 1.38629
41404 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
41405 1 1.03732 1.95876 1.96551 1.00928 1 - -
41406 1.38629 1.38629 1.38629 1.38629
41407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41408 2 2.57915 2.25909 2.64442 0.28946 2 - -
41409 1.38629 1.38629 1.38629 1.38629
41410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41411 3 0.23862 2.84929 2.43386 2.70756 3 - -
41412 1.38629 1.38629 1.38629 1.38629
41413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41414 4 2.81865 0.23582 2.88868 2.35662 4 - -
41415 1.38629 1.38629 1.38629 1.38629
41416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41417 5 2.53331 3.02441 0.20344 2.88069 5 - -
41418 1.38629 1.38629 1.38629 1.38629
41419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41420 6 0.23862 2.84929 2.43386 2.70756 6 - -
41421 1.38629 1.38629 1.38629 1.38629
41422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41423 7 2.81865 0.23582 2.88868 2.35662 7 - -
41424 1.38629 1.38629 1.38629 1.38629
41425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41426 8 2.81865 0.23582 2.88868 2.35662 8 - -
41427 1.38629 1.38629 1.38629 1.38629
41428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41429 9 2.57915 2.25909 2.64442 0.28946 9 - -
41430 1.38629 1.38629 1.38629 1.38629
41431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41432 10 2.53331 3.02441 0.20344 2.88069 10 - -
41433 1.38629 1.38629 1.38629 1.38629
41434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41435 11 0.23862 2.84929 2.43386 2.70756 11 - -
41436 1.38629 1.38629 1.38629 1.38629
41437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41438 12 2.53331 3.02441 0.20344 2.88069 12 - -
41439 1.38629 1.38629 1.38629 1.38629
41440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41441 13 2.57915 2.25909 2.64442 0.28946 13 - -
41442 1.38629 1.38629 1.38629 1.38629
41443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41444 14 2.57915 2.25909 2.64442 0.28946 14 - -
41445 1.38629 1.38629 1.38629 1.38629
41446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41447 15 2.81865 0.23582 2.88868 2.35662 15 - -
41448 1.38629 1.38629 1.38629 1.38629
41449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41450 16 0.23862 2.84929 2.43386 2.70756 16 - -
41451 1.38629 1.38629 1.38629 1.38629
41452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41453 17 2.53331 3.02441 0.20344 2.88069 17 - -
41454 1.38629 1.38629 1.38629 1.38629
41455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41456 18 2.53331 3.02441 0.20344 2.88069 18 - -
41457 1.38629 1.38629 1.38629 1.38629
41458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41459 19 2.81865 0.23582 2.88868 2.35662 19 - -
41460 1.38629 1.38629 1.38629 1.38629
41461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41462 20 2.53331 3.02441 0.20344 2.88069 20 - -
41463 1.38629 1.38629 1.38629 1.38629
41464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41465 21 0.23862 2.84929 2.43386 2.70756 21 - -
41466 1.38629 1.38629 1.38629 1.38629
41467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41468 22 2.53331 3.02441 0.20344 2.88069 22 - -
41469 1.38629 1.38629 1.38629 1.38629
41470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41471 23 0.23862 2.84929 2.43386 2.70756 23 - -
41472 1.38629 1.38629 1.38629 1.38629
41473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41474 24 2.53331 3.02441 0.20344 2.88069 24 - -
41475 1.38629 1.38629 1.38629 1.38629
41476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41477 25 2.81865 0.23582 2.88868 2.35662 25 - -
41478 1.38629 1.38629 1.38629 1.38629
41479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41480 26 0.23862 2.84929 2.43386 2.70756 26 - -
41481 1.38629 1.38629 1.38629 1.38629
41482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41483 27 2.81865 0.23582 2.88868 2.35662 27 - -
41484 1.38629 1.38629 1.38629 1.38629
41485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41486 28 2.81865 0.23582 2.88868 2.35662 28 - -
41487 1.38629 1.38629 1.38629 1.38629
41488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41489 29 2.81865 0.23582 2.88868 2.35662 29 - -
41490 1.38629 1.38629 1.38629 1.38629
41491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41492 30 2.53331 3.02441 0.20344 2.88069 30 - -
41493 1.38629 1.38629 1.38629 1.38629
41494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41495 31 2.81865 0.23582 2.88868 2.35662 31 - -
41496 1.38629 1.38629 1.38629 1.38629
41497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41498 32 2.57915 2.25909 2.64442 0.28946 32 - -
41499 1.38629 1.38629 1.38629 1.38629
41500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41501 33 2.53331 3.02441 0.20344 2.88069 33 - -
41502 1.38629 1.38629 1.38629 1.38629
41503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41504 34 0.23862 2.84929 2.43386 2.70756 34 - -
41505 1.38629 1.38629 1.38629 1.38629
41506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41507 35 0.23862 2.84929 2.43386 2.70756 35 - -
41508 1.38629 1.38629 1.38629 1.38629
41509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41510 36 2.57915 2.25909 2.64442 0.28946 36 - -
41511 1.38629 1.38629 1.38629 1.38629
41512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41513 37 2.57915 2.25909 2.64442 0.28946 37 - -
41514 1.38629 1.38629 1.38629 1.38629
41515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41516 38 2.57915 2.25909 2.64442 0.28946 38 - -
41517 1.38629 1.38629 1.38629 1.38629
41518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41519 39 0.23862 2.84929 2.43386 2.70756 39 - -
41520 1.38629 1.38629 1.38629 1.38629
41521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41522 40 0.23862 2.84929 2.43386 2.70756 40 - -
41523 1.38629 1.38629 1.38629 1.38629
41524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41525 41 2.53331 3.02441 0.20344 2.88069 41 - -
41526 1.38629 1.38629 1.38629 1.38629
41527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41528 42 2.81865 0.23582 2.88868 2.35662 42 - -
41529 1.38629 1.38629 1.38629 1.38629
41530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41531 43 0.23862 2.84929 2.43386 2.70756 43 - -
41532 1.38629 1.38629 1.38629 1.38629
41533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41534 44 2.57915 2.25909 2.64442 0.28946 44 - -
41535 1.38629 1.38629 1.38629 1.38629
41536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41537 45 0.23862 2.84929 2.43386 2.70756 45 - -
41538 1.38629 1.38629 1.38629 1.38629
41539 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
41540 //
41541 HMMER3/b [3.0 | March 2010]
41542 NAME 4_LSU_Metazoa_4_LSU_start_fortyfive_long
41543 LENG 45
41544 ALPH DNA
41545 RF no
41546 CS no
41547 MAP yes
41548 DATE Wed Feb 29 11:38:52 2012
41549 NSEQ 3
41550 EFFN 3.000000
41551 CKSUM 1191930638
41552 STATS LOCAL MSV -8.2239 0.72118
41553 STATS LOCAL VITERBI -7.7053 0.72118
41554 STATS LOCAL FORWARD -4.0150 0.72118
41555 HMM A C G T
41556 m->m m->i m->d i->m i->i d->m d->d
41557 COMPO 1.13466 1.28437 1.57340 1.63832
41558 1.38629 1.38629 1.38629 1.38629
41559 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
41560 1 2.11048 0.71234 1.38751 1.97595 1 - -
41561 1.38629 1.38629 1.38629 1.38629
41562 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41563 2 2.97980 2.52563 3.03204 0.19727 2 - -
41564 1.38629 1.38629 1.38629 1.38629
41565 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41566 3 0.15719 3.27118 2.73043 3.16274 3 - -
41567 1.38629 1.38629 1.38629 1.38629
41568 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41569 4 3.30705 0.14631 3.36166 2.73626 4 - -
41570 1.38629 1.38629 1.38629 1.38629
41571 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41572 5 2.86982 3.47591 0.13017 3.36931 5 - -
41573 1.38629 1.38629 1.38629 1.38629
41574 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41575 6 0.15719 3.27118 2.73043 3.16274 6 - -
41576 1.38629 1.38629 1.38629 1.38629
41577 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41578 7 3.30705 0.14631 3.36166 2.73626 7 - -
41579 1.38629 1.38629 1.38629 1.38629
41580 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41581 8 3.30705 0.14631 3.36166 2.73626 8 - -
41582 1.38629 1.38629 1.38629 1.38629
41583 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41584 9 2.97980 2.52563 3.03204 0.19727 9 - -
41585 1.38629 1.38629 1.38629 1.38629
41586 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41587 10 3.30705 0.14631 3.36166 2.73626 10 - -
41588 1.38629 1.38629 1.38629 1.38629
41589 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41590 11 0.15719 3.27118 2.73043 3.16274 11 - -
41591 1.38629 1.38629 1.38629 1.38629
41592 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41593 12 2.86982 3.47591 0.13017 3.36931 12 - -
41594 1.38629 1.38629 1.38629 1.38629
41595 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41596 13 0.15719 3.27118 2.73043 3.16274 13 - -
41597 1.38629 1.38629 1.38629 1.38629
41598 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41599 14 2.97980 2.52563 3.03204 0.19727 14 - -
41600 1.38629 1.38629 1.38629 1.38629
41601 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41602 15 3.30705 0.14631 3.36166 2.73626 15 - -
41603 1.38629 1.38629 1.38629 1.38629
41604 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41605 16 0.15719 3.27118 2.73043 3.16274 16 - -
41606 1.38629 1.38629 1.38629 1.38629
41607 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41608 17 2.86982 3.47591 0.13017 3.36931 17 - -
41609 1.38629 1.38629 1.38629 1.38629
41610 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41611 18 0.15719 3.27118 2.73043 3.16274 18 - -
41612 1.38629 1.38629 1.38629 1.38629
41613 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41614 19 3.30705 0.14631 3.36166 2.73626 19 - -
41615 1.38629 1.38629 1.38629 1.38629
41616 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41617 20 2.86982 3.47591 0.13017 3.36931 20 - -
41618 1.38629 1.38629 1.38629 1.38629
41619 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41620 21 0.15719 3.27118 2.73043 3.16274 21 - -
41621 1.38629 1.38629 1.38629 1.38629
41622 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41623 22 2.86982 3.47591 0.13017 3.36931 22 - -
41624 1.38629 1.38629 1.38629 1.38629
41625 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41626 23 0.66361 1.42357 2.15007 2.05820 23 - -
41627 1.38629 1.38629 1.38629 1.38629
41628 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41629 24 3.30705 0.14631 3.36166 2.73626 24 - -
41630 1.38629 1.38629 1.38629 1.38629
41631 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41632 25 0.15719 3.27118 2.73043 3.16274 25 - -
41633 1.38629 1.38629 1.38629 1.38629
41634 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41635 26 0.15719 3.27118 2.73043 3.16274 26 - -
41636 1.38629 1.38629 1.38629 1.38629
41637 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41638 27 3.30705 0.14631 3.36166 2.73626 27 - -
41639 1.38629 1.38629 1.38629 1.38629
41640 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41641 28 3.30705 0.14631 3.36166 2.73626 28 - -
41642 1.38629 1.38629 1.38629 1.38629
41643 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41644 29 3.30705 0.14631 3.36166 2.73626 29 - -
41645 1.38629 1.38629 1.38629 1.38629
41646 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41647 30 2.86982 3.47591 0.13017 3.36931 30 - -
41648 1.38629 1.38629 1.38629 1.38629
41649 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41650 31 3.30705 0.14631 3.36166 2.73626 31 - -
41651 1.38629 1.38629 1.38629 1.38629
41652 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41653 32 2.97980 2.52563 3.03204 0.19727 32 - -
41654 1.38629 1.38629 1.38629 1.38629
41655 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41656 33 2.86982 3.47591 0.13017 3.36931 33 - -
41657 1.38629 1.38629 1.38629 1.38629
41658 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41659 34 0.15719 3.27118 2.73043 3.16274 34 - -
41660 1.38629 1.38629 1.38629 1.38629
41661 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41662 35 0.15719 3.27118 2.73043 3.16274 35 - -
41663 1.38629 1.38629 1.38629 1.38629
41664 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41665 36 2.97980 2.52563 3.03204 0.19727 36 - -
41666 1.38629 1.38629 1.38629 1.38629
41667 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41668 37 2.97980 2.52563 3.03204 0.19727 37 - -
41669 1.38629 1.38629 1.38629 1.38629
41670 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41671 38 2.97980 2.52563 3.03204 0.19727 38 - -
41672 1.38629 1.38629 1.38629 1.38629
41673 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41674 39 0.15719 3.27118 2.73043 3.16274 39 - -
41675 1.38629 1.38629 1.38629 1.38629
41676 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41677 40 0.15719 3.27118 2.73043 3.16274 40 - -
41678 1.38629 1.38629 1.38629 1.38629
41679 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41680 41 2.86982 3.47591 0.13017 3.36931 41 - -
41681 1.38629 1.38629 1.38629 1.38629
41682 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41683 42 3.30705 0.14631 3.36166 2.73626 42 - -
41684 1.38629 1.38629 1.38629 1.38629
41685 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41686 43 0.15719 3.27118 2.73043 3.16274 43 - -
41687 1.38629 1.38629 1.38629 1.38629
41688 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41689 44 2.97980 2.52563 3.03204 0.19727 44 - -
41690 1.38629 1.38629 1.38629 1.38629
41691 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
41692 45 0.15719 3.27118 2.73043 3.16274 45 - -
41693 1.38629 1.38629 1.38629 1.38629
41694 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
41695 //
41696 HMMER3/b [3.0 | March 2010]
41697 NAME 4_LSU_Metazoa_4_LSU_start_fortyfoura_long
41698 LENG 45
41699 ALPH DNA
41700 RF no
41701 CS no
41702 MAP yes
41703 DATE Wed Feb 29 11:38:28 2012
41704 NSEQ 5
41705 EFFN 3.413086
41706 CKSUM 1013805944
41707 STATS LOCAL MSV -7.6463 0.71933
41708 STATS LOCAL VITERBI -7.8316 0.71933
41709 STATS LOCAL FORWARD -4.0407 0.71933
41710 HMM A C G T
41711 m->m m->i m->d i->m i->i d->m d->d
41712 COMPO 1.28408 1.29592 1.36697 1.63695
41713 1.38629 1.38629 1.38629 1.38629
41714 0.03628 4.02769 4.02769 1.46634 0.26236 0.00000 *
41715 1 0.34579 2.85483 1.77608 2.72608 1 - -
41716 1.38629 1.38629 1.38629 1.38629
41717 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41718 2 2.73556 0.38295 2.80366 1.64658 2 - -
41719 1.38629 1.38629 1.38629 1.38629
41720 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41721 3 2.96731 3.61661 0.11405 3.52429 3 - -
41722 1.38629 1.38629 1.38629 1.38629
41723 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41724 4 3.46593 0.12636 3.51399 2.85283 4 - -
41725 1.38629 1.38629 1.38629 1.38629
41726 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41727 5 2.96731 3.61661 0.11405 3.52429 5 - -
41728 1.38629 1.38629 1.38629 1.38629
41729 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41730 6 0.13819 3.40877 2.82041 3.31315 6 - -
41731 1.38629 1.38629 1.38629 1.38629
41732 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41733 7 3.46593 0.12636 3.51399 2.85283 7 - -
41734 1.38629 1.38629 1.38629 1.38629
41735 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41736 8 3.46593 0.12636 3.51399 2.85283 8 - -
41737 1.38629 1.38629 1.38629 1.38629
41738 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41739 9 3.11748 2.61349 3.16453 0.17409 9 - -
41740 1.38629 1.38629 1.38629 1.38629
41741 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41742 10 3.46593 0.12636 3.51399 2.85283 10 - -
41743 1.38629 1.38629 1.38629 1.38629
41744 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41745 11 0.13819 3.40877 2.82041 3.31315 11 - -
41746 1.38629 1.38629 1.38629 1.38629
41747 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41748 12 2.96731 3.61661 0.11405 3.52429 12 - -
41749 1.38629 1.38629 1.38629 1.38629
41750 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41751 13 0.13819 3.40877 2.82041 3.31315 13 - -
41752 1.38629 1.38629 1.38629 1.38629
41753 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41754 14 3.11748 2.61349 3.16453 0.17409 14 - -
41755 1.38629 1.38629 1.38629 1.38629
41756 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41757 15 3.46593 0.12636 3.51399 2.85283 15 - -
41758 1.38629 1.38629 1.38629 1.38629
41759 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41760 16 0.13819 3.40877 2.82041 3.31315 16 - -
41761 1.38629 1.38629 1.38629 1.38629
41762 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41763 17 2.96731 3.61661 0.11405 3.52429 17 - -
41764 1.38629 1.38629 1.38629 1.38629
41765 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41766 18 0.13819 3.40877 2.82041 3.31315 18 - -
41767 1.38629 1.38629 1.38629 1.38629
41768 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41769 19 3.46593 0.12636 3.51399 2.85283 19 - -
41770 1.38629 1.38629 1.38629 1.38629
41771 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41772 20 2.96731 3.61661 0.11405 3.52429 20 - -
41773 1.38629 1.38629 1.38629 1.38629
41774 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41775 21 3.11748 2.61349 3.16453 0.17409 21 - -
41776 1.38629 1.38629 1.38629 1.38629
41777 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41778 22 2.96731 3.61661 0.11405 3.52429 22 - -
41779 1.38629 1.38629 1.38629 1.38629
41780 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41781 23 2.96731 3.61661 0.11405 3.52429 23 - -
41782 1.38629 1.38629 1.38629 1.38629
41783 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41784 24 2.73556 0.38295 2.80366 1.64658 24 - -
41785 1.38629 1.38629 1.38629 1.38629
41786 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41787 25 2.96731 3.61661 0.11405 3.52429 25 - -
41788 1.38629 1.38629 1.38629 1.38629
41789 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41790 26 0.13819 3.40877 2.82041 3.31315 26 - -
41791 1.38629 1.38629 1.38629 1.38629
41792 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41793 27 3.46593 0.12636 3.51399 2.85283 27 - -
41794 1.38629 1.38629 1.38629 1.38629
41795 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41796 28 3.46593 0.12636 3.51399 2.85283 28 - -
41797 1.38629 1.38629 1.38629 1.38629
41798 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41799 29 3.46593 0.12636 3.51399 2.85283 29 - -
41800 1.38629 1.38629 1.38629 1.38629
41801 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41802 30 2.96731 3.61661 0.11405 3.52429 30 - -
41803 1.38629 1.38629 1.38629 1.38629
41804 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41805 31 3.46593 0.12636 3.51399 2.85283 31 - -
41806 1.38629 1.38629 1.38629 1.38629
41807 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41808 32 3.11748 2.61349 3.16453 0.17409 32 - -
41809 1.38629 1.38629 1.38629 1.38629
41810 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41811 33 2.96731 3.61661 0.11405 3.52429 33 - -
41812 1.38629 1.38629 1.38629 1.38629
41813 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41814 34 0.13819 3.40877 2.82041 3.31315 34 - -
41815 1.38629 1.38629 1.38629 1.38629
41816 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41817 35 0.13819 3.40877 2.82041 3.31315 35 - -
41818 1.38629 1.38629 1.38629 1.38629
41819 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41820 36 3.11748 2.61349 3.16453 0.17409 36 - -
41821 1.38629 1.38629 1.38629 1.38629
41822 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41823 37 3.11748 2.61349 3.16453 0.17409 37 - -
41824 1.38629 1.38629 1.38629 1.38629
41825 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41826 38 3.11748 2.61349 3.16453 0.17409 38 - -
41827 1.38629 1.38629 1.38629 1.38629
41828 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41829 39 0.13819 3.40877 2.82041 3.31315 39 - -
41830 1.38629 1.38629 1.38629 1.38629
41831 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41832 40 0.13819 3.40877 2.82041 3.31315 40 - -
41833 1.38629 1.38629 1.38629 1.38629
41834 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41835 41 2.96731 3.61661 0.11405 3.52429 41 - -
41836 1.38629 1.38629 1.38629 1.38629
41837 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41838 42 3.46593 0.12636 3.51399 2.85283 42 - -
41839 1.38629 1.38629 1.38629 1.38629
41840 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41841 43 0.13819 3.40877 2.82041 3.31315 43 - -
41842 1.38629 1.38629 1.38629 1.38629
41843 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41844 44 3.11748 2.61349 3.16453 0.17409 44 - -
41845 1.38629 1.38629 1.38629 1.38629
41846 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
41847 45 0.13819 3.40877 2.82041 3.31315 45 - -
41848 1.38629 1.38629 1.38629 1.38629
41849 0.01831 4.00971 * 1.46634 0.26236 0.00000 *
41850 //
41851 HMMER3/b [3.0 | March 2010]
41852 NAME 4_LSU_Metazoa_4_LSU_start_fortyfourb_long
41853 LENG 45
41854 ALPH DNA
41855 RF no
41856 CS no
41857 MAP yes
41858 DATE Wed Feb 29 11:38:39 2012
41859 NSEQ 2
41860 EFFN 2.000000
41861 CKSUM 1268375051
41862 STATS LOCAL MSV -7.6474 0.72924
41863 STATS LOCAL VITERBI -8.4367 0.72924
41864 STATS LOCAL FORWARD -3.2953 0.72924
41865 HMM A C G T
41866 m->m m->i m->d i->m i->i d->m d->d
41867 COMPO 1.30102 1.30681 1.42415 1.53087
41868 1.38629 1.38629 1.38629 1.38629
41869 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
41870 1 2.81865 0.23582 2.88868 2.35662 1 - -
41871 1.38629 1.38629 1.38629 1.38629
41872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41873 2 2.57915 2.25909 2.64442 0.28946 2 - -
41874 1.38629 1.38629 1.38629 1.38629
41875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41876 3 1.01448 1.11006 1.95471 1.79419 3 - -
41877 1.38629 1.38629 1.38629 1.38629
41878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41879 4 1.01448 1.11006 1.95471 1.79419 4 - -
41880 1.38629 1.38629 1.38629 1.38629
41881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41882 5 2.53331 3.02441 0.20344 2.88069 5 - -
41883 1.38629 1.38629 1.38629 1.38629
41884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41885 6 0.23862 2.84929 2.43386 2.70756 6 - -
41886 1.38629 1.38629 1.38629 1.38629
41887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41888 7 2.81865 0.23582 2.88868 2.35662 7 - -
41889 1.38629 1.38629 1.38629 1.38629
41890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41891 8 2.81865 0.23582 2.88868 2.35662 8 - -
41892 1.38629 1.38629 1.38629 1.38629
41893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41894 9 2.57915 2.25909 2.64442 0.28946 9 - -
41895 1.38629 1.38629 1.38629 1.38629
41896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41897 10 2.81865 0.23582 2.88868 2.35662 10 - -
41898 1.38629 1.38629 1.38629 1.38629
41899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41900 11 0.23862 2.84929 2.43386 2.70756 11 - -
41901 1.38629 1.38629 1.38629 1.38629
41902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41903 12 2.53331 3.02441 0.20344 2.88069 12 - -
41904 1.38629 1.38629 1.38629 1.38629
41905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41906 13 0.23862 2.84929 2.43386 2.70756 13 - -
41907 1.38629 1.38629 1.38629 1.38629
41908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41909 14 2.57915 2.25909 2.64442 0.28946 14 - -
41910 1.38629 1.38629 1.38629 1.38629
41911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41912 15 2.81865 0.23582 2.88868 2.35662 15 - -
41913 1.38629 1.38629 1.38629 1.38629
41914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41915 16 0.23862 2.84929 2.43386 2.70756 16 - -
41916 1.38629 1.38629 1.38629 1.38629
41917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41918 17 2.53331 3.02441 0.20344 2.88069 17 - -
41919 1.38629 1.38629 1.38629 1.38629
41920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41921 18 0.23862 2.84929 2.43386 2.70756 18 - -
41922 1.38629 1.38629 1.38629 1.38629
41923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41924 19 2.81865 0.23582 2.88868 2.35662 19 - -
41925 1.38629 1.38629 1.38629 1.38629
41926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41927 20 2.53331 3.02441 0.20344 2.88069 20 - -
41928 1.38629 1.38629 1.38629 1.38629
41929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41930 21 2.57915 2.25909 2.64442 0.28946 21 - -
41931 1.38629 1.38629 1.38629 1.38629
41932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41933 22 2.53331 3.02441 0.20344 2.88069 22 - -
41934 1.38629 1.38629 1.38629 1.38629
41935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41936 23 2.53331 3.02441 0.20344 2.88069 23 - -
41937 1.38629 1.38629 1.38629 1.38629
41938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41939 24 2.81865 0.23582 2.88868 2.35662 24 - -
41940 1.38629 1.38629 1.38629 1.38629
41941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41942 25 2.53331 3.02441 0.20344 2.88069 25 - -
41943 1.38629 1.38629 1.38629 1.38629
41944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41945 26 0.23862 2.84929 2.43386 2.70756 26 - -
41946 1.38629 1.38629 1.38629 1.38629
41947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41948 27 2.81865 0.23582 2.88868 2.35662 27 - -
41949 1.38629 1.38629 1.38629 1.38629
41950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41951 28 2.81865 0.23582 2.88868 2.35662 28 - -
41952 1.38629 1.38629 1.38629 1.38629
41953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41954 29 2.81865 0.23582 2.88868 2.35662 29 - -
41955 1.38629 1.38629 1.38629 1.38629
41956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41957 30 2.53331 3.02441 0.20344 2.88069 30 - -
41958 1.38629 1.38629 1.38629 1.38629
41959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41960 31 2.81865 0.23582 2.88868 2.35662 31 - -
41961 1.38629 1.38629 1.38629 1.38629
41962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41963 32 2.57915 2.25909 2.64442 0.28946 32 - -
41964 1.38629 1.38629 1.38629 1.38629
41965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41966 33 2.53331 3.02441 0.20344 2.88069 33 - -
41967 1.38629 1.38629 1.38629 1.38629
41968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41969 34 0.23862 2.84929 2.43386 2.70756 34 - -
41970 1.38629 1.38629 1.38629 1.38629
41971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41972 35 0.23862 2.84929 2.43386 2.70756 35 - -
41973 1.38629 1.38629 1.38629 1.38629
41974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41975 36 2.57915 2.25909 2.64442 0.28946 36 - -
41976 1.38629 1.38629 1.38629 1.38629
41977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41978 37 2.57915 2.25909 2.64442 0.28946 37 - -
41979 1.38629 1.38629 1.38629 1.38629
41980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41981 38 2.57915 2.25909 2.64442 0.28946 38 - -
41982 1.38629 1.38629 1.38629 1.38629
41983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41984 39 0.23862 2.84929 2.43386 2.70756 39 - -
41985 1.38629 1.38629 1.38629 1.38629
41986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41987 40 0.23862 2.84929 2.43386 2.70756 40 - -
41988 1.38629 1.38629 1.38629 1.38629
41989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41990 41 2.53331 3.02441 0.20344 2.88069 41 - -
41991 1.38629 1.38629 1.38629 1.38629
41992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41993 42 2.81865 0.23582 2.88868 2.35662 42 - -
41994 1.38629 1.38629 1.38629 1.38629
41995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41996 43 0.23862 2.84929 2.43386 2.70756 43 - -
41997 1.38629 1.38629 1.38629 1.38629
41998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
41999 44 2.57915 2.25909 2.64442 0.28946 44 - -
42000 1.38629 1.38629 1.38629 1.38629
42001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42002 45 0.23862 2.84929 2.43386 2.70756 45 - -
42003 1.38629 1.38629 1.38629 1.38629
42004 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
42005 //
42006 HMMER3/b [3.0 | March 2010]
42007 NAME 4_LSU_Metazoa_4_LSU_start_fortynine_long
42008 LENG 45
42009 ALPH DNA
42010 RF no
42011 CS no
42012 MAP yes
42013 DATE Wed Feb 29 11:39:33 2012
42014 NSEQ 4
42015 EFFN 3.339844
42016 CKSUM 2409178545
42017 STATS LOCAL MSV -8.1050 0.71932
42018 STATS LOCAL VITERBI -7.6212 0.71932
42019 STATS LOCAL FORWARD -4.1599 0.71932
42020 HMM A C G T
42021 m->m m->i m->d i->m i->i d->m d->d
42022 COMPO 1.25227 1.39140 1.37276 1.55112
42023 1.38629 1.38629 1.38629 1.38629
42024 0.03677 4.01455 4.01455 1.46634 0.26236 0.00000 *
42025 1 0.97435 2.14484 2.16029 0.94114 1 - -
42026 1.38629 1.38629 1.38629 1.38629
42027 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42028 2 3.09414 2.59866 3.14209 0.17779 2 - -
42029 1.38629 1.38629 1.38629 1.38629
42030 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42031 3 2.95135 3.59331 0.11655 3.49856 3 - -
42032 1.38629 1.38629 1.38629 1.38629
42033 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42034 4 3.43942 0.12946 3.48861 2.83359 4 - -
42035 1.38629 1.38629 1.38629 1.38629
42036 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42037 5 2.95135 3.59331 0.11655 3.49856 5 - -
42038 1.38629 1.38629 1.38629 1.38629
42039 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42040 6 0.14117 3.38574 2.80548 3.28793 6 - -
42041 1.38629 1.38629 1.38629 1.38629
42042 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42043 7 3.43942 0.12946 3.48861 2.83359 7 - -
42044 1.38629 1.38629 1.38629 1.38629
42045 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42046 8 3.43942 0.12946 3.48861 2.83359 8 - -
42047 1.38629 1.38629 1.38629 1.38629
42048 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42049 9 3.09414 2.59866 3.14209 0.17779 9 - -
42050 1.38629 1.38629 1.38629 1.38629
42051 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42052 10 3.43942 0.12946 3.48861 2.83359 10 - -
42053 1.38629 1.38629 1.38629 1.38629
42054 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42055 11 0.14117 3.38574 2.80548 3.28793 11 - -
42056 1.38629 1.38629 1.38629 1.38629
42057 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42058 12 2.95135 3.59331 0.11655 3.49856 12 - -
42059 1.38629 1.38629 1.38629 1.38629
42060 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42061 13 0.14117 3.38574 2.80548 3.28793 13 - -
42062 1.38629 1.38629 1.38629 1.38629
42063 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42064 14 2.95135 3.59331 0.11655 3.49856 14 - -
42065 1.38629 1.38629 1.38629 1.38629
42066 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42067 15 3.43942 0.12946 3.48861 2.83359 15 - -
42068 1.38629 1.38629 1.38629 1.38629
42069 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42070 16 0.14117 3.38574 2.80548 3.28793 16 - -
42071 1.38629 1.38629 1.38629 1.38629
42072 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42073 17 2.95135 3.59331 0.11655 3.49856 17 - -
42074 1.38629 1.38629 1.38629 1.38629
42075 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42076 18 2.95135 3.59331 0.11655 3.49856 18 - -
42077 1.38629 1.38629 1.38629 1.38629
42078 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42079 19 3.09414 2.59866 3.14209 0.17779 19 - -
42080 1.38629 1.38629 1.38629 1.38629
42081 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42082 20 2.95135 3.59331 0.11655 3.49856 20 - -
42083 1.38629 1.38629 1.38629 1.38629
42084 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42085 21 0.14117 3.38574 2.80548 3.28793 21 - -
42086 1.38629 1.38629 1.38629 1.38629
42087 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42088 22 2.95135 3.59331 0.11655 3.49856 22 - -
42089 1.38629 1.38629 1.38629 1.38629
42090 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42091 23 0.14117 3.38574 2.80548 3.28793 23 - -
42092 1.38629 1.38629 1.38629 1.38629
42093 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42094 24 3.43942 0.12946 3.48861 2.83359 24 - -
42095 1.38629 1.38629 1.38629 1.38629
42096 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42097 25 3.09414 2.59866 3.14209 0.17779 25 - -
42098 1.38629 1.38629 1.38629 1.38629
42099 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42100 26 0.14117 3.38574 2.80548 3.28793 26 - -
42101 1.38629 1.38629 1.38629 1.38629
42102 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42103 27 3.43942 0.12946 3.48861 2.83359 27 - -
42104 1.38629 1.38629 1.38629 1.38629
42105 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42106 28 3.43942 0.12946 3.48861 2.83359 28 - -
42107 1.38629 1.38629 1.38629 1.38629
42108 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42109 29 3.43942 0.12946 3.48861 2.83359 29 - -
42110 1.38629 1.38629 1.38629 1.38629
42111 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42112 30 2.95135 3.59331 0.11655 3.49856 30 - -
42113 1.38629 1.38629 1.38629 1.38629
42114 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42115 31 3.43942 0.12946 3.48861 2.83359 31 - -
42116 1.38629 1.38629 1.38629 1.38629
42117 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42118 32 3.09414 2.59866 3.14209 0.17779 32 - -
42119 1.38629 1.38629 1.38629 1.38629
42120 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42121 33 2.95135 3.59331 0.11655 3.49856 33 - -
42122 1.38629 1.38629 1.38629 1.38629
42123 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42124 34 0.14117 3.38574 2.80548 3.28793 34 - -
42125 1.38629 1.38629 1.38629 1.38629
42126 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42127 35 0.14117 3.38574 2.80548 3.28793 35 - -
42128 1.38629 1.38629 1.38629 1.38629
42129 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42130 36 3.09414 2.59866 3.14209 0.17779 36 - -
42131 1.38629 1.38629 1.38629 1.38629
42132 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42133 37 3.09414 2.59866 3.14209 0.17779 37 - -
42134 1.38629 1.38629 1.38629 1.38629
42135 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42136 38 3.09414 2.59866 3.14209 0.17779 38 - -
42137 1.38629 1.38629 1.38629 1.38629
42138 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42139 39 0.14117 3.38574 2.80548 3.28793 39 - -
42140 1.38629 1.38629 1.38629 1.38629
42141 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42142 40 0.14117 3.38574 2.80548 3.28793 40 - -
42143 1.38629 1.38629 1.38629 1.38629
42144 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42145 41 2.95135 3.59331 0.11655 3.49856 41 - -
42146 1.38629 1.38629 1.38629 1.38629
42147 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42148 42 3.43942 0.12946 3.48861 2.83359 42 - -
42149 1.38629 1.38629 1.38629 1.38629
42150 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42151 43 0.14117 3.38574 2.80548 3.28793 43 - -
42152 1.38629 1.38629 1.38629 1.38629
42153 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42154 44 3.09414 2.59866 3.14209 0.17779 44 - -
42155 1.38629 1.38629 1.38629 1.38629
42156 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
42157 45 0.14117 3.38574 2.80548 3.28793 45 - -
42158 1.38629 1.38629 1.38629 1.38629
42159 0.01855 3.99634 * 1.46634 0.26236 0.00000 *
42160 //
42161 HMMER3/b [3.0 | March 2010]
42162 NAME 4_LSU_Metazoa_4_LSU_start_fortyonea_long
42163 LENG 45
42164 ALPH DNA
42165 RF no
42166 CS no
42167 MAP yes
42168 DATE Wed Feb 29 11:37:39 2012
42169 NSEQ 3
42170 EFFN 3.000000
42171 CKSUM 3366742742
42172 STATS LOCAL MSV -8.0336 0.72055
42173 STATS LOCAL VITERBI -7.7232 0.72055
42174 STATS LOCAL FORWARD -4.1900 0.72055
42175 HMM A C G T
42176 m->m m->i m->d i->m i->i d->m d->d
42177 COMPO 1.30370 1.20720 1.50925 1.56846
42178 1.38629 1.38629 1.38629 1.38629
42179 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
42180 1 2.97980 2.52563 3.03204 0.19727 1 - -
42181 1.38629 1.38629 1.38629 1.38629
42182 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42183 2 3.30705 0.14631 3.36166 2.73626 2 - -
42184 1.38629 1.38629 1.38629 1.38629
42185 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42186 3 3.30705 0.14631 3.36166 2.73626 3 - -
42187 1.38629 1.38629 1.38629 1.38629
42188 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42189 4 3.30705 0.14631 3.36166 2.73626 4 - -
42190 1.38629 1.38629 1.38629 1.38629
42191 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42192 5 0.15719 3.27118 2.73043 3.16274 5 - -
42193 1.38629 1.38629 1.38629 1.38629
42194 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42195 6 0.15719 3.27118 2.73043 3.16274 6 - -
42196 1.38629 1.38629 1.38629 1.38629
42197 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42198 7 3.30705 0.14631 3.36166 2.73626 7 - -
42199 1.38629 1.38629 1.38629 1.38629
42200 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42201 8 3.30705 0.14631 3.36166 2.73626 8 - -
42202 1.38629 1.38629 1.38629 1.38629
42203 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42204 9 2.97980 2.52563 3.03204 0.19727 9 - -
42205 1.38629 1.38629 1.38629 1.38629
42206 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42207 10 3.30705 0.14631 3.36166 2.73626 10 - -
42208 1.38629 1.38629 1.38629 1.38629
42209 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42210 11 2.86982 3.47591 0.13017 3.36931 11 - -
42211 1.38629 1.38629 1.38629 1.38629
42212 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42213 12 2.86982 3.47591 0.13017 3.36931 12 - -
42214 1.38629 1.38629 1.38629 1.38629
42215 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42216 13 0.15719 3.27118 2.73043 3.16274 13 - -
42217 1.38629 1.38629 1.38629 1.38629
42218 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42219 14 2.97980 2.52563 3.03204 0.19727 14 - -
42220 1.38629 1.38629 1.38629 1.38629
42221 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42222 15 3.30705 0.14631 3.36166 2.73626 15 - -
42223 1.38629 1.38629 1.38629 1.38629
42224 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42225 16 0.15719 3.27118 2.73043 3.16274 16 - -
42226 1.38629 1.38629 1.38629 1.38629
42227 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42228 17 2.86982 3.47591 0.13017 3.36931 17 - -
42229 1.38629 1.38629 1.38629 1.38629
42230 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42231 18 2.86982 3.47591 0.13017 3.36931 18 - -
42232 1.38629 1.38629 1.38629 1.38629
42233 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42234 19 3.30705 0.14631 3.36166 2.73626 19 - -
42235 1.38629 1.38629 1.38629 1.38629
42236 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42237 20 2.86982 3.47591 0.13017 3.36931 20 - -
42238 1.38629 1.38629 1.38629 1.38629
42239 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42240 21 2.97980 2.52563 3.03204 0.19727 21 - -
42241 1.38629 1.38629 1.38629 1.38629
42242 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42243 22 2.86982 3.47591 0.13017 3.36931 22 - -
42244 1.38629 1.38629 1.38629 1.38629
42245 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42246 23 0.15719 3.27118 2.73043 3.16274 23 - -
42247 1.38629 1.38629 1.38629 1.38629
42248 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42249 24 0.15719 3.27118 2.73043 3.16274 24 - -
42250 1.38629 1.38629 1.38629 1.38629
42251 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42252 25 2.97980 2.52563 3.03204 0.19727 25 - -
42253 1.38629 1.38629 1.38629 1.38629
42254 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42255 26 0.15719 3.27118 2.73043 3.16274 26 - -
42256 1.38629 1.38629 1.38629 1.38629
42257 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42258 27 3.30705 0.14631 3.36166 2.73626 27 - -
42259 1.38629 1.38629 1.38629 1.38629
42260 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42261 28 3.30705 0.14631 3.36166 2.73626 28 - -
42262 1.38629 1.38629 1.38629 1.38629
42263 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42264 29 3.30705 0.14631 3.36166 2.73626 29 - -
42265 1.38629 1.38629 1.38629 1.38629
42266 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42267 30 2.86982 3.47591 0.13017 3.36931 30 - -
42268 1.38629 1.38629 1.38629 1.38629
42269 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42270 31 3.30705 0.14631 3.36166 2.73626 31 - -
42271 1.38629 1.38629 1.38629 1.38629
42272 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42273 32 2.97980 2.52563 3.03204 0.19727 32 - -
42274 1.38629 1.38629 1.38629 1.38629
42275 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42276 33 2.86982 3.47591 0.13017 3.36931 33 - -
42277 1.38629 1.38629 1.38629 1.38629
42278 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42279 34 0.15719 3.27118 2.73043 3.16274 34 - -
42280 1.38629 1.38629 1.38629 1.38629
42281 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42282 35 0.15719 3.27118 2.73043 3.16274 35 - -
42283 1.38629 1.38629 1.38629 1.38629
42284 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42285 36 3.30705 0.14631 3.36166 2.73626 36 - -
42286 1.38629 1.38629 1.38629 1.38629
42287 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42288 37 2.97980 2.52563 3.03204 0.19727 37 - -
42289 1.38629 1.38629 1.38629 1.38629
42290 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42291 38 2.97980 2.52563 3.03204 0.19727 38 - -
42292 1.38629 1.38629 1.38629 1.38629
42293 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42294 39 0.54133 2.56226 1.37841 2.42004 39 - -
42295 1.38629 1.38629 1.38629 1.38629
42296 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42297 40 0.15719 3.27118 2.73043 3.16274 40 - -
42298 1.38629 1.38629 1.38629 1.38629
42299 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42300 41 2.86982 3.47591 0.13017 3.36931 41 - -
42301 1.38629 1.38629 1.38629 1.38629
42302 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42303 42 3.30705 0.14631 3.36166 2.73626 42 - -
42304 1.38629 1.38629 1.38629 1.38629
42305 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42306 43 0.15719 3.27118 2.73043 3.16274 43 - -
42307 1.38629 1.38629 1.38629 1.38629
42308 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42309 44 2.97980 2.52563 3.03204 0.19727 44 - -
42310 1.38629 1.38629 1.38629 1.38629
42311 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42312 45 0.15719 3.27118 2.73043 3.16274 45 - -
42313 1.38629 1.38629 1.38629 1.38629
42314 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
42315 //
42316 HMMER3/b [3.0 | March 2010]
42317 NAME 4_LSU_Metazoa_4_LSU_start_fortyoneb_long
42318 LENG 45
42319 ALPH DNA
42320 RF no
42321 CS no
42322 MAP yes
42323 DATE Wed Feb 29 11:37:44 2012
42324 NSEQ 3
42325 EFFN 3.000000
42326 CKSUM 929202663
42327 STATS LOCAL MSV -8.0030 0.72088
42328 STATS LOCAL VITERBI -7.9152 0.72088
42329 STATS LOCAL FORWARD -4.0145 0.72088
42330 HMM A C G T
42331 m->m m->i m->d i->m i->i d->m d->d
42332 COMPO 1.27679 1.32055 1.55992 1.41088
42333 1.38629 1.38629 1.38629 1.38629
42334 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
42335 1 2.97980 2.52563 3.03204 0.19727 1 - -
42336 1.38629 1.38629 1.38629 1.38629
42337 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42338 2 2.97980 2.52563 3.03204 0.19727 2 - -
42339 1.38629 1.38629 1.38629 1.38629
42340 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42341 3 2.97980 2.52563 3.03204 0.19727 3 - -
42342 1.38629 1.38629 1.38629 1.38629
42343 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42344 4 2.97980 2.52563 3.03204 0.19727 4 - -
42345 1.38629 1.38629 1.38629 1.38629
42346 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42347 5 2.86982 3.47591 0.13017 3.36931 5 - -
42348 1.38629 1.38629 1.38629 1.38629
42349 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42350 6 0.15719 3.27118 2.73043 3.16274 6 - -
42351 1.38629 1.38629 1.38629 1.38629
42352 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42353 7 3.30705 0.14631 3.36166 2.73626 7 - -
42354 1.38629 1.38629 1.38629 1.38629
42355 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42356 8 3.30705 0.14631 3.36166 2.73626 8 - -
42357 1.38629 1.38629 1.38629 1.38629
42358 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42359 9 2.97980 2.52563 3.03204 0.19727 9 - -
42360 1.38629 1.38629 1.38629 1.38629
42361 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42362 10 2.86982 3.47591 0.13017 3.36931 10 - -
42363 1.38629 1.38629 1.38629 1.38629
42364 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42365 11 0.15719 3.27118 2.73043 3.16274 11 - -
42366 1.38629 1.38629 1.38629 1.38629
42367 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42368 12 0.15719 3.27118 2.73043 3.16274 12 - -
42369 1.38629 1.38629 1.38629 1.38629
42370 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42371 13 3.30705 0.14631 3.36166 2.73626 13 - -
42372 1.38629 1.38629 1.38629 1.38629
42373 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42374 14 2.97980 2.52563 3.03204 0.19727 14 - -
42375 1.38629 1.38629 1.38629 1.38629
42376 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42377 15 3.30705 0.14631 3.36166 2.73626 15 - -
42378 1.38629 1.38629 1.38629 1.38629
42379 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42380 16 0.15719 3.27118 2.73043 3.16274 16 - -
42381 1.38629 1.38629 1.38629 1.38629
42382 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42383 17 2.86982 3.47591 0.13017 3.36931 17 - -
42384 1.38629 1.38629 1.38629 1.38629
42385 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42386 18 2.97980 2.52563 3.03204 0.19727 18 - -
42387 1.38629 1.38629 1.38629 1.38629
42388 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42389 19 3.30705 0.14631 3.36166 2.73626 19 - -
42390 1.38629 1.38629 1.38629 1.38629
42391 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42392 20 2.86982 3.47591 0.13017 3.36931 20 - -
42393 1.38629 1.38629 1.38629 1.38629
42394 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42395 21 0.15719 3.27118 2.73043 3.16274 21 - -
42396 1.38629 1.38629 1.38629 1.38629
42397 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42398 22 2.86982 3.47591 0.13017 3.36931 22 - -
42399 1.38629 1.38629 1.38629 1.38629
42400 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42401 23 0.15719 3.27118 2.73043 3.16274 23 - -
42402 1.38629 1.38629 1.38629 1.38629
42403 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42404 24 2.10082 2.21882 0.69930 1.30206 24 - -
42405 1.38629 1.38629 1.38629 1.38629
42406 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42407 25 3.30705 0.14631 3.36166 2.73626 25 - -
42408 1.38629 1.38629 1.38629 1.38629
42409 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42410 26 0.15719 3.27118 2.73043 3.16274 26 - -
42411 1.38629 1.38629 1.38629 1.38629
42412 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42413 27 3.30705 0.14631 3.36166 2.73626 27 - -
42414 1.38629 1.38629 1.38629 1.38629
42415 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42416 28 3.30705 0.14631 3.36166 2.73626 28 - -
42417 1.38629 1.38629 1.38629 1.38629
42418 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42419 29 3.30705 0.14631 3.36166 2.73626 29 - -
42420 1.38629 1.38629 1.38629 1.38629
42421 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42422 30 2.86982 3.47591 0.13017 3.36931 30 - -
42423 1.38629 1.38629 1.38629 1.38629
42424 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42425 31 3.30705 0.14631 3.36166 2.73626 31 - -
42426 1.38629 1.38629 1.38629 1.38629
42427 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42428 32 2.97980 2.52563 3.03204 0.19727 32 - -
42429 1.38629 1.38629 1.38629 1.38629
42430 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42431 33 2.86982 3.47591 0.13017 3.36931 33 - -
42432 1.38629 1.38629 1.38629 1.38629
42433 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42434 34 0.15719 3.27118 2.73043 3.16274 34 - -
42435 1.38629 1.38629 1.38629 1.38629
42436 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42437 35 0.15719 3.27118 2.73043 3.16274 35 - -
42438 1.38629 1.38629 1.38629 1.38629
42439 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42440 36 3.30705 0.14631 3.36166 2.73626 36 - -
42441 1.38629 1.38629 1.38629 1.38629
42442 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42443 37 2.97980 2.52563 3.03204 0.19727 37 - -
42444 1.38629 1.38629 1.38629 1.38629
42445 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42446 38 2.97980 2.52563 3.03204 0.19727 38 - -
42447 1.38629 1.38629 1.38629 1.38629
42448 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42449 39 0.15719 3.27118 2.73043 3.16274 39 - -
42450 1.38629 1.38629 1.38629 1.38629
42451 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42452 40 0.15719 3.27118 2.73043 3.16274 40 - -
42453 1.38629 1.38629 1.38629 1.38629
42454 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42455 41 2.86982 3.47591 0.13017 3.36931 41 - -
42456 1.38629 1.38629 1.38629 1.38629
42457 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42458 42 3.30705 0.14631 3.36166 2.73626 42 - -
42459 1.38629 1.38629 1.38629 1.38629
42460 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42461 43 0.15719 3.27118 2.73043 3.16274 43 - -
42462 1.38629 1.38629 1.38629 1.38629
42463 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42464 44 2.97980 2.52563 3.03204 0.19727 44 - -
42465 1.38629 1.38629 1.38629 1.38629
42466 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42467 45 0.15719 3.27118 2.73043 3.16274 45 - -
42468 1.38629 1.38629 1.38629 1.38629
42469 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
42470 //
42471 HMMER3/b [3.0 | March 2010]
42472 NAME 4_LSU_Metazoa_4_LSU_start_fortyseven_long
42473 LENG 45
42474 ALPH DNA
42475 RF no
42476 CS no
42477 MAP yes
42478 DATE Wed Feb 29 11:39:13 2012
42479 NSEQ 4
42480 EFFN 3.386719
42481 CKSUM 506096181
42482 STATS LOCAL MSV -7.4774 0.71932
42483 STATS LOCAL VITERBI -7.6569 0.71932
42484 STATS LOCAL FORWARD -4.1355 0.71932
42485 HMM A C G T
42486 m->m m->i m->d i->m i->i d->m d->d
42487 COMPO 1.27567 1.14533 1.52677 1.68524
42488 1.38629 1.38629 1.38629 1.38629
42489 0.03646 4.02298 4.02298 1.46634 0.26236 0.00000 *
42490 1 2.64800 0.44394 2.71770 1.50655 1 - -
42491 1.38629 1.38629 1.38629 1.38629
42492 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42493 2 3.10913 2.60819 3.15650 0.17540 2 - -
42494 1.38629 1.38629 1.38629 1.38629
42495 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42496 3 3.45647 0.12746 3.50493 2.84597 3 - -
42497 1.38629 1.38629 1.38629 1.38629
42498 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42499 4 3.45647 0.12746 3.50493 2.84597 4 - -
42500 1.38629 1.38629 1.38629 1.38629
42501 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42502 5 2.96162 3.60830 0.11494 3.51511 5 - -
42503 1.38629 1.38629 1.38629 1.38629
42504 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42505 6 0.13925 3.40055 2.81508 3.30414 6 - -
42506 1.38629 1.38629 1.38629 1.38629
42507 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42508 7 3.45647 0.12746 3.50493 2.84597 7 - -
42509 1.38629 1.38629 1.38629 1.38629
42510 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42511 8 3.45647 0.12746 3.50493 2.84597 8 - -
42512 1.38629 1.38629 1.38629 1.38629
42513 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42514 9 3.10913 2.60819 3.15650 0.17540 9 - -
42515 1.38629 1.38629 1.38629 1.38629
42516 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42517 10 3.45647 0.12746 3.50493 2.84597 10 - -
42518 1.38629 1.38629 1.38629 1.38629
42519 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42520 11 2.96162 3.60830 0.11494 3.51511 11 - -
42521 1.38629 1.38629 1.38629 1.38629
42522 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42523 12 2.96162 3.60830 0.11494 3.51511 12 - -
42524 1.38629 1.38629 1.38629 1.38629
42525 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42526 13 0.13925 3.40055 2.81508 3.30414 13 - -
42527 1.38629 1.38629 1.38629 1.38629
42528 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42529 14 3.10913 2.60819 3.15650 0.17540 14 - -
42530 1.38629 1.38629 1.38629 1.38629
42531 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42532 15 3.45647 0.12746 3.50493 2.84597 15 - -
42533 1.38629 1.38629 1.38629 1.38629
42534 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42535 16 0.13925 3.40055 2.81508 3.30414 16 - -
42536 1.38629 1.38629 1.38629 1.38629
42537 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42538 17 2.96162 3.60830 0.11494 3.51511 17 - -
42539 1.38629 1.38629 1.38629 1.38629
42540 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42541 18 0.13925 3.40055 2.81508 3.30414 18 - -
42542 1.38629 1.38629 1.38629 1.38629
42543 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42544 19 3.45647 0.12746 3.50493 2.84597 19 - -
42545 1.38629 1.38629 1.38629 1.38629
42546 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42547 20 2.96162 3.60830 0.11494 3.51511 20 - -
42548 1.38629 1.38629 1.38629 1.38629
42549 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42550 21 0.13925 3.40055 2.81508 3.30414 21 - -
42551 1.38629 1.38629 1.38629 1.38629
42552 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42553 22 2.96162 3.60830 0.11494 3.51511 22 - -
42554 1.38629 1.38629 1.38629 1.38629
42555 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42556 23 0.13925 3.40055 2.81508 3.30414 23 - -
42557 1.38629 1.38629 1.38629 1.38629
42558 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42559 24 3.45647 0.12746 3.50493 2.84597 24 - -
42560 1.38629 1.38629 1.38629 1.38629
42561 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42562 25 3.10913 2.60819 3.15650 0.17540 25 - -
42563 1.38629 1.38629 1.38629 1.38629
42564 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42565 26 0.13925 3.40055 2.81508 3.30414 26 - -
42566 1.38629 1.38629 1.38629 1.38629
42567 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42568 27 3.45647 0.12746 3.50493 2.84597 27 - -
42569 1.38629 1.38629 1.38629 1.38629
42570 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42571 28 3.45647 0.12746 3.50493 2.84597 28 - -
42572 1.38629 1.38629 1.38629 1.38629
42573 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42574 29 3.45647 0.12746 3.50493 2.84597 29 - -
42575 1.38629 1.38629 1.38629 1.38629
42576 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42577 30 2.96162 3.60830 0.11494 3.51511 30 - -
42578 1.38629 1.38629 1.38629 1.38629
42579 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42580 31 3.45647 0.12746 3.50493 2.84597 31 - -
42581 1.38629 1.38629 1.38629 1.38629
42582 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42583 32 2.41720 0.96408 2.48911 0.80629 32 - -
42584 1.38629 1.38629 1.38629 1.38629
42585 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42586 33 2.96162 3.60830 0.11494 3.51511 33 - -
42587 1.38629 1.38629 1.38629 1.38629
42588 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42589 34 0.13925 3.40055 2.81508 3.30414 34 - -
42590 1.38629 1.38629 1.38629 1.38629
42591 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42592 35 0.13925 3.40055 2.81508 3.30414 35 - -
42593 1.38629 1.38629 1.38629 1.38629
42594 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42595 36 3.45647 0.12746 3.50493 2.84597 36 - -
42596 1.38629 1.38629 1.38629 1.38629
42597 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42598 37 3.10913 2.60819 3.15650 0.17540 37 - -
42599 1.38629 1.38629 1.38629 1.38629
42600 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42601 38 3.10913 2.60819 3.15650 0.17540 38 - -
42602 1.38629 1.38629 1.38629 1.38629
42603 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42604 39 0.13925 3.40055 2.81508 3.30414 39 - -
42605 1.38629 1.38629 1.38629 1.38629
42606 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42607 40 0.13925 3.40055 2.81508 3.30414 40 - -
42608 1.38629 1.38629 1.38629 1.38629
42609 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42610 41 2.96162 3.60830 0.11494 3.51511 41 - -
42611 1.38629 1.38629 1.38629 1.38629
42612 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42613 42 3.45647 0.12746 3.50493 2.84597 42 - -
42614 1.38629 1.38629 1.38629 1.38629
42615 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42616 43 0.13925 3.40055 2.81508 3.30414 43 - -
42617 1.38629 1.38629 1.38629 1.38629
42618 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42619 44 3.10913 2.60819 3.15650 0.17540 44 - -
42620 1.38629 1.38629 1.38629 1.38629
42621 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547
42622 45 0.13925 3.40055 2.81508 3.30414 45 - -
42623 1.38629 1.38629 1.38629 1.38629
42624 0.01839 4.00492 * 1.46634 0.26236 0.00000 *
42625 //
42626 HMMER3/b [3.0 | March 2010]
42627 NAME 4_LSU_Metazoa_4_LSU_start_fortysix_long
42628 LENG 45
42629 ALPH DNA
42630 RF no
42631 CS no
42632 MAP yes
42633 DATE Wed Feb 29 11:39:02 2012
42634 NSEQ 5
42635 EFFN 3.520508
42636 CKSUM 110130574
42637 STATS LOCAL MSV -7.5423 0.71933
42638 STATS LOCAL VITERBI -7.7453 0.71933
42639 STATS LOCAL FORWARD -4.2471 0.71933
42640 HMM A C G T
42641 m->m m->i m->d i->m i->i d->m d->d
42642 COMPO 1.26520 1.20006 1.54145 1.59667
42643 1.38629 1.38629 1.38629 1.38629
42644 0.03559 4.04664 4.04664 1.46634 0.26236 0.00000 *
42645 1 2.47058 0.72118 2.54263 1.04803 1 - -
42646 1.38629 1.38629 1.38629 1.38629
42647 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42648 2 3.15091 2.63471 3.19667 0.16895 2 - -
42649 1.38629 1.38629 1.38629 1.38629
42650 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42651 3 3.50359 0.12211 3.55001 2.88003 3 - -
42652 1.38629 1.38629 1.38629 1.38629
42653 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42654 4 3.50359 0.12211 3.55001 2.88003 4 - -
42655 1.38629 1.38629 1.38629 1.38629
42656 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42657 5 2.98981 3.64957 0.11061 3.56075 5 - -
42658 1.38629 1.38629 1.38629 1.38629
42659 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42660 6 0.13406 3.44156 2.84159 3.34909 6 - -
42661 1.38629 1.38629 1.38629 1.38629
42662 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42663 7 3.50359 0.12211 3.55001 2.88003 7 - -
42664 1.38629 1.38629 1.38629 1.38629
42665 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42666 8 3.50359 0.12211 3.55001 2.88003 8 - -
42667 1.38629 1.38629 1.38629 1.38629
42668 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42669 9 3.15091 2.63471 3.19667 0.16895 9 - -
42670 1.38629 1.38629 1.38629 1.38629
42671 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42672 10 3.50359 0.12211 3.55001 2.88003 10 - -
42673 1.38629 1.38629 1.38629 1.38629
42674 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42675 11 1.86609 2.99735 0.30300 2.86904 11 - -
42676 1.38629 1.38629 1.38629 1.38629
42677 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42678 12 2.98981 3.64957 0.11061 3.56075 12 - -
42679 1.38629 1.38629 1.38629 1.38629
42680 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42681 13 0.13406 3.44156 2.84159 3.34909 13 - -
42682 1.38629 1.38629 1.38629 1.38629
42683 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42684 14 3.15091 2.63471 3.19667 0.16895 14 - -
42685 1.38629 1.38629 1.38629 1.38629
42686 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42687 15 3.50359 0.12211 3.55001 2.88003 15 - -
42688 1.38629 1.38629 1.38629 1.38629
42689 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42690 16 0.13406 3.44156 2.84159 3.34909 16 - -
42691 1.38629 1.38629 1.38629 1.38629
42692 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42693 17 2.98981 3.64957 0.11061 3.56075 17 - -
42694 1.38629 1.38629 1.38629 1.38629
42695 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42696 18 0.13406 3.44156 2.84159 3.34909 18 - -
42697 1.38629 1.38629 1.38629 1.38629
42698 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42699 19 3.50359 0.12211 3.55001 2.88003 19 - -
42700 1.38629 1.38629 1.38629 1.38629
42701 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42702 20 2.98981 3.64957 0.11061 3.56075 20 - -
42703 1.38629 1.38629 1.38629 1.38629
42704 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42705 21 0.13406 3.44156 2.84159 3.34909 21 - -
42706 1.38629 1.38629 1.38629 1.38629
42707 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42708 22 2.98981 3.64957 0.11061 3.56075 22 - -
42709 1.38629 1.38629 1.38629 1.38629
42710 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42711 23 0.13406 3.44156 2.84159 3.34909 23 - -
42712 1.38629 1.38629 1.38629 1.38629
42713 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42714 24 3.50359 0.12211 3.55001 2.88003 24 - -
42715 1.38629 1.38629 1.38629 1.38629
42716 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42717 25 3.15091 2.63471 3.19667 0.16895 25 - -
42718 1.38629 1.38629 1.38629 1.38629
42719 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42720 26 0.13406 3.44156 2.84159 3.34909 26 - -
42721 1.38629 1.38629 1.38629 1.38629
42722 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42723 27 3.50359 0.12211 3.55001 2.88003 27 - -
42724 1.38629 1.38629 1.38629 1.38629
42725 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42726 28 3.50359 0.12211 3.55001 2.88003 28 - -
42727 1.38629 1.38629 1.38629 1.38629
42728 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42729 29 3.50359 0.12211 3.55001 2.88003 29 - -
42730 1.38629 1.38629 1.38629 1.38629
42731 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42732 30 2.98981 3.64957 0.11061 3.56075 30 - -
42733 1.38629 1.38629 1.38629 1.38629
42734 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42735 31 3.50359 0.12211 3.55001 2.88003 31 - -
42736 1.38629 1.38629 1.38629 1.38629
42737 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42738 32 3.15091 2.63471 3.19667 0.16895 32 - -
42739 1.38629 1.38629 1.38629 1.38629
42740 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42741 33 2.98981 3.64957 0.11061 3.56075 33 - -
42742 1.38629 1.38629 1.38629 1.38629
42743 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42744 34 0.13406 3.44156 2.84159 3.34909 34 - -
42745 1.38629 1.38629 1.38629 1.38629
42746 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42747 35 0.13406 3.44156 2.84159 3.34909 35 - -
42748 1.38629 1.38629 1.38629 1.38629
42749 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42750 36 2.46474 0.73956 2.53682 1.02575 36 - -
42751 1.38629 1.38629 1.38629 1.38629
42752 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42753 37 3.15091 2.63471 3.19667 0.16895 37 - -
42754 1.38629 1.38629 1.38629 1.38629
42755 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42756 38 3.15091 2.63471 3.19667 0.16895 38 - -
42757 1.38629 1.38629 1.38629 1.38629
42758 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42759 39 0.13406 3.44156 2.84159 3.34909 39 - -
42760 1.38629 1.38629 1.38629 1.38629
42761 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42762 40 0.13406 3.44156 2.84159 3.34909 40 - -
42763 1.38629 1.38629 1.38629 1.38629
42764 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42765 41 2.98981 3.64957 0.11061 3.56075 41 - -
42766 1.38629 1.38629 1.38629 1.38629
42767 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42768 42 3.50359 0.12211 3.55001 2.88003 42 - -
42769 1.38629 1.38629 1.38629 1.38629
42770 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42771 43 0.13406 3.44156 2.84159 3.34909 43 - -
42772 1.38629 1.38629 1.38629 1.38629
42773 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42774 44 3.15091 2.63471 3.19667 0.16895 44 - -
42775 1.38629 1.38629 1.38629 1.38629
42776 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547
42777 45 0.13406 3.44156 2.84159 3.34909 45 - -
42778 1.38629 1.38629 1.38629 1.38629
42779 0.01795 4.02901 * 1.46634 0.26236 0.00000 *
42780 //
42781 HMMER3/b [3.0 | March 2010]
42782 NAME 4_LSU_Metazoa_4_LSU_start_fortythreea_long
42783 LENG 45
42784 ALPH DNA
42785 RF no
42786 CS no
42787 MAP yes
42788 DATE Wed Feb 29 11:38:10 2012
42789 NSEQ 2
42790 EFFN 2.000000
42791 CKSUM 3285087360
42792 STATS LOCAL MSV -7.4672 0.72897
42793 STATS LOCAL VITERBI -8.3344 0.72897
42794 STATS LOCAL FORWARD -3.4614 0.72897
42795 HMM A C G T
42796 m->m m->i m->d i->m i->i d->m d->d
42797 COMPO 1.26742 1.43435 1.48777 1.36926
42798 1.38629 1.38629 1.38629 1.38629
42799 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
42800 1 1.01448 1.11006 1.95471 1.79419 1 - -
42801 1.38629 1.38629 1.38629 1.38629
42802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42803 2 2.53331 3.02441 0.20344 2.88069 2 - -
42804 1.38629 1.38629 1.38629 1.38629
42805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42806 3 2.57915 2.25909 2.64442 0.28946 3 - -
42807 1.38629 1.38629 1.38629 1.38629
42808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42809 4 0.23862 2.84929 2.43386 2.70756 4 - -
42810 1.38629 1.38629 1.38629 1.38629
42811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42812 5 2.53331 3.02441 0.20344 2.88069 5 - -
42813 1.38629 1.38629 1.38629 1.38629
42814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42815 6 2.53331 3.02441 0.20344 2.88069 6 - -
42816 1.38629 1.38629 1.38629 1.38629
42817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42818 7 2.81865 0.23582 2.88868 2.35662 7 - -
42819 1.38629 1.38629 1.38629 1.38629
42820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42821 8 2.81865 0.23582 2.88868 2.35662 8 - -
42822 1.38629 1.38629 1.38629 1.38629
42823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42824 9 2.57915 2.25909 2.64442 0.28946 9 - -
42825 1.38629 1.38629 1.38629 1.38629
42826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42827 10 2.81865 0.23582 2.88868 2.35662 10 - -
42828 1.38629 1.38629 1.38629 1.38629
42829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42830 11 0.23862 2.84929 2.43386 2.70756 11 - -
42831 1.38629 1.38629 1.38629 1.38629
42832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42833 12 0.23862 2.84929 2.43386 2.70756 12 - -
42834 1.38629 1.38629 1.38629 1.38629
42835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42836 13 2.53331 3.02441 0.20344 2.88069 13 - -
42837 1.38629 1.38629 1.38629 1.38629
42838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42839 14 2.57915 2.25909 2.64442 0.28946 14 - -
42840 1.38629 1.38629 1.38629 1.38629
42841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42842 15 2.53331 3.02441 0.20344 2.88069 15 - -
42843 1.38629 1.38629 1.38629 1.38629
42844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42845 16 0.23862 2.84929 2.43386 2.70756 16 - -
42846 1.38629 1.38629 1.38629 1.38629
42847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42848 17 2.57915 2.25909 2.64442 0.28946 17 - -
42849 1.38629 1.38629 1.38629 1.38629
42850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42851 18 2.53331 3.02441 0.20344 2.88069 18 - -
42852 1.38629 1.38629 1.38629 1.38629
42853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42854 19 2.57915 2.25909 2.64442 0.28946 19 - -
42855 1.38629 1.38629 1.38629 1.38629
42856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42857 20 2.53331 3.02441 0.20344 2.88069 20 - -
42858 1.38629 1.38629 1.38629 1.38629
42859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42860 21 2.57915 2.25909 2.64442 0.28946 21 - -
42861 1.38629 1.38629 1.38629 1.38629
42862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42863 22 2.53331 3.02441 0.20344 2.88069 22 - -
42864 1.38629 1.38629 1.38629 1.38629
42865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42866 23 0.23862 2.84929 2.43386 2.70756 23 - -
42867 1.38629 1.38629 1.38629 1.38629
42868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42869 24 2.81865 0.23582 2.88868 2.35662 24 - -
42870 1.38629 1.38629 1.38629 1.38629
42871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42872 25 2.57915 2.25909 2.64442 0.28946 25 - -
42873 1.38629 1.38629 1.38629 1.38629
42874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42875 26 0.23862 2.84929 2.43386 2.70756 26 - -
42876 1.38629 1.38629 1.38629 1.38629
42877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42878 27 2.81865 0.23582 2.88868 2.35662 27 - -
42879 1.38629 1.38629 1.38629 1.38629
42880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42881 28 2.81865 0.23582 2.88868 2.35662 28 - -
42882 1.38629 1.38629 1.38629 1.38629
42883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42884 29 2.81865 0.23582 2.88868 2.35662 29 - -
42885 1.38629 1.38629 1.38629 1.38629
42886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42887 30 2.81865 0.23582 2.88868 2.35662 30 - -
42888 1.38629 1.38629 1.38629 1.38629
42889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42890 31 2.81865 0.23582 2.88868 2.35662 31 - -
42891 1.38629 1.38629 1.38629 1.38629
42892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42893 32 2.57915 2.25909 2.64442 0.28946 32 - -
42894 1.38629 1.38629 1.38629 1.38629
42895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42896 33 0.23862 2.84929 2.43386 2.70756 33 - -
42897 1.38629 1.38629 1.38629 1.38629
42898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42899 34 0.23862 2.84929 2.43386 2.70756 34 - -
42900 1.38629 1.38629 1.38629 1.38629
42901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42902 35 0.23862 2.84929 2.43386 2.70756 35 - -
42903 1.38629 1.38629 1.38629 1.38629
42904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42905 36 2.57915 2.25909 2.64442 0.28946 36 - -
42906 1.38629 1.38629 1.38629 1.38629
42907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42908 37 2.57915 2.25909 2.64442 0.28946 37 - -
42909 1.38629 1.38629 1.38629 1.38629
42910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42911 38 2.57915 2.25909 2.64442 0.28946 38 - -
42912 1.38629 1.38629 1.38629 1.38629
42913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42914 39 0.23862 2.84929 2.43386 2.70756 39 - -
42915 1.38629 1.38629 1.38629 1.38629
42916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42917 40 0.23862 2.84929 2.43386 2.70756 40 - -
42918 1.38629 1.38629 1.38629 1.38629
42919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42920 41 2.53331 3.02441 0.20344 2.88069 41 - -
42921 1.38629 1.38629 1.38629 1.38629
42922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42923 42 2.81865 0.23582 2.88868 2.35662 42 - -
42924 1.38629 1.38629 1.38629 1.38629
42925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42926 43 0.23862 2.84929 2.43386 2.70756 43 - -
42927 1.38629 1.38629 1.38629 1.38629
42928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42929 44 2.57915 2.25909 2.64442 0.28946 44 - -
42930 1.38629 1.38629 1.38629 1.38629
42931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
42932 45 0.23862 2.84929 2.43386 2.70756 45 - -
42933 1.38629 1.38629 1.38629 1.38629
42934 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
42935 //
42936 HMMER3/b [3.0 | March 2010]
42937 NAME 4_LSU_Metazoa_4_LSU_start_fortythreeb_long
42938 LENG 45
42939 ALPH DNA
42940 RF no
42941 CS no
42942 MAP yes
42943 DATE Wed Feb 29 11:38:18 2012
42944 NSEQ 3
42945 EFFN 3.000000
42946 CKSUM 1330444769
42947 STATS LOCAL MSV -8.1653 0.72121
42948 STATS LOCAL VITERBI -7.7606 0.72121
42949 STATS LOCAL FORWARD -3.9063 0.72121
42950 HMM A C G T
42951 m->m m->i m->d i->m i->i d->m d->d
42952 COMPO 1.24373 1.24730 1.57852 1.52265
42953 1.38629 1.38629 1.38629 1.38629
42954 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
42955 1 3.30705 0.14631 3.36166 2.73626 1 - -
42956 1.38629 1.38629 1.38629 1.38629
42957 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42958 2 2.97980 2.52563 3.03204 0.19727 2 - -
42959 1.38629 1.38629 1.38629 1.38629
42960 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42961 3 0.15719 3.27118 2.73043 3.16274 3 - -
42962 1.38629 1.38629 1.38629 1.38629
42963 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42964 4 3.30705 0.14631 3.36166 2.73626 4 - -
42965 1.38629 1.38629 1.38629 1.38629
42966 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42967 5 2.86982 3.47591 0.13017 3.36931 5 - -
42968 1.38629 1.38629 1.38629 1.38629
42969 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42970 6 0.15719 3.27118 2.73043 3.16274 6 - -
42971 1.38629 1.38629 1.38629 1.38629
42972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42973 7 3.30705 0.14631 3.36166 2.73626 7 - -
42974 1.38629 1.38629 1.38629 1.38629
42975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42976 8 3.30705 0.14631 3.36166 2.73626 8 - -
42977 1.38629 1.38629 1.38629 1.38629
42978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42979 9 2.97980 2.52563 3.03204 0.19727 9 - -
42980 1.38629 1.38629 1.38629 1.38629
42981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42982 10 3.30705 0.14631 3.36166 2.73626 10 - -
42983 1.38629 1.38629 1.38629 1.38629
42984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42985 11 0.15719 3.27118 2.73043 3.16274 11 - -
42986 1.38629 1.38629 1.38629 1.38629
42987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42988 12 2.86982 3.47591 0.13017 3.36931 12 - -
42989 1.38629 1.38629 1.38629 1.38629
42990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42991 13 0.66361 1.42357 2.15007 2.05820 13 - -
42992 1.38629 1.38629 1.38629 1.38629
42993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42994 14 2.97980 2.52563 3.03204 0.19727 14 - -
42995 1.38629 1.38629 1.38629 1.38629
42996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
42997 15 3.30705 0.14631 3.36166 2.73626 15 - -
42998 1.38629 1.38629 1.38629 1.38629
42999 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43000 16 0.15719 3.27118 2.73043 3.16274 16 - -
43001 1.38629 1.38629 1.38629 1.38629
43002 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43003 17 2.86982 3.47591 0.13017 3.36931 17 - -
43004 1.38629 1.38629 1.38629 1.38629
43005 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43006 18 0.15719 3.27118 2.73043 3.16274 18 - -
43007 1.38629 1.38629 1.38629 1.38629
43008 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43009 19 3.30705 0.14631 3.36166 2.73626 19 - -
43010 1.38629 1.38629 1.38629 1.38629
43011 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43012 20 2.86982 3.47591 0.13017 3.36931 20 - -
43013 1.38629 1.38629 1.38629 1.38629
43014 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43015 21 2.97980 2.52563 3.03204 0.19727 21 - -
43016 1.38629 1.38629 1.38629 1.38629
43017 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43018 22 2.86982 3.47591 0.13017 3.36931 22 - -
43019 1.38629 1.38629 1.38629 1.38629
43020 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43021 23 2.12334 2.11792 1.37287 0.67982 23 - -
43022 1.38629 1.38629 1.38629 1.38629
43023 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43024 24 3.30705 0.14631 3.36166 2.73626 24 - -
43025 1.38629 1.38629 1.38629 1.38629
43026 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43027 25 0.15719 3.27118 2.73043 3.16274 25 - -
43028 1.38629 1.38629 1.38629 1.38629
43029 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43030 26 0.15719 3.27118 2.73043 3.16274 26 - -
43031 1.38629 1.38629 1.38629 1.38629
43032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43033 27 3.30705 0.14631 3.36166 2.73626 27 - -
43034 1.38629 1.38629 1.38629 1.38629
43035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43036 28 3.30705 0.14631 3.36166 2.73626 28 - -
43037 1.38629 1.38629 1.38629 1.38629
43038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43039 29 3.30705 0.14631 3.36166 2.73626 29 - -
43040 1.38629 1.38629 1.38629 1.38629
43041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43042 30 2.86982 3.47591 0.13017 3.36931 30 - -
43043 1.38629 1.38629 1.38629 1.38629
43044 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43045 31 3.30705 0.14631 3.36166 2.73626 31 - -
43046 1.38629 1.38629 1.38629 1.38629
43047 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43048 32 2.97980 2.52563 3.03204 0.19727 32 - -
43049 1.38629 1.38629 1.38629 1.38629
43050 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43051 33 2.86982 3.47591 0.13017 3.36931 33 - -
43052 1.38629 1.38629 1.38629 1.38629
43053 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43054 34 0.15719 3.27118 2.73043 3.16274 34 - -
43055 1.38629 1.38629 1.38629 1.38629
43056 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43057 35 0.15719 3.27118 2.73043 3.16274 35 - -
43058 1.38629 1.38629 1.38629 1.38629
43059 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43060 36 2.97980 2.52563 3.03204 0.19727 36 - -
43061 1.38629 1.38629 1.38629 1.38629
43062 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43063 37 2.97980 2.52563 3.03204 0.19727 37 - -
43064 1.38629 1.38629 1.38629 1.38629
43065 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43066 38 2.97980 2.52563 3.03204 0.19727 38 - -
43067 1.38629 1.38629 1.38629 1.38629
43068 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43069 39 0.15719 3.27118 2.73043 3.16274 39 - -
43070 1.38629 1.38629 1.38629 1.38629
43071 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43072 40 0.15719 3.27118 2.73043 3.16274 40 - -
43073 1.38629 1.38629 1.38629 1.38629
43074 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43075 41 2.86982 3.47591 0.13017 3.36931 41 - -
43076 1.38629 1.38629 1.38629 1.38629
43077 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43078 42 3.30705 0.14631 3.36166 2.73626 42 - -
43079 1.38629 1.38629 1.38629 1.38629
43080 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43081 43 0.15719 3.27118 2.73043 3.16274 43 - -
43082 1.38629 1.38629 1.38629 1.38629
43083 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43084 44 2.97980 2.52563 3.03204 0.19727 44 - -
43085 1.38629 1.38629 1.38629 1.38629
43086 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43087 45 0.15719 3.27118 2.73043 3.16274 45 - -
43088 1.38629 1.38629 1.38629 1.38629
43089 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
43090 //
43091 HMMER3/b [3.0 | March 2010]
43092 NAME 4_LSU_Metazoa_4_LSU_start_fortytwoa_long
43093 LENG 45
43094 ALPH DNA
43095 RF no
43096 CS no
43097 MAP yes
43098 DATE Wed Feb 29 11:37:57 2012
43099 NSEQ 3
43100 EFFN 3.000000
43101 CKSUM 2178489850
43102 STATS LOCAL MSV -8.1532 0.72099
43103 STATS LOCAL VITERBI -7.7294 0.72099
43104 STATS LOCAL FORWARD -3.9694 0.72099
43105 HMM A C G T
43106 m->m m->i m->d i->m i->i d->m d->d
43107 COMPO 1.20847 1.23061 1.78114 1.42385
43108 1.38629 1.38629 1.38629 1.38629
43109 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
43110 1 0.15719 3.27118 2.73043 3.16274 1 - -
43111 1.38629 1.38629 1.38629 1.38629
43112 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43113 2 3.30705 0.14631 3.36166 2.73626 2 - -
43114 1.38629 1.38629 1.38629 1.38629
43115 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43116 3 0.15719 3.27118 2.73043 3.16274 3 - -
43117 1.38629 1.38629 1.38629 1.38629
43118 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43119 4 2.97980 2.52563 3.03204 0.19727 4 - -
43120 1.38629 1.38629 1.38629 1.38629
43121 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43122 5 0.15719 3.27118 2.73043 3.16274 5 - -
43123 1.38629 1.38629 1.38629 1.38629
43124 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43125 6 2.86982 3.47591 0.13017 3.36931 6 - -
43126 1.38629 1.38629 1.38629 1.38629
43127 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43128 7 3.30705 0.14631 3.36166 2.73626 7 - -
43129 1.38629 1.38629 1.38629 1.38629
43130 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43131 8 3.30705 0.14631 3.36166 2.73626 8 - -
43132 1.38629 1.38629 1.38629 1.38629
43133 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43134 9 2.97980 2.52563 3.03204 0.19727 9 - -
43135 1.38629 1.38629 1.38629 1.38629
43136 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43137 10 3.30705 0.14631 3.36166 2.73626 10 - -
43138 1.38629 1.38629 1.38629 1.38629
43139 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43140 11 1.32295 0.73131 2.17864 1.97201 11 - -
43141 1.38629 1.38629 1.38629 1.38629
43142 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43143 12 0.15719 3.27118 2.73043 3.16274 12 - -
43144 1.38629 1.38629 1.38629 1.38629
43145 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43146 13 3.30705 0.14631 3.36166 2.73626 13 - -
43147 1.38629 1.38629 1.38629 1.38629
43148 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43149 14 2.97980 2.52563 3.03204 0.19727 14 - -
43150 1.38629 1.38629 1.38629 1.38629
43151 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43152 15 3.30705 0.14631 3.36166 2.73626 15 - -
43153 1.38629 1.38629 1.38629 1.38629
43154 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43155 16 0.15719 3.27118 2.73043 3.16274 16 - -
43156 1.38629 1.38629 1.38629 1.38629
43157 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43158 17 2.97980 2.52563 3.03204 0.19727 17 - -
43159 1.38629 1.38629 1.38629 1.38629
43160 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43161 18 2.86982 3.47591 0.13017 3.36931 18 - -
43162 1.38629 1.38629 1.38629 1.38629
43163 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43164 19 2.97980 2.52563 3.03204 0.19727 19 - -
43165 1.38629 1.38629 1.38629 1.38629
43166 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43167 20 2.86982 3.47591 0.13017 3.36931 20 - -
43168 1.38629 1.38629 1.38629 1.38629
43169 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43170 21 0.15719 3.27118 2.73043 3.16274 21 - -
43171 1.38629 1.38629 1.38629 1.38629
43172 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43173 22 2.86982 3.47591 0.13017 3.36931 22 - -
43174 1.38629 1.38629 1.38629 1.38629
43175 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43176 23 0.15719 3.27118 2.73043 3.16274 23 - -
43177 1.38629 1.38629 1.38629 1.38629
43178 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43179 24 3.30705 0.14631 3.36166 2.73626 24 - -
43180 1.38629 1.38629 1.38629 1.38629
43181 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43182 25 2.97980 2.52563 3.03204 0.19727 25 - -
43183 1.38629 1.38629 1.38629 1.38629
43184 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43185 26 0.15719 3.27118 2.73043 3.16274 26 - -
43186 1.38629 1.38629 1.38629 1.38629
43187 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43188 27 3.30705 0.14631 3.36166 2.73626 27 - -
43189 1.38629 1.38629 1.38629 1.38629
43190 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43191 28 3.30705 0.14631 3.36166 2.73626 28 - -
43192 1.38629 1.38629 1.38629 1.38629
43193 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43194 29 3.30705 0.14631 3.36166 2.73626 29 - -
43195 1.38629 1.38629 1.38629 1.38629
43196 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43197 30 3.30705 0.14631 3.36166 2.73626 30 - -
43198 1.38629 1.38629 1.38629 1.38629
43199 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43200 31 3.30705 0.14631 3.36166 2.73626 31 - -
43201 1.38629 1.38629 1.38629 1.38629
43202 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43203 32 2.97980 2.52563 3.03204 0.19727 32 - -
43204 1.38629 1.38629 1.38629 1.38629
43205 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43206 33 2.86982 3.47591 0.13017 3.36931 33 - -
43207 1.38629 1.38629 1.38629 1.38629
43208 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43209 34 0.15719 3.27118 2.73043 3.16274 34 - -
43210 1.38629 1.38629 1.38629 1.38629
43211 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43212 35 0.15719 3.27118 2.73043 3.16274 35 - -
43213 1.38629 1.38629 1.38629 1.38629
43214 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43215 36 2.97980 2.52563 3.03204 0.19727 36 - -
43216 1.38629 1.38629 1.38629 1.38629
43217 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43218 37 2.97980 2.52563 3.03204 0.19727 37 - -
43219 1.38629 1.38629 1.38629 1.38629
43220 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43221 38 2.97980 2.52563 3.03204 0.19727 38 - -
43222 1.38629 1.38629 1.38629 1.38629
43223 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43224 39 0.15719 3.27118 2.73043 3.16274 39 - -
43225 1.38629 1.38629 1.38629 1.38629
43226 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43227 40 0.15719 3.27118 2.73043 3.16274 40 - -
43228 1.38629 1.38629 1.38629 1.38629
43229 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43230 41 2.86982 3.47591 0.13017 3.36931 41 - -
43231 1.38629 1.38629 1.38629 1.38629
43232 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43233 42 3.30705 0.14631 3.36166 2.73626 42 - -
43234 1.38629 1.38629 1.38629 1.38629
43235 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43236 43 0.15719 3.27118 2.73043 3.16274 43 - -
43237 1.38629 1.38629 1.38629 1.38629
43238 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43239 44 2.97980 2.52563 3.03204 0.19727 44 - -
43240 1.38629 1.38629 1.38629 1.38629
43241 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43242 45 0.15719 3.27118 2.73043 3.16274 45 - -
43243 1.38629 1.38629 1.38629 1.38629
43244 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
43245 //
43246 HMMER3/b [3.0 | March 2010]
43247 NAME 4_LSU_Metazoa_4_LSU_start_foura_long
43248 LENG 45
43249 ALPH DNA
43250 RF no
43251 CS no
43252 MAP yes
43253 DATE Mon Feb 27 22:49:53 2012
43254 NSEQ 15
43255 EFFN 3.504639
43256 CKSUM 2507778126
43257 STATS LOCAL MSV -7.5617 0.71933
43258 STATS LOCAL VITERBI -7.7985 0.71933
43259 STATS LOCAL FORWARD -4.1327 0.71933
43260 HMM A C G T
43261 m->m m->i m->d i->m i->i d->m d->d
43262 COMPO 1.24885 1.29821 1.59403 1.43953
43263 1.38629 1.38629 1.38629 1.38629
43264 0.03569 4.04386 4.04386 1.46634 0.26236 0.00000 *
43265 1 3.14603 2.63161 3.19198 0.16969 1 - -
43266 1.38629 1.38629 1.38629 1.38629
43267 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43268 2 3.14603 2.63161 3.19198 0.16969 2 - -
43269 1.38629 1.38629 1.38629 1.38629
43270 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43271 3 3.14603 2.63161 3.19198 0.16969 3 - -
43272 1.38629 1.38629 1.38629 1.38629
43273 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43274 4 3.49812 0.12271 3.54478 2.87609 4 - -
43275 1.38629 1.38629 1.38629 1.38629
43276 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43277 5 2.98656 3.64479 0.11111 3.55546 5 - -
43278 1.38629 1.38629 1.38629 1.38629
43279 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43280 6 0.13465 3.43679 2.83851 3.34386 6 - -
43281 1.38629 1.38629 1.38629 1.38629
43282 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43283 7 3.49812 0.12271 3.54478 2.87609 7 - -
43284 1.38629 1.38629 1.38629 1.38629
43285 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43286 8 3.49812 0.12271 3.54478 2.87609 8 - -
43287 1.38629 1.38629 1.38629 1.38629
43288 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43289 9 3.14603 2.63161 3.19198 0.16969 9 - -
43290 1.38629 1.38629 1.38629 1.38629
43291 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43292 10 2.98656 3.64479 0.11111 3.55546 10 - -
43293 1.38629 1.38629 1.38629 1.38629
43294 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43295 11 0.13465 3.43679 2.83851 3.34386 11 - -
43296 1.38629 1.38629 1.38629 1.38629
43297 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43298 12 0.13465 3.43679 2.83851 3.34386 12 - -
43299 1.38629 1.38629 1.38629 1.38629
43300 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43301 13 3.49812 0.12271 3.54478 2.87609 13 - -
43302 1.38629 1.38629 1.38629 1.38629
43303 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43304 14 3.14603 2.63161 3.19198 0.16969 14 - -
43305 1.38629 1.38629 1.38629 1.38629
43306 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43307 15 3.49812 0.12271 3.54478 2.87609 15 - -
43308 1.38629 1.38629 1.38629 1.38629
43309 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43310 16 0.13465 3.43679 2.83851 3.34386 16 - -
43311 1.38629 1.38629 1.38629 1.38629
43312 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43313 17 2.98656 3.64479 0.11111 3.55546 17 - -
43314 1.38629 1.38629 1.38629 1.38629
43315 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43316 18 0.13465 3.43679 2.83851 3.34386 18 - -
43317 1.38629 1.38629 1.38629 1.38629
43318 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43319 19 3.49812 0.12271 3.54478 2.87609 19 - -
43320 1.38629 1.38629 1.38629 1.38629
43321 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43322 20 2.98656 3.64479 0.11111 3.55546 20 - -
43323 1.38629 1.38629 1.38629 1.38629
43324 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43325 21 3.14603 2.63161 3.19198 0.16969 21 - -
43326 1.38629 1.38629 1.38629 1.38629
43327 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43328 22 2.98656 3.64479 0.11111 3.55546 22 - -
43329 1.38629 1.38629 1.38629 1.38629
43330 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43331 23 0.13465 3.43679 2.83851 3.34386 23 - -
43332 1.38629 1.38629 1.38629 1.38629
43333 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43334 24 0.85624 1.61968 1.42525 1.98899 24 - -
43335 1.38629 1.38629 1.38629 1.38629
43336 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43337 25 2.62143 1.53034 2.68674 0.44202 25 - -
43338 1.38629 1.38629 1.38629 1.38629
43339 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43340 26 0.13465 3.43679 2.83851 3.34386 26 - -
43341 1.38629 1.38629 1.38629 1.38629
43342 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43343 27 3.49812 0.12271 3.54478 2.87609 27 - -
43344 1.38629 1.38629 1.38629 1.38629
43345 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43346 28 3.49812 0.12271 3.54478 2.87609 28 - -
43347 1.38629 1.38629 1.38629 1.38629
43348 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43349 29 3.49812 0.12271 3.54478 2.87609 29 - -
43350 1.38629 1.38629 1.38629 1.38629
43351 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43352 30 2.98656 3.64479 0.11111 3.55546 30 - -
43353 1.38629 1.38629 1.38629 1.38629
43354 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43355 31 3.49812 0.12271 3.54478 2.87609 31 - -
43356 1.38629 1.38629 1.38629 1.38629
43357 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43358 32 3.14603 2.63161 3.19198 0.16969 32 - -
43359 1.38629 1.38629 1.38629 1.38629
43360 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43361 33 2.98656 3.64479 0.11111 3.55546 33 - -
43362 1.38629 1.38629 1.38629 1.38629
43363 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43364 34 0.13465 3.43679 2.83851 3.34386 34 - -
43365 1.38629 1.38629 1.38629 1.38629
43366 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43367 35 0.13465 3.43679 2.83851 3.34386 35 - -
43368 1.38629 1.38629 1.38629 1.38629
43369 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43370 36 3.49812 0.12271 3.54478 2.87609 36 - -
43371 1.38629 1.38629 1.38629 1.38629
43372 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43373 37 3.14603 2.63161 3.19198 0.16969 37 - -
43374 1.38629 1.38629 1.38629 1.38629
43375 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43376 38 3.14603 2.63161 3.19198 0.16969 38 - -
43377 1.38629 1.38629 1.38629 1.38629
43378 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43379 39 0.13465 3.43679 2.83851 3.34386 39 - -
43380 1.38629 1.38629 1.38629 1.38629
43381 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43382 40 0.13465 3.43679 2.83851 3.34386 40 - -
43383 1.38629 1.38629 1.38629 1.38629
43384 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43385 41 2.98656 3.64479 0.11111 3.55546 41 - -
43386 1.38629 1.38629 1.38629 1.38629
43387 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43388 42 3.49812 0.12271 3.54478 2.87609 42 - -
43389 1.38629 1.38629 1.38629 1.38629
43390 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43391 43 0.13465 3.43679 2.83851 3.34386 43 - -
43392 1.38629 1.38629 1.38629 1.38629
43393 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43394 44 3.14603 2.63161 3.19198 0.16969 44 - -
43395 1.38629 1.38629 1.38629 1.38629
43396 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547
43397 45 0.13465 3.43679 2.83851 3.34386 45 - -
43398 1.38629 1.38629 1.38629 1.38629
43399 0.01800 4.02618 * 1.46634 0.26236 0.00000 *
43400 //
43401 HMMER3/b [3.0 | March 2010]
43402 NAME 4_LSU_Metazoa_4_LSU_start_fourb_long
43403 LENG 45
43404 ALPH DNA
43405 RF no
43406 CS no
43407 MAP yes
43408 DATE Mon Feb 27 22:50:04 2012
43409 NSEQ 3
43410 EFFN 3.000000
43411 CKSUM 1737265017
43412 STATS LOCAL MSV -7.9324 0.72043
43413 STATS LOCAL VITERBI -7.8211 0.72043
43414 STATS LOCAL FORWARD -3.8393 0.72043
43415 HMM A C G T
43416 m->m m->i m->d i->m i->i d->m d->d
43417 COMPO 1.22596 1.26330 1.69225 1.42836
43418 1.38629 1.38629 1.38629 1.38629
43419 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
43420 1 2.97980 2.52563 3.03204 0.19727 1 - -
43421 1.38629 1.38629 1.38629 1.38629
43422 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43423 2 2.97980 2.52563 3.03204 0.19727 2 - -
43424 1.38629 1.38629 1.38629 1.38629
43425 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43426 3 2.97980 2.52563 3.03204 0.19727 3 - -
43427 1.38629 1.38629 1.38629 1.38629
43428 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43429 4 3.30705 0.14631 3.36166 2.73626 4 - -
43430 1.38629 1.38629 1.38629 1.38629
43431 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43432 5 2.86982 3.47591 0.13017 3.36931 5 - -
43433 1.38629 1.38629 1.38629 1.38629
43434 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43435 6 0.15719 3.27118 2.73043 3.16274 6 - -
43436 1.38629 1.38629 1.38629 1.38629
43437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43438 7 3.30705 0.14631 3.36166 2.73626 7 - -
43439 1.38629 1.38629 1.38629 1.38629
43440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43441 8 3.30705 0.14631 3.36166 2.73626 8 - -
43442 1.38629 1.38629 1.38629 1.38629
43443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43444 9 2.97980 2.52563 3.03204 0.19727 9 - -
43445 1.38629 1.38629 1.38629 1.38629
43446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43447 10 2.86982 3.47591 0.13017 3.36931 10 - -
43448 1.38629 1.38629 1.38629 1.38629
43449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43450 11 0.15719 3.27118 2.73043 3.16274 11 - -
43451 1.38629 1.38629 1.38629 1.38629
43452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43453 12 0.15719 3.27118 2.73043 3.16274 12 - -
43454 1.38629 1.38629 1.38629 1.38629
43455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43456 13 3.30705 0.14631 3.36166 2.73626 13 - -
43457 1.38629 1.38629 1.38629 1.38629
43458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43459 14 2.97980 2.52563 3.03204 0.19727 14 - -
43460 1.38629 1.38629 1.38629 1.38629
43461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43462 15 3.30705 0.14631 3.36166 2.73626 15 - -
43463 1.38629 1.38629 1.38629 1.38629
43464 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43465 16 0.15719 3.27118 2.73043 3.16274 16 - -
43466 1.38629 1.38629 1.38629 1.38629
43467 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43468 17 2.86982 3.47591 0.13017 3.36931 17 - -
43469 1.38629 1.38629 1.38629 1.38629
43470 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43471 18 0.15719 3.27118 2.73043 3.16274 18 - -
43472 1.38629 1.38629 1.38629 1.38629
43473 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43474 19 3.30705 0.14631 3.36166 2.73626 19 - -
43475 1.38629 1.38629 1.38629 1.38629
43476 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43477 20 0.15719 3.27118 2.73043 3.16274 20 - -
43478 1.38629 1.38629 1.38629 1.38629
43479 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43480 21 2.97980 2.52563 3.03204 0.19727 21 - -
43481 1.38629 1.38629 1.38629 1.38629
43482 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43483 22 2.86982 3.47591 0.13017 3.36931 22 - -
43484 1.38629 1.38629 1.38629 1.38629
43485 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43486 23 0.15719 3.27118 2.73043 3.16274 23 - -
43487 1.38629 1.38629 1.38629 1.38629
43488 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43489 24 3.30705 0.14631 3.36166 2.73626 24 - -
43490 1.38629 1.38629 1.38629 1.38629
43491 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43492 25 2.97980 2.52563 3.03204 0.19727 25 - -
43493 1.38629 1.38629 1.38629 1.38629
43494 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43495 26 0.15719 3.27118 2.73043 3.16274 26 - -
43496 1.38629 1.38629 1.38629 1.38629
43497 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43498 27 3.30705 0.14631 3.36166 2.73626 27 - -
43499 1.38629 1.38629 1.38629 1.38629
43500 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43501 28 3.30705 0.14631 3.36166 2.73626 28 - -
43502 1.38629 1.38629 1.38629 1.38629
43503 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43504 29 3.30705 0.14631 3.36166 2.73626 29 - -
43505 1.38629 1.38629 1.38629 1.38629
43506 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43507 30 2.86982 3.47591 0.13017 3.36931 30 - -
43508 1.38629 1.38629 1.38629 1.38629
43509 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43510 31 3.30705 0.14631 3.36166 2.73626 31 - -
43511 1.38629 1.38629 1.38629 1.38629
43512 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43513 32 2.97980 2.52563 3.03204 0.19727 32 - -
43514 1.38629 1.38629 1.38629 1.38629
43515 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43516 33 2.86982 3.47591 0.13017 3.36931 33 - -
43517 1.38629 1.38629 1.38629 1.38629
43518 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43519 34 0.15719 3.27118 2.73043 3.16274 34 - -
43520 1.38629 1.38629 1.38629 1.38629
43521 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43522 35 0.15719 3.27118 2.73043 3.16274 35 - -
43523 1.38629 1.38629 1.38629 1.38629
43524 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43525 36 3.30705 0.14631 3.36166 2.73626 36 - -
43526 1.38629 1.38629 1.38629 1.38629
43527 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43528 37 2.97980 2.52563 3.03204 0.19727 37 - -
43529 1.38629 1.38629 1.38629 1.38629
43530 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43531 38 2.97980 2.52563 3.03204 0.19727 38 - -
43532 1.38629 1.38629 1.38629 1.38629
43533 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43534 39 0.15719 3.27118 2.73043 3.16274 39 - -
43535 1.38629 1.38629 1.38629 1.38629
43536 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43537 40 0.15719 3.27118 2.73043 3.16274 40 - -
43538 1.38629 1.38629 1.38629 1.38629
43539 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43540 41 2.86982 3.47591 0.13017 3.36931 41 - -
43541 1.38629 1.38629 1.38629 1.38629
43542 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43543 42 3.30705 0.14631 3.36166 2.73626 42 - -
43544 1.38629 1.38629 1.38629 1.38629
43545 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43546 43 0.15719 3.27118 2.73043 3.16274 43 - -
43547 1.38629 1.38629 1.38629 1.38629
43548 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43549 44 2.97980 2.52563 3.03204 0.19727 44 - -
43550 1.38629 1.38629 1.38629 1.38629
43551 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
43552 45 0.15719 3.27118 2.73043 3.16274 45 - -
43553 1.38629 1.38629 1.38629 1.38629
43554 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
43555 //
43556 HMMER3/b [3.0 | March 2010]
43557 NAME 4_LSU_Metazoa_4_LSU_start_fourc_long
43558 LENG 45
43559 ALPH DNA
43560 RF no
43561 CS no
43562 MAP yes
43563 DATE Mon Feb 27 22:50:12 2012
43564 NSEQ 12
43565 EFFN 3.524414
43566 CKSUM 2964998357
43567 STATS LOCAL MSV -7.5619 0.71932
43568 STATS LOCAL VITERBI -7.8274 0.71932
43569 STATS LOCAL FORWARD -4.3051 0.71932
43570 HMM A C G T
43571 m->m m->i m->d i->m i->i d->m d->d
43572 COMPO 1.27870 1.36878 1.61837 1.31318
43573 1.38629 1.38629 1.38629 1.38629
43574 0.03556 4.04733 4.04733 1.46634 0.26236 0.00000 *
43575 1 3.15211 2.63547 3.19782 0.16877 1 - -
43576 1.38629 1.38629 1.38629 1.38629
43577 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43578 2 3.15211 2.63547 3.19782 0.16877 2 - -
43579 1.38629 1.38629 1.38629 1.38629
43580 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43581 3 3.15211 2.63547 3.19782 0.16877 3 - -
43582 1.38629 1.38629 1.38629 1.38629
43583 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43584 4 2.62700 1.53267 2.69220 0.44003 4 - -
43585 1.38629 1.38629 1.38629 1.38629
43586 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43587 5 2.99061 3.65075 0.11049 3.56205 5 - -
43588 1.38629 1.38629 1.38629 1.38629
43589 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43590 6 0.13392 3.44273 2.84235 3.35037 6 - -
43591 1.38629 1.38629 1.38629 1.38629
43592 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43593 7 3.50494 0.12196 3.55129 2.88100 7 - -
43594 1.38629 1.38629 1.38629 1.38629
43595 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43596 8 3.50494 0.12196 3.55129 2.88100 8 - -
43597 1.38629 1.38629 1.38629 1.38629
43598 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43599 9 3.15211 2.63547 3.19782 0.16877 9 - -
43600 1.38629 1.38629 1.38629 1.38629
43601 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43602 10 2.99061 3.65075 0.11049 3.56205 10 - -
43603 1.38629 1.38629 1.38629 1.38629
43604 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43605 11 0.13392 3.44273 2.84235 3.35037 11 - -
43606 1.38629 1.38629 1.38629 1.38629
43607 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43608 12 0.13392 3.44273 2.84235 3.35037 12 - -
43609 1.38629 1.38629 1.38629 1.38629
43610 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43611 13 3.50494 0.12196 3.55129 2.88100 13 - -
43612 1.38629 1.38629 1.38629 1.38629
43613 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43614 14 3.15211 2.63547 3.19782 0.16877 14 - -
43615 1.38629 1.38629 1.38629 1.38629
43616 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43617 15 3.50494 0.12196 3.55129 2.88100 15 - -
43618 1.38629 1.38629 1.38629 1.38629
43619 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43620 16 0.13392 3.44273 2.84235 3.35037 16 - -
43621 1.38629 1.38629 1.38629 1.38629
43622 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43623 17 1.96046 3.06086 0.27540 2.93570 17 - -
43624 1.38629 1.38629 1.38629 1.38629
43625 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43626 18 0.29933 2.95963 1.90905 2.83659 18 - -
43627 1.38629 1.38629 1.38629 1.38629
43628 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43629 19 3.50494 0.12196 3.55129 2.88100 19 - -
43630 1.38629 1.38629 1.38629 1.38629
43631 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43632 20 2.99061 3.65075 0.11049 3.56205 20 - -
43633 1.38629 1.38629 1.38629 1.38629
43634 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43635 21 3.15211 2.63547 3.19782 0.16877 21 - -
43636 1.38629 1.38629 1.38629 1.38629
43637 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43638 22 2.99061 3.65075 0.11049 3.56205 22 - -
43639 1.38629 1.38629 1.38629 1.38629
43640 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43641 23 0.13392 3.44273 2.84235 3.35037 23 - -
43642 1.38629 1.38629 1.38629 1.38629
43643 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43644 24 3.15211 2.63547 3.19782 0.16877 24 - -
43645 1.38629 1.38629 1.38629 1.38629
43646 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43647 25 3.15211 2.63547 3.19782 0.16877 25 - -
43648 1.38629 1.38629 1.38629 1.38629
43649 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43650 26 0.13392 3.44273 2.84235 3.35037 26 - -
43651 1.38629 1.38629 1.38629 1.38629
43652 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43653 27 3.50494 0.12196 3.55129 2.88100 27 - -
43654 1.38629 1.38629 1.38629 1.38629
43655 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43656 28 3.50494 0.12196 3.55129 2.88100 28 - -
43657 1.38629 1.38629 1.38629 1.38629
43658 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43659 29 3.50494 0.12196 3.55129 2.88100 29 - -
43660 1.38629 1.38629 1.38629 1.38629
43661 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43662 30 2.99061 3.65075 0.11049 3.56205 30 - -
43663 1.38629 1.38629 1.38629 1.38629
43664 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43665 31 3.50494 0.12196 3.55129 2.88100 31 - -
43666 1.38629 1.38629 1.38629 1.38629
43667 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43668 32 3.15211 2.63547 3.19782 0.16877 32 - -
43669 1.38629 1.38629 1.38629 1.38629
43670 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43671 33 2.99061 3.65075 0.11049 3.56205 33 - -
43672 1.38629 1.38629 1.38629 1.38629
43673 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43674 34 0.13392 3.44273 2.84235 3.35037 34 - -
43675 1.38629 1.38629 1.38629 1.38629
43676 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43677 35 0.13392 3.44273 2.84235 3.35037 35 - -
43678 1.38629 1.38629 1.38629 1.38629
43679 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43680 36 3.50494 0.12196 3.55129 2.88100 36 - -
43681 1.38629 1.38629 1.38629 1.38629
43682 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43683 37 3.15211 2.63547 3.19782 0.16877 37 - -
43684 1.38629 1.38629 1.38629 1.38629
43685 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43686 38 3.15211 2.63547 3.19782 0.16877 38 - -
43687 1.38629 1.38629 1.38629 1.38629
43688 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43689 39 0.13392 3.44273 2.84235 3.35037 39 - -
43690 1.38629 1.38629 1.38629 1.38629
43691 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43692 40 0.13392 3.44273 2.84235 3.35037 40 - -
43693 1.38629 1.38629 1.38629 1.38629
43694 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43695 41 2.99061 3.65075 0.11049 3.56205 41 - -
43696 1.38629 1.38629 1.38629 1.38629
43697 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43698 42 3.50494 0.12196 3.55129 2.88100 42 - -
43699 1.38629 1.38629 1.38629 1.38629
43700 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43701 43 0.13392 3.44273 2.84235 3.35037 43 - -
43702 1.38629 1.38629 1.38629 1.38629
43703 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43704 44 3.15211 2.63547 3.19782 0.16877 44 - -
43705 1.38629 1.38629 1.38629 1.38629
43706 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547
43707 45 0.13392 3.44273 2.84235 3.35037 45 - -
43708 1.38629 1.38629 1.38629 1.38629
43709 0.01794 4.02970 * 1.46634 0.26236 0.00000 *
43710 //
43711 HMMER3/b [3.0 | March 2010]
43712 NAME 4_LSU_Metazoa_4_LSU_start_fourd_long
43713 LENG 45
43714 ALPH DNA
43715 RF no
43716 CS no
43717 MAP yes
43718 DATE Mon Feb 27 22:50:19 2012
43719 NSEQ 2
43720 EFFN 2.000000
43721 CKSUM 2411741823
43722 STATS LOCAL MSV -7.4996 0.72813
43723 STATS LOCAL VITERBI -8.2421 0.72813
43724 STATS LOCAL FORWARD -3.5693 0.72813
43725 HMM A C G T
43726 m->m m->i m->d i->m i->i d->m d->d
43727 COMPO 1.29173 1.34306 1.49811 1.42459
43728 1.38629 1.38629 1.38629 1.38629
43729 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
43730 1 2.57915 2.25909 2.64442 0.28946 1 - -
43731 1.38629 1.38629 1.38629 1.38629
43732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43733 2 2.57915 2.25909 2.64442 0.28946 2 - -
43734 1.38629 1.38629 1.38629 1.38629
43735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43736 3 2.53331 3.02441 0.20344 2.88069 3 - -
43737 1.38629 1.38629 1.38629 1.38629
43738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43739 4 2.57915 2.25909 2.64442 0.28946 4 - -
43740 1.38629 1.38629 1.38629 1.38629
43741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43742 5 2.53331 3.02441 0.20344 2.88069 5 - -
43743 1.38629 1.38629 1.38629 1.38629
43744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43745 6 0.23862 2.84929 2.43386 2.70756 6 - -
43746 1.38629 1.38629 1.38629 1.38629
43747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43748 7 2.81865 0.23582 2.88868 2.35662 7 - -
43749 1.38629 1.38629 1.38629 1.38629
43750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43751 8 2.81865 0.23582 2.88868 2.35662 8 - -
43752 1.38629 1.38629 1.38629 1.38629
43753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43754 9 2.57915 2.25909 2.64442 0.28946 9 - -
43755 1.38629 1.38629 1.38629 1.38629
43756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43757 10 2.53331 3.02441 0.20344 2.88069 10 - -
43758 1.38629 1.38629 1.38629 1.38629
43759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43760 11 0.23862 2.84929 2.43386 2.70756 11 - -
43761 1.38629 1.38629 1.38629 1.38629
43762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43763 12 0.23862 2.84929 2.43386 2.70756 12 - -
43764 1.38629 1.38629 1.38629 1.38629
43765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43766 13 2.81865 0.23582 2.88868 2.35662 13 - -
43767 1.38629 1.38629 1.38629 1.38629
43768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43769 14 2.57915 2.25909 2.64442 0.28946 14 - -
43770 1.38629 1.38629 1.38629 1.38629
43771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43772 15 2.81865 0.23582 2.88868 2.35662 15 - -
43773 1.38629 1.38629 1.38629 1.38629
43774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43775 16 0.23862 2.84929 2.43386 2.70756 16 - -
43776 1.38629 1.38629 1.38629 1.38629
43777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43778 17 2.53331 3.02441 0.20344 2.88069 17 - -
43779 1.38629 1.38629 1.38629 1.38629
43780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43781 18 0.23862 2.84929 2.43386 2.70756 18 - -
43782 1.38629 1.38629 1.38629 1.38629
43783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43784 19 2.81865 0.23582 2.88868 2.35662 19 - -
43785 1.38629 1.38629 1.38629 1.38629
43786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43787 20 2.53331 3.02441 0.20344 2.88069 20 - -
43788 1.38629 1.38629 1.38629 1.38629
43789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43790 21 2.57915 2.25909 2.64442 0.28946 21 - -
43791 1.38629 1.38629 1.38629 1.38629
43792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43793 22 2.53331 3.02441 0.20344 2.88069 22 - -
43794 1.38629 1.38629 1.38629 1.38629
43795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43796 23 0.23862 2.84929 2.43386 2.70756 23 - -
43797 1.38629 1.38629 1.38629 1.38629
43798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43799 24 2.57915 2.25909 2.64442 0.28946 24 - -
43800 1.38629 1.38629 1.38629 1.38629
43801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43802 25 2.81865 0.23582 2.88868 2.35662 25 - -
43803 1.38629 1.38629 1.38629 1.38629
43804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43805 26 0.23862 2.84929 2.43386 2.70756 26 - -
43806 1.38629 1.38629 1.38629 1.38629
43807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43808 27 2.81865 0.23582 2.88868 2.35662 27 - -
43809 1.38629 1.38629 1.38629 1.38629
43810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43811 28 2.81865 0.23582 2.88868 2.35662 28 - -
43812 1.38629 1.38629 1.38629 1.38629
43813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43814 29 2.81865 0.23582 2.88868 2.35662 29 - -
43815 1.38629 1.38629 1.38629 1.38629
43816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43817 30 2.53331 3.02441 0.20344 2.88069 30 - -
43818 1.38629 1.38629 1.38629 1.38629
43819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43820 31 2.81865 0.23582 2.88868 2.35662 31 - -
43821 1.38629 1.38629 1.38629 1.38629
43822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43823 32 2.57915 2.25909 2.64442 0.28946 32 - -
43824 1.38629 1.38629 1.38629 1.38629
43825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43826 33 2.53331 3.02441 0.20344 2.88069 33 - -
43827 1.38629 1.38629 1.38629 1.38629
43828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43829 34 0.23862 2.84929 2.43386 2.70756 34 - -
43830 1.38629 1.38629 1.38629 1.38629
43831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43832 35 0.23862 2.84929 2.43386 2.70756 35 - -
43833 1.38629 1.38629 1.38629 1.38629
43834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43835 36 2.81865 0.23582 2.88868 2.35662 36 - -
43836 1.38629 1.38629 1.38629 1.38629
43837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43838 37 2.57915 2.25909 2.64442 0.28946 37 - -
43839 1.38629 1.38629 1.38629 1.38629
43840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43841 38 2.57915 2.25909 2.64442 0.28946 38 - -
43842 1.38629 1.38629 1.38629 1.38629
43843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43844 39 0.23862 2.84929 2.43386 2.70756 39 - -
43845 1.38629 1.38629 1.38629 1.38629
43846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43847 40 0.23862 2.84929 2.43386 2.70756 40 - -
43848 1.38629 1.38629 1.38629 1.38629
43849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43850 41 2.53331 3.02441 0.20344 2.88069 41 - -
43851 1.38629 1.38629 1.38629 1.38629
43852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43853 42 2.81865 0.23582 2.88868 2.35662 42 - -
43854 1.38629 1.38629 1.38629 1.38629
43855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43856 43 0.23862 2.84929 2.43386 2.70756 43 - -
43857 1.38629 1.38629 1.38629 1.38629
43858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43859 44 2.57915 2.25909 2.64442 0.28946 44 - -
43860 1.38629 1.38629 1.38629 1.38629
43861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
43862 45 0.23862 2.84929 2.43386 2.70756 45 - -
43863 1.38629 1.38629 1.38629 1.38629
43864 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
43865 //
43866 HMMER3/b [3.0 | March 2010]
43867 NAME 4_LSU_Metazoa_4_LSU_start_foure_long
43868 LENG 45
43869 ALPH DNA
43870 RF no
43871 CS no
43872 MAP yes
43873 DATE Mon Feb 27 22:50:27 2012
43874 NSEQ 9
43875 EFFN 3.555176
43876 CKSUM 2325224462
43877 STATS LOCAL MSV -7.6336 0.71932
43878 STATS LOCAL VITERBI -7.6152 0.71932
43879 STATS LOCAL FORWARD -4.2181 0.71932
43880 HMM A C G T
43881 m->m m->i m->d i->m i->i d->m d->d
43882 COMPO 1.29437 1.30759 1.70004 1.29908
43883 1.38629 1.38629 1.38629 1.38629
43884 0.03537 4.05268 4.05268 1.46634 0.26236 0.00000 *
43885 1 3.16150 2.64143 3.20685 0.16736 1 - -
43886 1.38629 1.38629 1.38629 1.38629
43887 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43888 2 1.60524 2.26043 2.40622 0.50303 2 - -
43889 1.38629 1.38629 1.38629 1.38629
43890 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43891 3 3.16150 2.64143 3.20685 0.16736 3 - -
43892 1.38629 1.38629 1.38629 1.38629
43893 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43894 4 3.16150 2.64143 3.20685 0.16736 4 - -
43895 1.38629 1.38629 1.38629 1.38629
43896 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43897 5 2.99686 3.65992 0.10956 3.57220 5 - -
43898 1.38629 1.38629 1.38629 1.38629
43899 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43900 6 0.13279 3.45189 2.84825 3.36042 6 - -
43901 1.38629 1.38629 1.38629 1.38629
43902 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43903 7 3.51544 0.12080 3.56134 2.88856 7 - -
43904 1.38629 1.38629 1.38629 1.38629
43905 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43906 8 3.51544 0.12080 3.56134 2.88856 8 - -
43907 1.38629 1.38629 1.38629 1.38629
43908 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43909 9 3.16150 2.64143 3.20685 0.16736 9 - -
43910 1.38629 1.38629 1.38629 1.38629
43911 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43912 10 3.51544 0.12080 3.56134 2.88856 10 - -
43913 1.38629 1.38629 1.38629 1.38629
43914 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43915 11 0.13279 3.45189 2.84825 3.36042 11 - -
43916 1.38629 1.38629 1.38629 1.38629
43917 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43918 12 0.13279 3.45189 2.84825 3.36042 12 - -
43919 1.38629 1.38629 1.38629 1.38629
43920 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43921 13 3.51544 0.12080 3.56134 2.88856 13 - -
43922 1.38629 1.38629 1.38629 1.38629
43923 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43924 14 3.16150 2.64143 3.20685 0.16736 14 - -
43925 1.38629 1.38629 1.38629 1.38629
43926 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43927 15 3.51544 0.12080 3.56134 2.88856 15 - -
43928 1.38629 1.38629 1.38629 1.38629
43929 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43930 16 0.13279 3.45189 2.84825 3.36042 16 - -
43931 1.38629 1.38629 1.38629 1.38629
43932 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43933 17 2.99686 3.65992 0.10956 3.57220 17 - -
43934 1.38629 1.38629 1.38629 1.38629
43935 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43936 18 3.16150 2.64143 3.20685 0.16736 18 - -
43937 1.38629 1.38629 1.38629 1.38629
43938 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43939 19 3.51544 0.12080 3.56134 2.88856 19 - -
43940 1.38629 1.38629 1.38629 1.38629
43941 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43942 20 2.99686 3.65992 0.10956 3.57220 20 - -
43943 1.38629 1.38629 1.38629 1.38629
43944 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43945 21 0.67646 2.27465 2.22456 1.27069 21 - -
43946 1.38629 1.38629 1.38629 1.38629
43947 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43948 22 2.99686 3.65992 0.10956 3.57220 22 - -
43949 1.38629 1.38629 1.38629 1.38629
43950 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43951 23 0.13279 3.45189 2.84825 3.36042 23 - -
43952 1.38629 1.38629 1.38629 1.38629
43953 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43954 24 3.16150 2.64143 3.20685 0.16736 24 - -
43955 1.38629 1.38629 1.38629 1.38629
43956 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43957 25 3.16150 2.64143 3.20685 0.16736 25 - -
43958 1.38629 1.38629 1.38629 1.38629
43959 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43960 26 0.13279 3.45189 2.84825 3.36042 26 - -
43961 1.38629 1.38629 1.38629 1.38629
43962 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43963 27 3.51544 0.12080 3.56134 2.88856 27 - -
43964 1.38629 1.38629 1.38629 1.38629
43965 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43966 28 3.51544 0.12080 3.56134 2.88856 28 - -
43967 1.38629 1.38629 1.38629 1.38629
43968 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43969 29 3.51544 0.12080 3.56134 2.88856 29 - -
43970 1.38629 1.38629 1.38629 1.38629
43971 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43972 30 2.99686 3.65992 0.10956 3.57220 30 - -
43973 1.38629 1.38629 1.38629 1.38629
43974 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43975 31 3.51544 0.12080 3.56134 2.88856 31 - -
43976 1.38629 1.38629 1.38629 1.38629
43977 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43978 32 3.16150 2.64143 3.20685 0.16736 32 - -
43979 1.38629 1.38629 1.38629 1.38629
43980 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43981 33 2.99686 3.65992 0.10956 3.57220 33 - -
43982 1.38629 1.38629 1.38629 1.38629
43983 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43984 34 0.13279 3.45189 2.84825 3.36042 34 - -
43985 1.38629 1.38629 1.38629 1.38629
43986 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43987 35 0.13279 3.45189 2.84825 3.36042 35 - -
43988 1.38629 1.38629 1.38629 1.38629
43989 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43990 36 3.51544 0.12080 3.56134 2.88856 36 - -
43991 1.38629 1.38629 1.38629 1.38629
43992 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43993 37 3.16150 2.64143 3.20685 0.16736 37 - -
43994 1.38629 1.38629 1.38629 1.38629
43995 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43996 38 3.16150 2.64143 3.20685 0.16736 38 - -
43997 1.38629 1.38629 1.38629 1.38629
43998 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
43999 39 0.13279 3.45189 2.84825 3.36042 39 - -
44000 1.38629 1.38629 1.38629 1.38629
44001 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
44002 40 0.13279 3.45189 2.84825 3.36042 40 - -
44003 1.38629 1.38629 1.38629 1.38629
44004 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
44005 41 2.99686 3.65992 0.10956 3.57220 41 - -
44006 1.38629 1.38629 1.38629 1.38629
44007 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
44008 42 3.51544 0.12080 3.56134 2.88856 42 - -
44009 1.38629 1.38629 1.38629 1.38629
44010 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
44011 43 0.13279 3.45189 2.84825 3.36042 43 - -
44012 1.38629 1.38629 1.38629 1.38629
44013 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
44014 44 3.16150 2.64143 3.20685 0.16736 44 - -
44015 1.38629 1.38629 1.38629 1.38629
44016 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547
44017 45 0.13279 3.45189 2.84825 3.36042 45 - -
44018 1.38629 1.38629 1.38629 1.38629
44019 0.01784 4.03516 * 1.46634 0.26236 0.00000 *
44020 //
44021 HMMER3/b [3.0 | March 2010]
44022 NAME 4_LSU_Metazoa_4_LSU_start_fourf_long
44023 LENG 45
44024 ALPH DNA
44025 RF no
44026 CS no
44027 MAP yes
44028 DATE Mon Feb 27 22:50:34 2012
44029 NSEQ 4
44030 EFFN 3.191406
44031 CKSUM 3539407318
44032 STATS LOCAL MSV -7.9359 0.71933
44033 STATS LOCAL VITERBI -7.6471 0.71933
44034 STATS LOCAL FORWARD -4.1152 0.71933
44035 HMM A C G T
44036 m->m m->i m->d i->m i->i d->m d->d
44037 COMPO 1.22385 1.20875 1.52623 1.66084
44038 1.38629 1.38629 1.38629 1.38629
44039 0.03780 3.98739 3.98739 1.46634 0.26236 0.00000 *
44040 1 3.38354 0.13628 3.43507 2.79277 1 - -
44041 1.38629 1.38629 1.38629 1.38629
44042 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44043 2 2.91732 3.54398 0.12206 3.44415 2 - -
44044 1.38629 1.38629 1.38629 1.38629
44045 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44046 3 3.38354 0.13628 3.43507 2.79277 3 - -
44047 1.38629 1.38629 1.38629 1.38629
44048 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44049 4 3.38354 0.13628 3.43507 2.79277 4 - -
44050 1.38629 1.38629 1.38629 1.38629
44051 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44052 5 2.91732 3.54398 0.12206 3.44415 5 - -
44053 1.38629 1.38629 1.38629 1.38629
44054 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44055 6 0.14770 3.33730 2.77393 3.23493 6 - -
44056 1.38629 1.38629 1.38629 1.38629
44057 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44058 7 3.38354 0.13628 3.43507 2.79277 7 - -
44059 1.38629 1.38629 1.38629 1.38629
44060 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44061 8 3.38354 0.13628 3.43507 2.79277 8 - -
44062 1.38629 1.38629 1.38629 1.38629
44063 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44064 9 3.04545 2.56765 3.09524 0.18579 9 - -
44065 1.38629 1.38629 1.38629 1.38629
44066 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44067 10 3.38354 0.13628 3.43507 2.79277 10 - -
44068 1.38629 1.38629 1.38629 1.38629
44069 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44070 11 0.14770 3.33730 2.77393 3.23493 11 - -
44071 1.38629 1.38629 1.38629 1.38629
44072 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44073 12 2.91732 3.54398 0.12206 3.44415 12 - -
44074 1.38629 1.38629 1.38629 1.38629
44075 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44076 13 0.14770 3.33730 2.77393 3.23493 13 - -
44077 1.38629 1.38629 1.38629 1.38629
44078 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44079 14 3.04545 2.56765 3.09524 0.18579 14 - -
44080 1.38629 1.38629 1.38629 1.38629
44081 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44082 15 3.38354 0.13628 3.43507 2.79277 15 - -
44083 1.38629 1.38629 1.38629 1.38629
44084 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44085 16 0.14770 3.33730 2.77393 3.23493 16 - -
44086 1.38629 1.38629 1.38629 1.38629
44087 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44088 17 2.91732 3.54398 0.12206 3.44415 17 - -
44089 1.38629 1.38629 1.38629 1.38629
44090 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44091 18 2.91732 3.54398 0.12206 3.44415 18 - -
44092 1.38629 1.38629 1.38629 1.38629
44093 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44094 19 3.04545 2.56765 3.09524 0.18579 19 - -
44095 1.38629 1.38629 1.38629 1.38629
44096 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44097 20 0.14770 3.33730 2.77393 3.23493 20 - -
44098 1.38629 1.38629 1.38629 1.38629
44099 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44100 21 0.14770 3.33730 2.77393 3.23493 21 - -
44101 1.38629 1.38629 1.38629 1.38629
44102 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44103 22 2.91732 3.54398 0.12206 3.44415 22 - -
44104 1.38629 1.38629 1.38629 1.38629
44105 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44106 23 0.14770 3.33730 2.77393 3.23493 23 - -
44107 1.38629 1.38629 1.38629 1.38629
44108 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44109 24 3.38354 0.13628 3.43507 2.79277 24 - -
44110 1.38629 1.38629 1.38629 1.38629
44111 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44112 25 3.04545 2.56765 3.09524 0.18579 25 - -
44113 1.38629 1.38629 1.38629 1.38629
44114 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44115 26 0.14770 3.33730 2.77393 3.23493 26 - -
44116 1.38629 1.38629 1.38629 1.38629
44117 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44118 27 3.38354 0.13628 3.43507 2.79277 27 - -
44119 1.38629 1.38629 1.38629 1.38629
44120 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44121 28 3.38354 0.13628 3.43507 2.79277 28 - -
44122 1.38629 1.38629 1.38629 1.38629
44123 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44124 29 3.38354 0.13628 3.43507 2.79277 29 - -
44125 1.38629 1.38629 1.38629 1.38629
44126 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44127 30 2.91732 3.54398 0.12206 3.44415 30 - -
44128 1.38629 1.38629 1.38629 1.38629
44129 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44130 31 3.38354 0.13628 3.43507 2.79277 31 - -
44131 1.38629 1.38629 1.38629 1.38629
44132 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44133 32 3.04545 2.56765 3.09524 0.18579 32 - -
44134 1.38629 1.38629 1.38629 1.38629
44135 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44136 33 2.91732 3.54398 0.12206 3.44415 33 - -
44137 1.38629 1.38629 1.38629 1.38629
44138 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44139 34 0.14770 3.33730 2.77393 3.23493 34 - -
44140 1.38629 1.38629 1.38629 1.38629
44141 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44142 35 0.14770 3.33730 2.77393 3.23493 35 - -
44143 1.38629 1.38629 1.38629 1.38629
44144 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44145 36 3.38354 0.13628 3.43507 2.79277 36 - -
44146 1.38629 1.38629 1.38629 1.38629
44147 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44148 37 3.04545 2.56765 3.09524 0.18579 37 - -
44149 1.38629 1.38629 1.38629 1.38629
44150 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44151 38 3.04545 2.56765 3.09524 0.18579 38 - -
44152 1.38629 1.38629 1.38629 1.38629
44153 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44154 39 0.14770 3.33730 2.77393 3.23493 39 - -
44155 1.38629 1.38629 1.38629 1.38629
44156 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44157 40 0.14770 3.33730 2.77393 3.23493 40 - -
44158 1.38629 1.38629 1.38629 1.38629
44159 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44160 41 2.91732 3.54398 0.12206 3.44415 41 - -
44161 1.38629 1.38629 1.38629 1.38629
44162 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44163 42 3.38354 0.13628 3.43507 2.79277 42 - -
44164 1.38629 1.38629 1.38629 1.38629
44165 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44166 43 0.14770 3.33730 2.77393 3.23493 43 - -
44167 1.38629 1.38629 1.38629 1.38629
44168 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44169 44 3.04545 2.56765 3.09524 0.18579 44 - -
44170 1.38629 1.38629 1.38629 1.38629
44171 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
44172 45 0.14770 3.33730 2.77393 3.23493 45 - -
44173 1.38629 1.38629 1.38629 1.38629
44174 0.01908 3.96867 * 1.46634 0.26236 0.00000 *
44175 //
44176 HMMER3/b [3.0 | March 2010]
44177 NAME 4_LSU_Metazoa_4_LSU_start_fourg_long
44178 LENG 45
44179 ALPH DNA
44180 RF no
44181 CS no
44182 MAP yes
44183 DATE Mon Feb 27 22:50:42 2012
44184 NSEQ 4
44185 EFFN 3.222656
44186 CKSUM 3193793341
44187 STATS LOCAL MSV -8.0374 0.71931
44188 STATS LOCAL VITERBI -7.7274 0.71931
44189 STATS LOCAL FORWARD -4.1558 0.71931
44190 HMM A C G T
44191 m->m m->i m->d i->m i->i d->m d->d
44192 COMPO 1.34230 1.26497 1.45321 1.50198
44193 1.38629 1.38629 1.38629 1.38629
44194 0.03758 3.99317 3.99317 1.46634 0.26236 0.00000 *
44195 1 3.05586 2.57429 3.10526 0.18405 1 - -
44196 1.38629 1.38629 1.38629 1.38629
44197 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44198 2 3.05586 2.57429 3.10526 0.18405 2 - -
44199 1.38629 1.38629 1.38629 1.38629
44200 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44201 3 2.92468 3.55461 0.12085 3.45586 3 - -
44202 1.38629 1.38629 1.38629 1.38629
44203 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44204 4 3.39555 0.13478 3.44658 2.80157 4 - -
44205 1.38629 1.38629 1.38629 1.38629
44206 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44207 5 0.14627 3.34770 2.78072 3.24630 5 - -
44208 1.38629 1.38629 1.38629 1.38629
44209 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44210 6 0.14627 3.34770 2.78072 3.24630 6 - -
44211 1.38629 1.38629 1.38629 1.38629
44212 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44213 7 3.39555 0.13478 3.44658 2.80157 7 - -
44214 1.38629 1.38629 1.38629 1.38629
44215 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44216 8 3.39555 0.13478 3.44658 2.80157 8 - -
44217 1.38629 1.38629 1.38629 1.38629
44218 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44219 9 3.05586 2.57429 3.10526 0.18405 9 - -
44220 1.38629 1.38629 1.38629 1.38629
44221 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44222 10 2.92468 3.55461 0.12085 3.45586 10 - -
44223 1.38629 1.38629 1.38629 1.38629
44224 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44225 11 0.14627 3.34770 2.78072 3.24630 11 - -
44226 1.38629 1.38629 1.38629 1.38629
44227 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44228 12 2.92468 3.55461 0.12085 3.45586 12 - -
44229 1.38629 1.38629 1.38629 1.38629
44230 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44231 13 3.39555 0.13478 3.44658 2.80157 13 - -
44232 1.38629 1.38629 1.38629 1.38629
44233 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44234 14 3.05586 2.57429 3.10526 0.18405 14 - -
44235 1.38629 1.38629 1.38629 1.38629
44236 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44237 15 3.39555 0.13478 3.44658 2.80157 15 - -
44238 1.38629 1.38629 1.38629 1.38629
44239 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44240 16 0.14627 3.34770 2.78072 3.24630 16 - -
44241 1.38629 1.38629 1.38629 1.38629
44242 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44243 17 2.92468 3.55461 0.12085 3.45586 17 - -
44244 1.38629 1.38629 1.38629 1.38629
44245 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44246 18 2.92468 3.55461 0.12085 3.45586 18 - -
44247 1.38629 1.38629 1.38629 1.38629
44248 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44249 19 3.39555 0.13478 3.44658 2.80157 19 - -
44250 1.38629 1.38629 1.38629 1.38629
44251 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44252 20 2.92468 3.55461 0.12085 3.45586 20 - -
44253 1.38629 1.38629 1.38629 1.38629
44254 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44255 21 3.05586 2.57429 3.10526 0.18405 21 - -
44256 1.38629 1.38629 1.38629 1.38629
44257 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44258 22 2.92468 3.55461 0.12085 3.45586 22 - -
44259 1.38629 1.38629 1.38629 1.38629
44260 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44261 23 0.14627 3.34770 2.78072 3.24630 23 - -
44262 1.38629 1.38629 1.38629 1.38629
44263 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44264 24 3.39555 0.13478 3.44658 2.80157 24 - -
44265 1.38629 1.38629 1.38629 1.38629
44266 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44267 25 3.05586 2.57429 3.10526 0.18405 25 - -
44268 1.38629 1.38629 1.38629 1.38629
44269 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44270 26 0.14627 3.34770 2.78072 3.24630 26 - -
44271 1.38629 1.38629 1.38629 1.38629
44272 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44273 27 3.39555 0.13478 3.44658 2.80157 27 - -
44274 1.38629 1.38629 1.38629 1.38629
44275 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44276 28 3.39555 0.13478 3.44658 2.80157 28 - -
44277 1.38629 1.38629 1.38629 1.38629
44278 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44279 29 3.39555 0.13478 3.44658 2.80157 29 - -
44280 1.38629 1.38629 1.38629 1.38629
44281 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44282 30 2.92468 3.55461 0.12085 3.45586 30 - -
44283 1.38629 1.38629 1.38629 1.38629
44284 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44285 31 3.39555 0.13478 3.44658 2.80157 31 - -
44286 1.38629 1.38629 1.38629 1.38629
44287 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44288 32 3.05586 2.57429 3.10526 0.18405 32 - -
44289 1.38629 1.38629 1.38629 1.38629
44290 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44291 33 2.92468 3.55461 0.12085 3.45586 33 - -
44292 1.38629 1.38629 1.38629 1.38629
44293 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44294 34 0.14627 3.34770 2.78072 3.24630 34 - -
44295 1.38629 1.38629 1.38629 1.38629
44296 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44297 35 0.14627 3.34770 2.78072 3.24630 35 - -
44298 1.38629 1.38629 1.38629 1.38629
44299 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44300 36 3.39555 0.13478 3.44658 2.80157 36 - -
44301 1.38629 1.38629 1.38629 1.38629
44302 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44303 37 3.05586 2.57429 3.10526 0.18405 37 - -
44304 1.38629 1.38629 1.38629 1.38629
44305 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44306 38 3.05586 2.57429 3.10526 0.18405 38 - -
44307 1.38629 1.38629 1.38629 1.38629
44308 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44309 39 0.14627 3.34770 2.78072 3.24630 39 - -
44310 1.38629 1.38629 1.38629 1.38629
44311 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44312 40 0.14627 3.34770 2.78072 3.24630 40 - -
44313 1.38629 1.38629 1.38629 1.38629
44314 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44315 41 2.92468 3.55461 0.12085 3.45586 41 - -
44316 1.38629 1.38629 1.38629 1.38629
44317 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44318 42 3.39555 0.13478 3.44658 2.80157 42 - -
44319 1.38629 1.38629 1.38629 1.38629
44320 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44321 43 0.14627 3.34770 2.78072 3.24630 43 - -
44322 1.38629 1.38629 1.38629 1.38629
44323 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44324 44 3.05586 2.57429 3.10526 0.18405 44 - -
44325 1.38629 1.38629 1.38629 1.38629
44326 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
44327 45 0.14627 3.34770 2.78072 3.24630 45 - -
44328 1.38629 1.38629 1.38629 1.38629
44329 0.01897 3.97456 * 1.46634 0.26236 0.00000 *
44330 //
44331 HMMER3/b [3.0 | March 2010]
44332 NAME 4_LSU_Metazoa_4_LSU_start_fourh_long
44333 LENG 45
44334 ALPH DNA
44335 RF no
44336 CS no
44337 MAP yes
44338 DATE Mon Feb 27 22:50:49 2012
44339 NSEQ 5
44340 EFFN 3.618164
44341 CKSUM 1272895122
44342 STATS LOCAL MSV -7.8380 0.71931
44343 STATS LOCAL VITERBI -7.5794 0.71931
44344 STATS LOCAL FORWARD -4.2052 0.71931
44345 HMM A C G T
44346 m->m m->i m->d i->m i->i d->m d->d
44347 COMPO 1.35166 1.37041 1.65451 1.21739
44348 1.38629 1.38629 1.38629 1.38629
44349 0.03498 4.06357 4.06357 1.46634 0.26236 0.00000 *
44350 1 0.78521 2.22532 2.20420 1.12207 1 - -
44351 1.38629 1.38629 1.38629 1.38629
44352 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44353 2 3.18050 2.65347 3.22511 0.16455 2 - -
44354 1.38629 1.38629 1.38629 1.38629
44355 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44356 3 3.18050 2.65347 3.22511 0.16455 3 - -
44357 1.38629 1.38629 1.38629 1.38629
44358 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44359 4 3.18050 2.65347 3.22511 0.16455 4 - -
44360 1.38629 1.38629 1.38629 1.38629
44361 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44362 5 3.00938 3.67836 0.10771 3.59263 5 - -
44363 1.38629 1.38629 1.38629 1.38629
44364 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44365 6 0.13055 3.47036 2.86015 3.38070 6 - -
44366 1.38629 1.38629 1.38629 1.38629
44367 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44368 7 3.53660 0.11852 3.58156 2.90375 7 - -
44369 1.38629 1.38629 1.38629 1.38629
44370 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44371 8 3.53660 0.11852 3.58156 2.90375 8 - -
44372 1.38629 1.38629 1.38629 1.38629
44373 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44374 9 3.18050 2.65347 3.22511 0.16455 9 - -
44375 1.38629 1.38629 1.38629 1.38629
44376 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44377 10 3.53660 0.11852 3.58156 2.90375 10 - -
44378 1.38629 1.38629 1.38629 1.38629
44379 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44380 11 0.13055 3.47036 2.86015 3.38070 11 - -
44381 1.38629 1.38629 1.38629 1.38629
44382 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44383 12 1.13075 2.61649 0.65419 2.47353 12 - -
44384 1.38629 1.38629 1.38629 1.38629
44385 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44386 13 3.53660 0.11852 3.58156 2.90375 13 - -
44387 1.38629 1.38629 1.38629 1.38629
44388 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44389 14 3.18050 2.65347 3.22511 0.16455 14 - -
44390 1.38629 1.38629 1.38629 1.38629
44391 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44392 15 3.53660 0.11852 3.58156 2.90375 15 - -
44393 1.38629 1.38629 1.38629 1.38629
44394 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44395 16 0.13055 3.47036 2.86015 3.38070 16 - -
44396 1.38629 1.38629 1.38629 1.38629
44397 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44398 17 3.00938 3.67836 0.10771 3.59263 17 - -
44399 1.38629 1.38629 1.38629 1.38629
44400 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44401 18 3.18050 2.65347 3.22511 0.16455 18 - -
44402 1.38629 1.38629 1.38629 1.38629
44403 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44404 19 3.53660 0.11852 3.58156 2.90375 19 - -
44405 1.38629 1.38629 1.38629 1.38629
44406 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44407 20 3.00938 3.67836 0.10771 3.59263 20 - -
44408 1.38629 1.38629 1.38629 1.38629
44409 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44410 21 3.18050 2.65347 3.22511 0.16455 21 - -
44411 1.38629 1.38629 1.38629 1.38629
44412 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44413 22 3.00938 3.67836 0.10771 3.59263 22 - -
44414 1.38629 1.38629 1.38629 1.38629
44415 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44416 23 0.13055 3.47036 2.86015 3.38070 23 - -
44417 1.38629 1.38629 1.38629 1.38629
44418 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44419 24 3.18050 2.65347 3.22511 0.16455 24 - -
44420 1.38629 1.38629 1.38629 1.38629
44421 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44422 25 3.18050 2.65347 3.22511 0.16455 25 - -
44423 1.38629 1.38629 1.38629 1.38629
44424 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44425 26 0.13055 3.47036 2.86015 3.38070 26 - -
44426 1.38629 1.38629 1.38629 1.38629
44427 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44428 27 3.53660 0.11852 3.58156 2.90375 27 - -
44429 1.38629 1.38629 1.38629 1.38629
44430 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44431 28 3.53660 0.11852 3.58156 2.90375 28 - -
44432 1.38629 1.38629 1.38629 1.38629
44433 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44434 29 3.53660 0.11852 3.58156 2.90375 29 - -
44435 1.38629 1.38629 1.38629 1.38629
44436 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44437 30 3.00938 3.67836 0.10771 3.59263 30 - -
44438 1.38629 1.38629 1.38629 1.38629
44439 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44440 31 3.53660 0.11852 3.58156 2.90375 31 - -
44441 1.38629 1.38629 1.38629 1.38629
44442 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44443 32 3.18050 2.65347 3.22511 0.16455 32 - -
44444 1.38629 1.38629 1.38629 1.38629
44445 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44446 33 3.00938 3.67836 0.10771 3.59263 33 - -
44447 1.38629 1.38629 1.38629 1.38629
44448 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44449 34 0.13055 3.47036 2.86015 3.38070 34 - -
44450 1.38629 1.38629 1.38629 1.38629
44451 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44452 35 0.13055 3.47036 2.86015 3.38070 35 - -
44453 1.38629 1.38629 1.38629 1.38629
44454 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44455 36 3.18050 2.65347 3.22511 0.16455 36 - -
44456 1.38629 1.38629 1.38629 1.38629
44457 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44458 37 3.18050 2.65347 3.22511 0.16455 37 - -
44459 1.38629 1.38629 1.38629 1.38629
44460 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44461 38 3.18050 2.65347 3.22511 0.16455 38 - -
44462 1.38629 1.38629 1.38629 1.38629
44463 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44464 39 0.13055 3.47036 2.86015 3.38070 39 - -
44465 1.38629 1.38629 1.38629 1.38629
44466 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44467 40 0.13055 3.47036 2.86015 3.38070 40 - -
44468 1.38629 1.38629 1.38629 1.38629
44469 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44470 41 3.00938 3.67836 0.10771 3.59263 41 - -
44471 1.38629 1.38629 1.38629 1.38629
44472 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44473 42 3.53660 0.11852 3.58156 2.90375 42 - -
44474 1.38629 1.38629 1.38629 1.38629
44475 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44476 43 0.13055 3.47036 2.86015 3.38070 43 - -
44477 1.38629 1.38629 1.38629 1.38629
44478 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44479 44 3.18050 2.65347 3.22511 0.16455 44 - -
44480 1.38629 1.38629 1.38629 1.38629
44481 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547
44482 45 0.13055 3.47036 2.86015 3.38070 45 - -
44483 1.38629 1.38629 1.38629 1.38629
44484 0.01764 4.04623 * 1.46634 0.26236 0.00000 *
44485 //
44486 HMMER3/b [3.0 | March 2010]
44487 NAME 4_LSU_Metazoa_4_LSU_start_fouri_long
44488 LENG 45
44489 ALPH DNA
44490 RF no
44491 CS no
44492 MAP yes
44493 DATE Mon Feb 27 22:50:55 2012
44494 NSEQ 8
44495 EFFN 3.214844
44496 CKSUM 1186784676
44497 STATS LOCAL MSV -8.2425 0.71931
44498 STATS LOCAL VITERBI -7.6389 0.71931
44499 STATS LOCAL FORWARD -4.1147 0.71931
44500 HMM A C G T
44501 m->m m->i m->d i->m i->i d->m d->d
44502 COMPO 1.11464 1.26796 1.60640 1.66097
44503 1.38629 1.38629 1.38629 1.38629
44504 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 *
44505 1 3.39256 0.13515 3.44371 2.79938 1 - -
44506 1.38629 1.38629 1.38629 1.38629
44507 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44508 2 3.05326 2.57263 3.10276 0.18448 2 - -
44509 1.38629 1.38629 1.38629 1.38629
44510 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44511 3 0.14663 3.34511 2.77903 3.24347 3 - -
44512 1.38629 1.38629 1.38629 1.38629
44513 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44514 4 3.39256 0.13515 3.44371 2.79938 4 - -
44515 1.38629 1.38629 1.38629 1.38629
44516 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44517 5 2.92285 3.55196 0.12115 3.45295 5 - -
44518 1.38629 1.38629 1.38629 1.38629
44519 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44520 6 0.14663 3.34511 2.77903 3.24347 6 - -
44521 1.38629 1.38629 1.38629 1.38629
44522 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44523 7 3.39256 0.13515 3.44371 2.79938 7 - -
44524 1.38629 1.38629 1.38629 1.38629
44525 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44526 8 3.39256 0.13515 3.44371 2.79938 8 - -
44527 1.38629 1.38629 1.38629 1.38629
44528 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44529 9 3.05326 2.57263 3.10276 0.18448 9 - -
44530 1.38629 1.38629 1.38629 1.38629
44531 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44532 10 3.39256 0.13515 3.44371 2.79938 10 - -
44533 1.38629 1.38629 1.38629 1.38629
44534 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44535 11 0.14663 3.34511 2.77903 3.24347 11 - -
44536 1.38629 1.38629 1.38629 1.38629
44537 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44538 12 2.92285 3.55196 0.12115 3.45295 12 - -
44539 1.38629 1.38629 1.38629 1.38629
44540 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44541 13 0.14663 3.34511 2.77903 3.24347 13 - -
44542 1.38629 1.38629 1.38629 1.38629
44543 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44544 14 3.05326 2.57263 3.10276 0.18448 14 - -
44545 1.38629 1.38629 1.38629 1.38629
44546 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44547 15 3.39256 0.13515 3.44371 2.79938 15 - -
44548 1.38629 1.38629 1.38629 1.38629
44549 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44550 16 0.14663 3.34511 2.77903 3.24347 16 - -
44551 1.38629 1.38629 1.38629 1.38629
44552 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44553 17 2.92285 3.55196 0.12115 3.45295 17 - -
44554 1.38629 1.38629 1.38629 1.38629
44555 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44556 18 0.14663 3.34511 2.77903 3.24347 18 - -
44557 1.38629 1.38629 1.38629 1.38629
44558 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44559 19 3.39256 0.13515 3.44371 2.79938 19 - -
44560 1.38629 1.38629 1.38629 1.38629
44561 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44562 20 2.92285 3.55196 0.12115 3.45295 20 - -
44563 1.38629 1.38629 1.38629 1.38629
44564 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44565 21 0.14663 3.34511 2.77903 3.24347 21 - -
44566 1.38629 1.38629 1.38629 1.38629
44567 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44568 22 2.92285 3.55196 0.12115 3.45295 22 - -
44569 1.38629 1.38629 1.38629 1.38629
44570 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44571 23 0.14663 3.34511 2.77903 3.24347 23 - -
44572 1.38629 1.38629 1.38629 1.38629
44573 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44574 24 3.39256 0.13515 3.44371 2.79938 24 - -
44575 1.38629 1.38629 1.38629 1.38629
44576 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44577 25 0.14663 3.34511 2.77903 3.24347 25 - -
44578 1.38629 1.38629 1.38629 1.38629
44579 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44580 26 0.14663 3.34511 2.77903 3.24347 26 - -
44581 1.38629 1.38629 1.38629 1.38629
44582 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44583 27 3.39256 0.13515 3.44371 2.79938 27 - -
44584 1.38629 1.38629 1.38629 1.38629
44585 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44586 28 3.39256 0.13515 3.44371 2.79938 28 - -
44587 1.38629 1.38629 1.38629 1.38629
44588 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44589 29 3.39256 0.13515 3.44371 2.79938 29 - -
44590 1.38629 1.38629 1.38629 1.38629
44591 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44592 30 2.92285 3.55196 0.12115 3.45295 30 - -
44593 1.38629 1.38629 1.38629 1.38629
44594 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44595 31 3.39256 0.13515 3.44371 2.79938 31 - -
44596 1.38629 1.38629 1.38629 1.38629
44597 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44598 32 3.05326 2.57263 3.10276 0.18448 32 - -
44599 1.38629 1.38629 1.38629 1.38629
44600 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44601 33 2.92285 3.55196 0.12115 3.45295 33 - -
44602 1.38629 1.38629 1.38629 1.38629
44603 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44604 34 0.14663 3.34511 2.77903 3.24347 34 - -
44605 1.38629 1.38629 1.38629 1.38629
44606 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44607 35 0.14663 3.34511 2.77903 3.24347 35 - -
44608 1.38629 1.38629 1.38629 1.38629
44609 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44610 36 3.05326 2.57263 3.10276 0.18448 36 - -
44611 1.38629 1.38629 1.38629 1.38629
44612 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44613 37 3.05326 2.57263 3.10276 0.18448 37 - -
44614 1.38629 1.38629 1.38629 1.38629
44615 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44616 38 3.05326 2.57263 3.10276 0.18448 38 - -
44617 1.38629 1.38629 1.38629 1.38629
44618 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44619 39 0.14663 3.34511 2.77903 3.24347 39 - -
44620 1.38629 1.38629 1.38629 1.38629
44621 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44622 40 0.14663 3.34511 2.77903 3.24347 40 - -
44623 1.38629 1.38629 1.38629 1.38629
44624 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44625 41 2.92285 3.55196 0.12115 3.45295 41 - -
44626 1.38629 1.38629 1.38629 1.38629
44627 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44628 42 3.39256 0.13515 3.44371 2.79938 42 - -
44629 1.38629 1.38629 1.38629 1.38629
44630 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44631 43 0.14663 3.34511 2.77903 3.24347 43 - -
44632 1.38629 1.38629 1.38629 1.38629
44633 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44634 44 3.05326 2.57263 3.10276 0.18448 44 - -
44635 1.38629 1.38629 1.38629 1.38629
44636 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
44637 45 0.14663 3.34511 2.77903 3.24347 45 - -
44638 1.38629 1.38629 1.38629 1.38629
44639 0.01899 3.97309 * 1.46634 0.26236 0.00000 *
44640 //
44641 HMMER3/b [3.0 | March 2010]
44642 NAME 4_LSU_Metazoa_4_LSU_start_fourj_long
44643 LENG 45
44644 ALPH DNA
44645 RF no
44646 CS no
44647 MAP yes
44648 DATE Mon Feb 27 22:51:02 2012
44649 NSEQ 3
44650 EFFN 3.000000
44651 CKSUM 2351947980
44652 STATS LOCAL MSV -8.2579 0.72001
44653 STATS LOCAL VITERBI -7.8277 0.72001
44654 STATS LOCAL FORWARD -4.0042 0.72001
44655 HMM A C G T
44656 m->m m->i m->d i->m i->i d->m d->d
44657 COMPO 1.16841 1.27582 1.44578 1.74654
44658 1.38629 1.38629 1.38629 1.38629
44659 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
44660 1 0.15719 3.27118 2.73043 3.16274 1 - -
44661 1.38629 1.38629 1.38629 1.38629
44662 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44663 2 3.30705 0.14631 3.36166 2.73626 2 - -
44664 1.38629 1.38629 1.38629 1.38629
44665 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44666 3 2.86982 3.47591 0.13017 3.36931 3 - -
44667 1.38629 1.38629 1.38629 1.38629
44668 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44669 4 3.30705 0.14631 3.36166 2.73626 4 - -
44670 1.38629 1.38629 1.38629 1.38629
44671 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44672 5 2.86982 3.47591 0.13017 3.36931 5 - -
44673 1.38629 1.38629 1.38629 1.38629
44674 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44675 6 0.15719 3.27118 2.73043 3.16274 6 - -
44676 1.38629 1.38629 1.38629 1.38629
44677 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44678 7 3.30705 0.14631 3.36166 2.73626 7 - -
44679 1.38629 1.38629 1.38629 1.38629
44680 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44681 8 3.30705 0.14631 3.36166 2.73626 8 - -
44682 1.38629 1.38629 1.38629 1.38629
44683 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44684 9 2.97980 2.52563 3.03204 0.19727 9 - -
44685 1.38629 1.38629 1.38629 1.38629
44686 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44687 10 3.30705 0.14631 3.36166 2.73626 10 - -
44688 1.38629 1.38629 1.38629 1.38629
44689 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44690 11 0.15719 3.27118 2.73043 3.16274 11 - -
44691 1.38629 1.38629 1.38629 1.38629
44692 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44693 12 2.86982 3.47591 0.13017 3.36931 12 - -
44694 1.38629 1.38629 1.38629 1.38629
44695 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44696 13 0.15719 3.27118 2.73043 3.16274 13 - -
44697 1.38629 1.38629 1.38629 1.38629
44698 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44699 14 2.97980 2.52563 3.03204 0.19727 14 - -
44700 1.38629 1.38629 1.38629 1.38629
44701 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44702 15 3.30705 0.14631 3.36166 2.73626 15 - -
44703 1.38629 1.38629 1.38629 1.38629
44704 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44705 16 0.15719 3.27118 2.73043 3.16274 16 - -
44706 1.38629 1.38629 1.38629 1.38629
44707 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44708 17 2.86982 3.47591 0.13017 3.36931 17 - -
44709 1.38629 1.38629 1.38629 1.38629
44710 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44711 18 0.15719 3.27118 2.73043 3.16274 18 - -
44712 1.38629 1.38629 1.38629 1.38629
44713 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44714 19 3.30705 0.14631 3.36166 2.73626 19 - -
44715 1.38629 1.38629 1.38629 1.38629
44716 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44717 20 2.86982 3.47591 0.13017 3.36931 20 - -
44718 1.38629 1.38629 1.38629 1.38629
44719 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44720 21 0.15719 3.27118 2.73043 3.16274 21 - -
44721 1.38629 1.38629 1.38629 1.38629
44722 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44723 22 2.86982 3.47591 0.13017 3.36931 22 - -
44724 1.38629 1.38629 1.38629 1.38629
44725 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44726 23 0.15719 3.27118 2.73043 3.16274 23 - -
44727 1.38629 1.38629 1.38629 1.38629
44728 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44729 24 3.30705 0.14631 3.36166 2.73626 24 - -
44730 1.38629 1.38629 1.38629 1.38629
44731 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44732 25 2.86982 3.47591 0.13017 3.36931 25 - -
44733 1.38629 1.38629 1.38629 1.38629
44734 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44735 26 0.15719 3.27118 2.73043 3.16274 26 - -
44736 1.38629 1.38629 1.38629 1.38629
44737 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44738 27 3.30705 0.14631 3.36166 2.73626 27 - -
44739 1.38629 1.38629 1.38629 1.38629
44740 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44741 28 3.30705 0.14631 3.36166 2.73626 28 - -
44742 1.38629 1.38629 1.38629 1.38629
44743 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44744 29 3.30705 0.14631 3.36166 2.73626 29 - -
44745 1.38629 1.38629 1.38629 1.38629
44746 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44747 30 2.86982 3.47591 0.13017 3.36931 30 - -
44748 1.38629 1.38629 1.38629 1.38629
44749 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44750 31 3.30705 0.14631 3.36166 2.73626 31 - -
44751 1.38629 1.38629 1.38629 1.38629
44752 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44753 32 2.97980 2.52563 3.03204 0.19727 32 - -
44754 1.38629 1.38629 1.38629 1.38629
44755 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44756 33 2.86982 3.47591 0.13017 3.36931 33 - -
44757 1.38629 1.38629 1.38629 1.38629
44758 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44759 34 0.15719 3.27118 2.73043 3.16274 34 - -
44760 1.38629 1.38629 1.38629 1.38629
44761 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44762 35 0.15719 3.27118 2.73043 3.16274 35 - -
44763 1.38629 1.38629 1.38629 1.38629
44764 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44765 36 2.97980 2.52563 3.03204 0.19727 36 - -
44766 1.38629 1.38629 1.38629 1.38629
44767 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44768 37 2.97980 2.52563 3.03204 0.19727 37 - -
44769 1.38629 1.38629 1.38629 1.38629
44770 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44771 38 2.97980 2.52563 3.03204 0.19727 38 - -
44772 1.38629 1.38629 1.38629 1.38629
44773 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44774 39 0.15719 3.27118 2.73043 3.16274 39 - -
44775 1.38629 1.38629 1.38629 1.38629
44776 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44777 40 0.15719 3.27118 2.73043 3.16274 40 - -
44778 1.38629 1.38629 1.38629 1.38629
44779 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44780 41 2.86982 3.47591 0.13017 3.36931 41 - -
44781 1.38629 1.38629 1.38629 1.38629
44782 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44783 42 3.30705 0.14631 3.36166 2.73626 42 - -
44784 1.38629 1.38629 1.38629 1.38629
44785 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44786 43 0.15719 3.27118 2.73043 3.16274 43 - -
44787 1.38629 1.38629 1.38629 1.38629
44788 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44789 44 2.97980 2.52563 3.03204 0.19727 44 - -
44790 1.38629 1.38629 1.38629 1.38629
44791 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44792 45 0.15719 3.27118 2.73043 3.16274 45 - -
44793 1.38629 1.38629 1.38629 1.38629
44794 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
44795 //
44796 HMMER3/b [3.0 | March 2010]
44797 NAME 4_LSU_Metazoa_4_LSU_start_fourk_long
44798 LENG 45
44799 ALPH DNA
44800 RF no
44801 CS no
44802 MAP yes
44803 DATE Mon Feb 27 22:51:10 2012
44804 NSEQ 3
44805 EFFN 3.000000
44806 CKSUM 4061155062
44807 STATS LOCAL MSV -8.1678 0.72014
44808 STATS LOCAL VITERBI -7.7322 0.72014
44809 STATS LOCAL FORWARD -3.9807 0.72014
44810 HMM A C G T
44811 m->m m->i m->d i->m i->i d->m d->d
44812 COMPO 1.28224 1.27007 1.44862 1.57562
44813 1.38629 1.38629 1.38629 1.38629
44814 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
44815 1 2.97980 2.52563 3.03204 0.19727 1 - -
44816 1.38629 1.38629 1.38629 1.38629
44817 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44818 2 2.86982 3.47591 0.13017 3.36931 2 - -
44819 1.38629 1.38629 1.38629 1.38629
44820 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44821 3 3.30705 0.14631 3.36166 2.73626 3 - -
44822 1.38629 1.38629 1.38629 1.38629
44823 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44824 4 3.30705 0.14631 3.36166 2.73626 4 - -
44825 1.38629 1.38629 1.38629 1.38629
44826 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44827 5 2.97980 2.52563 3.03204 0.19727 5 - -
44828 1.38629 1.38629 1.38629 1.38629
44829 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44830 6 0.15719 3.27118 2.73043 3.16274 6 - -
44831 1.38629 1.38629 1.38629 1.38629
44832 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44833 7 3.30705 0.14631 3.36166 2.73626 7 - -
44834 1.38629 1.38629 1.38629 1.38629
44835 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44836 8 3.30705 0.14631 3.36166 2.73626 8 - -
44837 1.38629 1.38629 1.38629 1.38629
44838 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44839 9 2.97980 2.52563 3.03204 0.19727 9 - -
44840 1.38629 1.38629 1.38629 1.38629
44841 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44842 10 3.30705 0.14631 3.36166 2.73626 10 - -
44843 1.38629 1.38629 1.38629 1.38629
44844 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44845 11 0.15719 3.27118 2.73043 3.16274 11 - -
44846 1.38629 1.38629 1.38629 1.38629
44847 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44848 12 2.86982 3.47591 0.13017 3.36931 12 - -
44849 1.38629 1.38629 1.38629 1.38629
44850 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44851 13 0.15719 3.27118 2.73043 3.16274 13 - -
44852 1.38629 1.38629 1.38629 1.38629
44853 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44854 14 2.86982 3.47591 0.13017 3.36931 14 - -
44855 1.38629 1.38629 1.38629 1.38629
44856 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44857 15 3.30705 0.14631 3.36166 2.73626 15 - -
44858 1.38629 1.38629 1.38629 1.38629
44859 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44860 16 0.15719 3.27118 2.73043 3.16274 16 - -
44861 1.38629 1.38629 1.38629 1.38629
44862 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44863 17 2.86982 3.47591 0.13017 3.36931 17 - -
44864 1.38629 1.38629 1.38629 1.38629
44865 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44866 18 2.86982 3.47591 0.13017 3.36931 18 - -
44867 1.38629 1.38629 1.38629 1.38629
44868 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44869 19 3.30705 0.14631 3.36166 2.73626 19 - -
44870 1.38629 1.38629 1.38629 1.38629
44871 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44872 20 2.86982 3.47591 0.13017 3.36931 20 - -
44873 1.38629 1.38629 1.38629 1.38629
44874 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44875 21 0.15719 3.27118 2.73043 3.16274 21 - -
44876 1.38629 1.38629 1.38629 1.38629
44877 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44878 22 2.86982 3.47591 0.13017 3.36931 22 - -
44879 1.38629 1.38629 1.38629 1.38629
44880 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44881 23 0.15719 3.27118 2.73043 3.16274 23 - -
44882 1.38629 1.38629 1.38629 1.38629
44883 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44884 24 2.97980 2.52563 3.03204 0.19727 24 - -
44885 1.38629 1.38629 1.38629 1.38629
44886 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44887 25 3.30705 0.14631 3.36166 2.73626 25 - -
44888 1.38629 1.38629 1.38629 1.38629
44889 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44890 26 0.15719 3.27118 2.73043 3.16274 26 - -
44891 1.38629 1.38629 1.38629 1.38629
44892 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44893 27 3.30705 0.14631 3.36166 2.73626 27 - -
44894 1.38629 1.38629 1.38629 1.38629
44895 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44896 28 3.30705 0.14631 3.36166 2.73626 28 - -
44897 1.38629 1.38629 1.38629 1.38629
44898 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44899 29 3.30705 0.14631 3.36166 2.73626 29 - -
44900 1.38629 1.38629 1.38629 1.38629
44901 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44902 30 2.86982 3.47591 0.13017 3.36931 30 - -
44903 1.38629 1.38629 1.38629 1.38629
44904 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44905 31 3.30705 0.14631 3.36166 2.73626 31 - -
44906 1.38629 1.38629 1.38629 1.38629
44907 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44908 32 2.97980 2.52563 3.03204 0.19727 32 - -
44909 1.38629 1.38629 1.38629 1.38629
44910 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44911 33 2.86982 3.47591 0.13017 3.36931 33 - -
44912 1.38629 1.38629 1.38629 1.38629
44913 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44914 34 0.15719 3.27118 2.73043 3.16274 34 - -
44915 1.38629 1.38629 1.38629 1.38629
44916 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44917 35 0.15719 3.27118 2.73043 3.16274 35 - -
44918 1.38629 1.38629 1.38629 1.38629
44919 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44920 36 2.97980 2.52563 3.03204 0.19727 36 - -
44921 1.38629 1.38629 1.38629 1.38629
44922 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44923 37 2.97980 2.52563 3.03204 0.19727 37 - -
44924 1.38629 1.38629 1.38629 1.38629
44925 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44926 38 2.97980 2.52563 3.03204 0.19727 38 - -
44927 1.38629 1.38629 1.38629 1.38629
44928 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44929 39 0.15719 3.27118 2.73043 3.16274 39 - -
44930 1.38629 1.38629 1.38629 1.38629
44931 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44932 40 0.15719 3.27118 2.73043 3.16274 40 - -
44933 1.38629 1.38629 1.38629 1.38629
44934 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44935 41 2.86982 3.47591 0.13017 3.36931 41 - -
44936 1.38629 1.38629 1.38629 1.38629
44937 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44938 42 3.30705 0.14631 3.36166 2.73626 42 - -
44939 1.38629 1.38629 1.38629 1.38629
44940 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44941 43 0.15719 3.27118 2.73043 3.16274 43 - -
44942 1.38629 1.38629 1.38629 1.38629
44943 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44944 44 2.97980 2.52563 3.03204 0.19727 44 - -
44945 1.38629 1.38629 1.38629 1.38629
44946 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44947 45 0.15719 3.27118 2.73043 3.16274 45 - -
44948 1.38629 1.38629 1.38629 1.38629
44949 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
44950 //
44951 HMMER3/b [3.0 | March 2010]
44952 NAME 4_LSU_Metazoa_4_LSU_start_fourl_long
44953 LENG 45
44954 ALPH DNA
44955 RF no
44956 CS no
44957 MAP yes
44958 DATE Mon Feb 27 22:51:16 2012
44959 NSEQ 3
44960 EFFN 3.000000
44961 CKSUM 292764534
44962 STATS LOCAL MSV -8.1090 0.72071
44963 STATS LOCAL VITERBI -7.7116 0.72071
44964 STATS LOCAL FORWARD -4.0241 0.72071
44965 HMM A C G T
44966 m->m m->i m->d i->m i->i d->m d->d
44967 COMPO 1.22065 1.35244 1.51762 1.48228
44968 1.38629 1.38629 1.38629 1.38629
44969 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
44970 1 3.30705 0.14631 3.36166 2.73626 1 - -
44971 1.38629 1.38629 1.38629 1.38629
44972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44973 2 2.97980 2.52563 3.03204 0.19727 2 - -
44974 1.38629 1.38629 1.38629 1.38629
44975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44976 3 2.97980 2.52563 3.03204 0.19727 3 - -
44977 1.38629 1.38629 1.38629 1.38629
44978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44979 4 3.30705 0.14631 3.36166 2.73626 4 - -
44980 1.38629 1.38629 1.38629 1.38629
44981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44982 5 2.86982 3.47591 0.13017 3.36931 5 - -
44983 1.38629 1.38629 1.38629 1.38629
44984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44985 6 0.15719 3.27118 2.73043 3.16274 6 - -
44986 1.38629 1.38629 1.38629 1.38629
44987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44988 7 3.30705 0.14631 3.36166 2.73626 7 - -
44989 1.38629 1.38629 1.38629 1.38629
44990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44991 8 3.30705 0.14631 3.36166 2.73626 8 - -
44992 1.38629 1.38629 1.38629 1.38629
44993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44994 9 2.97980 2.52563 3.03204 0.19727 9 - -
44995 1.38629 1.38629 1.38629 1.38629
44996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
44997 10 2.86982 3.47591 0.13017 3.36931 10 - -
44998 1.38629 1.38629 1.38629 1.38629
44999 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45000 11 0.15719 3.27118 2.73043 3.16274 11 - -
45001 1.38629 1.38629 1.38629 1.38629
45002 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45003 12 2.86982 3.47591 0.13017 3.36931 12 - -
45004 1.38629 1.38629 1.38629 1.38629
45005 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45006 13 0.15719 3.27118 2.73043 3.16274 13 - -
45007 1.38629 1.38629 1.38629 1.38629
45008 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45009 14 2.97980 2.52563 3.03204 0.19727 14 - -
45010 1.38629 1.38629 1.38629 1.38629
45011 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45012 15 3.30705 0.14631 3.36166 2.73626 15 - -
45013 1.38629 1.38629 1.38629 1.38629
45014 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45015 16 0.15719 3.27118 2.73043 3.16274 16 - -
45016 1.38629 1.38629 1.38629 1.38629
45017 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45018 17 2.86982 3.47591 0.13017 3.36931 17 - -
45019 1.38629 1.38629 1.38629 1.38629
45020 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45021 18 0.15719 3.27118 2.73043 3.16274 18 - -
45022 1.38629 1.38629 1.38629 1.38629
45023 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45024 19 3.30705 0.14631 3.36166 2.73626 19 - -
45025 1.38629 1.38629 1.38629 1.38629
45026 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45027 20 2.86982 3.47591 0.13017 3.36931 20 - -
45028 1.38629 1.38629 1.38629 1.38629
45029 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45030 21 0.15719 3.27118 2.73043 3.16274 21 - -
45031 1.38629 1.38629 1.38629 1.38629
45032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45033 22 2.86982 3.47591 0.13017 3.36931 22 - -
45034 1.38629 1.38629 1.38629 1.38629
45035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45036 23 0.15719 3.27118 2.73043 3.16274 23 - -
45037 1.38629 1.38629 1.38629 1.38629
45038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45039 24 2.97980 2.52563 3.03204 0.19727 24 - -
45040 1.38629 1.38629 1.38629 1.38629
45041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45042 25 2.97980 2.52563 3.03204 0.19727 25 - -
45043 1.38629 1.38629 1.38629 1.38629
45044 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45045 26 0.15719 3.27118 2.73043 3.16274 26 - -
45046 1.38629 1.38629 1.38629 1.38629
45047 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45048 27 3.30705 0.14631 3.36166 2.73626 27 - -
45049 1.38629 1.38629 1.38629 1.38629
45050 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45051 28 3.30705 0.14631 3.36166 2.73626 28 - -
45052 1.38629 1.38629 1.38629 1.38629
45053 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45054 29 3.30705 0.14631 3.36166 2.73626 29 - -
45055 1.38629 1.38629 1.38629 1.38629
45056 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45057 30 2.86982 3.47591 0.13017 3.36931 30 - -
45058 1.38629 1.38629 1.38629 1.38629
45059 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45060 31 3.30705 0.14631 3.36166 2.73626 31 - -
45061 1.38629 1.38629 1.38629 1.38629
45062 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45063 32 2.97980 2.52563 3.03204 0.19727 32 - -
45064 1.38629 1.38629 1.38629 1.38629
45065 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45066 33 2.86982 3.47591 0.13017 3.36931 33 - -
45067 1.38629 1.38629 1.38629 1.38629
45068 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45069 34 0.15719 3.27118 2.73043 3.16274 34 - -
45070 1.38629 1.38629 1.38629 1.38629
45071 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45072 35 0.15719 3.27118 2.73043 3.16274 35 - -
45073 1.38629 1.38629 1.38629 1.38629
45074 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45075 36 2.43223 0.62271 2.50508 1.22417 36 - -
45076 1.38629 1.38629 1.38629 1.38629
45077 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45078 37 2.97980 2.52563 3.03204 0.19727 37 - -
45079 1.38629 1.38629 1.38629 1.38629
45080 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45081 38 2.97980 2.52563 3.03204 0.19727 38 - -
45082 1.38629 1.38629 1.38629 1.38629
45083 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45084 39 0.15719 3.27118 2.73043 3.16274 39 - -
45085 1.38629 1.38629 1.38629 1.38629
45086 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45087 40 0.15719 3.27118 2.73043 3.16274 40 - -
45088 1.38629 1.38629 1.38629 1.38629
45089 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45090 41 2.86982 3.47591 0.13017 3.36931 41 - -
45091 1.38629 1.38629 1.38629 1.38629
45092 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45093 42 3.30705 0.14631 3.36166 2.73626 42 - -
45094 1.38629 1.38629 1.38629 1.38629
45095 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45096 43 0.15719 3.27118 2.73043 3.16274 43 - -
45097 1.38629 1.38629 1.38629 1.38629
45098 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45099 44 2.97980 2.52563 3.03204 0.19727 44 - -
45100 1.38629 1.38629 1.38629 1.38629
45101 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45102 45 0.15719 3.27118 2.73043 3.16274 45 - -
45103 1.38629 1.38629 1.38629 1.38629
45104 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
45105 //
45106 HMMER3/b [3.0 | March 2010]
45107 NAME 4_LSU_Metazoa_4_LSU_start_fourm_long
45108 LENG 45
45109 ALPH DNA
45110 RF no
45111 CS no
45112 MAP yes
45113 DATE Mon Feb 27 22:51:24 2012
45114 NSEQ 2
45115 EFFN 2.000000
45116 CKSUM 1681735314
45117 STATS LOCAL MSV -7.3397 0.72792
45118 STATS LOCAL VITERBI -8.2563 0.72792
45119 STATS LOCAL FORWARD -3.7770 0.72792
45120 HMM A C G T
45121 m->m m->i m->d i->m i->i d->m d->d
45122 COMPO 1.34610 1.29011 1.43454 1.48598
45123 1.38629 1.38629 1.38629 1.38629
45124 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
45125 1 2.53331 3.02441 0.20344 2.88069 1 - -
45126 1.38629 1.38629 1.38629 1.38629
45127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45128 2 2.81865 0.23582 2.88868 2.35662 2 - -
45129 1.38629 1.38629 1.38629 1.38629
45130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45131 3 2.81865 0.23582 2.88868 2.35662 3 - -
45132 1.38629 1.38629 1.38629 1.38629
45133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45134 4 2.57915 2.25909 2.64442 0.28946 4 - -
45135 1.38629 1.38629 1.38629 1.38629
45136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45137 5 2.53331 3.02441 0.20344 2.88069 5 - -
45138 1.38629 1.38629 1.38629 1.38629
45139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45140 6 0.23862 2.84929 2.43386 2.70756 6 - -
45141 1.38629 1.38629 1.38629 1.38629
45142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45143 7 2.81865 0.23582 2.88868 2.35662 7 - -
45144 1.38629 1.38629 1.38629 1.38629
45145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45146 8 2.81865 0.23582 2.88868 2.35662 8 - -
45147 1.38629 1.38629 1.38629 1.38629
45148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45149 9 2.57915 2.25909 2.64442 0.28946 9 - -
45150 1.38629 1.38629 1.38629 1.38629
45151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45152 10 2.81865 0.23582 2.88868 2.35662 10 - -
45153 1.38629 1.38629 1.38629 1.38629
45154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45155 11 2.53331 3.02441 0.20344 2.88069 11 - -
45156 1.38629 1.38629 1.38629 1.38629
45157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45158 12 2.53331 3.02441 0.20344 2.88069 12 - -
45159 1.38629 1.38629 1.38629 1.38629
45160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45161 13 0.23862 2.84929 2.43386 2.70756 13 - -
45162 1.38629 1.38629 1.38629 1.38629
45163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45164 14 2.57915 2.25909 2.64442 0.28946 14 - -
45165 1.38629 1.38629 1.38629 1.38629
45166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45167 15 2.81865 0.23582 2.88868 2.35662 15 - -
45168 1.38629 1.38629 1.38629 1.38629
45169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45170 16 0.23862 2.84929 2.43386 2.70756 16 - -
45171 1.38629 1.38629 1.38629 1.38629
45172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45173 17 2.53331 3.02441 0.20344 2.88069 17 - -
45174 1.38629 1.38629 1.38629 1.38629
45175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45176 18 2.57915 2.25909 2.64442 0.28946 18 - -
45177 1.38629 1.38629 1.38629 1.38629
45178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45179 19 2.81865 0.23582 2.88868 2.35662 19 - -
45180 1.38629 1.38629 1.38629 1.38629
45181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45182 20 2.53331 3.02441 0.20344 2.88069 20 - -
45183 1.38629 1.38629 1.38629 1.38629
45184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45185 21 2.57915 2.25909 2.64442 0.28946 21 - -
45186 1.38629 1.38629 1.38629 1.38629
45187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45188 22 2.53331 3.02441 0.20344 2.88069 22 - -
45189 1.38629 1.38629 1.38629 1.38629
45190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45191 23 0.23862 2.84929 2.43386 2.70756 23 - -
45192 1.38629 1.38629 1.38629 1.38629
45193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45194 24 0.23862 2.84929 2.43386 2.70756 24 - -
45195 1.38629 1.38629 1.38629 1.38629
45196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45197 25 2.57915 2.25909 2.64442 0.28946 25 - -
45198 1.38629 1.38629 1.38629 1.38629
45199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45200 26 0.23862 2.84929 2.43386 2.70756 26 - -
45201 1.38629 1.38629 1.38629 1.38629
45202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45203 27 2.81865 0.23582 2.88868 2.35662 27 - -
45204 1.38629 1.38629 1.38629 1.38629
45205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45206 28 2.81865 0.23582 2.88868 2.35662 28 - -
45207 1.38629 1.38629 1.38629 1.38629
45208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45209 29 2.81865 0.23582 2.88868 2.35662 29 - -
45210 1.38629 1.38629 1.38629 1.38629
45211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45212 30 2.53331 3.02441 0.20344 2.88069 30 - -
45213 1.38629 1.38629 1.38629 1.38629
45214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45215 31 2.81865 0.23582 2.88868 2.35662 31 - -
45216 1.38629 1.38629 1.38629 1.38629
45217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45218 32 2.57915 2.25909 2.64442 0.28946 32 - -
45219 1.38629 1.38629 1.38629 1.38629
45220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45221 33 2.53331 3.02441 0.20344 2.88069 33 - -
45222 1.38629 1.38629 1.38629 1.38629
45223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45224 34 0.23862 2.84929 2.43386 2.70756 34 - -
45225 1.38629 1.38629 1.38629 1.38629
45226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45227 35 0.23862 2.84929 2.43386 2.70756 35 - -
45228 1.38629 1.38629 1.38629 1.38629
45229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45230 36 2.81865 0.23582 2.88868 2.35662 36 - -
45231 1.38629 1.38629 1.38629 1.38629
45232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45233 37 2.57915 2.25909 2.64442 0.28946 37 - -
45234 1.38629 1.38629 1.38629 1.38629
45235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45236 38 2.57915 2.25909 2.64442 0.28946 38 - -
45237 1.38629 1.38629 1.38629 1.38629
45238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45239 39 0.23862 2.84929 2.43386 2.70756 39 - -
45240 1.38629 1.38629 1.38629 1.38629
45241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45242 40 0.23862 2.84929 2.43386 2.70756 40 - -
45243 1.38629 1.38629 1.38629 1.38629
45244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45245 41 2.53331 3.02441 0.20344 2.88069 41 - -
45246 1.38629 1.38629 1.38629 1.38629
45247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45248 42 2.81865 0.23582 2.88868 2.35662 42 - -
45249 1.38629 1.38629 1.38629 1.38629
45250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45251 43 0.23862 2.84929 2.43386 2.70756 43 - -
45252 1.38629 1.38629 1.38629 1.38629
45253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45254 44 2.57915 2.25909 2.64442 0.28946 44 - -
45255 1.38629 1.38629 1.38629 1.38629
45256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
45257 45 0.23862 2.84929 2.43386 2.70756 45 - -
45258 1.38629 1.38629 1.38629 1.38629
45259 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
45260 //
45261 HMMER3/b [3.0 | March 2010]
45262 NAME 4_LSU_Metazoa_4_LSU_start_fourn_long
45263 LENG 45
45264 ALPH DNA
45265 RF no
45266 CS no
45267 MAP yes
45268 DATE Mon Feb 27 22:51:31 2012
45269 NSEQ 4
45270 EFFN 3.324219
45271 CKSUM 308035123
45272 STATS LOCAL MSV -8.2459 0.71933
45273 STATS LOCAL VITERBI -7.6656 0.71933
45274 STATS LOCAL FORWARD -4.1464 0.71933
45275 HMM A C G T
45276 m->m m->i m->d i->m i->i d->m d->d
45277 COMPO 1.33918 1.38085 1.61344 1.24697
45278 1.38629 1.38629 1.38629 1.38629
45279 0.03688 4.01173 4.01173 1.46634 0.26236 0.00000 *
45280 1 0.14183 3.38076 2.80224 3.28247 1 - -
45281 1.38629 1.38629 1.38629 1.38629
45282 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45283 2 3.08911 2.59546 3.13724 0.17860 2 - -
45284 1.38629 1.38629 1.38629 1.38629
45285 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45286 3 3.08911 2.59546 3.13724 0.17860 3 - -
45287 1.38629 1.38629 1.38629 1.38629
45288 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45289 4 3.08911 2.59546 3.13724 0.17860 4 - -
45290 1.38629 1.38629 1.38629 1.38629
45291 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45292 5 2.94787 3.58826 0.11710 3.49298 5 - -
45293 1.38629 1.38629 1.38629 1.38629
45294 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45295 6 0.14183 3.38076 2.80224 3.28247 6 - -
45296 1.38629 1.38629 1.38629 1.38629
45297 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45298 7 3.43368 0.13014 3.48311 2.82941 7 - -
45299 1.38629 1.38629 1.38629 1.38629
45300 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45301 8 3.43368 0.13014 3.48311 2.82941 8 - -
45302 1.38629 1.38629 1.38629 1.38629
45303 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45304 9 3.08911 2.59546 3.13724 0.17860 9 - -
45305 1.38629 1.38629 1.38629 1.38629
45306 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45307 10 3.43368 0.13014 3.48311 2.82941 10 - -
45308 1.38629 1.38629 1.38629 1.38629
45309 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45310 11 0.14183 3.38076 2.80224 3.28247 11 - -
45311 1.38629 1.38629 1.38629 1.38629
45312 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45313 12 2.94787 3.58826 0.11710 3.49298 12 - -
45314 1.38629 1.38629 1.38629 1.38629
45315 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45316 13 3.43368 0.13014 3.48311 2.82941 13 - -
45317 1.38629 1.38629 1.38629 1.38629
45318 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45319 14 3.08911 2.59546 3.13724 0.17860 14 - -
45320 1.38629 1.38629 1.38629 1.38629
45321 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45322 15 3.43368 0.13014 3.48311 2.82941 15 - -
45323 1.38629 1.38629 1.38629 1.38629
45324 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45325 16 0.14183 3.38076 2.80224 3.28247 16 - -
45326 1.38629 1.38629 1.38629 1.38629
45327 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45328 17 2.94787 3.58826 0.11710 3.49298 17 - -
45329 1.38629 1.38629 1.38629 1.38629
45330 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45331 18 3.08911 2.59546 3.13724 0.17860 18 - -
45332 1.38629 1.38629 1.38629 1.38629
45333 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45334 19 3.43368 0.13014 3.48311 2.82941 19 - -
45335 1.38629 1.38629 1.38629 1.38629
45336 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45337 20 2.94787 3.58826 0.11710 3.49298 20 - -
45338 1.38629 1.38629 1.38629 1.38629
45339 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45340 21 3.08911 2.59546 3.13724 0.17860 21 - -
45341 1.38629 1.38629 1.38629 1.38629
45342 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45343 22 2.94787 3.58826 0.11710 3.49298 22 - -
45344 1.38629 1.38629 1.38629 1.38629
45345 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45346 23 0.14183 3.38076 2.80224 3.28247 23 - -
45347 1.38629 1.38629 1.38629 1.38629
45348 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45349 24 3.08911 2.59546 3.13724 0.17860 24 - -
45350 1.38629 1.38629 1.38629 1.38629
45351 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45352 25 3.08911 2.59546 3.13724 0.17860 25 - -
45353 1.38629 1.38629 1.38629 1.38629
45354 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45355 26 0.14183 3.38076 2.80224 3.28247 26 - -
45356 1.38629 1.38629 1.38629 1.38629
45357 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45358 27 3.43368 0.13014 3.48311 2.82941 27 - -
45359 1.38629 1.38629 1.38629 1.38629
45360 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45361 28 3.43368 0.13014 3.48311 2.82941 28 - -
45362 1.38629 1.38629 1.38629 1.38629
45363 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45364 29 3.43368 0.13014 3.48311 2.82941 29 - -
45365 1.38629 1.38629 1.38629 1.38629
45366 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45367 30 2.94787 3.58826 0.11710 3.49298 30 - -
45368 1.38629 1.38629 1.38629 1.38629
45369 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45370 31 3.43368 0.13014 3.48311 2.82941 31 - -
45371 1.38629 1.38629 1.38629 1.38629
45372 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45373 32 3.08911 2.59546 3.13724 0.17860 32 - -
45374 1.38629 1.38629 1.38629 1.38629
45375 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45376 33 2.94787 3.58826 0.11710 3.49298 33 - -
45377 1.38629 1.38629 1.38629 1.38629
45378 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45379 34 0.14183 3.38076 2.80224 3.28247 34 - -
45380 1.38629 1.38629 1.38629 1.38629
45381 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45382 35 0.14183 3.38076 2.80224 3.28247 35 - -
45383 1.38629 1.38629 1.38629 1.38629
45384 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45385 36 3.08911 2.59546 3.13724 0.17860 36 - -
45386 1.38629 1.38629 1.38629 1.38629
45387 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45388 37 3.08911 2.59546 3.13724 0.17860 37 - -
45389 1.38629 1.38629 1.38629 1.38629
45390 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45391 38 3.08911 2.59546 3.13724 0.17860 38 - -
45392 1.38629 1.38629 1.38629 1.38629
45393 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45394 39 0.14183 3.38076 2.80224 3.28247 39 - -
45395 1.38629 1.38629 1.38629 1.38629
45396 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45397 40 0.14183 3.38076 2.80224 3.28247 40 - -
45398 1.38629 1.38629 1.38629 1.38629
45399 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45400 41 2.94787 3.58826 0.11710 3.49298 41 - -
45401 1.38629 1.38629 1.38629 1.38629
45402 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45403 42 3.43368 0.13014 3.48311 2.82941 42 - -
45404 1.38629 1.38629 1.38629 1.38629
45405 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45406 43 0.14183 3.38076 2.80224 3.28247 43 - -
45407 1.38629 1.38629 1.38629 1.38629
45408 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45409 44 3.08911 2.59546 3.13724 0.17860 44 - -
45410 1.38629 1.38629 1.38629 1.38629
45411 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
45412 45 0.14183 3.38076 2.80224 3.28247 45 - -
45413 1.38629 1.38629 1.38629 1.38629
45414 0.01861 3.99346 * 1.46634 0.26236 0.00000 *
45415 //
45416 HMMER3/b [3.0 | March 2010]
45417 NAME 4_LSU_Metazoa_4_LSU_start_fouro_long
45418 LENG 45
45419 ALPH DNA
45420 RF no
45421 CS no
45422 MAP yes
45423 DATE Mon Feb 27 22:51:39 2012
45424 NSEQ 3
45425 EFFN 3.000000
45426 CKSUM 156050492
45427 STATS LOCAL MSV -8.0097 0.72066
45428 STATS LOCAL VITERBI -7.7228 0.72066
45429 STATS LOCAL FORWARD -4.1160 0.72066
45430 HMM A C G T
45431 m->m m->i m->d i->m i->i d->m d->d
45432 COMPO 1.34354 1.31352 1.69463 1.24988
45433 1.38629 1.38629 1.38629 1.38629
45434 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
45435 1 3.30705 0.14631 3.36166 2.73626 1 - -
45436 1.38629 1.38629 1.38629 1.38629
45437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45438 2 2.97980 2.52563 3.03204 0.19727 2 - -
45439 1.38629 1.38629 1.38629 1.38629
45440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45441 3 2.97980 2.52563 3.03204 0.19727 3 - -
45442 1.38629 1.38629 1.38629 1.38629
45443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45444 4 2.97980 2.52563 3.03204 0.19727 4 - -
45445 1.38629 1.38629 1.38629 1.38629
45446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45447 5 2.86982 3.47591 0.13017 3.36931 5 - -
45448 1.38629 1.38629 1.38629 1.38629
45449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45450 6 0.15719 3.27118 2.73043 3.16274 6 - -
45451 1.38629 1.38629 1.38629 1.38629
45452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45453 7 3.30705 0.14631 3.36166 2.73626 7 - -
45454 1.38629 1.38629 1.38629 1.38629
45455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45456 8 3.30705 0.14631 3.36166 2.73626 8 - -
45457 1.38629 1.38629 1.38629 1.38629
45458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45459 9 2.97980 2.52563 3.03204 0.19727 9 - -
45460 1.38629 1.38629 1.38629 1.38629
45461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45462 10 3.30705 0.14631 3.36166 2.73626 10 - -
45463 1.38629 1.38629 1.38629 1.38629
45464 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45465 11 0.15719 3.27118 2.73043 3.16274 11 - -
45466 1.38629 1.38629 1.38629 1.38629
45467 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45468 12 0.15719 3.27118 2.73043 3.16274 12 - -
45469 1.38629 1.38629 1.38629 1.38629
45470 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45471 13 3.30705 0.14631 3.36166 2.73626 13 - -
45472 1.38629 1.38629 1.38629 1.38629
45473 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45474 14 2.97980 2.52563 3.03204 0.19727 14 - -
45475 1.38629 1.38629 1.38629 1.38629
45476 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45477 15 3.30705 0.14631 3.36166 2.73626 15 - -
45478 1.38629 1.38629 1.38629 1.38629
45479 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45480 16 0.15719 3.27118 2.73043 3.16274 16 - -
45481 1.38629 1.38629 1.38629 1.38629
45482 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45483 17 2.86982 3.47591 0.13017 3.36931 17 - -
45484 1.38629 1.38629 1.38629 1.38629
45485 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45486 18 2.97980 2.52563 3.03204 0.19727 18 - -
45487 1.38629 1.38629 1.38629 1.38629
45488 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45489 19 3.30705 0.14631 3.36166 2.73626 19 - -
45490 1.38629 1.38629 1.38629 1.38629
45491 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45492 20 2.86982 3.47591 0.13017 3.36931 20 - -
45493 1.38629 1.38629 1.38629 1.38629
45494 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45495 21 2.97980 2.52563 3.03204 0.19727 21 - -
45496 1.38629 1.38629 1.38629 1.38629
45497 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45498 22 2.86982 3.47591 0.13017 3.36931 22 - -
45499 1.38629 1.38629 1.38629 1.38629
45500 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45501 23 0.15719 3.27118 2.73043 3.16274 23 - -
45502 1.38629 1.38629 1.38629 1.38629
45503 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45504 24 2.97980 2.52563 3.03204 0.19727 24 - -
45505 1.38629 1.38629 1.38629 1.38629
45506 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45507 25 2.97980 2.52563 3.03204 0.19727 25 - -
45508 1.38629 1.38629 1.38629 1.38629
45509 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45510 26 0.15719 3.27118 2.73043 3.16274 26 - -
45511 1.38629 1.38629 1.38629 1.38629
45512 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45513 27 3.30705 0.14631 3.36166 2.73626 27 - -
45514 1.38629 1.38629 1.38629 1.38629
45515 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45516 28 3.30705 0.14631 3.36166 2.73626 28 - -
45517 1.38629 1.38629 1.38629 1.38629
45518 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45519 29 3.30705 0.14631 3.36166 2.73626 29 - -
45520 1.38629 1.38629 1.38629 1.38629
45521 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45522 30 2.86982 3.47591 0.13017 3.36931 30 - -
45523 1.38629 1.38629 1.38629 1.38629
45524 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45525 31 3.30705 0.14631 3.36166 2.73626 31 - -
45526 1.38629 1.38629 1.38629 1.38629
45527 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45528 32 2.97980 2.52563 3.03204 0.19727 32 - -
45529 1.38629 1.38629 1.38629 1.38629
45530 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45531 33 2.86982 3.47591 0.13017 3.36931 33 - -
45532 1.38629 1.38629 1.38629 1.38629
45533 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45534 34 0.15719 3.27118 2.73043 3.16274 34 - -
45535 1.38629 1.38629 1.38629 1.38629
45536 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45537 35 0.15719 3.27118 2.73043 3.16274 35 - -
45538 1.38629 1.38629 1.38629 1.38629
45539 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45540 36 2.97980 2.52563 3.03204 0.19727 36 - -
45541 1.38629 1.38629 1.38629 1.38629
45542 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45543 37 2.97980 2.52563 3.03204 0.19727 37 - -
45544 1.38629 1.38629 1.38629 1.38629
45545 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45546 38 2.97980 2.52563 3.03204 0.19727 38 - -
45547 1.38629 1.38629 1.38629 1.38629
45548 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45549 39 0.15719 3.27118 2.73043 3.16274 39 - -
45550 1.38629 1.38629 1.38629 1.38629
45551 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45552 40 0.15719 3.27118 2.73043 3.16274 40 - -
45553 1.38629 1.38629 1.38629 1.38629
45554 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45555 41 2.86982 3.47591 0.13017 3.36931 41 - -
45556 1.38629 1.38629 1.38629 1.38629
45557 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45558 42 3.30705 0.14631 3.36166 2.73626 42 - -
45559 1.38629 1.38629 1.38629 1.38629
45560 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45561 43 0.15719 3.27118 2.73043 3.16274 43 - -
45562 1.38629 1.38629 1.38629 1.38629
45563 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45564 44 2.97980 2.52563 3.03204 0.19727 44 - -
45565 1.38629 1.38629 1.38629 1.38629
45566 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45567 45 0.15719 3.27118 2.73043 3.16274 45 - -
45568 1.38629 1.38629 1.38629 1.38629
45569 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
45570 //
45571 HMMER3/b [3.0 | March 2010]
45572 NAME 4_LSU_Metazoa_4_LSU_start_fourp_long
45573 LENG 45
45574 ALPH DNA
45575 RF no
45576 CS no
45577 MAP yes
45578 DATE Mon Feb 27 22:51:45 2012
45579 NSEQ 3
45580 EFFN 3.000000
45581 CKSUM 435892151
45582 STATS LOCAL MSV -8.2073 0.72146
45583 STATS LOCAL VITERBI -7.7951 0.72146
45584 STATS LOCAL FORWARD -4.0277 0.72146
45585 HMM A C G T
45586 m->m m->i m->d i->m i->i d->m d->d
45587 COMPO 1.39771 1.35938 1.58160 1.23659
45588 1.38629 1.38629 1.38629 1.38629
45589 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
45590 1 2.42752 1.34012 2.49742 0.56628 1 - -
45591 1.38629 1.38629 1.38629 1.38629
45592 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45593 2 2.11867 2.11575 1.35978 0.68806 2 - -
45594 1.38629 1.38629 1.38629 1.38629
45595 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45596 3 2.97980 2.52563 3.03204 0.19727 3 - -
45597 1.38629 1.38629 1.38629 1.38629
45598 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45599 4 2.97980 2.52563 3.03204 0.19727 4 - -
45600 1.38629 1.38629 1.38629 1.38629
45601 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45602 5 2.86982 3.47591 0.13017 3.36931 5 - -
45603 1.38629 1.38629 1.38629 1.38629
45604 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45605 6 0.15719 3.27118 2.73043 3.16274 6 - -
45606 1.38629 1.38629 1.38629 1.38629
45607 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45608 7 3.30705 0.14631 3.36166 2.73626 7 - -
45609 1.38629 1.38629 1.38629 1.38629
45610 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45611 8 3.30705 0.14631 3.36166 2.73626 8 - -
45612 1.38629 1.38629 1.38629 1.38629
45613 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45614 9 2.97980 2.52563 3.03204 0.19727 9 - -
45615 1.38629 1.38629 1.38629 1.38629
45616 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45617 10 3.30705 0.14631 3.36166 2.73626 10 - -
45618 1.38629 1.38629 1.38629 1.38629
45619 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45620 11 0.15719 3.27118 2.73043 3.16274 11 - -
45621 1.38629 1.38629 1.38629 1.38629
45622 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45623 12 2.86982 3.47591 0.13017 3.36931 12 - -
45624 1.38629 1.38629 1.38629 1.38629
45625 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45626 13 3.30705 0.14631 3.36166 2.73626 13 - -
45627 1.38629 1.38629 1.38629 1.38629
45628 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45629 14 2.97980 2.52563 3.03204 0.19727 14 - -
45630 1.38629 1.38629 1.38629 1.38629
45631 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45632 15 3.30705 0.14631 3.36166 2.73626 15 - -
45633 1.38629 1.38629 1.38629 1.38629
45634 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45635 16 0.15719 3.27118 2.73043 3.16274 16 - -
45636 1.38629 1.38629 1.38629 1.38629
45637 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45638 17 2.86982 3.47591 0.13017 3.36931 17 - -
45639 1.38629 1.38629 1.38629 1.38629
45640 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45641 18 2.97980 2.52563 3.03204 0.19727 18 - -
45642 1.38629 1.38629 1.38629 1.38629
45643 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45644 19 3.30705 0.14631 3.36166 2.73626 19 - -
45645 1.38629 1.38629 1.38629 1.38629
45646 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45647 20 2.86982 3.47591 0.13017 3.36931 20 - -
45648 1.38629 1.38629 1.38629 1.38629
45649 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45650 21 2.97980 2.52563 3.03204 0.19727 21 - -
45651 1.38629 1.38629 1.38629 1.38629
45652 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45653 22 2.86982 3.47591 0.13017 3.36931 22 - -
45654 1.38629 1.38629 1.38629 1.38629
45655 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45656 23 0.15719 3.27118 2.73043 3.16274 23 - -
45657 1.38629 1.38629 1.38629 1.38629
45658 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45659 24 2.97980 2.52563 3.03204 0.19727 24 - -
45660 1.38629 1.38629 1.38629 1.38629
45661 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45662 25 2.97980 2.52563 3.03204 0.19727 25 - -
45663 1.38629 1.38629 1.38629 1.38629
45664 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45665 26 0.15719 3.27118 2.73043 3.16274 26 - -
45666 1.38629 1.38629 1.38629 1.38629
45667 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45668 27 3.30705 0.14631 3.36166 2.73626 27 - -
45669 1.38629 1.38629 1.38629 1.38629
45670 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45671 28 3.30705 0.14631 3.36166 2.73626 28 - -
45672 1.38629 1.38629 1.38629 1.38629
45673 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45674 29 3.30705 0.14631 3.36166 2.73626 29 - -
45675 1.38629 1.38629 1.38629 1.38629
45676 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45677 30 2.86982 3.47591 0.13017 3.36931 30 - -
45678 1.38629 1.38629 1.38629 1.38629
45679 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45680 31 3.30705 0.14631 3.36166 2.73626 31 - -
45681 1.38629 1.38629 1.38629 1.38629
45682 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45683 32 2.97980 2.52563 3.03204 0.19727 32 - -
45684 1.38629 1.38629 1.38629 1.38629
45685 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45686 33 2.86982 3.47591 0.13017 3.36931 33 - -
45687 1.38629 1.38629 1.38629 1.38629
45688 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45689 34 0.15719 3.27118 2.73043 3.16274 34 - -
45690 1.38629 1.38629 1.38629 1.38629
45691 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45692 35 0.15719 3.27118 2.73043 3.16274 35 - -
45693 1.38629 1.38629 1.38629 1.38629
45694 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45695 36 2.97980 2.52563 3.03204 0.19727 36 - -
45696 1.38629 1.38629 1.38629 1.38629
45697 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45698 37 2.97980 2.52563 3.03204 0.19727 37 - -
45699 1.38629 1.38629 1.38629 1.38629
45700 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45701 38 2.97980 2.52563 3.03204 0.19727 38 - -
45702 1.38629 1.38629 1.38629 1.38629
45703 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45704 39 0.15719 3.27118 2.73043 3.16274 39 - -
45705 1.38629 1.38629 1.38629 1.38629
45706 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45707 40 0.15719 3.27118 2.73043 3.16274 40 - -
45708 1.38629 1.38629 1.38629 1.38629
45709 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45710 41 2.86982 3.47591 0.13017 3.36931 41 - -
45711 1.38629 1.38629 1.38629 1.38629
45712 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45713 42 3.30705 0.14631 3.36166 2.73626 42 - -
45714 1.38629 1.38629 1.38629 1.38629
45715 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45716 43 0.15719 3.27118 2.73043 3.16274 43 - -
45717 1.38629 1.38629 1.38629 1.38629
45718 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45719 44 2.97980 2.52563 3.03204 0.19727 44 - -
45720 1.38629 1.38629 1.38629 1.38629
45721 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45722 45 0.15719 3.27118 2.73043 3.16274 45 - -
45723 1.38629 1.38629 1.38629 1.38629
45724 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
45725 //
45726 HMMER3/b [3.0 | March 2010]
45727 NAME 4_LSU_Metazoa_4_LSU_start_fourteen_long
45728 LENG 45
45729 ALPH DNA
45730 RF no
45731 CS no
45732 MAP yes
45733 DATE Mon Feb 27 22:58:33 2012
45734 NSEQ 3
45735 EFFN 3.000000
45736 CKSUM 2215319068
45737 STATS LOCAL MSV -8.1736 0.72037
45738 STATS LOCAL VITERBI -7.8757 0.72037
45739 STATS LOCAL FORWARD -4.0709 0.72037
45740 HMM A C G T
45741 m->m m->i m->d i->m i->i d->m d->d
45742 COMPO 1.22282 1.39082 1.52048 1.43496
45743 1.38629 1.38629 1.38629 1.38629
45744 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
45745 1 2.97980 2.52563 3.03204 0.19727 1 - -
45746 1.38629 1.38629 1.38629 1.38629
45747 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45748 2 3.30705 0.14631 3.36166 2.73626 2 - -
45749 1.38629 1.38629 1.38629 1.38629
45750 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45751 3 2.97980 2.52563 3.03204 0.19727 3 - -
45752 1.38629 1.38629 1.38629 1.38629
45753 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45754 4 2.86982 3.47591 0.13017 3.36931 4 - -
45755 1.38629 1.38629 1.38629 1.38629
45756 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45757 5 0.15719 3.27118 2.73043 3.16274 5 - -
45758 1.38629 1.38629 1.38629 1.38629
45759 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45760 6 0.15719 3.27118 2.73043 3.16274 6 - -
45761 1.38629 1.38629 1.38629 1.38629
45762 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45763 7 2.97980 2.52563 3.03204 0.19727 7 - -
45764 1.38629 1.38629 1.38629 1.38629
45765 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45766 8 3.30705 0.14631 3.36166 2.73626 8 - -
45767 1.38629 1.38629 1.38629 1.38629
45768 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45769 9 2.97980 2.52563 3.03204 0.19727 9 - -
45770 1.38629 1.38629 1.38629 1.38629
45771 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45772 10 3.30705 0.14631 3.36166 2.73626 10 - -
45773 1.38629 1.38629 1.38629 1.38629
45774 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45775 11 0.15719 3.27118 2.73043 3.16274 11 - -
45776 1.38629 1.38629 1.38629 1.38629
45777 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45778 12 2.86982 3.47591 0.13017 3.36931 12 - -
45779 1.38629 1.38629 1.38629 1.38629
45780 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45781 13 0.15719 3.27118 2.73043 3.16274 13 - -
45782 1.38629 1.38629 1.38629 1.38629
45783 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45784 14 2.97980 2.52563 3.03204 0.19727 14 - -
45785 1.38629 1.38629 1.38629 1.38629
45786 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45787 15 3.30705 0.14631 3.36166 2.73626 15 - -
45788 1.38629 1.38629 1.38629 1.38629
45789 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45790 16 0.15719 3.27118 2.73043 3.16274 16 - -
45791 1.38629 1.38629 1.38629 1.38629
45792 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45793 17 2.86982 3.47591 0.13017 3.36931 17 - -
45794 1.38629 1.38629 1.38629 1.38629
45795 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45796 18 2.86982 3.47591 0.13017 3.36931 18 - -
45797 1.38629 1.38629 1.38629 1.38629
45798 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45799 19 3.30705 0.14631 3.36166 2.73626 19 - -
45800 1.38629 1.38629 1.38629 1.38629
45801 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45802 20 2.86982 3.47591 0.13017 3.36931 20 - -
45803 1.38629 1.38629 1.38629 1.38629
45804 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45805 21 0.15719 3.27118 2.73043 3.16274 21 - -
45806 1.38629 1.38629 1.38629 1.38629
45807 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45808 22 2.86982 3.47591 0.13017 3.36931 22 - -
45809 1.38629 1.38629 1.38629 1.38629
45810 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45811 23 0.15719 3.27118 2.73043 3.16274 23 - -
45812 1.38629 1.38629 1.38629 1.38629
45813 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45814 24 2.97980 2.52563 3.03204 0.19727 24 - -
45815 1.38629 1.38629 1.38629 1.38629
45816 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45817 25 3.30705 0.14631 3.36166 2.73626 25 - -
45818 1.38629 1.38629 1.38629 1.38629
45819 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45820 26 0.15719 3.27118 2.73043 3.16274 26 - -
45821 1.38629 1.38629 1.38629 1.38629
45822 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45823 27 3.30705 0.14631 3.36166 2.73626 27 - -
45824 1.38629 1.38629 1.38629 1.38629
45825 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45826 28 3.30705 0.14631 3.36166 2.73626 28 - -
45827 1.38629 1.38629 1.38629 1.38629
45828 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45829 29 3.30705 0.14631 3.36166 2.73626 29 - -
45830 1.38629 1.38629 1.38629 1.38629
45831 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45832 30 2.86982 3.47591 0.13017 3.36931 30 - -
45833 1.38629 1.38629 1.38629 1.38629
45834 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45835 31 3.30705 0.14631 3.36166 2.73626 31 - -
45836 1.38629 1.38629 1.38629 1.38629
45837 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45838 32 2.97980 2.52563 3.03204 0.19727 32 - -
45839 1.38629 1.38629 1.38629 1.38629
45840 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45841 33 2.86982 3.47591 0.13017 3.36931 33 - -
45842 1.38629 1.38629 1.38629 1.38629
45843 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45844 34 0.15719 3.27118 2.73043 3.16274 34 - -
45845 1.38629 1.38629 1.38629 1.38629
45846 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45847 35 0.15719 3.27118 2.73043 3.16274 35 - -
45848 1.38629 1.38629 1.38629 1.38629
45849 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45850 36 2.97980 2.52563 3.03204 0.19727 36 - -
45851 1.38629 1.38629 1.38629 1.38629
45852 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45853 37 2.97980 2.52563 3.03204 0.19727 37 - -
45854 1.38629 1.38629 1.38629 1.38629
45855 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45856 38 2.97980 2.52563 3.03204 0.19727 38 - -
45857 1.38629 1.38629 1.38629 1.38629
45858 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45859 39 0.15719 3.27118 2.73043 3.16274 39 - -
45860 1.38629 1.38629 1.38629 1.38629
45861 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45862 40 0.15719 3.27118 2.73043 3.16274 40 - -
45863 1.38629 1.38629 1.38629 1.38629
45864 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45865 41 2.86982 3.47591 0.13017 3.36931 41 - -
45866 1.38629 1.38629 1.38629 1.38629
45867 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45868 42 3.30705 0.14631 3.36166 2.73626 42 - -
45869 1.38629 1.38629 1.38629 1.38629
45870 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45871 43 0.15719 3.27118 2.73043 3.16274 43 - -
45872 1.38629 1.38629 1.38629 1.38629
45873 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45874 44 2.97980 2.52563 3.03204 0.19727 44 - -
45875 1.38629 1.38629 1.38629 1.38629
45876 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45877 45 0.15719 3.27118 2.73043 3.16274 45 - -
45878 1.38629 1.38629 1.38629 1.38629
45879 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
45880 //
45881 HMMER3/b [3.0 | March 2010]
45882 NAME 4_LSU_Metazoa_4_LSU_start_nine_long
45883 LENG 45
45884 ALPH DNA
45885 RF no
45886 CS no
45887 MAP yes
45888 DATE Mon Feb 27 22:56:58 2012
45889 NSEQ 3
45890 EFFN 3.000000
45891 CKSUM 957197694
45892 STATS LOCAL MSV -7.8664 0.72063
45893 STATS LOCAL VITERBI -7.7547 0.72063
45894 STATS LOCAL FORWARD -4.2553 0.72063
45895 HMM A C G T
45896 m->m m->i m->d i->m i->i d->m d->d
45897 COMPO 1.34194 1.38068 1.60488 1.25057
45898 1.38629 1.38629 1.38629 1.38629
45899 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
45900 1 2.97980 2.52563 3.03204 0.19727 1 - -
45901 1.38629 1.38629 1.38629 1.38629
45902 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45903 2 2.97980 2.52563 3.03204 0.19727 2 - -
45904 1.38629 1.38629 1.38629 1.38629
45905 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45906 3 2.97980 2.52563 3.03204 0.19727 3 - -
45907 1.38629 1.38629 1.38629 1.38629
45908 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45909 4 3.30705 0.14631 3.36166 2.73626 4 - -
45910 1.38629 1.38629 1.38629 1.38629
45911 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45912 5 2.86982 3.47591 0.13017 3.36931 5 - -
45913 1.38629 1.38629 1.38629 1.38629
45914 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45915 6 0.15719 3.27118 2.73043 3.16274 6 - -
45916 1.38629 1.38629 1.38629 1.38629
45917 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45918 7 3.30705 0.14631 3.36166 2.73626 7 - -
45919 1.38629 1.38629 1.38629 1.38629
45920 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45921 8 3.30705 0.14631 3.36166 2.73626 8 - -
45922 1.38629 1.38629 1.38629 1.38629
45923 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45924 9 2.97980 2.52563 3.03204 0.19727 9 - -
45925 1.38629 1.38629 1.38629 1.38629
45926 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45927 10 2.86982 3.47591 0.13017 3.36931 10 - -
45928 1.38629 1.38629 1.38629 1.38629
45929 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45930 11 0.15719 3.27118 2.73043 3.16274 11 - -
45931 1.38629 1.38629 1.38629 1.38629
45932 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45933 12 0.15719 3.27118 2.73043 3.16274 12 - -
45934 1.38629 1.38629 1.38629 1.38629
45935 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45936 13 2.97980 2.52563 3.03204 0.19727 13 - -
45937 1.38629 1.38629 1.38629 1.38629
45938 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45939 14 3.30705 0.14631 3.36166 2.73626 14 - -
45940 1.38629 1.38629 1.38629 1.38629
45941 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45942 15 2.97980 2.52563 3.03204 0.19727 15 - -
45943 1.38629 1.38629 1.38629 1.38629
45944 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45945 16 2.86982 3.47591 0.13017 3.36931 16 - -
45946 1.38629 1.38629 1.38629 1.38629
45947 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45948 17 0.15719 3.27118 2.73043 3.16274 17 - -
45949 1.38629 1.38629 1.38629 1.38629
45950 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45951 18 3.30705 0.14631 3.36166 2.73626 18 - -
45952 1.38629 1.38629 1.38629 1.38629
45953 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45954 19 2.86982 3.47591 0.13017 3.36931 19 - -
45955 1.38629 1.38629 1.38629 1.38629
45956 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45957 20 2.97980 2.52563 3.03204 0.19727 20 - -
45958 1.38629 1.38629 1.38629 1.38629
45959 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45960 21 2.86982 3.47591 0.13017 3.36931 21 - -
45961 1.38629 1.38629 1.38629 1.38629
45962 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45963 22 0.15719 3.27118 2.73043 3.16274 22 - -
45964 1.38629 1.38629 1.38629 1.38629
45965 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45966 23 2.97980 2.52563 3.03204 0.19727 23 - -
45967 1.38629 1.38629 1.38629 1.38629
45968 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45969 24 2.97980 2.52563 3.03204 0.19727 24 - -
45970 1.38629 1.38629 1.38629 1.38629
45971 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45972 25 0.15719 3.27118 2.73043 3.16274 25 - -
45973 1.38629 1.38629 1.38629 1.38629
45974 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45975 26 3.30705 0.14631 3.36166 2.73626 26 - -
45976 1.38629 1.38629 1.38629 1.38629
45977 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45978 27 3.30705 0.14631 3.36166 2.73626 27 - -
45979 1.38629 1.38629 1.38629 1.38629
45980 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45981 28 3.30705 0.14631 3.36166 2.73626 28 - -
45982 1.38629 1.38629 1.38629 1.38629
45983 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45984 29 2.86982 3.47591 0.13017 3.36931 29 - -
45985 1.38629 1.38629 1.38629 1.38629
45986 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45987 30 3.30705 0.14631 3.36166 2.73626 30 - -
45988 1.38629 1.38629 1.38629 1.38629
45989 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45990 31 2.97980 2.52563 3.03204 0.19727 31 - -
45991 1.38629 1.38629 1.38629 1.38629
45992 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45993 32 2.86982 3.47591 0.13017 3.36931 32 - -
45994 1.38629 1.38629 1.38629 1.38629
45995 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45996 33 0.15719 3.27118 2.73043 3.16274 33 - -
45997 1.38629 1.38629 1.38629 1.38629
45998 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
45999 34 0.15719 3.27118 2.73043 3.16274 34 - -
46000 1.38629 1.38629 1.38629 1.38629
46001 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46002 35 3.30705 0.14631 3.36166 2.73626 35 - -
46003 1.38629 1.38629 1.38629 1.38629
46004 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46005 36 2.97980 2.52563 3.03204 0.19727 36 - -
46006 1.38629 1.38629 1.38629 1.38629
46007 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46008 37 2.97980 2.52563 3.03204 0.19727 37 - -
46009 1.38629 1.38629 1.38629 1.38629
46010 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46011 38 0.15719 3.27118 2.73043 3.16274 38 - -
46012 1.38629 1.38629 1.38629 1.38629
46013 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46014 39 0.15719 3.27118 2.73043 3.16274 39 - -
46015 1.38629 1.38629 1.38629 1.38629
46016 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46017 40 2.86982 3.47591 0.13017 3.36931 40 - -
46018 1.38629 1.38629 1.38629 1.38629
46019 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46020 41 3.30705 0.14631 3.36166 2.73626 41 - -
46021 1.38629 1.38629 1.38629 1.38629
46022 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46023 42 0.15719 3.27118 2.73043 3.16274 42 - -
46024 1.38629 1.38629 1.38629 1.38629
46025 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46026 43 2.97980 2.52563 3.03204 0.19727 43 - -
46027 1.38629 1.38629 1.38629 1.38629
46028 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46029 44 0.15719 3.27118 2.73043 3.16274 44 - -
46030 1.38629 1.38629 1.38629 1.38629
46031 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46032 45 2.97980 2.52563 3.03204 0.19727 45 - -
46033 1.38629 1.38629 1.38629 1.38629
46034 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
46035 //
46036 HMMER3/b [3.0 | March 2010]
46037 NAME 4_LSU_Metazoa_4_LSU_start_nineteen_long
46038 LENG 45
46039 ALPH DNA
46040 RF no
46041 CS no
46042 MAP yes
46043 DATE Mon Feb 27 22:59:36 2012
46044 NSEQ 6
46045 EFFN 3.249023
46046 CKSUM 2236108995
46047 STATS LOCAL MSV -8.0378 0.71932
46048 STATS LOCAL VITERBI -7.6712 0.71932
46049 STATS LOCAL FORWARD -4.0582 0.71932
46050 HMM A C G T
46051 m->m m->i m->d i->m i->i d->m d->d
46052 COMPO 1.33869 1.34207 1.31167 1.57438
46053 1.38629 1.38629 1.38629 1.38629
46054 0.03739 3.99802 3.99802 1.46634 0.26236 0.00000 *
46055 1 3.40558 0.13354 3.45619 2.80891 1 - -
46056 1.38629 1.38629 1.38629 1.38629
46057 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46058 2 2.93080 3.56347 0.11985 3.46564 2 - -
46059 1.38629 1.38629 1.38629 1.38629
46060 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46061 3 3.06457 2.57984 3.11364 0.18260 3 - -
46062 1.38629 1.38629 1.38629 1.38629
46063 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46064 4 3.06457 2.57984 3.11364 0.18260 4 - -
46065 1.38629 1.38629 1.38629 1.38629
46066 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46067 5 2.93080 3.56347 0.11985 3.46564 5 - -
46068 1.38629 1.38629 1.38629 1.38629
46069 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46070 6 2.93080 3.56347 0.11985 3.46564 6 - -
46071 1.38629 1.38629 1.38629 1.38629
46072 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46073 7 3.40558 0.13354 3.45619 2.80891 7 - -
46074 1.38629 1.38629 1.38629 1.38629
46075 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46076 8 3.40558 0.13354 3.45619 2.80891 8 - -
46077 1.38629 1.38629 1.38629 1.38629
46078 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46079 9 3.06457 2.57984 3.11364 0.18260 9 - -
46080 1.38629 1.38629 1.38629 1.38629
46081 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46082 10 3.40558 0.13354 3.45619 2.80891 10 - -
46083 1.38629 1.38629 1.38629 1.38629
46084 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46085 11 0.14509 3.35639 2.78639 3.25580 11 - -
46086 1.38629 1.38629 1.38629 1.38629
46087 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46088 12 2.93080 3.56347 0.11985 3.46564 12 - -
46089 1.38629 1.38629 1.38629 1.38629
46090 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46091 13 0.14509 3.35639 2.78639 3.25580 13 - -
46092 1.38629 1.38629 1.38629 1.38629
46093 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46094 14 3.06457 2.57984 3.11364 0.18260 14 - -
46095 1.38629 1.38629 1.38629 1.38629
46096 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46097 15 3.40558 0.13354 3.45619 2.80891 15 - -
46098 1.38629 1.38629 1.38629 1.38629
46099 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46100 16 0.14509 3.35639 2.78639 3.25580 16 - -
46101 1.38629 1.38629 1.38629 1.38629
46102 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46103 17 2.93080 3.56347 0.11985 3.46564 17 - -
46104 1.38629 1.38629 1.38629 1.38629
46105 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46106 18 2.93080 3.56347 0.11985 3.46564 18 - -
46107 1.38629 1.38629 1.38629 1.38629
46108 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46109 19 2.93080 3.56347 0.11985 3.46564 19 - -
46110 1.38629 1.38629 1.38629 1.38629
46111 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46112 20 0.14509 3.35639 2.78639 3.25580 20 - -
46113 1.38629 1.38629 1.38629 1.38629
46114 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46115 21 2.93080 3.56347 0.11985 3.46564 21 - -
46116 1.38629 1.38629 1.38629 1.38629
46117 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46118 22 2.93080 3.56347 0.11985 3.46564 22 - -
46119 1.38629 1.38629 1.38629 1.38629
46120 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46121 23 0.14509 3.35639 2.78639 3.25580 23 - -
46122 1.38629 1.38629 1.38629 1.38629
46123 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46124 24 3.06457 2.57984 3.11364 0.18260 24 - -
46125 1.38629 1.38629 1.38629 1.38629
46126 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46127 25 2.81213 0.32485 2.87865 1.82586 25 - -
46128 1.38629 1.38629 1.38629 1.38629
46129 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46130 26 0.14509 3.35639 2.78639 3.25580 26 - -
46131 1.38629 1.38629 1.38629 1.38629
46132 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46133 27 3.40558 0.13354 3.45619 2.80891 27 - -
46134 1.38629 1.38629 1.38629 1.38629
46135 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46136 28 3.40558 0.13354 3.45619 2.80891 28 - -
46137 1.38629 1.38629 1.38629 1.38629
46138 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46139 29 3.40558 0.13354 3.45619 2.80891 29 - -
46140 1.38629 1.38629 1.38629 1.38629
46141 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46142 30 2.93080 3.56347 0.11985 3.46564 30 - -
46143 1.38629 1.38629 1.38629 1.38629
46144 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46145 31 3.40558 0.13354 3.45619 2.80891 31 - -
46146 1.38629 1.38629 1.38629 1.38629
46147 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46148 32 3.40558 0.13354 3.45619 2.80891 32 - -
46149 1.38629 1.38629 1.38629 1.38629
46150 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46151 33 2.93080 3.56347 0.11985 3.46564 33 - -
46152 1.38629 1.38629 1.38629 1.38629
46153 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46154 34 0.14509 3.35639 2.78639 3.25580 34 - -
46155 1.38629 1.38629 1.38629 1.38629
46156 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46157 35 0.14509 3.35639 2.78639 3.25580 35 - -
46158 1.38629 1.38629 1.38629 1.38629
46159 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46160 36 3.06457 2.57984 3.11364 0.18260 36 - -
46161 1.38629 1.38629 1.38629 1.38629
46162 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46163 37 3.06457 2.57984 3.11364 0.18260 37 - -
46164 1.38629 1.38629 1.38629 1.38629
46165 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46166 38 3.06457 2.57984 3.11364 0.18260 38 - -
46167 1.38629 1.38629 1.38629 1.38629
46168 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46169 39 0.14509 3.35639 2.78639 3.25580 39 - -
46170 1.38629 1.38629 1.38629 1.38629
46171 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46172 40 0.14509 3.35639 2.78639 3.25580 40 - -
46173 1.38629 1.38629 1.38629 1.38629
46174 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46175 41 2.93080 3.56347 0.11985 3.46564 41 - -
46176 1.38629 1.38629 1.38629 1.38629
46177 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46178 42 3.40558 0.13354 3.45619 2.80891 42 - -
46179 1.38629 1.38629 1.38629 1.38629
46180 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46181 43 0.14509 3.35639 2.78639 3.25580 43 - -
46182 1.38629 1.38629 1.38629 1.38629
46183 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46184 44 3.06457 2.57984 3.11364 0.18260 44 - -
46185 1.38629 1.38629 1.38629 1.38629
46186 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
46187 45 0.14509 3.35639 2.78639 3.25580 45 - -
46188 1.38629 1.38629 1.38629 1.38629
46189 0.01887 3.97950 * 1.46634 0.26236 0.00000 *
46190 //
46191 HMMER3/b [3.0 | March 2010]
46192 NAME 4_LSU_Metazoa_4_LSU_start_one_long
46193 LENG 45
46194 ALPH DNA
46195 RF no
46196 CS no
46197 MAP yes
46198 DATE Mon Feb 27 22:49:27 2012
46199 NSEQ 33
46200 EFFN 3.782593
46201 CKSUM 1346394840
46202 STATS LOCAL MSV -6.9525 0.71933
46203 STATS LOCAL VITERBI -7.7827 0.71933
46204 STATS LOCAL FORWARD -4.3549 0.71933
46205 HMM A C G T
46206 m->m m->i m->d i->m i->i d->m d->d
46207 COMPO 1.33115 1.23617 1.49619 1.50800
46208 1.38629 1.38629 1.38629 1.38629
46209 0.03400 4.09144 4.09144 1.46634 0.26236 0.00000 *
46210 1 1.79792 1.68197 1.18854 1.06803 1 - -
46211 1.38629 1.38629 1.38629 1.38629
46212 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46213 2 3.58965 0.11299 3.63221 2.94165 2 - -
46214 1.38629 1.38629 1.38629 1.38629
46215 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46216 3 3.58965 0.11299 3.63221 2.94165 3 - -
46217 1.38629 1.38629 1.38629 1.38629
46218 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46219 4 3.22866 2.68399 3.27137 0.15765 4 - -
46220 1.38629 1.38629 1.38629 1.38629
46221 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46222 5 3.04057 3.72442 0.10324 3.64370 5 - -
46223 1.38629 1.38629 1.38629 1.38629
46224 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46225 6 0.12511 3.51682 2.89001 3.43172 6 - -
46226 1.38629 1.38629 1.38629 1.38629
46227 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46228 7 3.58965 0.11299 3.63221 2.94165 7 - -
46229 1.38629 1.38629 1.38629 1.38629
46230 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46231 8 3.58965 0.11299 3.63221 2.94165 8 - -
46232 1.38629 1.38629 1.38629 1.38629
46233 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46234 9 3.22866 2.68399 3.27137 0.15765 9 - -
46235 1.38629 1.38629 1.38629 1.38629
46236 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46237 10 3.58965 0.11299 3.63221 2.94165 10 - -
46238 1.38629 1.38629 1.38629 1.38629
46239 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46240 11 3.04057 3.72442 0.10324 3.64370 11 - -
46241 1.38629 1.38629 1.38629 1.38629
46242 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46243 12 3.04057 3.72442 0.10324 3.64370 12 - -
46244 1.38629 1.38629 1.38629 1.38629
46245 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46246 13 0.12511 3.51682 2.89001 3.43172 13 - -
46247 1.38629 1.38629 1.38629 1.38629
46248 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46249 14 3.22866 2.68399 3.27137 0.15765 14 - -
46250 1.38629 1.38629 1.38629 1.38629
46251 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46252 15 3.58965 0.11299 3.63221 2.94165 15 - -
46253 1.38629 1.38629 1.38629 1.38629
46254 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46255 16 0.12511 3.51682 2.89001 3.43172 16 - -
46256 1.38629 1.38629 1.38629 1.38629
46257 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46258 17 3.04057 3.72442 0.10324 3.64370 17 - -
46259 1.38629 1.38629 1.38629 1.38629
46260 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46261 18 0.70542 2.28199 2.24204 1.21141 18 - -
46262 1.38629 1.38629 1.38629 1.38629
46263 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46264 19 3.09248 0.23985 3.15223 2.07858 19 - -
46265 1.38629 1.38629 1.38629 1.38629
46266 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46267 20 3.04057 3.72442 0.10324 3.64370 20 - -
46268 1.38629 1.38629 1.38629 1.38629
46269 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46270 21 3.22866 2.68399 3.27137 0.15765 21 - -
46271 1.38629 1.38629 1.38629 1.38629
46272 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46273 22 3.04057 3.72442 0.10324 3.64370 22 - -
46274 1.38629 1.38629 1.38629 1.38629
46275 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46276 23 0.12511 3.51682 2.89001 3.43172 23 - -
46277 1.38629 1.38629 1.38629 1.38629
46278 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46279 24 0.86847 1.42296 1.86945 1.68632 24 - -
46280 1.38629 1.38629 1.38629 1.38629
46281 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46282 25 3.22866 2.68399 3.27137 0.15765 25 - -
46283 1.38629 1.38629 1.38629 1.38629
46284 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46285 26 0.12511 3.51682 2.89001 3.43172 26 - -
46286 1.38629 1.38629 1.38629 1.38629
46287 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46288 27 3.58965 0.11299 3.63221 2.94165 27 - -
46289 1.38629 1.38629 1.38629 1.38629
46290 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46291 28 3.58965 0.11299 3.63221 2.94165 28 - -
46292 1.38629 1.38629 1.38629 1.38629
46293 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46294 29 3.58965 0.11299 3.63221 2.94165 29 - -
46295 1.38629 1.38629 1.38629 1.38629
46296 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46297 30 3.04057 3.72442 0.10324 3.64370 30 - -
46298 1.38629 1.38629 1.38629 1.38629
46299 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46300 31 3.58965 0.11299 3.63221 2.94165 31 - -
46301 1.38629 1.38629 1.38629 1.38629
46302 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46303 32 3.22866 2.68399 3.27137 0.15765 32 - -
46304 1.38629 1.38629 1.38629 1.38629
46305 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46306 33 3.04057 3.72442 0.10324 3.64370 33 - -
46307 1.38629 1.38629 1.38629 1.38629
46308 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46309 34 0.12511 3.51682 2.89001 3.43172 34 - -
46310 1.38629 1.38629 1.38629 1.38629
46311 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46312 35 0.12511 3.51682 2.89001 3.43172 35 - -
46313 1.38629 1.38629 1.38629 1.38629
46314 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46315 36 3.58965 0.11299 3.63221 2.94165 36 - -
46316 1.38629 1.38629 1.38629 1.38629
46317 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46318 37 3.22866 2.68399 3.27137 0.15765 37 - -
46319 1.38629 1.38629 1.38629 1.38629
46320 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46321 38 3.22866 2.68399 3.27137 0.15765 38 - -
46322 1.38629 1.38629 1.38629 1.38629
46323 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46324 39 0.12511 3.51682 2.89001 3.43172 39 - -
46325 1.38629 1.38629 1.38629 1.38629
46326 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46327 40 0.12511 3.51682 2.89001 3.43172 40 - -
46328 1.38629 1.38629 1.38629 1.38629
46329 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46330 41 3.04057 3.72442 0.10324 3.64370 41 - -
46331 1.38629 1.38629 1.38629 1.38629
46332 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46333 42 3.58965 0.11299 3.63221 2.94165 42 - -
46334 1.38629 1.38629 1.38629 1.38629
46335 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46336 43 0.12511 3.51682 2.89001 3.43172 43 - -
46337 1.38629 1.38629 1.38629 1.38629
46338 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46339 44 3.22866 2.68399 3.27137 0.15765 44 - -
46340 1.38629 1.38629 1.38629 1.38629
46341 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547
46342 45 0.12511 3.51682 2.89001 3.43172 45 - -
46343 1.38629 1.38629 1.38629 1.38629
46344 0.01715 4.07458 * 1.46634 0.26236 0.00000 *
46345 //
46346 HMMER3/b [3.0 | March 2010]
46347 NAME 4_LSU_Metazoa_4_LSU_start_seven_long
46348 LENG 45
46349 ALPH DNA
46350 RF no
46351 CS no
46352 MAP yes
46353 DATE Mon Feb 27 22:55:54 2012
46354 NSEQ 11
46355 EFFN 3.386475
46356 CKSUM 2691176843
46357 STATS LOCAL MSV -7.6622 0.71931
46358 STATS LOCAL VITERBI -7.6860 0.71931
46359 STATS LOCAL FORWARD -4.0876 0.71931
46360 HMM A C G T
46361 m->m m->i m->d i->m i->i d->m d->d
46362 COMPO 1.09796 1.45969 1.60061 1.45943
46363 1.38629 1.38629 1.38629 1.38629
46364 0.03646 4.02293 4.02293 1.46634 0.26236 0.00000 *
46365 1 1.46370 2.19900 2.30983 0.58262 1 - -
46366 1.38629 1.38629 1.38629 1.38629
46367 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46368 2 3.10905 2.60814 3.15643 0.17542 2 - -
46369 1.38629 1.38629 1.38629 1.38629
46370 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46371 3 3.10905 2.60814 3.15643 0.17542 3 - -
46372 1.38629 1.38629 1.38629 1.38629
46373 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46374 4 3.10905 2.60814 3.15643 0.17542 4 - -
46375 1.38629 1.38629 1.38629 1.38629
46376 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46377 5 2.96157 3.60822 0.11494 3.51502 5 - -
46378 1.38629 1.38629 1.38629 1.38629
46379 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46380 6 0.13926 3.40047 2.81503 3.30406 6 - -
46381 1.38629 1.38629 1.38629 1.38629
46382 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46383 7 3.45638 0.12747 3.50485 2.84591 7 - -
46384 1.38629 1.38629 1.38629 1.38629
46385 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46386 8 3.45638 0.12747 3.50485 2.84591 8 - -
46387 1.38629 1.38629 1.38629 1.38629
46388 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46389 9 3.10905 2.60814 3.15643 0.17542 9 - -
46390 1.38629 1.38629 1.38629 1.38629
46391 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46392 10 3.45638 0.12747 3.50485 2.84591 10 - -
46393 1.38629 1.38629 1.38629 1.38629
46394 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46395 11 0.13926 3.40047 2.81503 3.30406 11 - -
46396 1.38629 1.38629 1.38629 1.38629
46397 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46398 12 2.96157 3.60822 0.11494 3.51502 12 - -
46399 1.38629 1.38629 1.38629 1.38629
46400 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46401 13 0.13926 3.40047 2.81503 3.30406 13 - -
46402 1.38629 1.38629 1.38629 1.38629
46403 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46404 14 3.10905 2.60814 3.15643 0.17542 14 - -
46405 1.38629 1.38629 1.38629 1.38629
46406 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46407 15 3.10905 2.60814 3.15643 0.17542 15 - -
46408 1.38629 1.38629 1.38629 1.38629
46409 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46410 16 0.13926 3.40047 2.81503 3.30406 16 - -
46411 1.38629 1.38629 1.38629 1.38629
46412 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46413 17 2.96157 3.60822 0.11494 3.51502 17 - -
46414 1.38629 1.38629 1.38629 1.38629
46415 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46416 18 0.13926 3.40047 2.81503 3.30406 18 - -
46417 1.38629 1.38629 1.38629 1.38629
46418 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46419 19 3.45638 0.12747 3.50485 2.84591 19 - -
46420 1.38629 1.38629 1.38629 1.38629
46421 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46422 20 2.96157 3.60822 0.11494 3.51502 20 - -
46423 1.38629 1.38629 1.38629 1.38629
46424 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46425 21 0.13926 3.40047 2.81503 3.30406 21 - -
46426 1.38629 1.38629 1.38629 1.38629
46427 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46428 22 2.96157 3.60822 0.11494 3.51502 22 - -
46429 1.38629 1.38629 1.38629 1.38629
46430 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46431 23 0.13926 3.40047 2.81503 3.30406 23 - -
46432 1.38629 1.38629 1.38629 1.38629
46433 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46434 24 0.13926 3.40047 2.81503 3.30406 24 - -
46435 1.38629 1.38629 1.38629 1.38629
46436 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46437 25 0.13926 3.40047 2.81503 3.30406 25 - -
46438 1.38629 1.38629 1.38629 1.38629
46439 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46440 26 0.13926 3.40047 2.81503 3.30406 26 - -
46441 1.38629 1.38629 1.38629 1.38629
46442 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46443 27 3.45638 0.12747 3.50485 2.84591 27 - -
46444 1.38629 1.38629 1.38629 1.38629
46445 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46446 28 3.45638 0.12747 3.50485 2.84591 28 - -
46447 1.38629 1.38629 1.38629 1.38629
46448 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46449 29 3.45638 0.12747 3.50485 2.84591 29 - -
46450 1.38629 1.38629 1.38629 1.38629
46451 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46452 30 2.96157 3.60822 0.11494 3.51502 30 - -
46453 1.38629 1.38629 1.38629 1.38629
46454 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46455 31 3.45638 0.12747 3.50485 2.84591 31 - -
46456 1.38629 1.38629 1.38629 1.38629
46457 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46458 32 3.45638 0.12747 3.50485 2.84591 32 - -
46459 1.38629 1.38629 1.38629 1.38629
46460 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46461 33 2.96157 3.60822 0.11494 3.51502 33 - -
46462 1.38629 1.38629 1.38629 1.38629
46463 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46464 34 0.13926 3.40047 2.81503 3.30406 34 - -
46465 1.38629 1.38629 1.38629 1.38629
46466 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46467 35 0.13926 3.40047 2.81503 3.30406 35 - -
46468 1.38629 1.38629 1.38629 1.38629
46469 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46470 36 3.10905 2.60814 3.15643 0.17542 36 - -
46471 1.38629 1.38629 1.38629 1.38629
46472 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46473 37 3.10905 2.60814 3.15643 0.17542 37 - -
46474 1.38629 1.38629 1.38629 1.38629
46475 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46476 38 3.10905 2.60814 3.15643 0.17542 38 - -
46477 1.38629 1.38629 1.38629 1.38629
46478 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46479 39 0.13926 3.40047 2.81503 3.30406 39 - -
46480 1.38629 1.38629 1.38629 1.38629
46481 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46482 40 0.13926 3.40047 2.81503 3.30406 40 - -
46483 1.38629 1.38629 1.38629 1.38629
46484 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46485 41 2.96157 3.60822 0.11494 3.51502 41 - -
46486 1.38629 1.38629 1.38629 1.38629
46487 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46488 42 3.45638 0.12747 3.50485 2.84591 42 - -
46489 1.38629 1.38629 1.38629 1.38629
46490 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46491 43 0.13926 3.40047 2.81503 3.30406 43 - -
46492 1.38629 1.38629 1.38629 1.38629
46493 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46494 44 3.10905 2.60814 3.15643 0.17542 44 - -
46495 1.38629 1.38629 1.38629 1.38629
46496 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547
46497 45 0.13926 3.40047 2.81503 3.30406 45 - -
46498 1.38629 1.38629 1.38629 1.38629
46499 0.01839 4.00487 * 1.46634 0.26236 0.00000 *
46500 //
46501 HMMER3/b [3.0 | March 2010]
46502 NAME 4_LSU_Metazoa_4_LSU_start_seventeen_long
46503 LENG 45
46504 ALPH DNA
46505 RF no
46506 CS no
46507 MAP yes
46508 DATE Mon Feb 27 22:59:03 2012
46509 NSEQ 3
46510 EFFN 3.000000
46511 CKSUM 1512331715
46512 STATS LOCAL MSV -8.1035 0.72050
46513 STATS LOCAL VITERBI -7.6844 0.72050
46514 STATS LOCAL FORWARD -3.8942 0.72050
46515 HMM A C G T
46516 m->m m->i m->d i->m i->i d->m d->d
46517 COMPO 1.22117 1.29747 1.43994 1.63500
46518 1.38629 1.38629 1.38629 1.38629
46519 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
46520 1 2.86982 3.47591 0.13017 3.36931 1 - -
46521 1.38629 1.38629 1.38629 1.38629
46522 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46523 2 2.86982 3.47591 0.13017 3.36931 2 - -
46524 1.38629 1.38629 1.38629 1.38629
46525 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46526 3 3.30705 0.14631 3.36166 2.73626 3 - -
46527 1.38629 1.38629 1.38629 1.38629
46528 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46529 4 3.30705 0.14631 3.36166 2.73626 4 - -
46530 1.38629 1.38629 1.38629 1.38629
46531 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46532 5 2.86982 3.47591 0.13017 3.36931 5 - -
46533 1.38629 1.38629 1.38629 1.38629
46534 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46535 6 0.15719 3.27118 2.73043 3.16274 6 - -
46536 1.38629 1.38629 1.38629 1.38629
46537 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46538 7 3.30705 0.14631 3.36166 2.73626 7 - -
46539 1.38629 1.38629 1.38629 1.38629
46540 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46541 8 3.30705 0.14631 3.36166 2.73626 8 - -
46542 1.38629 1.38629 1.38629 1.38629
46543 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46544 9 2.97980 2.52563 3.03204 0.19727 9 - -
46545 1.38629 1.38629 1.38629 1.38629
46546 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46547 10 3.30705 0.14631 3.36166 2.73626 10 - -
46548 1.38629 1.38629 1.38629 1.38629
46549 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46550 11 0.15719 3.27118 2.73043 3.16274 11 - -
46551 1.38629 1.38629 1.38629 1.38629
46552 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46553 12 2.86982 3.47591 0.13017 3.36931 12 - -
46554 1.38629 1.38629 1.38629 1.38629
46555 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46556 13 0.15719 3.27118 2.73043 3.16274 13 - -
46557 1.38629 1.38629 1.38629 1.38629
46558 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46559 14 2.97980 2.52563 3.03204 0.19727 14 - -
46560 1.38629 1.38629 1.38629 1.38629
46561 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46562 15 3.30705 0.14631 3.36166 2.73626 15 - -
46563 1.38629 1.38629 1.38629 1.38629
46564 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46565 16 0.15719 3.27118 2.73043 3.16274 16 - -
46566 1.38629 1.38629 1.38629 1.38629
46567 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46568 17 2.86982 3.47591 0.13017 3.36931 17 - -
46569 1.38629 1.38629 1.38629 1.38629
46570 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46571 18 2.86982 3.47591 0.13017 3.36931 18 - -
46572 1.38629 1.38629 1.38629 1.38629
46573 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46574 19 2.97980 2.52563 3.03204 0.19727 19 - -
46575 1.38629 1.38629 1.38629 1.38629
46576 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46577 20 0.15719 3.27118 2.73043 3.16274 20 - -
46578 1.38629 1.38629 1.38629 1.38629
46579 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46580 21 0.15719 3.27118 2.73043 3.16274 21 - -
46581 1.38629 1.38629 1.38629 1.38629
46582 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46583 22 2.86982 3.47591 0.13017 3.36931 22 - -
46584 1.38629 1.38629 1.38629 1.38629
46585 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46586 23 0.15719 3.27118 2.73043 3.16274 23 - -
46587 1.38629 1.38629 1.38629 1.38629
46588 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46589 24 2.43223 0.62271 2.50508 1.22417 24 - -
46590 1.38629 1.38629 1.38629 1.38629
46591 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46592 25 2.97980 2.52563 3.03204 0.19727 25 - -
46593 1.38629 1.38629 1.38629 1.38629
46594 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46595 26 0.15719 3.27118 2.73043 3.16274 26 - -
46596 1.38629 1.38629 1.38629 1.38629
46597 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46598 27 3.30705 0.14631 3.36166 2.73626 27 - -
46599 1.38629 1.38629 1.38629 1.38629
46600 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46601 28 3.30705 0.14631 3.36166 2.73626 28 - -
46602 1.38629 1.38629 1.38629 1.38629
46603 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46604 29 3.30705 0.14631 3.36166 2.73626 29 - -
46605 1.38629 1.38629 1.38629 1.38629
46606 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46607 30 2.86982 3.47591 0.13017 3.36931 30 - -
46608 1.38629 1.38629 1.38629 1.38629
46609 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46610 31 3.30705 0.14631 3.36166 2.73626 31 - -
46611 1.38629 1.38629 1.38629 1.38629
46612 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46613 32 3.30705 0.14631 3.36166 2.73626 32 - -
46614 1.38629 1.38629 1.38629 1.38629
46615 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46616 33 2.86982 3.47591 0.13017 3.36931 33 - -
46617 1.38629 1.38629 1.38629 1.38629
46618 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46619 34 0.15719 3.27118 2.73043 3.16274 34 - -
46620 1.38629 1.38629 1.38629 1.38629
46621 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46622 35 0.15719 3.27118 2.73043 3.16274 35 - -
46623 1.38629 1.38629 1.38629 1.38629
46624 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46625 36 2.97980 2.52563 3.03204 0.19727 36 - -
46626 1.38629 1.38629 1.38629 1.38629
46627 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46628 37 2.97980 2.52563 3.03204 0.19727 37 - -
46629 1.38629 1.38629 1.38629 1.38629
46630 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46631 38 2.97980 2.52563 3.03204 0.19727 38 - -
46632 1.38629 1.38629 1.38629 1.38629
46633 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46634 39 0.15719 3.27118 2.73043 3.16274 39 - -
46635 1.38629 1.38629 1.38629 1.38629
46636 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46637 40 0.15719 3.27118 2.73043 3.16274 40 - -
46638 1.38629 1.38629 1.38629 1.38629
46639 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46640 41 2.86982 3.47591 0.13017 3.36931 41 - -
46641 1.38629 1.38629 1.38629 1.38629
46642 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46643 42 3.30705 0.14631 3.36166 2.73626 42 - -
46644 1.38629 1.38629 1.38629 1.38629
46645 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46646 43 0.15719 3.27118 2.73043 3.16274 43 - -
46647 1.38629 1.38629 1.38629 1.38629
46648 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46649 44 2.97980 2.52563 3.03204 0.19727 44 - -
46650 1.38629 1.38629 1.38629 1.38629
46651 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
46652 45 0.15719 3.27118 2.73043 3.16274 45 - -
46653 1.38629 1.38629 1.38629 1.38629
46654 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
46655 //
46656 HMMER3/b [3.0 | March 2010]
46657 NAME 4_LSU_Metazoa_4_LSU_start_sixa_long
46658 LENG 45
46659 ALPH DNA
46660 RF no
46661 CS no
46662 MAP yes
46663 DATE Mon Feb 27 22:54:30 2012
46664 NSEQ 18
46665 EFFN 3.563965
46666 CKSUM 135894155
46667 STATS LOCAL MSV -7.5770 0.71933
46668 STATS LOCAL VITERBI -7.7641 0.71933
46669 STATS LOCAL FORWARD -4.1313 0.71933
46670 HMM A C G T
46671 m->m m->i m->d i->m i->i d->m d->d
46672 COMPO 1.24017 1.30645 1.59844 1.43686
46673 1.38629 1.38629 1.38629 1.38629
46674 0.03531 4.05421 4.05421 1.46634 0.26236 0.00000 *
46675 1 3.16417 2.64312 3.20941 0.16696 1 - -
46676 1.38629 1.38629 1.38629 1.38629
46677 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46678 2 3.16417 2.64312 3.20941 0.16696 2 - -
46679 1.38629 1.38629 1.38629 1.38629
46680 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46681 3 3.16417 2.64312 3.20941 0.16696 3 - -
46682 1.38629 1.38629 1.38629 1.38629
46683 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46684 4 3.51842 0.12048 3.56419 2.89070 4 - -
46685 1.38629 1.38629 1.38629 1.38629
46686 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46687 5 2.99862 3.66252 0.10930 3.57508 5 - -
46688 1.38629 1.38629 1.38629 1.38629
46689 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46690 6 0.13247 3.45449 2.84993 3.36328 6 - -
46691 1.38629 1.38629 1.38629 1.38629
46692 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46693 7 3.51842 0.12048 3.56419 2.89070 7 - -
46694 1.38629 1.38629 1.38629 1.38629
46695 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46696 8 3.51842 0.12048 3.56419 2.89070 8 - -
46697 1.38629 1.38629 1.38629 1.38629
46698 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46699 9 3.16417 2.64312 3.20941 0.16696 9 - -
46700 1.38629 1.38629 1.38629 1.38629
46701 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46702 10 2.99862 3.66252 0.10930 3.57508 10 - -
46703 1.38629 1.38629 1.38629 1.38629
46704 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46705 11 0.13247 3.45449 2.84993 3.36328 11 - -
46706 1.38629 1.38629 1.38629 1.38629
46707 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46708 12 0.13247 3.45449 2.84993 3.36328 12 - -
46709 1.38629 1.38629 1.38629 1.38629
46710 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46711 13 3.06631 0.23765 3.12667 2.11143 13 - -
46712 1.38629 1.38629 1.38629 1.38629
46713 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46714 14 3.16417 2.64312 3.20941 0.16696 14 - -
46715 1.38629 1.38629 1.38629 1.38629
46716 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46717 15 3.51842 0.12048 3.56419 2.89070 15 - -
46718 1.38629 1.38629 1.38629 1.38629
46719 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46720 16 0.13247 3.45449 2.84993 3.36328 16 - -
46721 1.38629 1.38629 1.38629 1.38629
46722 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46723 17 2.99862 3.66252 0.10930 3.57508 17 - -
46724 1.38629 1.38629 1.38629 1.38629
46725 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46726 18 0.13247 3.45449 2.84993 3.36328 18 - -
46727 1.38629 1.38629 1.38629 1.38629
46728 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46729 19 3.51842 0.12048 3.56419 2.89070 19 - -
46730 1.38629 1.38629 1.38629 1.38629
46731 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46732 20 2.99862 3.66252 0.10930 3.57508 20 - -
46733 1.38629 1.38629 1.38629 1.38629
46734 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46735 21 3.16417 2.64312 3.20941 0.16696 21 - -
46736 1.38629 1.38629 1.38629 1.38629
46737 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46738 22 2.99862 3.66252 0.10930 3.57508 22 - -
46739 1.38629 1.38629 1.38629 1.38629
46740 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46741 23 0.13247 3.45449 2.84993 3.36328 23 - -
46742 1.38629 1.38629 1.38629 1.38629
46743 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46744 24 0.66567 2.24869 1.69048 1.62913 24 - -
46745 1.38629 1.38629 1.38629 1.38629
46746 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46747 25 2.50555 1.22857 2.57478 0.59877 25 - -
46748 1.38629 1.38629 1.38629 1.38629
46749 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46750 26 0.13247 3.45449 2.84993 3.36328 26 - -
46751 1.38629 1.38629 1.38629 1.38629
46752 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46753 27 3.51842 0.12048 3.56419 2.89070 27 - -
46754 1.38629 1.38629 1.38629 1.38629
46755 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46756 28 3.51842 0.12048 3.56419 2.89070 28 - -
46757 1.38629 1.38629 1.38629 1.38629
46758 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46759 29 3.51842 0.12048 3.56419 2.89070 29 - -
46760 1.38629 1.38629 1.38629 1.38629
46761 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46762 30 2.99862 3.66252 0.10930 3.57508 30 - -
46763 1.38629 1.38629 1.38629 1.38629
46764 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46765 31 3.51842 0.12048 3.56419 2.89070 31 - -
46766 1.38629 1.38629 1.38629 1.38629
46767 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46768 32 3.16417 2.64312 3.20941 0.16696 32 - -
46769 1.38629 1.38629 1.38629 1.38629
46770 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46771 33 2.99862 3.66252 0.10930 3.57508 33 - -
46772 1.38629 1.38629 1.38629 1.38629
46773 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46774 34 0.13247 3.45449 2.84993 3.36328 34 - -
46775 1.38629 1.38629 1.38629 1.38629
46776 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46777 35 0.13247 3.45449 2.84993 3.36328 35 - -
46778 1.38629 1.38629 1.38629 1.38629
46779 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46780 36 3.51842 0.12048 3.56419 2.89070 36 - -
46781 1.38629 1.38629 1.38629 1.38629
46782 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46783 37 3.16417 2.64312 3.20941 0.16696 37 - -
46784 1.38629 1.38629 1.38629 1.38629
46785 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46786 38 3.16417 2.64312 3.20941 0.16696 38 - -
46787 1.38629 1.38629 1.38629 1.38629
46788 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46789 39 0.13247 3.45449 2.84993 3.36328 39 - -
46790 1.38629 1.38629 1.38629 1.38629
46791 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46792 40 0.13247 3.45449 2.84993 3.36328 40 - -
46793 1.38629 1.38629 1.38629 1.38629
46794 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46795 41 2.99862 3.66252 0.10930 3.57508 41 - -
46796 1.38629 1.38629 1.38629 1.38629
46797 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46798 42 3.51842 0.12048 3.56419 2.89070 42 - -
46799 1.38629 1.38629 1.38629 1.38629
46800 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46801 43 0.13247 3.45449 2.84993 3.36328 43 - -
46802 1.38629 1.38629 1.38629 1.38629
46803 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46804 44 3.16417 2.64312 3.20941 0.16696 44 - -
46805 1.38629 1.38629 1.38629 1.38629
46806 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547
46807 45 0.13247 3.45449 2.84993 3.36328 45 - -
46808 1.38629 1.38629 1.38629 1.38629
46809 0.01781 4.03671 * 1.46634 0.26236 0.00000 *
46810 //
46811 HMMER3/b [3.0 | March 2010]
46812 NAME 4_LSU_Metazoa_4_LSU_start_sixb_long
46813 LENG 45
46814 ALPH DNA
46815 RF no
46816 CS no
46817 MAP yes
46818 DATE Mon Feb 27 22:54:37 2012
46819 NSEQ 4
46820 EFFN 3.363281
46821 CKSUM 3601354860
46822 STATS LOCAL MSV -8.0016 0.71931
46823 STATS LOCAL VITERBI -7.7630 0.71931
46824 STATS LOCAL FORWARD -4.1610 0.71931
46825 HMM A C G T
46826 m->m m->i m->d i->m i->i d->m d->d
46827 COMPO 1.27366 1.29926 1.52617 1.46927
46828 1.38629 1.38629 1.38629 1.38629
46829 0.03661 4.01877 4.01877 1.46634 0.26236 0.00000 *
46830 1 0.14020 3.39317 2.81030 3.29606 1 - -
46831 1.38629 1.38629 1.38629 1.38629
46832 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46833 2 3.10166 2.60344 3.14932 0.17659 2 - -
46834 1.38629 1.38629 1.38629 1.38629
46835 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46836 3 2.41261 0.95620 2.48463 0.81484 3 - -
46837 1.38629 1.38629 1.38629 1.38629
46838 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46839 4 3.44798 0.12845 3.49681 2.83981 4 - -
46840 1.38629 1.38629 1.38629 1.38629
46841 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46842 5 2.95651 3.60084 0.11574 3.50687 5 - -
46843 1.38629 1.38629 1.38629 1.38629
46844 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46845 6 0.14020 3.39317 2.81030 3.29606 6 - -
46846 1.38629 1.38629 1.38629 1.38629
46847 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46848 7 3.44798 0.12845 3.49681 2.83981 7 - -
46849 1.38629 1.38629 1.38629 1.38629
46850 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46851 8 3.44798 0.12845 3.49681 2.83981 8 - -
46852 1.38629 1.38629 1.38629 1.38629
46853 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46854 9 3.10166 2.60344 3.14932 0.17659 9 - -
46855 1.38629 1.38629 1.38629 1.38629
46856 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46857 10 2.95651 3.60084 0.11574 3.50687 10 - -
46858 1.38629 1.38629 1.38629 1.38629
46859 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46860 11 0.14020 3.39317 2.81030 3.29606 11 - -
46861 1.38629 1.38629 1.38629 1.38629
46862 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46863 12 0.14020 3.39317 2.81030 3.29606 12 - -
46864 1.38629 1.38629 1.38629 1.38629
46865 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46866 13 3.44798 0.12845 3.49681 2.83981 13 - -
46867 1.38629 1.38629 1.38629 1.38629
46868 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46869 14 3.10166 2.60344 3.14932 0.17659 14 - -
46870 1.38629 1.38629 1.38629 1.38629
46871 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46872 15 3.44798 0.12845 3.49681 2.83981 15 - -
46873 1.38629 1.38629 1.38629 1.38629
46874 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46875 16 0.14020 3.39317 2.81030 3.29606 16 - -
46876 1.38629 1.38629 1.38629 1.38629
46877 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46878 17 2.95651 3.60084 0.11574 3.50687 17 - -
46879 1.38629 1.38629 1.38629 1.38629
46880 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46881 18 0.14020 3.39317 2.81030 3.29606 18 - -
46882 1.38629 1.38629 1.38629 1.38629
46883 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46884 19 3.44798 0.12845 3.49681 2.83981 19 - -
46885 1.38629 1.38629 1.38629 1.38629
46886 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46887 20 2.95651 3.60084 0.11574 3.50687 20 - -
46888 1.38629 1.38629 1.38629 1.38629
46889 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46890 21 3.10166 2.60344 3.14932 0.17659 21 - -
46891 1.38629 1.38629 1.38629 1.38629
46892 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46893 22 2.95651 3.60084 0.11574 3.50687 22 - -
46894 1.38629 1.38629 1.38629 1.38629
46895 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46896 23 2.95651 3.60084 0.11574 3.50687 23 - -
46897 1.38629 1.38629 1.38629 1.38629
46898 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46899 24 3.10166 2.60344 3.14932 0.17659 24 - -
46900 1.38629 1.38629 1.38629 1.38629
46901 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46902 25 3.10166 2.60344 3.14932 0.17659 25 - -
46903 1.38629 1.38629 1.38629 1.38629
46904 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46905 26 0.14020 3.39317 2.81030 3.29606 26 - -
46906 1.38629 1.38629 1.38629 1.38629
46907 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46908 27 3.44798 0.12845 3.49681 2.83981 27 - -
46909 1.38629 1.38629 1.38629 1.38629
46910 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46911 28 3.44798 0.12845 3.49681 2.83981 28 - -
46912 1.38629 1.38629 1.38629 1.38629
46913 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46914 29 3.44798 0.12845 3.49681 2.83981 29 - -
46915 1.38629 1.38629 1.38629 1.38629
46916 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46917 30 2.95651 3.60084 0.11574 3.50687 30 - -
46918 1.38629 1.38629 1.38629 1.38629
46919 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46920 31 3.44798 0.12845 3.49681 2.83981 31 - -
46921 1.38629 1.38629 1.38629 1.38629
46922 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46923 32 3.10166 2.60344 3.14932 0.17659 32 - -
46924 1.38629 1.38629 1.38629 1.38629
46925 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46926 33 2.95651 3.60084 0.11574 3.50687 33 - -
46927 1.38629 1.38629 1.38629 1.38629
46928 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46929 34 0.14020 3.39317 2.81030 3.29606 34 - -
46930 1.38629 1.38629 1.38629 1.38629
46931 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46932 35 0.14020 3.39317 2.81030 3.29606 35 - -
46933 1.38629 1.38629 1.38629 1.38629
46934 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46935 36 3.44798 0.12845 3.49681 2.83981 36 - -
46936 1.38629 1.38629 1.38629 1.38629
46937 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46938 37 3.10166 2.60344 3.14932 0.17659 37 - -
46939 1.38629 1.38629 1.38629 1.38629
46940 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46941 38 3.10166 2.60344 3.14932 0.17659 38 - -
46942 1.38629 1.38629 1.38629 1.38629
46943 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46944 39 0.14020 3.39317 2.81030 3.29606 39 - -
46945 1.38629 1.38629 1.38629 1.38629
46946 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46947 40 0.14020 3.39317 2.81030 3.29606 40 - -
46948 1.38629 1.38629 1.38629 1.38629
46949 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46950 41 2.95651 3.60084 0.11574 3.50687 41 - -
46951 1.38629 1.38629 1.38629 1.38629
46952 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46953 42 3.44798 0.12845 3.49681 2.83981 42 - -
46954 1.38629 1.38629 1.38629 1.38629
46955 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46956 43 0.14020 3.39317 2.81030 3.29606 43 - -
46957 1.38629 1.38629 1.38629 1.38629
46958 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46959 44 3.10166 2.60344 3.14932 0.17659 44 - -
46960 1.38629 1.38629 1.38629 1.38629
46961 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547
46962 45 0.14020 3.39317 2.81030 3.29606 45 - -
46963 1.38629 1.38629 1.38629 1.38629
46964 0.01847 4.00063 * 1.46634 0.26236 0.00000 *
46965 //
46966 HMMER3/b [3.0 | March 2010]
46967 NAME 4_LSU_Metazoa_4_LSU_start_sixc_long
46968 LENG 45
46969 ALPH DNA
46970 RF no
46971 CS no
46972 MAP yes
46973 DATE Mon Feb 27 22:54:52 2012
46974 NSEQ 7
46975 EFFN 3.359863
46976 CKSUM 2609358306
46977 STATS LOCAL MSV -8.0369 0.71932
46978 STATS LOCAL VITERBI -7.7132 0.71932
46979 STATS LOCAL FORWARD -4.2915 0.71932
46980 HMM A C G T
46981 m->m m->i m->d i->m i->i d->m d->d
46982 COMPO 1.27593 1.29455 1.52632 1.47197
46983 1.38629 1.38629 1.38629 1.38629
46984 0.03664 4.01816 4.01816 1.46634 0.26236 0.00000 *
46985 1 3.10057 2.60274 3.14826 0.17676 1 - -
46986 1.38629 1.38629 1.38629 1.38629
46987 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
46988 2 3.10057 2.60274 3.14826 0.17676 2 - -
46989 1.38629 1.38629 1.38629 1.38629
46990 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
46991 3 3.10057 2.60274 3.14826 0.17676 3 - -
46992 1.38629 1.38629 1.38629 1.38629
46993 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
46994 4 3.44674 0.12859 3.49562 2.83891 4 - -
46995 1.38629 1.38629 1.38629 1.38629
46996 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
46997 5 2.95576 3.59975 0.11586 3.50566 5 - -
46998 1.38629 1.38629 1.38629 1.38629
46999 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47000 6 0.14034 3.39209 2.80960 3.29488 6 - -
47001 1.38629 1.38629 1.38629 1.38629
47002 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47003 7 3.44674 0.12859 3.49562 2.83891 7 - -
47004 1.38629 1.38629 1.38629 1.38629
47005 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47006 8 3.44674 0.12859 3.49562 2.83891 8 - -
47007 1.38629 1.38629 1.38629 1.38629
47008 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47009 9 3.10057 2.60274 3.14826 0.17676 9 - -
47010 1.38629 1.38629 1.38629 1.38629
47011 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47012 10 2.95576 3.59975 0.11586 3.50566 10 - -
47013 1.38629 1.38629 1.38629 1.38629
47014 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47015 11 0.14034 3.39209 2.80960 3.29488 11 - -
47016 1.38629 1.38629 1.38629 1.38629
47017 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47018 12 0.14034 3.39209 2.80960 3.29488 12 - -
47019 1.38629 1.38629 1.38629 1.38629
47020 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47021 13 3.44674 0.12859 3.49562 2.83891 13 - -
47022 1.38629 1.38629 1.38629 1.38629
47023 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47024 14 3.10057 2.60274 3.14826 0.17676 14 - -
47025 1.38629 1.38629 1.38629 1.38629
47026 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47027 15 3.44674 0.12859 3.49562 2.83891 15 - -
47028 1.38629 1.38629 1.38629 1.38629
47029 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47030 16 0.14034 3.39209 2.80960 3.29488 16 - -
47031 1.38629 1.38629 1.38629 1.38629
47032 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47033 17 0.14034 3.39209 2.80960 3.29488 17 - -
47034 1.38629 1.38629 1.38629 1.38629
47035 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47036 18 2.95576 3.59975 0.11586 3.50566 18 - -
47037 1.38629 1.38629 1.38629 1.38629
47038 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47039 19 3.44674 0.12859 3.49562 2.83891 19 - -
47040 1.38629 1.38629 1.38629 1.38629
47041 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47042 20 2.95576 3.59975 0.11586 3.50566 20 - -
47043 1.38629 1.38629 1.38629 1.38629
47044 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47045 21 3.10057 2.60274 3.14826 0.17676 21 - -
47046 1.38629 1.38629 1.38629 1.38629
47047 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47048 22 2.95576 3.59975 0.11586 3.50566 22 - -
47049 1.38629 1.38629 1.38629 1.38629
47050 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47051 23 0.14034 3.39209 2.80960 3.29488 23 - -
47052 1.38629 1.38629 1.38629 1.38629
47053 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47054 24 2.95576 3.59975 0.11586 3.50566 24 - -
47055 1.38629 1.38629 1.38629 1.38629
47056 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47057 25 2.42382 0.79725 2.49629 0.97165 25 - -
47058 1.38629 1.38629 1.38629 1.38629
47059 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47060 26 0.14034 3.39209 2.80960 3.29488 26 - -
47061 1.38629 1.38629 1.38629 1.38629
47062 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47063 27 3.44674 0.12859 3.49562 2.83891 27 - -
47064 1.38629 1.38629 1.38629 1.38629
47065 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47066 28 3.44674 0.12859 3.49562 2.83891 28 - -
47067 1.38629 1.38629 1.38629 1.38629
47068 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47069 29 3.44674 0.12859 3.49562 2.83891 29 - -
47070 1.38629 1.38629 1.38629 1.38629
47071 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47072 30 2.95576 3.59975 0.11586 3.50566 30 - -
47073 1.38629 1.38629 1.38629 1.38629
47074 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47075 31 3.44674 0.12859 3.49562 2.83891 31 - -
47076 1.38629 1.38629 1.38629 1.38629
47077 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47078 32 3.10057 2.60274 3.14826 0.17676 32 - -
47079 1.38629 1.38629 1.38629 1.38629
47080 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47081 33 2.95576 3.59975 0.11586 3.50566 33 - -
47082 1.38629 1.38629 1.38629 1.38629
47083 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47084 34 0.14034 3.39209 2.80960 3.29488 34 - -
47085 1.38629 1.38629 1.38629 1.38629
47086 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47087 35 0.14034 3.39209 2.80960 3.29488 35 - -
47088 1.38629 1.38629 1.38629 1.38629
47089 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47090 36 3.44674 0.12859 3.49562 2.83891 36 - -
47091 1.38629 1.38629 1.38629 1.38629
47092 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47093 37 3.10057 2.60274 3.14826 0.17676 37 - -
47094 1.38629 1.38629 1.38629 1.38629
47095 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47096 38 3.10057 2.60274 3.14826 0.17676 38 - -
47097 1.38629 1.38629 1.38629 1.38629
47098 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47099 39 0.14034 3.39209 2.80960 3.29488 39 - -
47100 1.38629 1.38629 1.38629 1.38629
47101 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47102 40 0.14034 3.39209 2.80960 3.29488 40 - -
47103 1.38629 1.38629 1.38629 1.38629
47104 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47105 41 2.95576 3.59975 0.11586 3.50566 41 - -
47106 1.38629 1.38629 1.38629 1.38629
47107 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47108 42 3.44674 0.12859 3.49562 2.83891 42 - -
47109 1.38629 1.38629 1.38629 1.38629
47110 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47111 43 0.14034 3.39209 2.80960 3.29488 43 - -
47112 1.38629 1.38629 1.38629 1.38629
47113 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47114 44 3.10057 2.60274 3.14826 0.17676 44 - -
47115 1.38629 1.38629 1.38629 1.38629
47116 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547
47117 45 0.14034 3.39209 2.80960 3.29488 45 - -
47118 1.38629 1.38629 1.38629 1.38629
47119 0.01849 4.00001 * 1.46634 0.26236 0.00000 *
47120 //
47121 HMMER3/b [3.0 | March 2010]
47122 NAME 4_LSU_Metazoa_4_LSU_start_sixd_long
47123 LENG 45
47124 ALPH DNA
47125 RF no
47126 CS no
47127 MAP yes
47128 DATE Mon Feb 27 22:54:59 2012
47129 NSEQ 4
47130 EFFN 3.339844
47131 CKSUM 231546967
47132 STATS LOCAL MSV -8.0309 0.71933
47133 STATS LOCAL VITERBI -7.7157 0.71933
47134 STATS LOCAL FORWARD -4.0543 0.71933
47135 HMM A C G T
47136 m->m m->i m->d i->m i->i d->m d->d
47137 COMPO 1.23306 1.38825 1.51451 1.43057
47138 1.38629 1.38629 1.38629 1.38629
47139 0.03677 4.01455 4.01455 1.46634 0.26236 0.00000 *
47140 1 3.09414 2.59866 3.14209 0.17779 1 - -
47141 1.38629 1.38629 1.38629 1.38629
47142 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47143 2 3.09414 2.59866 3.14209 0.17779 2 - -
47144 1.38629 1.38629 1.38629 1.38629
47145 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47146 3 3.09414 2.59866 3.14209 0.17779 3 - -
47147 1.38629 1.38629 1.38629 1.38629
47148 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47149 4 3.43942 0.12946 3.48861 2.83359 4 - -
47150 1.38629 1.38629 1.38629 1.38629
47151 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47152 5 2.95135 3.59331 0.11655 3.49856 5 - -
47153 1.38629 1.38629 1.38629 1.38629
47154 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47155 6 0.14117 3.38574 2.80548 3.28793 6 - -
47156 1.38629 1.38629 1.38629 1.38629
47157 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47158 7 3.43942 0.12946 3.48861 2.83359 7 - -
47159 1.38629 1.38629 1.38629 1.38629
47160 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47161 8 3.43942 0.12946 3.48861 2.83359 8 - -
47162 1.38629 1.38629 1.38629 1.38629
47163 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47164 9 3.09414 2.59866 3.14209 0.17779 9 - -
47165 1.38629 1.38629 1.38629 1.38629
47166 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47167 10 2.95135 3.59331 0.11655 3.49856 10 - -
47168 1.38629 1.38629 1.38629 1.38629
47169 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47170 11 0.14117 3.38574 2.80548 3.28793 11 - -
47171 1.38629 1.38629 1.38629 1.38629
47172 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47173 12 2.95135 3.59331 0.11655 3.49856 12 - -
47174 1.38629 1.38629 1.38629 1.38629
47175 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47176 13 3.43942 0.12946 3.48861 2.83359 13 - -
47177 1.38629 1.38629 1.38629 1.38629
47178 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47179 14 3.09414 2.59866 3.14209 0.17779 14 - -
47180 1.38629 1.38629 1.38629 1.38629
47181 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47182 15 0.14117 3.38574 2.80548 3.28793 15 - -
47183 1.38629 1.38629 1.38629 1.38629
47184 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47185 16 0.14117 3.38574 2.80548 3.28793 16 - -
47186 1.38629 1.38629 1.38629 1.38629
47187 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47188 17 0.14117 3.38574 2.80548 3.28793 17 - -
47189 1.38629 1.38629 1.38629 1.38629
47190 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47191 18 2.95135 3.59331 0.11655 3.49856 18 - -
47192 1.38629 1.38629 1.38629 1.38629
47193 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47194 19 3.43942 0.12946 3.48861 2.83359 19 - -
47195 1.38629 1.38629 1.38629 1.38629
47196 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47197 20 2.95135 3.59331 0.11655 3.49856 20 - -
47198 1.38629 1.38629 1.38629 1.38629
47199 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47200 21 3.09414 2.59866 3.14209 0.17779 21 - -
47201 1.38629 1.38629 1.38629 1.38629
47202 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47203 22 2.95135 3.59331 0.11655 3.49856 22 - -
47204 1.38629 1.38629 1.38629 1.38629
47205 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47206 23 0.14117 3.38574 2.80548 3.28793 23 - -
47207 1.38629 1.38629 1.38629 1.38629
47208 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47209 24 0.39569 2.76637 1.65002 2.63317 24 - -
47210 1.38629 1.38629 1.38629 1.38629
47211 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47212 25 3.09414 2.59866 3.14209 0.17779 25 - -
47213 1.38629 1.38629 1.38629 1.38629
47214 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47215 26 0.14117 3.38574 2.80548 3.28793 26 - -
47216 1.38629 1.38629 1.38629 1.38629
47217 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47218 27 3.43942 0.12946 3.48861 2.83359 27 - -
47219 1.38629 1.38629 1.38629 1.38629
47220 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47221 28 3.43942 0.12946 3.48861 2.83359 28 - -
47222 1.38629 1.38629 1.38629 1.38629
47223 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47224 29 3.43942 0.12946 3.48861 2.83359 29 - -
47225 1.38629 1.38629 1.38629 1.38629
47226 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47227 30 2.95135 3.59331 0.11655 3.49856 30 - -
47228 1.38629 1.38629 1.38629 1.38629
47229 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47230 31 3.43942 0.12946 3.48861 2.83359 31 - -
47231 1.38629 1.38629 1.38629 1.38629
47232 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47233 32 3.09414 2.59866 3.14209 0.17779 32 - -
47234 1.38629 1.38629 1.38629 1.38629
47235 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47236 33 2.95135 3.59331 0.11655 3.49856 33 - -
47237 1.38629 1.38629 1.38629 1.38629
47238 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47239 34 0.14117 3.38574 2.80548 3.28793 34 - -
47240 1.38629 1.38629 1.38629 1.38629
47241 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47242 35 0.14117 3.38574 2.80548 3.28793 35 - -
47243 1.38629 1.38629 1.38629 1.38629
47244 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47245 36 3.43942 0.12946 3.48861 2.83359 36 - -
47246 1.38629 1.38629 1.38629 1.38629
47247 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47248 37 3.09414 2.59866 3.14209 0.17779 37 - -
47249 1.38629 1.38629 1.38629 1.38629
47250 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47251 38 3.09414 2.59866 3.14209 0.17779 38 - -
47252 1.38629 1.38629 1.38629 1.38629
47253 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47254 39 0.14117 3.38574 2.80548 3.28793 39 - -
47255 1.38629 1.38629 1.38629 1.38629
47256 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47257 40 0.14117 3.38574 2.80548 3.28793 40 - -
47258 1.38629 1.38629 1.38629 1.38629
47259 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47260 41 2.95135 3.59331 0.11655 3.49856 41 - -
47261 1.38629 1.38629 1.38629 1.38629
47262 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47263 42 3.43942 0.12946 3.48861 2.83359 42 - -
47264 1.38629 1.38629 1.38629 1.38629
47265 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47266 43 0.14117 3.38574 2.80548 3.28793 43 - -
47267 1.38629 1.38629 1.38629 1.38629
47268 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47269 44 3.09414 2.59866 3.14209 0.17779 44 - -
47270 1.38629 1.38629 1.38629 1.38629
47271 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547
47272 45 0.14117 3.38574 2.80548 3.28793 45 - -
47273 1.38629 1.38629 1.38629 1.38629
47274 0.01855 3.99634 * 1.46634 0.26236 0.00000 *
47275 //
47276 HMMER3/b [3.0 | March 2010]
47277 NAME 4_LSU_Metazoa_4_LSU_start_sixe_long
47278 LENG 45
47279 ALPH DNA
47280 RF no
47281 CS no
47282 MAP yes
47283 DATE Mon Feb 27 22:55:04 2012
47284 NSEQ 2
47285 EFFN 2.000000
47286 CKSUM 1628112068
47287 STATS LOCAL MSV -7.5032 0.72841
47288 STATS LOCAL VITERBI -8.3390 0.72841
47289 STATS LOCAL FORWARD -3.4341 0.72841
47290 HMM A C G T
47291 m->m m->i m->d i->m i->i d->m d->d
47292 COMPO 1.28858 1.32680 1.43161 1.51373
47293 1.38629 1.38629 1.38629 1.38629
47294 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
47295 1 2.57915 2.25909 2.64442 0.28946 1 - -
47296 1.38629 1.38629 1.38629 1.38629
47297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47298 2 2.57915 2.25909 2.64442 0.28946 2 - -
47299 1.38629 1.38629 1.38629 1.38629
47300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47301 3 2.57915 2.25909 2.64442 0.28946 3 - -
47302 1.38629 1.38629 1.38629 1.38629
47303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47304 4 2.81865 0.23582 2.88868 2.35662 4 - -
47305 1.38629 1.38629 1.38629 1.38629
47306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47307 5 2.53331 3.02441 0.20344 2.88069 5 - -
47308 1.38629 1.38629 1.38629 1.38629
47309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47310 6 0.23862 2.84929 2.43386 2.70756 6 - -
47311 1.38629 1.38629 1.38629 1.38629
47312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47313 7 2.81865 0.23582 2.88868 2.35662 7 - -
47314 1.38629 1.38629 1.38629 1.38629
47315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47316 8 2.81865 0.23582 2.88868 2.35662 8 - -
47317 1.38629 1.38629 1.38629 1.38629
47318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47319 9 2.57915 2.25909 2.64442 0.28946 9 - -
47320 1.38629 1.38629 1.38629 1.38629
47321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47322 10 2.53331 3.02441 0.20344 2.88069 10 - -
47323 1.38629 1.38629 1.38629 1.38629
47324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47325 11 0.23862 2.84929 2.43386 2.70756 11 - -
47326 1.38629 1.38629 1.38629 1.38629
47327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47328 12 0.23862 2.84929 2.43386 2.70756 12 - -
47329 1.38629 1.38629 1.38629 1.38629
47330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47331 13 2.81865 0.23582 2.88868 2.35662 13 - -
47332 1.38629 1.38629 1.38629 1.38629
47333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47334 14 2.57915 2.25909 2.64442 0.28946 14 - -
47335 1.38629 1.38629 1.38629 1.38629
47336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47337 15 2.81865 0.23582 2.88868 2.35662 15 - -
47338 1.38629 1.38629 1.38629 1.38629
47339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47340 16 0.23862 2.84929 2.43386 2.70756 16 - -
47341 1.38629 1.38629 1.38629 1.38629
47342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47343 17 2.53331 3.02441 0.20344 2.88069 17 - -
47344 1.38629 1.38629 1.38629 1.38629
47345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47346 18 2.53331 3.02441 0.20344 2.88069 18 - -
47347 1.38629 1.38629 1.38629 1.38629
47348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47349 19 2.81865 0.23582 2.88868 2.35662 19 - -
47350 1.38629 1.38629 1.38629 1.38629
47351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47352 20 2.53331 3.02441 0.20344 2.88069 20 - -
47353 1.38629 1.38629 1.38629 1.38629
47354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47355 21 0.23862 2.84929 2.43386 2.70756 21 - -
47356 1.38629 1.38629 1.38629 1.38629
47357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47358 22 2.53331 3.02441 0.20344 2.88069 22 - -
47359 1.38629 1.38629 1.38629 1.38629
47360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47361 23 0.23862 2.84929 2.43386 2.70756 23 - -
47362 1.38629 1.38629 1.38629 1.38629
47363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47364 24 2.53331 3.02441 0.20344 2.88069 24 - -
47365 1.38629 1.38629 1.38629 1.38629
47366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47367 25 2.15554 1.00938 2.23102 0.88601 25 - -
47368 1.38629 1.38629 1.38629 1.38629
47369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47370 26 0.23862 2.84929 2.43386 2.70756 26 - -
47371 1.38629 1.38629 1.38629 1.38629
47372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47373 27 2.81865 0.23582 2.88868 2.35662 27 - -
47374 1.38629 1.38629 1.38629 1.38629
47375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47376 28 2.81865 0.23582 2.88868 2.35662 28 - -
47377 1.38629 1.38629 1.38629 1.38629
47378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47379 29 2.81865 0.23582 2.88868 2.35662 29 - -
47380 1.38629 1.38629 1.38629 1.38629
47381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47382 30 2.53331 3.02441 0.20344 2.88069 30 - -
47383 1.38629 1.38629 1.38629 1.38629
47384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47385 31 2.81865 0.23582 2.88868 2.35662 31 - -
47386 1.38629 1.38629 1.38629 1.38629
47387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47388 32 2.57915 2.25909 2.64442 0.28946 32 - -
47389 1.38629 1.38629 1.38629 1.38629
47390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47391 33 2.53331 3.02441 0.20344 2.88069 33 - -
47392 1.38629 1.38629 1.38629 1.38629
47393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47394 34 0.23862 2.84929 2.43386 2.70756 34 - -
47395 1.38629 1.38629 1.38629 1.38629
47396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47397 35 0.23862 2.84929 2.43386 2.70756 35 - -
47398 1.38629 1.38629 1.38629 1.38629
47399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47400 36 2.81865 0.23582 2.88868 2.35662 36 - -
47401 1.38629 1.38629 1.38629 1.38629
47402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47403 37 2.57915 2.25909 2.64442 0.28946 37 - -
47404 1.38629 1.38629 1.38629 1.38629
47405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47406 38 2.57915 2.25909 2.64442 0.28946 38 - -
47407 1.38629 1.38629 1.38629 1.38629
47408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47409 39 0.23862 2.84929 2.43386 2.70756 39 - -
47410 1.38629 1.38629 1.38629 1.38629
47411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47412 40 0.23862 2.84929 2.43386 2.70756 40 - -
47413 1.38629 1.38629 1.38629 1.38629
47414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47415 41 2.53331 3.02441 0.20344 2.88069 41 - -
47416 1.38629 1.38629 1.38629 1.38629
47417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47418 42 2.81865 0.23582 2.88868 2.35662 42 - -
47419 1.38629 1.38629 1.38629 1.38629
47420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47421 43 0.23862 2.84929 2.43386 2.70756 43 - -
47422 1.38629 1.38629 1.38629 1.38629
47423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47424 44 2.57915 2.25909 2.64442 0.28946 44 - -
47425 1.38629 1.38629 1.38629 1.38629
47426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47427 45 0.23862 2.84929 2.43386 2.70756 45 - -
47428 1.38629 1.38629 1.38629 1.38629
47429 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
47430 //
47431 HMMER3/b [3.0 | March 2010]
47432 NAME 4_LSU_Metazoa_4_LSU_start_sixf_long
47433 LENG 45
47434 ALPH DNA
47435 RF no
47436 CS no
47437 MAP yes
47438 DATE Mon Feb 27 22:55:09 2012
47439 NSEQ 2
47440 EFFN 2.000000
47441 CKSUM 3055619897
47442 STATS LOCAL MSV -7.4441 0.72810
47443 STATS LOCAL VITERBI -8.2961 0.72810
47444 STATS LOCAL FORWARD -3.6529 0.72810
47445 HMM A C G T
47446 m->m m->i m->d i->m i->i d->m d->d
47447 COMPO 1.24155 1.29109 1.56843 1.47965
47448 1.38629 1.38629 1.38629 1.38629
47449 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
47450 1 2.57915 2.25909 2.64442 0.28946 1 - -
47451 1.38629 1.38629 1.38629 1.38629
47452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47453 2 2.57915 2.25909 2.64442 0.28946 2 - -
47454 1.38629 1.38629 1.38629 1.38629
47455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47456 3 0.23862 2.84929 2.43386 2.70756 3 - -
47457 1.38629 1.38629 1.38629 1.38629
47458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47459 4 2.57915 2.25909 2.64442 0.28946 4 - -
47460 1.38629 1.38629 1.38629 1.38629
47461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47462 5 2.53331 3.02441 0.20344 2.88069 5 - -
47463 1.38629 1.38629 1.38629 1.38629
47464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47465 6 0.23862 2.84929 2.43386 2.70756 6 - -
47466 1.38629 1.38629 1.38629 1.38629
47467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47468 7 2.81865 0.23582 2.88868 2.35662 7 - -
47469 1.38629 1.38629 1.38629 1.38629
47470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47471 8 2.81865 0.23582 2.88868 2.35662 8 - -
47472 1.38629 1.38629 1.38629 1.38629
47473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47474 9 2.57915 2.25909 2.64442 0.28946 9 - -
47475 1.38629 1.38629 1.38629 1.38629
47476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47477 10 2.53331 3.02441 0.20344 2.88069 10 - -
47478 1.38629 1.38629 1.38629 1.38629
47479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47480 11 0.23862 2.84929 2.43386 2.70756 11 - -
47481 1.38629 1.38629 1.38629 1.38629
47482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47483 12 0.23862 2.84929 2.43386 2.70756 12 - -
47484 1.38629 1.38629 1.38629 1.38629
47485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47486 13 2.81865 0.23582 2.88868 2.35662 13 - -
47487 1.38629 1.38629 1.38629 1.38629
47488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47489 14 2.57915 2.25909 2.64442 0.28946 14 - -
47490 1.38629 1.38629 1.38629 1.38629
47491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47492 15 2.81865 0.23582 2.88868 2.35662 15 - -
47493 1.38629 1.38629 1.38629 1.38629
47494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47495 16 0.23862 2.84929 2.43386 2.70756 16 - -
47496 1.38629 1.38629 1.38629 1.38629
47497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47498 17 2.53331 3.02441 0.20344 2.88069 17 - -
47499 1.38629 1.38629 1.38629 1.38629
47500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47501 18 0.23862 2.84929 2.43386 2.70756 18 - -
47502 1.38629 1.38629 1.38629 1.38629
47503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47504 19 2.81865 0.23582 2.88868 2.35662 19 - -
47505 1.38629 1.38629 1.38629 1.38629
47506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47507 20 2.53331 3.02441 0.20344 2.88069 20 - -
47508 1.38629 1.38629 1.38629 1.38629
47509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47510 21 2.81865 0.23582 2.88868 2.35662 21 - -
47511 1.38629 1.38629 1.38629 1.38629
47512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47513 22 2.53331 3.02441 0.20344 2.88069 22 - -
47514 1.38629 1.38629 1.38629 1.38629
47515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47516 23 0.23862 2.84929 2.43386 2.70756 23 - -
47517 1.38629 1.38629 1.38629 1.38629
47518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47519 24 2.57915 2.25909 2.64442 0.28946 24 - -
47520 1.38629 1.38629 1.38629 1.38629
47521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47522 25 2.81865 0.23582 2.88868 2.35662 25 - -
47523 1.38629 1.38629 1.38629 1.38629
47524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47525 26 0.23862 2.84929 2.43386 2.70756 26 - -
47526 1.38629 1.38629 1.38629 1.38629
47527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47528 27 2.81865 0.23582 2.88868 2.35662 27 - -
47529 1.38629 1.38629 1.38629 1.38629
47530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47531 28 2.81865 0.23582 2.88868 2.35662 28 - -
47532 1.38629 1.38629 1.38629 1.38629
47533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47534 29 2.81865 0.23582 2.88868 2.35662 29 - -
47535 1.38629 1.38629 1.38629 1.38629
47536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47537 30 2.53331 3.02441 0.20344 2.88069 30 - -
47538 1.38629 1.38629 1.38629 1.38629
47539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47540 31 2.81865 0.23582 2.88868 2.35662 31 - -
47541 1.38629 1.38629 1.38629 1.38629
47542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47543 32 2.57915 2.25909 2.64442 0.28946 32 - -
47544 1.38629 1.38629 1.38629 1.38629
47545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47546 33 2.53331 3.02441 0.20344 2.88069 33 - -
47547 1.38629 1.38629 1.38629 1.38629
47548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47549 34 0.23862 2.84929 2.43386 2.70756 34 - -
47550 1.38629 1.38629 1.38629 1.38629
47551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47552 35 0.23862 2.84929 2.43386 2.70756 35 - -
47553 1.38629 1.38629 1.38629 1.38629
47554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47555 36 2.81865 0.23582 2.88868 2.35662 36 - -
47556 1.38629 1.38629 1.38629 1.38629
47557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47558 37 2.57915 2.25909 2.64442 0.28946 37 - -
47559 1.38629 1.38629 1.38629 1.38629
47560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47561 38 2.57915 2.25909 2.64442 0.28946 38 - -
47562 1.38629 1.38629 1.38629 1.38629
47563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47564 39 0.23862 2.84929 2.43386 2.70756 39 - -
47565 1.38629 1.38629 1.38629 1.38629
47566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47567 40 0.23862 2.84929 2.43386 2.70756 40 - -
47568 1.38629 1.38629 1.38629 1.38629
47569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47570 41 2.53331 3.02441 0.20344 2.88069 41 - -
47571 1.38629 1.38629 1.38629 1.38629
47572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47573 42 2.81865 0.23582 2.88868 2.35662 42 - -
47574 1.38629 1.38629 1.38629 1.38629
47575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47576 43 0.23862 2.84929 2.43386 2.70756 43 - -
47577 1.38629 1.38629 1.38629 1.38629
47578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47579 44 2.57915 2.25909 2.64442 0.28946 44 - -
47580 1.38629 1.38629 1.38629 1.38629
47581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
47582 45 0.23862 2.84929 2.43386 2.70756 45 - -
47583 1.38629 1.38629 1.38629 1.38629
47584 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
47585 //
47586 HMMER3/b [3.0 | March 2010]
47587 NAME 4_LSU_Metazoa_4_LSU_start_sixg_long
47588 LENG 45
47589 ALPH DNA
47590 RF no
47591 CS no
47592 MAP yes
47593 DATE Mon Feb 27 22:55:16 2012
47594 NSEQ 7
47595 EFFN 3.407715
47596 CKSUM 1378068430
47597 STATS LOCAL MSV -7.5717 0.71933
47598 STATS LOCAL VITERBI -7.7982 0.71933
47599 STATS LOCAL FORWARD -4.1398 0.71933
47600 HMM A C G T
47601 m->m m->i m->d i->m i->i d->m d->d
47602 COMPO 1.27368 1.31689 1.57646 1.40435
47603 1.38629 1.38629 1.38629 1.38629
47604 0.03632 4.02673 4.02673 1.46634 0.26236 0.00000 *
47605 1 3.11579 2.61241 3.16290 0.17436 1 - -
47606 1.38629 1.38629 1.38629 1.38629
47607 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47608 2 3.11579 2.61241 3.16290 0.17436 2 - -
47609 1.38629 1.38629 1.38629 1.38629
47610 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47611 3 3.11579 2.61241 3.16290 0.17436 3 - -
47612 1.38629 1.38629 1.38629 1.38629
47613 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47614 4 3.11579 2.61241 3.16290 0.17436 4 - -
47615 1.38629 1.38629 1.38629 1.38629
47616 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47617 5 2.96616 3.61492 0.11423 3.52243 5 - -
47618 1.38629 1.38629 1.38629 1.38629
47619 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47620 6 0.13840 3.40710 2.81933 3.31132 6 - -
47621 1.38629 1.38629 1.38629 1.38629
47622 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47623 7 3.46401 0.12658 3.51215 2.85144 7 - -
47624 1.38629 1.38629 1.38629 1.38629
47625 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47626 8 3.46401 0.12658 3.51215 2.85144 8 - -
47627 1.38629 1.38629 1.38629 1.38629
47628 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47629 9 3.11579 2.61241 3.16290 0.17436 9 - -
47630 1.38629 1.38629 1.38629 1.38629
47631 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47632 10 2.96616 3.61492 0.11423 3.52243 10 - -
47633 1.38629 1.38629 1.38629 1.38629
47634 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47635 11 0.13840 3.40710 2.81933 3.31132 11 - -
47636 1.38629 1.38629 1.38629 1.38629
47637 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47638 12 0.13840 3.40710 2.81933 3.31132 12 - -
47639 1.38629 1.38629 1.38629 1.38629
47640 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47641 13 3.46401 0.12658 3.51215 2.85144 13 - -
47642 1.38629 1.38629 1.38629 1.38629
47643 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47644 14 3.11579 2.61241 3.16290 0.17436 14 - -
47645 1.38629 1.38629 1.38629 1.38629
47646 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47647 15 3.46401 0.12658 3.51215 2.85144 15 - -
47648 1.38629 1.38629 1.38629 1.38629
47649 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47650 16 0.13840 3.40710 2.81933 3.31132 16 - -
47651 1.38629 1.38629 1.38629 1.38629
47652 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47653 17 2.96616 3.61492 0.11423 3.52243 17 - -
47654 1.38629 1.38629 1.38629 1.38629
47655 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47656 18 3.11579 2.61241 3.16290 0.17436 18 - -
47657 1.38629 1.38629 1.38629 1.38629
47658 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47659 19 3.46401 0.12658 3.51215 2.85144 19 - -
47660 1.38629 1.38629 1.38629 1.38629
47661 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47662 20 2.96616 3.61492 0.11423 3.52243 20 - -
47663 1.38629 1.38629 1.38629 1.38629
47664 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47665 21 0.13840 3.40710 2.81933 3.31132 21 - -
47666 1.38629 1.38629 1.38629 1.38629
47667 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47668 22 2.96616 3.61492 0.11423 3.52243 22 - -
47669 1.38629 1.38629 1.38629 1.38629
47670 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47671 23 0.13840 3.40710 2.81933 3.31132 23 - -
47672 1.38629 1.38629 1.38629 1.38629
47673 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47674 24 2.10784 2.18574 0.86149 1.06835 24 - -
47675 1.38629 1.38629 1.38629 1.38629
47676 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47677 25 3.46401 0.12658 3.51215 2.85144 25 - -
47678 1.38629 1.38629 1.38629 1.38629
47679 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47680 26 0.13840 3.40710 2.81933 3.31132 26 - -
47681 1.38629 1.38629 1.38629 1.38629
47682 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47683 27 3.46401 0.12658 3.51215 2.85144 27 - -
47684 1.38629 1.38629 1.38629 1.38629
47685 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47686 28 3.46401 0.12658 3.51215 2.85144 28 - -
47687 1.38629 1.38629 1.38629 1.38629
47688 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47689 29 3.46401 0.12658 3.51215 2.85144 29 - -
47690 1.38629 1.38629 1.38629 1.38629
47691 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47692 30 2.96616 3.61492 0.11423 3.52243 30 - -
47693 1.38629 1.38629 1.38629 1.38629
47694 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47695 31 3.46401 0.12658 3.51215 2.85144 31 - -
47696 1.38629 1.38629 1.38629 1.38629
47697 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47698 32 3.11579 2.61241 3.16290 0.17436 32 - -
47699 1.38629 1.38629 1.38629 1.38629
47700 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47701 33 2.96616 3.61492 0.11423 3.52243 33 - -
47702 1.38629 1.38629 1.38629 1.38629
47703 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47704 34 0.13840 3.40710 2.81933 3.31132 34 - -
47705 1.38629 1.38629 1.38629 1.38629
47706 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47707 35 0.13840 3.40710 2.81933 3.31132 35 - -
47708 1.38629 1.38629 1.38629 1.38629
47709 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47710 36 3.46401 0.12658 3.51215 2.85144 36 - -
47711 1.38629 1.38629 1.38629 1.38629
47712 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47713 37 3.11579 2.61241 3.16290 0.17436 37 - -
47714 1.38629 1.38629 1.38629 1.38629
47715 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47716 38 3.11579 2.61241 3.16290 0.17436 38 - -
47717 1.38629 1.38629 1.38629 1.38629
47718 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47719 39 0.13840 3.40710 2.81933 3.31132 39 - -
47720 1.38629 1.38629 1.38629 1.38629
47721 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47722 40 0.13840 3.40710 2.81933 3.31132 40 - -
47723 1.38629 1.38629 1.38629 1.38629
47724 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47725 41 2.96616 3.61492 0.11423 3.52243 41 - -
47726 1.38629 1.38629 1.38629 1.38629
47727 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47728 42 3.46401 0.12658 3.51215 2.85144 42 - -
47729 1.38629 1.38629 1.38629 1.38629
47730 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47731 43 0.13840 3.40710 2.81933 3.31132 43 - -
47732 1.38629 1.38629 1.38629 1.38629
47733 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47734 44 3.11579 2.61241 3.16290 0.17436 44 - -
47735 1.38629 1.38629 1.38629 1.38629
47736 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547
47737 45 0.13840 3.40710 2.81933 3.31132 45 - -
47738 1.38629 1.38629 1.38629 1.38629
47739 0.01832 4.00874 * 1.46634 0.26236 0.00000 *
47740 //
47741 HMMER3/b [3.0 | March 2010]
47742 NAME 4_LSU_Metazoa_4_LSU_start_sixteen_long
47743 LENG 45
47744 ALPH DNA
47745 RF no
47746 CS no
47747 MAP yes
47748 DATE Mon Feb 27 22:58:50 2012
47749 NSEQ 3
47750 EFFN 3.000000
47751 CKSUM 2702931191
47752 STATS LOCAL MSV -8.1252 0.72211
47753 STATS LOCAL VITERBI -7.8013 0.72211
47754 STATS LOCAL FORWARD -4.0275 0.72211
47755 HMM A C G T
47756 m->m m->i m->d i->m i->i d->m d->d
47757 COMPO 1.27401 1.27647 1.47321 1.55077
47758 1.38629 1.38629 1.38629 1.38629
47759 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
47760 1 0.15719 3.27118 2.73043 3.16274 1 - -
47761 1.38629 1.38629 1.38629 1.38629
47762 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47763 2 2.97980 2.52563 3.03204 0.19727 2 - -
47764 1.38629 1.38629 1.38629 1.38629
47765 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47766 3 3.30705 0.14631 3.36166 2.73626 3 - -
47767 1.38629 1.38629 1.38629 1.38629
47768 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47769 4 3.30705 0.14631 3.36166 2.73626 4 - -
47770 1.38629 1.38629 1.38629 1.38629
47771 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47772 5 2.86982 3.47591 0.13017 3.36931 5 - -
47773 1.38629 1.38629 1.38629 1.38629
47774 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47775 6 0.15719 3.27118 2.73043 3.16274 6 - -
47776 1.38629 1.38629 1.38629 1.38629
47777 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47778 7 3.30705 0.14631 3.36166 2.73626 7 - -
47779 1.38629 1.38629 1.38629 1.38629
47780 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47781 8 3.30705 0.14631 3.36166 2.73626 8 - -
47782 1.38629 1.38629 1.38629 1.38629
47783 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47784 9 2.97980 2.52563 3.03204 0.19727 9 - -
47785 1.38629 1.38629 1.38629 1.38629
47786 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47787 10 3.30705 0.14631 3.36166 2.73626 10 - -
47788 1.38629 1.38629 1.38629 1.38629
47789 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47790 11 0.56013 2.54906 1.34493 2.40626 11 - -
47791 1.38629 1.38629 1.38629 1.38629
47792 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47793 12 2.86982 3.47591 0.13017 3.36931 12 - -
47794 1.38629 1.38629 1.38629 1.38629
47795 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47796 13 0.15719 3.27118 2.73043 3.16274 13 - -
47797 1.38629 1.38629 1.38629 1.38629
47798 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47799 14 2.97980 2.52563 3.03204 0.19727 14 - -
47800 1.38629 1.38629 1.38629 1.38629
47801 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47802 15 3.30705 0.14631 3.36166 2.73626 15 - -
47803 1.38629 1.38629 1.38629 1.38629
47804 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47805 16 0.15719 3.27118 2.73043 3.16274 16 - -
47806 1.38629 1.38629 1.38629 1.38629
47807 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47808 17 2.86982 3.47591 0.13017 3.36931 17 - -
47809 1.38629 1.38629 1.38629 1.38629
47810 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47811 18 1.31182 2.57335 0.56876 2.42854 18 - -
47812 1.38629 1.38629 1.38629 1.38629
47813 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47814 19 3.30705 0.14631 3.36166 2.73626 19 - -
47815 1.38629 1.38629 1.38629 1.38629
47816 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47817 20 2.86982 3.47591 0.13017 3.36931 20 - -
47818 1.38629 1.38629 1.38629 1.38629
47819 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47820 21 2.86982 3.47591 0.13017 3.36931 21 - -
47821 1.38629 1.38629 1.38629 1.38629
47822 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47823 22 2.86982 3.47591 0.13017 3.36931 22 - -
47824 1.38629 1.38629 1.38629 1.38629
47825 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47826 23 0.15719 3.27118 2.73043 3.16274 23 - -
47827 1.38629 1.38629 1.38629 1.38629
47828 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47829 24 3.30705 0.14631 3.36166 2.73626 24 - -
47830 1.38629 1.38629 1.38629 1.38629
47831 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47832 25 2.97980 2.52563 3.03204 0.19727 25 - -
47833 1.38629 1.38629 1.38629 1.38629
47834 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47835 26 0.15719 3.27118 2.73043 3.16274 26 - -
47836 1.38629 1.38629 1.38629 1.38629
47837 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47838 27 3.30705 0.14631 3.36166 2.73626 27 - -
47839 1.38629 1.38629 1.38629 1.38629
47840 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47841 28 2.08990 1.41165 0.68330 2.05875 28 - -
47842 1.38629 1.38629 1.38629 1.38629
47843 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47844 29 3.30705 0.14631 3.36166 2.73626 29 - -
47845 1.38629 1.38629 1.38629 1.38629
47846 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47847 30 2.09644 0.73721 1.35192 1.96671 30 - -
47848 1.38629 1.38629 1.38629 1.38629
47849 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47850 31 3.30705 0.14631 3.36166 2.73626 31 - -
47851 1.38629 1.38629 1.38629 1.38629
47852 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47853 32 2.97980 2.52563 3.03204 0.19727 32 - -
47854 1.38629 1.38629 1.38629 1.38629
47855 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47856 33 2.86982 3.47591 0.13017 3.36931 33 - -
47857 1.38629 1.38629 1.38629 1.38629
47858 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47859 34 0.15719 3.27118 2.73043 3.16274 34 - -
47860 1.38629 1.38629 1.38629 1.38629
47861 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47862 35 0.15719 3.27118 2.73043 3.16274 35 - -
47863 1.38629 1.38629 1.38629 1.38629
47864 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47865 36 2.97980 2.52563 3.03204 0.19727 36 - -
47866 1.38629 1.38629 1.38629 1.38629
47867 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47868 37 2.97980 2.52563 3.03204 0.19727 37 - -
47869 1.38629 1.38629 1.38629 1.38629
47870 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47871 38 2.97980 2.52563 3.03204 0.19727 38 - -
47872 1.38629 1.38629 1.38629 1.38629
47873 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47874 39 0.15719 3.27118 2.73043 3.16274 39 - -
47875 1.38629 1.38629 1.38629 1.38629
47876 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47877 40 0.15719 3.27118 2.73043 3.16274 40 - -
47878 1.38629 1.38629 1.38629 1.38629
47879 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47880 41 2.86982 3.47591 0.13017 3.36931 41 - -
47881 1.38629 1.38629 1.38629 1.38629
47882 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47883 42 3.30705 0.14631 3.36166 2.73626 42 - -
47884 1.38629 1.38629 1.38629 1.38629
47885 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47886 43 0.15719 3.27118 2.73043 3.16274 43 - -
47887 1.38629 1.38629 1.38629 1.38629
47888 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47889 44 2.97980 2.52563 3.03204 0.19727 44 - -
47890 1.38629 1.38629 1.38629 1.38629
47891 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
47892 45 0.15719 3.27118 2.73043 3.16274 45 - -
47893 1.38629 1.38629 1.38629 1.38629
47894 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
47895 //
47896 HMMER3/b [3.0 | March 2010]
47897 NAME 4_LSU_Metazoa_4_LSU_start_ten_long
47898 LENG 45
47899 ALPH DNA
47900 RF no
47901 CS no
47902 MAP yes
47903 DATE Mon Feb 27 22:57:08 2012
47904 NSEQ 20
47905 EFFN 3.813477
47906 CKSUM 482766231
47907 STATS LOCAL MSV -7.0524 0.71931
47908 STATS LOCAL VITERBI -7.7040 0.71931
47909 STATS LOCAL FORWARD -4.3542 0.71931
47910 HMM A C G T
47911 m->m m->i m->d i->m i->i d->m d->d
47912 COMPO 1.29024 1.29052 1.51005 1.47504
47913 1.38629 1.38629 1.38629 1.38629
47914 0.03382 4.09659 4.09659 1.46634 0.26236 0.00000 *
47915 1 0.86422 2.22193 2.22033 1.01708 1 - -
47916 1.38629 1.38629 1.38629 1.38629
47917 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47918 2 3.23747 2.68958 3.27984 0.15643 2 - -
47919 1.38629 1.38629 1.38629 1.38629
47920 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47921 3 3.04620 3.73275 0.10245 3.65294 3 - -
47922 1.38629 1.38629 1.38629 1.38629
47923 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47924 4 3.59927 0.11202 3.64140 2.94850 4 - -
47925 1.38629 1.38629 1.38629 1.38629
47926 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47927 5 0.12415 3.52528 2.89544 3.44100 5 - -
47928 1.38629 1.38629 1.38629 1.38629
47929 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47930 6 0.12415 3.52528 2.89544 3.44100 6 - -
47931 1.38629 1.38629 1.38629 1.38629
47932 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47933 7 3.59927 0.11202 3.64140 2.94850 7 - -
47934 1.38629 1.38629 1.38629 1.38629
47935 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47936 8 3.59927 0.11202 3.64140 2.94850 8 - -
47937 1.38629 1.38629 1.38629 1.38629
47938 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47939 9 3.23747 2.68958 3.27984 0.15643 9 - -
47940 1.38629 1.38629 1.38629 1.38629
47941 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47942 10 3.04620 3.73275 0.10245 3.65294 10 - -
47943 1.38629 1.38629 1.38629 1.38629
47944 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47945 11 0.12415 3.52528 2.89544 3.44100 11 - -
47946 1.38629 1.38629 1.38629 1.38629
47947 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47948 12 1.69592 2.94764 0.35053 2.81692 12 - -
47949 1.38629 1.38629 1.38629 1.38629
47950 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47951 13 3.59927 0.11202 3.64140 2.94850 13 - -
47952 1.38629 1.38629 1.38629 1.38629
47953 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47954 14 3.23747 2.68958 3.27984 0.15643 14 - -
47955 1.38629 1.38629 1.38629 1.38629
47956 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47957 15 3.59927 0.11202 3.64140 2.94850 15 - -
47958 1.38629 1.38629 1.38629 1.38629
47959 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47960 16 0.12415 3.52528 2.89544 3.44100 16 - -
47961 1.38629 1.38629 1.38629 1.38629
47962 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47963 17 3.04620 3.73275 0.10245 3.65294 17 - -
47964 1.38629 1.38629 1.38629 1.38629
47965 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47966 18 2.15720 2.22527 0.88333 1.01360 18 - -
47967 1.38629 1.38629 1.38629 1.38629
47968 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47969 19 3.59927 0.11202 3.64140 2.94850 19 - -
47970 1.38629 1.38629 1.38629 1.38629
47971 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47972 20 3.04620 3.73275 0.10245 3.65294 20 - -
47973 1.38629 1.38629 1.38629 1.38629
47974 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47975 21 3.23747 2.68958 3.27984 0.15643 21 - -
47976 1.38629 1.38629 1.38629 1.38629
47977 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47978 22 3.04620 3.73275 0.10245 3.65294 22 - -
47979 1.38629 1.38629 1.38629 1.38629
47980 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47981 23 0.12415 3.52528 2.89544 3.44100 23 - -
47982 1.38629 1.38629 1.38629 1.38629
47983 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47984 24 2.88047 1.89372 2.93767 0.30057 24 - -
47985 1.38629 1.38629 1.38629 1.38629
47986 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47987 25 3.23747 2.68958 3.27984 0.15643 25 - -
47988 1.38629 1.38629 1.38629 1.38629
47989 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47990 26 0.12415 3.52528 2.89544 3.44100 26 - -
47991 1.38629 1.38629 1.38629 1.38629
47992 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47993 27 3.59927 0.11202 3.64140 2.94850 27 - -
47994 1.38629 1.38629 1.38629 1.38629
47995 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47996 28 3.59927 0.11202 3.64140 2.94850 28 - -
47997 1.38629 1.38629 1.38629 1.38629
47998 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
47999 29 3.59927 0.11202 3.64140 2.94850 29 - -
48000 1.38629 1.38629 1.38629 1.38629
48001 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48002 30 3.04620 3.73275 0.10245 3.65294 30 - -
48003 1.38629 1.38629 1.38629 1.38629
48004 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48005 31 3.59927 0.11202 3.64140 2.94850 31 - -
48006 1.38629 1.38629 1.38629 1.38629
48007 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48008 32 2.64594 1.44143 2.71139 0.46836 32 - -
48009 1.38629 1.38629 1.38629 1.38629
48010 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48011 33 3.04620 3.73275 0.10245 3.65294 33 - -
48012 1.38629 1.38629 1.38629 1.38629
48013 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48014 34 0.12415 3.52528 2.89544 3.44100 34 - -
48015 1.38629 1.38629 1.38629 1.38629
48016 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48017 35 0.12415 3.52528 2.89544 3.44100 35 - -
48018 1.38629 1.38629 1.38629 1.38629
48019 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48020 36 3.59927 0.11202 3.64140 2.94850 36 - -
48021 1.38629 1.38629 1.38629 1.38629
48022 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48023 37 3.23747 2.68958 3.27984 0.15643 37 - -
48024 1.38629 1.38629 1.38629 1.38629
48025 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48026 38 3.23747 2.68958 3.27984 0.15643 38 - -
48027 1.38629 1.38629 1.38629 1.38629
48028 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48029 39 0.12415 3.52528 2.89544 3.44100 39 - -
48030 1.38629 1.38629 1.38629 1.38629
48031 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48032 40 0.12415 3.52528 2.89544 3.44100 40 - -
48033 1.38629 1.38629 1.38629 1.38629
48034 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48035 41 3.04620 3.73275 0.10245 3.65294 41 - -
48036 1.38629 1.38629 1.38629 1.38629
48037 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48038 42 3.59927 0.11202 3.64140 2.94850 42 - -
48039 1.38629 1.38629 1.38629 1.38629
48040 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48041 43 0.12415 3.52528 2.89544 3.44100 43 - -
48042 1.38629 1.38629 1.38629 1.38629
48043 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48044 44 3.23747 2.68958 3.27984 0.15643 44 - -
48045 1.38629 1.38629 1.38629 1.38629
48046 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547
48047 45 0.12415 3.52528 2.89544 3.44100 45 - -
48048 1.38629 1.38629 1.38629 1.38629
48049 0.01706 4.07982 * 1.46634 0.26236 0.00000 *
48050 //
48051 HMMER3/b [3.0 | March 2010]
48052 NAME 4_LSU_Metazoa_4_LSU_start_thirteena_long
48053 LENG 45
48054 ALPH DNA
48055 RF no
48056 CS no
48057 MAP yes
48058 DATE Mon Feb 27 22:57:46 2012
48059 NSEQ 2
48060 EFFN 2.000000
48061 CKSUM 99869061
48062 STATS LOCAL MSV -7.4759 0.72777
48063 STATS LOCAL VITERBI -8.1308 0.72777
48064 STATS LOCAL FORWARD -3.5939 0.72777
48065 HMM A C G T
48066 m->m m->i m->d i->m i->i d->m d->d
48067 COMPO 1.29537 1.19288 1.50367 1.60672
48068 1.38629 1.38629 1.38629 1.38629
48069 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
48070 1 2.81865 0.23582 2.88868 2.35662 1 - -
48071 1.38629 1.38629 1.38629 1.38629
48072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48073 2 2.57915 2.25909 2.64442 0.28946 2 - -
48074 1.38629 1.38629 1.38629 1.38629
48075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48076 3 2.81865 0.23582 2.88868 2.35662 3 - -
48077 1.38629 1.38629 1.38629 1.38629
48078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48079 4 2.81865 0.23582 2.88868 2.35662 4 - -
48080 1.38629 1.38629 1.38629 1.38629
48081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48082 5 2.53331 3.02441 0.20344 2.88069 5 - -
48083 1.38629 1.38629 1.38629 1.38629
48084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48085 6 0.23862 2.84929 2.43386 2.70756 6 - -
48086 1.38629 1.38629 1.38629 1.38629
48087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48088 7 2.81865 0.23582 2.88868 2.35662 7 - -
48089 1.38629 1.38629 1.38629 1.38629
48090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48091 8 2.81865 0.23582 2.88868 2.35662 8 - -
48092 1.38629 1.38629 1.38629 1.38629
48093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48094 9 2.57915 2.25909 2.64442 0.28946 9 - -
48095 1.38629 1.38629 1.38629 1.38629
48096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48097 10 2.81865 0.23582 2.88868 2.35662 10 - -
48098 1.38629 1.38629 1.38629 1.38629
48099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48100 11 0.23862 2.84929 2.43386 2.70756 11 - -
48101 1.38629 1.38629 1.38629 1.38629
48102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48103 12 2.53331 3.02441 0.20344 2.88069 12 - -
48104 1.38629 1.38629 1.38629 1.38629
48105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48106 13 0.23862 2.84929 2.43386 2.70756 13 - -
48107 1.38629 1.38629 1.38629 1.38629
48108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48109 14 2.57915 2.25909 2.64442 0.28946 14 - -
48110 1.38629 1.38629 1.38629 1.38629
48111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48112 15 2.81865 0.23582 2.88868 2.35662 15 - -
48113 1.38629 1.38629 1.38629 1.38629
48114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48115 16 0.23862 2.84929 2.43386 2.70756 16 - -
48116 1.38629 1.38629 1.38629 1.38629
48117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48118 17 2.53331 3.02441 0.20344 2.88069 17 - -
48119 1.38629 1.38629 1.38629 1.38629
48120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48121 18 2.53331 3.02441 0.20344 2.88069 18 - -
48122 1.38629 1.38629 1.38629 1.38629
48123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48124 19 2.81865 0.23582 2.88868 2.35662 19 - -
48125 1.38629 1.38629 1.38629 1.38629
48126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48127 20 2.53331 3.02441 0.20344 2.88069 20 - -
48128 1.38629 1.38629 1.38629 1.38629
48129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48130 21 0.23862 2.84929 2.43386 2.70756 21 - -
48131 1.38629 1.38629 1.38629 1.38629
48132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48133 22 2.53331 3.02441 0.20344 2.88069 22 - -
48134 1.38629 1.38629 1.38629 1.38629
48135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48136 23 0.23862 2.84929 2.43386 2.70756 23 - -
48137 1.38629 1.38629 1.38629 1.38629
48138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48139 24 2.81865 0.23582 2.88868 2.35662 24 - -
48140 1.38629 1.38629 1.38629 1.38629
48141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48142 25 2.57915 2.25909 2.64442 0.28946 25 - -
48143 1.38629 1.38629 1.38629 1.38629
48144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48145 26 0.23862 2.84929 2.43386 2.70756 26 - -
48146 1.38629 1.38629 1.38629 1.38629
48147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48148 27 2.81865 0.23582 2.88868 2.35662 27 - -
48149 1.38629 1.38629 1.38629 1.38629
48150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48151 28 2.53331 3.02441 0.20344 2.88069 28 - -
48152 1.38629 1.38629 1.38629 1.38629
48153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48154 29 2.81865 0.23582 2.88868 2.35662 29 - -
48155 1.38629 1.38629 1.38629 1.38629
48156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48157 30 2.81865 0.23582 2.88868 2.35662 30 - -
48158 1.38629 1.38629 1.38629 1.38629
48159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48160 31 2.81865 0.23582 2.88868 2.35662 31 - -
48161 1.38629 1.38629 1.38629 1.38629
48162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48163 32 2.57915 2.25909 2.64442 0.28946 32 - -
48164 1.38629 1.38629 1.38629 1.38629
48165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48166 33 2.53331 3.02441 0.20344 2.88069 33 - -
48167 1.38629 1.38629 1.38629 1.38629
48168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48169 34 0.23862 2.84929 2.43386 2.70756 34 - -
48170 1.38629 1.38629 1.38629 1.38629
48171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48172 35 0.23862 2.84929 2.43386 2.70756 35 - -
48173 1.38629 1.38629 1.38629 1.38629
48174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48175 36 2.81865 0.23582 2.88868 2.35662 36 - -
48176 1.38629 1.38629 1.38629 1.38629
48177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48178 37 2.57915 2.25909 2.64442 0.28946 37 - -
48179 1.38629 1.38629 1.38629 1.38629
48180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48181 38 2.57915 2.25909 2.64442 0.28946 38 - -
48182 1.38629 1.38629 1.38629 1.38629
48183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48184 39 0.23862 2.84929 2.43386 2.70756 39 - -
48185 1.38629 1.38629 1.38629 1.38629
48186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48187 40 0.23862 2.84929 2.43386 2.70756 40 - -
48188 1.38629 1.38629 1.38629 1.38629
48189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48190 41 2.53331 3.02441 0.20344 2.88069 41 - -
48191 1.38629 1.38629 1.38629 1.38629
48192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48193 42 2.81865 0.23582 2.88868 2.35662 42 - -
48194 1.38629 1.38629 1.38629 1.38629
48195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48196 43 0.23862 2.84929 2.43386 2.70756 43 - -
48197 1.38629 1.38629 1.38629 1.38629
48198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48199 44 2.57915 2.25909 2.64442 0.28946 44 - -
48200 1.38629 1.38629 1.38629 1.38629
48201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48202 45 0.23862 2.84929 2.43386 2.70756 45 - -
48203 1.38629 1.38629 1.38629 1.38629
48204 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
48205 //
48206 HMMER3/b [3.0 | March 2010]
48207 NAME 4_LSU_Metazoa_4_LSU_start_thirteenb_long
48208 LENG 45
48209 ALPH DNA
48210 RF no
48211 CS no
48212 MAP yes
48213 DATE Mon Feb 27 22:57:54 2012
48214 NSEQ 2
48215 EFFN 2.000000
48216 CKSUM 3873050328
48217 STATS LOCAL MSV -7.5297 0.72801
48218 STATS LOCAL VITERBI -8.2100 0.72801
48219 STATS LOCAL FORWARD -3.3773 0.72801
48220 HMM A C G T
48221 m->m m->i m->d i->m i->i d->m d->d
48222 COMPO 1.29291 1.29179 1.49882 1.48124
48223 1.38629 1.38629 1.38629 1.38629
48224 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
48225 1 2.57915 2.25909 2.64442 0.28946 1 - -
48226 1.38629 1.38629 1.38629 1.38629
48227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48228 2 2.53331 3.02441 0.20344 2.88069 2 - -
48229 1.38629 1.38629 1.38629 1.38629
48230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48231 3 2.57915 2.25909 2.64442 0.28946 3 - -
48232 1.38629 1.38629 1.38629 1.38629
48233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48234 4 2.57915 2.25909 2.64442 0.28946 4 - -
48235 1.38629 1.38629 1.38629 1.38629
48236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48237 5 2.53331 3.02441 0.20344 2.88069 5 - -
48238 1.38629 1.38629 1.38629 1.38629
48239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48240 6 0.23862 2.84929 2.43386 2.70756 6 - -
48241 1.38629 1.38629 1.38629 1.38629
48242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48243 7 2.81865 0.23582 2.88868 2.35662 7 - -
48244 1.38629 1.38629 1.38629 1.38629
48245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48246 8 2.81865 0.23582 2.88868 2.35662 8 - -
48247 1.38629 1.38629 1.38629 1.38629
48248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48249 9 2.57915 2.25909 2.64442 0.28946 9 - -
48250 1.38629 1.38629 1.38629 1.38629
48251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48252 10 2.81865 0.23582 2.88868 2.35662 10 - -
48253 1.38629 1.38629 1.38629 1.38629
48254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48255 11 0.23862 2.84929 2.43386 2.70756 11 - -
48256 1.38629 1.38629 1.38629 1.38629
48257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48258 12 2.53331 3.02441 0.20344 2.88069 12 - -
48259 1.38629 1.38629 1.38629 1.38629
48260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48261 13 0.23862 2.84929 2.43386 2.70756 13 - -
48262 1.38629 1.38629 1.38629 1.38629
48263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48264 14 2.57915 2.25909 2.64442 0.28946 14 - -
48265 1.38629 1.38629 1.38629 1.38629
48266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48267 15 2.81865 0.23582 2.88868 2.35662 15 - -
48268 1.38629 1.38629 1.38629 1.38629
48269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48270 16 0.23862 2.84929 2.43386 2.70756 16 - -
48271 1.38629 1.38629 1.38629 1.38629
48272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48273 17 2.53331 3.02441 0.20344 2.88069 17 - -
48274 1.38629 1.38629 1.38629 1.38629
48275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48276 18 0.23862 2.84929 2.43386 2.70756 18 - -
48277 1.38629 1.38629 1.38629 1.38629
48278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48279 19 2.81865 0.23582 2.88868 2.35662 19 - -
48280 1.38629 1.38629 1.38629 1.38629
48281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48282 20 2.53331 3.02441 0.20344 2.88069 20 - -
48283 1.38629 1.38629 1.38629 1.38629
48284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48285 21 0.23862 2.84929 2.43386 2.70756 21 - -
48286 1.38629 1.38629 1.38629 1.38629
48287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48288 22 2.53331 3.02441 0.20344 2.88069 22 - -
48289 1.38629 1.38629 1.38629 1.38629
48290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48291 23 2.53331 3.02441 0.20344 2.88069 23 - -
48292 1.38629 1.38629 1.38629 1.38629
48293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48294 24 2.81865 0.23582 2.88868 2.35662 24 - -
48295 1.38629 1.38629 1.38629 1.38629
48296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48297 25 2.57915 2.25909 2.64442 0.28946 25 - -
48298 1.38629 1.38629 1.38629 1.38629
48299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48300 26 0.23862 2.84929 2.43386 2.70756 26 - -
48301 1.38629 1.38629 1.38629 1.38629
48302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48303 27 2.81865 0.23582 2.88868 2.35662 27 - -
48304 1.38629 1.38629 1.38629 1.38629
48305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48306 28 2.81865 0.23582 2.88868 2.35662 28 - -
48307 1.38629 1.38629 1.38629 1.38629
48308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48309 29 2.81865 0.23582 2.88868 2.35662 29 - -
48310 1.38629 1.38629 1.38629 1.38629
48311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48312 30 2.53331 3.02441 0.20344 2.88069 30 - -
48313 1.38629 1.38629 1.38629 1.38629
48314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48315 31 2.81865 0.23582 2.88868 2.35662 31 - -
48316 1.38629 1.38629 1.38629 1.38629
48317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48318 32 2.81865 0.23582 2.88868 2.35662 32 - -
48319 1.38629 1.38629 1.38629 1.38629
48320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48321 33 2.57915 2.25909 2.64442 0.28946 33 - -
48322 1.38629 1.38629 1.38629 1.38629
48323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48324 34 0.23862 2.84929 2.43386 2.70756 34 - -
48325 1.38629 1.38629 1.38629 1.38629
48326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48327 35 0.23862 2.84929 2.43386 2.70756 35 - -
48328 1.38629 1.38629 1.38629 1.38629
48329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48330 36 2.81865 0.23582 2.88868 2.35662 36 - -
48331 1.38629 1.38629 1.38629 1.38629
48332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48333 37 2.57915 2.25909 2.64442 0.28946 37 - -
48334 1.38629 1.38629 1.38629 1.38629
48335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48336 38 2.57915 2.25909 2.64442 0.28946 38 - -
48337 1.38629 1.38629 1.38629 1.38629
48338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48339 39 0.23862 2.84929 2.43386 2.70756 39 - -
48340 1.38629 1.38629 1.38629 1.38629
48341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48342 40 0.23862 2.84929 2.43386 2.70756 40 - -
48343 1.38629 1.38629 1.38629 1.38629
48344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48345 41 2.53331 3.02441 0.20344 2.88069 41 - -
48346 1.38629 1.38629 1.38629 1.38629
48347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48348 42 2.81865 0.23582 2.88868 2.35662 42 - -
48349 1.38629 1.38629 1.38629 1.38629
48350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48351 43 0.23862 2.84929 2.43386 2.70756 43 - -
48352 1.38629 1.38629 1.38629 1.38629
48353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48354 44 2.57915 2.25909 2.64442 0.28946 44 - -
48355 1.38629 1.38629 1.38629 1.38629
48356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
48357 45 0.23862 2.84929 2.43386 2.70756 45 - -
48358 1.38629 1.38629 1.38629 1.38629
48359 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
48360 //
48361 HMMER3/b [3.0 | March 2010]
48362 NAME 4_LSU_Metazoa_4_LSU_start_thirteenc_long
48363 LENG 45
48364 ALPH DNA
48365 RF no
48366 CS no
48367 MAP yes
48368 DATE Mon Feb 27 22:58:02 2012
48369 NSEQ 3
48370 EFFN 3.000000
48371 CKSUM 2768605859
48372 STATS LOCAL MSV -8.0306 0.72026
48373 STATS LOCAL VITERBI -7.8201 0.72026
48374 STATS LOCAL FORWARD -4.1363 0.72026
48375 HMM A C G T
48376 m->m m->i m->d i->m i->i d->m d->d
48377 COMPO 1.28277 1.26352 1.52493 1.50310
48378 1.38629 1.38629 1.38629 1.38629
48379 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
48380 1 3.30705 0.14631 3.36166 2.73626 1 - -
48381 1.38629 1.38629 1.38629 1.38629
48382 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48383 2 3.30705 0.14631 3.36166 2.73626 2 - -
48384 1.38629 1.38629 1.38629 1.38629
48385 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48386 3 3.30705 0.14631 3.36166 2.73626 3 - -
48387 1.38629 1.38629 1.38629 1.38629
48388 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48389 4 2.97980 2.52563 3.03204 0.19727 4 - -
48390 1.38629 1.38629 1.38629 1.38629
48391 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48392 5 2.86982 3.47591 0.13017 3.36931 5 - -
48393 1.38629 1.38629 1.38629 1.38629
48394 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48395 6 0.15719 3.27118 2.73043 3.16274 6 - -
48396 1.38629 1.38629 1.38629 1.38629
48397 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48398 7 3.30705 0.14631 3.36166 2.73626 7 - -
48399 1.38629 1.38629 1.38629 1.38629
48400 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48401 8 3.30705 0.14631 3.36166 2.73626 8 - -
48402 1.38629 1.38629 1.38629 1.38629
48403 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48404 9 2.97980 2.52563 3.03204 0.19727 9 - -
48405 1.38629 1.38629 1.38629 1.38629
48406 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48407 10 3.30705 0.14631 3.36166 2.73626 10 - -
48408 1.38629 1.38629 1.38629 1.38629
48409 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48410 11 2.86982 3.47591 0.13017 3.36931 11 - -
48411 1.38629 1.38629 1.38629 1.38629
48412 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48413 12 2.86982 3.47591 0.13017 3.36931 12 - -
48414 1.38629 1.38629 1.38629 1.38629
48415 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48416 13 0.15719 3.27118 2.73043 3.16274 13 - -
48417 1.38629 1.38629 1.38629 1.38629
48418 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48419 14 2.97980 2.52563 3.03204 0.19727 14 - -
48420 1.38629 1.38629 1.38629 1.38629
48421 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48422 15 3.30705 0.14631 3.36166 2.73626 15 - -
48423 1.38629 1.38629 1.38629 1.38629
48424 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48425 16 0.15719 3.27118 2.73043 3.16274 16 - -
48426 1.38629 1.38629 1.38629 1.38629
48427 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48428 17 2.86982 3.47591 0.13017 3.36931 17 - -
48429 1.38629 1.38629 1.38629 1.38629
48430 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48431 18 0.15719 3.27118 2.73043 3.16274 18 - -
48432 1.38629 1.38629 1.38629 1.38629
48433 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48434 19 2.97980 2.52563 3.03204 0.19727 19 - -
48435 1.38629 1.38629 1.38629 1.38629
48436 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48437 20 2.86982 3.47591 0.13017 3.36931 20 - -
48438 1.38629 1.38629 1.38629 1.38629
48439 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48440 21 2.97980 2.52563 3.03204 0.19727 21 - -
48441 1.38629 1.38629 1.38629 1.38629
48442 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48443 22 2.86982 3.47591 0.13017 3.36931 22 - -
48444 1.38629 1.38629 1.38629 1.38629
48445 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48446 23 0.15719 3.27118 2.73043 3.16274 23 - -
48447 1.38629 1.38629 1.38629 1.38629
48448 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48449 24 0.15719 3.27118 2.73043 3.16274 24 - -
48450 1.38629 1.38629 1.38629 1.38629
48451 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48452 25 2.97980 2.52563 3.03204 0.19727 25 - -
48453 1.38629 1.38629 1.38629 1.38629
48454 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48455 26 0.15719 3.27118 2.73043 3.16274 26 - -
48456 1.38629 1.38629 1.38629 1.38629
48457 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48458 27 3.30705 0.14631 3.36166 2.73626 27 - -
48459 1.38629 1.38629 1.38629 1.38629
48460 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48461 28 3.30705 0.14631 3.36166 2.73626 28 - -
48462 1.38629 1.38629 1.38629 1.38629
48463 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48464 29 3.30705 0.14631 3.36166 2.73626 29 - -
48465 1.38629 1.38629 1.38629 1.38629
48466 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48467 30 2.86982 3.47591 0.13017 3.36931 30 - -
48468 1.38629 1.38629 1.38629 1.38629
48469 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48470 31 3.30705 0.14631 3.36166 2.73626 31 - -
48471 1.38629 1.38629 1.38629 1.38629
48472 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48473 32 2.97980 2.52563 3.03204 0.19727 32 - -
48474 1.38629 1.38629 1.38629 1.38629
48475 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48476 33 2.86982 3.47591 0.13017 3.36931 33 - -
48477 1.38629 1.38629 1.38629 1.38629
48478 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48479 34 0.15719 3.27118 2.73043 3.16274 34 - -
48480 1.38629 1.38629 1.38629 1.38629
48481 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48482 35 0.15719 3.27118 2.73043 3.16274 35 - -
48483 1.38629 1.38629 1.38629 1.38629
48484 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48485 36 3.30705 0.14631 3.36166 2.73626 36 - -
48486 1.38629 1.38629 1.38629 1.38629
48487 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48488 37 2.97980 2.52563 3.03204 0.19727 37 - -
48489 1.38629 1.38629 1.38629 1.38629
48490 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48491 38 2.97980 2.52563 3.03204 0.19727 38 - -
48492 1.38629 1.38629 1.38629 1.38629
48493 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48494 39 0.15719 3.27118 2.73043 3.16274 39 - -
48495 1.38629 1.38629 1.38629 1.38629
48496 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48497 40 0.15719 3.27118 2.73043 3.16274 40 - -
48498 1.38629 1.38629 1.38629 1.38629
48499 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48500 41 2.86982 3.47591 0.13017 3.36931 41 - -
48501 1.38629 1.38629 1.38629 1.38629
48502 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48503 42 3.30705 0.14631 3.36166 2.73626 42 - -
48504 1.38629 1.38629 1.38629 1.38629
48505 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48506 43 0.15719 3.27118 2.73043 3.16274 43 - -
48507 1.38629 1.38629 1.38629 1.38629
48508 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48509 44 2.97980 2.52563 3.03204 0.19727 44 - -
48510 1.38629 1.38629 1.38629 1.38629
48511 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
48512 45 0.15719 3.27118 2.73043 3.16274 45 - -
48513 1.38629 1.38629 1.38629 1.38629
48514 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
48515 //
48516 HMMER3/b [3.0 | March 2010]
48517 NAME 4_LSU_Metazoa_4_LSU_start_thirteene_long
48518 LENG 45
48519 ALPH DNA
48520 RF no
48521 CS no
48522 MAP yes
48523 DATE Mon Feb 27 22:58:15 2012
48524 NSEQ 4
48525 EFFN 3.332031
48526 CKSUM 3888805481
48527 STATS LOCAL MSV -8.0259 0.71933
48528 STATS LOCAL VITERBI -7.5825 0.71933
48529 STATS LOCAL FORWARD -3.7267 0.71933
48530 HMM A C G T
48531 m->m m->i m->d i->m i->i d->m d->d
48532 COMPO 1.12169 1.25795 1.51072 1.77619
48533 1.38629 1.38629 1.38629 1.38629
48534 0.03682 4.01314 4.01314 1.46634 0.26236 0.00000 *
48535 1 3.43655 0.12980 3.48587 2.83150 1 - -
48536 1.38629 1.38629 1.38629 1.38629
48537 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48538 2 0.14150 3.38325 2.80387 3.28520 2 - -
48539 1.38629 1.38629 1.38629 1.38629
48540 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48541 3 0.14150 3.38325 2.80387 3.28520 3 - -
48542 1.38629 1.38629 1.38629 1.38629
48543 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48544 4 3.43655 0.12980 3.48587 2.83150 4 - -
48545 1.38629 1.38629 1.38629 1.38629
48546 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48547 5 2.94961 3.59079 0.11683 3.49577 5 - -
48548 1.38629 1.38629 1.38629 1.38629
48549 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48550 6 0.14150 3.38325 2.80387 3.28520 6 - -
48551 1.38629 1.38629 1.38629 1.38629
48552 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48553 7 3.43655 0.12980 3.48587 2.83150 7 - -
48554 1.38629 1.38629 1.38629 1.38629
48555 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48556 8 3.43655 0.12980 3.48587 2.83150 8 - -
48557 1.38629 1.38629 1.38629 1.38629
48558 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48559 9 3.09163 2.59706 3.13967 0.17819 9 - -
48560 1.38629 1.38629 1.38629 1.38629
48561 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48562 10 3.43655 0.12980 3.48587 2.83150 10 - -
48563 1.38629 1.38629 1.38629 1.38629
48564 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48565 11 0.14150 3.38325 2.80387 3.28520 11 - -
48566 1.38629 1.38629 1.38629 1.38629
48567 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48568 12 2.94961 3.59079 0.11683 3.49577 12 - -
48569 1.38629 1.38629 1.38629 1.38629
48570 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48571 13 0.14150 3.38325 2.80387 3.28520 13 - -
48572 1.38629 1.38629 1.38629 1.38629
48573 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48574 14 2.94961 3.59079 0.11683 3.49577 14 - -
48575 1.38629 1.38629 1.38629 1.38629
48576 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48577 15 3.43655 0.12980 3.48587 2.83150 15 - -
48578 1.38629 1.38629 1.38629 1.38629
48579 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48580 16 0.14150 3.38325 2.80387 3.28520 16 - -
48581 1.38629 1.38629 1.38629 1.38629
48582 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48583 17 2.94961 3.59079 0.11683 3.49577 17 - -
48584 1.38629 1.38629 1.38629 1.38629
48585 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48586 18 2.94961 3.59079 0.11683 3.49577 18 - -
48587 1.38629 1.38629 1.38629 1.38629
48588 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48589 19 3.43655 0.12980 3.48587 2.83150 19 - -
48590 1.38629 1.38629 1.38629 1.38629
48591 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48592 20 2.94961 3.59079 0.11683 3.49577 20 - -
48593 1.38629 1.38629 1.38629 1.38629
48594 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48595 21 0.14150 3.38325 2.80387 3.28520 21 - -
48596 1.38629 1.38629 1.38629 1.38629
48597 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48598 22 2.94961 3.59079 0.11683 3.49577 22 - -
48599 1.38629 1.38629 1.38629 1.38629
48600 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48601 23 0.14150 3.38325 2.80387 3.28520 23 - -
48602 1.38629 1.38629 1.38629 1.38629
48603 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48604 24 3.43655 0.12980 3.48587 2.83150 24 - -
48605 1.38629 1.38629 1.38629 1.38629
48606 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48607 25 3.09163 2.59706 3.13967 0.17819 25 - -
48608 1.38629 1.38629 1.38629 1.38629
48609 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48610 26 0.14150 3.38325 2.80387 3.28520 26 - -
48611 1.38629 1.38629 1.38629 1.38629
48612 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48613 27 3.43655 0.12980 3.48587 2.83150 27 - -
48614 1.38629 1.38629 1.38629 1.38629
48615 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48616 28 3.43655 0.12980 3.48587 2.83150 28 - -
48617 1.38629 1.38629 1.38629 1.38629
48618 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48619 29 3.43655 0.12980 3.48587 2.83150 29 - -
48620 1.38629 1.38629 1.38629 1.38629
48621 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48622 30 0.40370 2.75421 1.63104 2.62041 30 - -
48623 1.38629 1.38629 1.38629 1.38629
48624 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48625 31 3.43655 0.12980 3.48587 2.83150 31 - -
48626 1.38629 1.38629 1.38629 1.38629
48627 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48628 32 3.09163 2.59706 3.13967 0.17819 32 - -
48629 1.38629 1.38629 1.38629 1.38629
48630 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48631 33 2.94961 3.59079 0.11683 3.49577 33 - -
48632 1.38629 1.38629 1.38629 1.38629
48633 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48634 34 0.14150 3.38325 2.80387 3.28520 34 - -
48635 1.38629 1.38629 1.38629 1.38629
48636 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48637 35 0.14150 3.38325 2.80387 3.28520 35 - -
48638 1.38629 1.38629 1.38629 1.38629
48639 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48640 36 2.59252 1.55117 2.65827 0.44146 36 - -
48641 1.38629 1.38629 1.38629 1.38629
48642 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48643 37 3.09163 2.59706 3.13967 0.17819 37 - -
48644 1.38629 1.38629 1.38629 1.38629
48645 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48646 38 3.09163 2.59706 3.13967 0.17819 38 - -
48647 1.38629 1.38629 1.38629 1.38629
48648 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48649 39 0.14150 3.38325 2.80387 3.28520 39 - -
48650 1.38629 1.38629 1.38629 1.38629
48651 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48652 40 0.14150 3.38325 2.80387 3.28520 40 - -
48653 1.38629 1.38629 1.38629 1.38629
48654 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48655 41 2.94961 3.59079 0.11683 3.49577 41 - -
48656 1.38629 1.38629 1.38629 1.38629
48657 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48658 42 3.43655 0.12980 3.48587 2.83150 42 - -
48659 1.38629 1.38629 1.38629 1.38629
48660 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48661 43 0.14150 3.38325 2.80387 3.28520 43 - -
48662 1.38629 1.38629 1.38629 1.38629
48663 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48664 44 3.09163 2.59706 3.13967 0.17819 44 - -
48665 1.38629 1.38629 1.38629 1.38629
48666 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547
48667 45 0.14150 3.38325 2.80387 3.28520 45 - -
48668 1.38629 1.38629 1.38629 1.38629
48669 0.01858 3.99490 * 1.46634 0.26236 0.00000 *
48670 //
48671 HMMER3/b [3.0 | March 2010]
48672 NAME 4_LSU_Metazoa_4_LSU_start_thirteenf_long
48673 LENG 45
48674 ALPH DNA
48675 RF no
48676 CS no
48677 MAP yes
48678 DATE Mon Feb 27 22:58:22 2012
48679 NSEQ 30
48680 EFFN 3.314209
48681 CKSUM 3930340295
48682 STATS LOCAL MSV -8.2137 0.71933
48683 STATS LOCAL VITERBI -7.6701 0.71933
48684 STATS LOCAL FORWARD -4.2107 0.71933
48685 HMM A C G T
48686 m->m m->i m->d i->m i->i d->m d->d
48687 COMPO 1.21644 1.32636 1.53322 1.50310
48688 1.38629 1.38629 1.38629 1.38629
48689 0.03694 4.00991 4.00991 1.46634 0.26236 0.00000 *
48690 1 0.14225 3.37755 2.80016 3.27895 1 - -
48691 1.38629 1.38629 1.38629 1.38629
48692 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48693 2 3.08587 2.59340 3.13413 0.17912 2 - -
48694 1.38629 1.38629 1.38629 1.38629
48695 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48696 3 3.42998 0.13058 3.47957 2.82672 3 - -
48697 1.38629 1.38629 1.38629 1.38629
48698 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48699 4 3.42998 0.13058 3.47957 2.82672 4 - -
48700 1.38629 1.38629 1.38629 1.38629
48701 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48702 5 2.94563 3.58500 0.11746 3.48938 5 - -
48703 1.38629 1.38629 1.38629 1.38629
48704 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48705 6 0.14225 3.37755 2.80016 3.27895 6 - -
48706 1.38629 1.38629 1.38629 1.38629
48707 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48708 7 3.42998 0.13058 3.47957 2.82672 7 - -
48709 1.38629 1.38629 1.38629 1.38629
48710 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48711 8 3.42998 0.13058 3.47957 2.82672 8 - -
48712 1.38629 1.38629 1.38629 1.38629
48713 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48714 9 3.08587 2.59340 3.13413 0.17912 9 - -
48715 1.38629 1.38629 1.38629 1.38629
48716 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48717 10 3.42998 0.13058 3.47957 2.82672 10 - -
48718 1.38629 1.38629 1.38629 1.38629
48719 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48720 11 0.14225 3.37755 2.80016 3.27895 11 - -
48721 1.38629 1.38629 1.38629 1.38629
48722 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48723 12 2.94563 3.58500 0.11746 3.48938 12 - -
48724 1.38629 1.38629 1.38629 1.38629
48725 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48726 13 0.14225 3.37755 2.80016 3.27895 13 - -
48727 1.38629 1.38629 1.38629 1.38629
48728 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48729 14 3.08587 2.59340 3.13413 0.17912 14 - -
48730 1.38629 1.38629 1.38629 1.38629
48731 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48732 15 3.42998 0.13058 3.47957 2.82672 15 - -
48733 1.38629 1.38629 1.38629 1.38629
48734 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48735 16 2.94563 3.58500 0.11746 3.48938 16 - -
48736 1.38629 1.38629 1.38629 1.38629
48737 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48738 17 2.66390 2.61000 0.21952 2.92094 17 - -
48739 1.38629 1.38629 1.38629 1.38629
48740 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48741 18 0.14225 3.37755 2.80016 3.27895 18 - -
48742 1.38629 1.38629 1.38629 1.38629
48743 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48744 19 3.42998 0.13058 3.47957 2.82672 19 - -
48745 1.38629 1.38629 1.38629 1.38629
48746 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48747 20 2.94563 3.58500 0.11746 3.48938 20 - -
48748 1.38629 1.38629 1.38629 1.38629
48749 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48750 21 0.14225 3.37755 2.80016 3.27895 21 - -
48751 1.38629 1.38629 1.38629 1.38629
48752 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48753 22 2.94563 3.58500 0.11746 3.48938 22 - -
48754 1.38629 1.38629 1.38629 1.38629
48755 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48756 23 0.14225 3.37755 2.80016 3.27895 23 - -
48757 1.38629 1.38629 1.38629 1.38629
48758 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48759 24 3.08587 2.59340 3.13413 0.17912 24 - -
48760 1.38629 1.38629 1.38629 1.38629
48761 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48762 25 3.08587 2.59340 3.13413 0.17912 25 - -
48763 1.38629 1.38629 1.38629 1.38629
48764 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48765 26 0.14225 3.37755 2.80016 3.27895 26 - -
48766 1.38629 1.38629 1.38629 1.38629
48767 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48768 27 3.42998 0.13058 3.47957 2.82672 27 - -
48769 1.38629 1.38629 1.38629 1.38629
48770 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48771 28 3.07458 0.19377 2.84308 2.63525 28 - -
48772 1.38629 1.38629 1.38629 1.38629
48773 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48774 29 3.42998 0.13058 3.47957 2.82672 29 - -
48775 1.38629 1.38629 1.38629 1.38629
48776 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48777 30 2.94563 3.58500 0.11746 3.48938 30 - -
48778 1.38629 1.38629 1.38629 1.38629
48779 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48780 31 3.42998 0.13058 3.47957 2.82672 31 - -
48781 1.38629 1.38629 1.38629 1.38629
48782 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48783 32 3.08587 2.59340 3.13413 0.17912 32 - -
48784 1.38629 1.38629 1.38629 1.38629
48785 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48786 33 2.94563 3.58500 0.11746 3.48938 33 - -
48787 1.38629 1.38629 1.38629 1.38629
48788 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48789 34 0.14225 3.37755 2.80016 3.27895 34 - -
48790 1.38629 1.38629 1.38629 1.38629
48791 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48792 35 0.14225 3.37755 2.80016 3.27895 35 - -
48793 1.38629 1.38629 1.38629 1.38629
48794 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48795 36 3.08587 2.59340 3.13413 0.17912 36 - -
48796 1.38629 1.38629 1.38629 1.38629
48797 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48798 37 3.08587 2.59340 3.13413 0.17912 37 - -
48799 1.38629 1.38629 1.38629 1.38629
48800 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48801 38 3.08587 2.59340 3.13413 0.17912 38 - -
48802 1.38629 1.38629 1.38629 1.38629
48803 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48804 39 0.14225 3.37755 2.80016 3.27895 39 - -
48805 1.38629 1.38629 1.38629 1.38629
48806 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48807 40 0.14225 3.37755 2.80016 3.27895 40 - -
48808 1.38629 1.38629 1.38629 1.38629
48809 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48810 41 2.94563 3.58500 0.11746 3.48938 41 - -
48811 1.38629 1.38629 1.38629 1.38629
48812 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48813 42 3.42998 0.13058 3.47957 2.82672 42 - -
48814 1.38629 1.38629 1.38629 1.38629
48815 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48816 43 0.14225 3.37755 2.80016 3.27895 43 - -
48817 1.38629 1.38629 1.38629 1.38629
48818 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48819 44 3.08587 2.59340 3.13413 0.17912 44 - -
48820 1.38629 1.38629 1.38629 1.38629
48821 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547
48822 45 0.14225 3.37755 2.80016 3.27895 45 - -
48823 1.38629 1.38629 1.38629 1.38629
48824 0.01864 3.99161 * 1.46634 0.26236 0.00000 *
48825 //
48826 HMMER3/b [3.0 | March 2010]
48827 NAME 4_LSU_Metazoa_4_LSU_start_thirtyeight_long
48828 LENG 45
48829 ALPH DNA
48830 RF no
48831 CS no
48832 MAP yes
48833 DATE Wed Feb 29 11:37:15 2012
48834 NSEQ 4
48835 EFFN 3.660156
48836 CKSUM 172308360
48837 STATS LOCAL MSV -7.5788 0.71932
48838 STATS LOCAL VITERBI -7.7425 0.71932
48839 STATS LOCAL FORWARD -4.2739 0.71932
48840 HMM A C G T
48841 m->m m->i m->d i->m i->i d->m d->d
48842 COMPO 1.28564 1.28833 1.51910 1.47453
48843 1.38629 1.38629 1.38629 1.38629
48844 0.03472 4.07076 4.07076 1.46634 0.26236 0.00000 *
48845 1 3.19300 2.66139 3.23711 0.16273 1 - -
48846 1.38629 1.38629 1.38629 1.38629
48847 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48848 2 3.19300 2.66139 3.23711 0.16273 2 - -
48849 1.38629 1.38629 1.38629 1.38629
48850 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48851 3 3.19300 2.66139 3.23711 0.16273 3 - -
48852 1.38629 1.38629 1.38629 1.38629
48853 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48854 4 2.46500 0.94717 2.53631 0.80297 4 - -
48855 1.38629 1.38629 1.38629 1.38629
48856 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48857 5 3.01755 3.69041 0.10652 3.60597 5 - -
48858 1.38629 1.38629 1.38629 1.38629
48859 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48860 6 0.12911 3.48247 2.86794 3.39398 6 - -
48861 1.38629 1.38629 1.38629 1.38629
48862 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48863 7 3.55045 0.11705 3.59478 2.91367 7 - -
48864 1.38629 1.38629 1.38629 1.38629
48865 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48866 8 3.55045 0.11705 3.59478 2.91367 8 - -
48867 1.38629 1.38629 1.38629 1.38629
48868 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48869 9 3.19300 2.66139 3.23711 0.16273 9 - -
48870 1.38629 1.38629 1.38629 1.38629
48871 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48872 10 3.01755 3.69041 0.10652 3.60597 10 - -
48873 1.38629 1.38629 1.38629 1.38629
48874 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48875 11 0.12911 3.48247 2.86794 3.39398 11 - -
48876 1.38629 1.38629 1.38629 1.38629
48877 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48878 12 0.12911 3.48247 2.86794 3.39398 12 - -
48879 1.38629 1.38629 1.38629 1.38629
48880 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48881 13 3.55045 0.11705 3.59478 2.91367 13 - -
48882 1.38629 1.38629 1.38629 1.38629
48883 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48884 14 3.19300 2.66139 3.23711 0.16273 14 - -
48885 1.38629 1.38629 1.38629 1.38629
48886 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48887 15 3.55045 0.11705 3.59478 2.91367 15 - -
48888 1.38629 1.38629 1.38629 1.38629
48889 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48890 16 0.12911 3.48247 2.86794 3.39398 16 - -
48891 1.38629 1.38629 1.38629 1.38629
48892 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48893 17 3.01755 3.69041 0.10652 3.60597 17 - -
48894 1.38629 1.38629 1.38629 1.38629
48895 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48896 18 0.96244 2.18570 2.20249 0.92858 18 - -
48897 1.38629 1.38629 1.38629 1.38629
48898 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48899 19 3.55045 0.11705 3.59478 2.91367 19 - -
48900 1.38629 1.38629 1.38629 1.38629
48901 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48902 20 3.01755 3.69041 0.10652 3.60597 20 - -
48903 1.38629 1.38629 1.38629 1.38629
48904 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48905 21 0.96244 2.18570 2.20249 0.92858 21 - -
48906 1.38629 1.38629 1.38629 1.38629
48907 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48908 22 3.01755 3.69041 0.10652 3.60597 22 - -
48909 1.38629 1.38629 1.38629 1.38629
48910 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48911 23 0.12911 3.48247 2.86794 3.39398 23 - -
48912 1.38629 1.38629 1.38629 1.38629
48913 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48914 24 3.01755 3.69041 0.10652 3.60597 24 - -
48915 1.38629 1.38629 1.38629 1.38629
48916 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48917 25 3.55045 0.11705 3.59478 2.91367 25 - -
48918 1.38629 1.38629 1.38629 1.38629
48919 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48920 26 0.12911 3.48247 2.86794 3.39398 26 - -
48921 1.38629 1.38629 1.38629 1.38629
48922 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48923 27 3.55045 0.11705 3.59478 2.91367 27 - -
48924 1.38629 1.38629 1.38629 1.38629
48925 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48926 28 3.55045 0.11705 3.59478 2.91367 28 - -
48927 1.38629 1.38629 1.38629 1.38629
48928 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48929 29 3.55045 0.11705 3.59478 2.91367 29 - -
48930 1.38629 1.38629 1.38629 1.38629
48931 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48932 30 3.01755 3.69041 0.10652 3.60597 30 - -
48933 1.38629 1.38629 1.38629 1.38629
48934 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48935 31 3.55045 0.11705 3.59478 2.91367 31 - -
48936 1.38629 1.38629 1.38629 1.38629
48937 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48938 32 3.19300 2.66139 3.23711 0.16273 32 - -
48939 1.38629 1.38629 1.38629 1.38629
48940 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48941 33 3.01755 3.69041 0.10652 3.60597 33 - -
48942 1.38629 1.38629 1.38629 1.38629
48943 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48944 34 0.12911 3.48247 2.86794 3.39398 34 - -
48945 1.38629 1.38629 1.38629 1.38629
48946 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48947 35 0.12911 3.48247 2.86794 3.39398 35 - -
48948 1.38629 1.38629 1.38629 1.38629
48949 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48950 36 3.55045 0.11705 3.59478 2.91367 36 - -
48951 1.38629 1.38629 1.38629 1.38629
48952 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48953 37 3.19300 2.66139 3.23711 0.16273 37 - -
48954 1.38629 1.38629 1.38629 1.38629
48955 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48956 38 3.19300 2.66139 3.23711 0.16273 38 - -
48957 1.38629 1.38629 1.38629 1.38629
48958 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48959 39 0.12911 3.48247 2.86794 3.39398 39 - -
48960 1.38629 1.38629 1.38629 1.38629
48961 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48962 40 0.12911 3.48247 2.86794 3.39398 40 - -
48963 1.38629 1.38629 1.38629 1.38629
48964 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48965 41 3.01755 3.69041 0.10652 3.60597 41 - -
48966 1.38629 1.38629 1.38629 1.38629
48967 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48968 42 3.55045 0.11705 3.59478 2.91367 42 - -
48969 1.38629 1.38629 1.38629 1.38629
48970 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48971 43 0.12911 3.48247 2.86794 3.39398 43 - -
48972 1.38629 1.38629 1.38629 1.38629
48973 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48974 44 3.19300 2.66139 3.23711 0.16273 44 - -
48975 1.38629 1.38629 1.38629 1.38629
48976 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547
48977 45 0.12911 3.48247 2.86794 3.39398 45 - -
48978 1.38629 1.38629 1.38629 1.38629
48979 0.01751 4.05355 * 1.46634 0.26236 0.00000 *
48980 //
48981 HMMER3/b [3.0 | March 2010]
48982 NAME 4_LSU_Metazoa_4_LSU_start_thirtyfivea_long
48983 LENG 45
48984 ALPH DNA
48985 RF no
48986 CS no
48987 MAP yes
48988 DATE Wed Feb 29 11:36:29 2012
48989 NSEQ 2
48990 EFFN 2.000000
48991 CKSUM 2251262723
48992 STATS LOCAL MSV -7.6478 0.72857
48993 STATS LOCAL VITERBI -8.3386 0.72857
48994 STATS LOCAL FORWARD -3.4900 0.72857
48995 HMM A C G T
48996 m->m m->i m->d i->m i->i d->m d->d
48997 COMPO 1.22063 1.28733 1.53896 1.54017
48998 1.38629 1.38629 1.38629 1.38629
48999 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
49000 1 2.81865 0.23582 2.88868 2.35662 1 - -
49001 1.38629 1.38629 1.38629 1.38629
49002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49003 2 2.57915 2.25909 2.64442 0.28946 2 - -
49004 1.38629 1.38629 1.38629 1.38629
49005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49006 3 2.81865 0.23582 2.88868 2.35662 3 - -
49007 1.38629 1.38629 1.38629 1.38629
49008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49009 4 2.81865 0.23582 2.88868 2.35662 4 - -
49010 1.38629 1.38629 1.38629 1.38629
49011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49012 5 2.53331 3.02441 0.20344 2.88069 5 - -
49013 1.38629 1.38629 1.38629 1.38629
49014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49015 6 0.23862 2.84929 2.43386 2.70756 6 - -
49016 1.38629 1.38629 1.38629 1.38629
49017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49018 7 2.81865 0.23582 2.88868 2.35662 7 - -
49019 1.38629 1.38629 1.38629 1.38629
49020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49021 8 2.81865 0.23582 2.88868 2.35662 8 - -
49022 1.38629 1.38629 1.38629 1.38629
49023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49024 9 2.57915 2.25909 2.64442 0.28946 9 - -
49025 1.38629 1.38629 1.38629 1.38629
49026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49027 10 2.81865 0.23582 2.88868 2.35662 10 - -
49028 1.38629 1.38629 1.38629 1.38629
49029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49030 11 0.23862 2.84929 2.43386 2.70756 11 - -
49031 1.38629 1.38629 1.38629 1.38629
49032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49033 12 0.92825 2.28391 0.95698 2.13014 12 - -
49034 1.38629 1.38629 1.38629 1.38629
49035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49036 13 0.23862 2.84929 2.43386 2.70756 13 - -
49037 1.38629 1.38629 1.38629 1.38629
49038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49039 14 2.57915 2.25909 2.64442 0.28946 14 - -
49040 1.38629 1.38629 1.38629 1.38629
49041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49042 15 2.81865 0.23582 2.88868 2.35662 15 - -
49043 1.38629 1.38629 1.38629 1.38629
49044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49045 16 0.23862 2.84929 2.43386 2.70756 16 - -
49046 1.38629 1.38629 1.38629 1.38629
49047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49048 17 2.53331 3.02441 0.20344 2.88069 17 - -
49049 1.38629 1.38629 1.38629 1.38629
49050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49051 18 0.23862 2.84929 2.43386 2.70756 18 - -
49052 1.38629 1.38629 1.38629 1.38629
49053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49054 19 2.81865 0.23582 2.88868 2.35662 19 - -
49055 1.38629 1.38629 1.38629 1.38629
49056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49057 20 2.53331 3.02441 0.20344 2.88069 20 - -
49058 1.38629 1.38629 1.38629 1.38629
49059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49060 21 0.23862 2.84929 2.43386 2.70756 21 - -
49061 1.38629 1.38629 1.38629 1.38629
49062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49063 22 2.53331 3.02441 0.20344 2.88069 22 - -
49064 1.38629 1.38629 1.38629 1.38629
49065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49066 23 0.23862 2.84929 2.43386 2.70756 23 - -
49067 1.38629 1.38629 1.38629 1.38629
49068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49069 24 2.53331 3.02441 0.20344 2.88069 24 - -
49070 1.38629 1.38629 1.38629 1.38629
49071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49072 25 2.57915 2.25909 2.64442 0.28946 25 - -
49073 1.38629 1.38629 1.38629 1.38629
49074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49075 26 0.23862 2.84929 2.43386 2.70756 26 - -
49076 1.38629 1.38629 1.38629 1.38629
49077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49078 27 2.81865 0.23582 2.88868 2.35662 27 - -
49079 1.38629 1.38629 1.38629 1.38629
49080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49081 28 2.81865 0.23582 2.88868 2.35662 28 - -
49082 1.38629 1.38629 1.38629 1.38629
49083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49084 29 2.81865 0.23582 2.88868 2.35662 29 - -
49085 1.38629 1.38629 1.38629 1.38629
49086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49087 30 2.53331 3.02441 0.20344 2.88069 30 - -
49088 1.38629 1.38629 1.38629 1.38629
49089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49090 31 2.81865 0.23582 2.88868 2.35662 31 - -
49091 1.38629 1.38629 1.38629 1.38629
49092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49093 32 2.57915 2.25909 2.64442 0.28946 32 - -
49094 1.38629 1.38629 1.38629 1.38629
49095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49096 33 2.53331 3.02441 0.20344 2.88069 33 - -
49097 1.38629 1.38629 1.38629 1.38629
49098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49099 34 0.23862 2.84929 2.43386 2.70756 34 - -
49100 1.38629 1.38629 1.38629 1.38629
49101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49102 35 0.23862 2.84929 2.43386 2.70756 35 - -
49103 1.38629 1.38629 1.38629 1.38629
49104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49105 36 2.57915 2.25909 2.64442 0.28946 36 - -
49106 1.38629 1.38629 1.38629 1.38629
49107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49108 37 2.57915 2.25909 2.64442 0.28946 37 - -
49109 1.38629 1.38629 1.38629 1.38629
49110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49111 38 2.57915 2.25909 2.64442 0.28946 38 - -
49112 1.38629 1.38629 1.38629 1.38629
49113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49114 39 0.23862 2.84929 2.43386 2.70756 39 - -
49115 1.38629 1.38629 1.38629 1.38629
49116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49117 40 0.23862 2.84929 2.43386 2.70756 40 - -
49118 1.38629 1.38629 1.38629 1.38629
49119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49120 41 2.53331 3.02441 0.20344 2.88069 41 - -
49121 1.38629 1.38629 1.38629 1.38629
49122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49123 42 2.81865 0.23582 2.88868 2.35662 42 - -
49124 1.38629 1.38629 1.38629 1.38629
49125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49126 43 0.23862 2.84929 2.43386 2.70756 43 - -
49127 1.38629 1.38629 1.38629 1.38629
49128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49129 44 2.57915 2.25909 2.64442 0.28946 44 - -
49130 1.38629 1.38629 1.38629 1.38629
49131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49132 45 0.23862 2.84929 2.43386 2.70756 45 - -
49133 1.38629 1.38629 1.38629 1.38629
49134 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
49135 //
49136 HMMER3/b [3.0 | March 2010]
49137 NAME 4_LSU_Metazoa_4_LSU_start_thirtyfiveb_long
49138 LENG 45
49139 ALPH DNA
49140 RF no
49141 CS no
49142 MAP yes
49143 DATE Wed Feb 29 11:36:36 2012
49144 NSEQ 4
49145 EFFN 3.324219
49146 CKSUM 223359380
49147 STATS LOCAL MSV -8.2434 0.71932
49148 STATS LOCAL VITERBI -7.8397 0.71932
49149 STATS LOCAL FORWARD -4.0517 0.71932
49150 HMM A C G T
49151 m->m m->i m->d i->m i->i d->m d->d
49152 COMPO 1.15527 1.22784 1.60527 1.65408
49153 1.38629 1.38629 1.38629 1.38629
49154 0.03688 4.01173 4.01173 1.46634 0.26236 0.00000 *
49155 1 1.57609 0.55050 2.35295 2.10809 1 - -
49156 1.38629 1.38629 1.38629 1.38629
49157 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49158 2 3.08911 2.59546 3.13724 0.17860 2 - -
49159 1.38629 1.38629 1.38629 1.38629
49160 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49161 3 3.43368 0.13014 3.48311 2.82941 3 - -
49162 1.38629 1.38629 1.38629 1.38629
49163 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49164 4 3.43368 0.13014 3.48311 2.82941 4 - -
49165 1.38629 1.38629 1.38629 1.38629
49166 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49167 5 2.94787 3.58826 0.11710 3.49298 5 - -
49168 1.38629 1.38629 1.38629 1.38629
49169 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49170 6 0.14183 3.38076 2.80224 3.28247 6 - -
49171 1.38629 1.38629 1.38629 1.38629
49172 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49173 7 3.43368 0.13014 3.48311 2.82941 7 - -
49174 1.38629 1.38629 1.38629 1.38629
49175 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49176 8 3.43368 0.13014 3.48311 2.82941 8 - -
49177 1.38629 1.38629 1.38629 1.38629
49178 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49179 9 3.08911 2.59546 3.13724 0.17860 9 - -
49180 1.38629 1.38629 1.38629 1.38629
49181 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49182 10 2.94787 3.58826 0.11710 3.49298 10 - -
49183 1.38629 1.38629 1.38629 1.38629
49184 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49185 11 0.14183 3.38076 2.80224 3.28247 11 - -
49186 1.38629 1.38629 1.38629 1.38629
49187 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49188 12 2.94787 3.58826 0.11710 3.49298 12 - -
49189 1.38629 1.38629 1.38629 1.38629
49190 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49191 13 0.14183 3.38076 2.80224 3.28247 13 - -
49192 1.38629 1.38629 1.38629 1.38629
49193 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49194 14 3.08911 2.59546 3.13724 0.17860 14 - -
49195 1.38629 1.38629 1.38629 1.38629
49196 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49197 15 3.43368 0.13014 3.48311 2.82941 15 - -
49198 1.38629 1.38629 1.38629 1.38629
49199 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49200 16 0.14183 3.38076 2.80224 3.28247 16 - -
49201 1.38629 1.38629 1.38629 1.38629
49202 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49203 17 2.94787 3.58826 0.11710 3.49298 17 - -
49204 1.38629 1.38629 1.38629 1.38629
49205 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49206 18 0.14183 3.38076 2.80224 3.28247 18 - -
49207 1.38629 1.38629 1.38629 1.38629
49208 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49209 19 3.43368 0.13014 3.48311 2.82941 19 - -
49210 1.38629 1.38629 1.38629 1.38629
49211 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49212 20 2.94787 3.58826 0.11710 3.49298 20 - -
49213 1.38629 1.38629 1.38629 1.38629
49214 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49215 21 0.14183 3.38076 2.80224 3.28247 21 - -
49216 1.38629 1.38629 1.38629 1.38629
49217 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49218 22 2.94787 3.58826 0.11710 3.49298 22 - -
49219 1.38629 1.38629 1.38629 1.38629
49220 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49221 23 0.14183 3.38076 2.80224 3.28247 23 - -
49222 1.38629 1.38629 1.38629 1.38629
49223 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49224 24 3.43368 0.13014 3.48311 2.82941 24 - -
49225 1.38629 1.38629 1.38629 1.38629
49226 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49227 25 0.14183 3.38076 2.80224 3.28247 25 - -
49228 1.38629 1.38629 1.38629 1.38629
49229 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49230 26 0.14183 3.38076 2.80224 3.28247 26 - -
49231 1.38629 1.38629 1.38629 1.38629
49232 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49233 27 3.43368 0.13014 3.48311 2.82941 27 - -
49234 1.38629 1.38629 1.38629 1.38629
49235 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49236 28 3.43368 0.13014 3.48311 2.82941 28 - -
49237 1.38629 1.38629 1.38629 1.38629
49238 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49239 29 3.43368 0.13014 3.48311 2.82941 29 - -
49240 1.38629 1.38629 1.38629 1.38629
49241 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49242 30 3.43368 0.13014 3.48311 2.82941 30 - -
49243 1.38629 1.38629 1.38629 1.38629
49244 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49245 31 3.43368 0.13014 3.48311 2.82941 31 - -
49246 1.38629 1.38629 1.38629 1.38629
49247 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49248 32 3.08911 2.59546 3.13724 0.17860 32 - -
49249 1.38629 1.38629 1.38629 1.38629
49250 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49251 33 2.94787 3.58826 0.11710 3.49298 33 - -
49252 1.38629 1.38629 1.38629 1.38629
49253 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49254 34 0.14183 3.38076 2.80224 3.28247 34 - -
49255 1.38629 1.38629 1.38629 1.38629
49256 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49257 35 0.14183 3.38076 2.80224 3.28247 35 - -
49258 1.38629 1.38629 1.38629 1.38629
49259 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49260 36 3.08911 2.59546 3.13724 0.17860 36 - -
49261 1.38629 1.38629 1.38629 1.38629
49262 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49263 37 3.08911 2.59546 3.13724 0.17860 37 - -
49264 1.38629 1.38629 1.38629 1.38629
49265 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49266 38 3.08911 2.59546 3.13724 0.17860 38 - -
49267 1.38629 1.38629 1.38629 1.38629
49268 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49269 39 0.14183 3.38076 2.80224 3.28247 39 - -
49270 1.38629 1.38629 1.38629 1.38629
49271 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49272 40 0.14183 3.38076 2.80224 3.28247 40 - -
49273 1.38629 1.38629 1.38629 1.38629
49274 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49275 41 2.94787 3.58826 0.11710 3.49298 41 - -
49276 1.38629 1.38629 1.38629 1.38629
49277 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49278 42 3.43368 0.13014 3.48311 2.82941 42 - -
49279 1.38629 1.38629 1.38629 1.38629
49280 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49281 43 0.14183 3.38076 2.80224 3.28247 43 - -
49282 1.38629 1.38629 1.38629 1.38629
49283 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49284 44 3.08911 2.59546 3.13724 0.17860 44 - -
49285 1.38629 1.38629 1.38629 1.38629
49286 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
49287 45 0.14183 3.38076 2.80224 3.28247 45 - -
49288 1.38629 1.38629 1.38629 1.38629
49289 0.01861 3.99346 * 1.46634 0.26236 0.00000 *
49290 //
49291 HMMER3/b [3.0 | March 2010]
49292 NAME 4_LSU_Metazoa_4_LSU_start_thirtyfivec_long
49293 LENG 45
49294 ALPH DNA
49295 RF no
49296 CS no
49297 MAP yes
49298 DATE Wed Feb 29 11:36:40 2012
49299 NSEQ 3
49300 EFFN 3.000000
49301 CKSUM 929202663
49302 STATS LOCAL MSV -8.0030 0.72088
49303 STATS LOCAL VITERBI -7.9152 0.72088
49304 STATS LOCAL FORWARD -4.0145 0.72088
49305 HMM A C G T
49306 m->m m->i m->d i->m i->i d->m d->d
49307 COMPO 1.27679 1.32055 1.55992 1.41088
49308 1.38629 1.38629 1.38629 1.38629
49309 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
49310 1 2.97980 2.52563 3.03204 0.19727 1 - -
49311 1.38629 1.38629 1.38629 1.38629
49312 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49313 2 2.97980 2.52563 3.03204 0.19727 2 - -
49314 1.38629 1.38629 1.38629 1.38629
49315 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49316 3 2.97980 2.52563 3.03204 0.19727 3 - -
49317 1.38629 1.38629 1.38629 1.38629
49318 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49319 4 2.97980 2.52563 3.03204 0.19727 4 - -
49320 1.38629 1.38629 1.38629 1.38629
49321 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49322 5 2.86982 3.47591 0.13017 3.36931 5 - -
49323 1.38629 1.38629 1.38629 1.38629
49324 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49325 6 0.15719 3.27118 2.73043 3.16274 6 - -
49326 1.38629 1.38629 1.38629 1.38629
49327 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49328 7 3.30705 0.14631 3.36166 2.73626 7 - -
49329 1.38629 1.38629 1.38629 1.38629
49330 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49331 8 3.30705 0.14631 3.36166 2.73626 8 - -
49332 1.38629 1.38629 1.38629 1.38629
49333 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49334 9 2.97980 2.52563 3.03204 0.19727 9 - -
49335 1.38629 1.38629 1.38629 1.38629
49336 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49337 10 2.86982 3.47591 0.13017 3.36931 10 - -
49338 1.38629 1.38629 1.38629 1.38629
49339 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49340 11 0.15719 3.27118 2.73043 3.16274 11 - -
49341 1.38629 1.38629 1.38629 1.38629
49342 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49343 12 0.15719 3.27118 2.73043 3.16274 12 - -
49344 1.38629 1.38629 1.38629 1.38629
49345 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49346 13 3.30705 0.14631 3.36166 2.73626 13 - -
49347 1.38629 1.38629 1.38629 1.38629
49348 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49349 14 2.97980 2.52563 3.03204 0.19727 14 - -
49350 1.38629 1.38629 1.38629 1.38629
49351 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49352 15 3.30705 0.14631 3.36166 2.73626 15 - -
49353 1.38629 1.38629 1.38629 1.38629
49354 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49355 16 0.15719 3.27118 2.73043 3.16274 16 - -
49356 1.38629 1.38629 1.38629 1.38629
49357 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49358 17 2.86982 3.47591 0.13017 3.36931 17 - -
49359 1.38629 1.38629 1.38629 1.38629
49360 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49361 18 2.97980 2.52563 3.03204 0.19727 18 - -
49362 1.38629 1.38629 1.38629 1.38629
49363 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49364 19 3.30705 0.14631 3.36166 2.73626 19 - -
49365 1.38629 1.38629 1.38629 1.38629
49366 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49367 20 2.86982 3.47591 0.13017 3.36931 20 - -
49368 1.38629 1.38629 1.38629 1.38629
49369 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49370 21 0.15719 3.27118 2.73043 3.16274 21 - -
49371 1.38629 1.38629 1.38629 1.38629
49372 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49373 22 2.86982 3.47591 0.13017 3.36931 22 - -
49374 1.38629 1.38629 1.38629 1.38629
49375 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49376 23 0.15719 3.27118 2.73043 3.16274 23 - -
49377 1.38629 1.38629 1.38629 1.38629
49378 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49379 24 2.10082 2.21882 0.69930 1.30206 24 - -
49380 1.38629 1.38629 1.38629 1.38629
49381 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49382 25 3.30705 0.14631 3.36166 2.73626 25 - -
49383 1.38629 1.38629 1.38629 1.38629
49384 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49385 26 0.15719 3.27118 2.73043 3.16274 26 - -
49386 1.38629 1.38629 1.38629 1.38629
49387 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49388 27 3.30705 0.14631 3.36166 2.73626 27 - -
49389 1.38629 1.38629 1.38629 1.38629
49390 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49391 28 3.30705 0.14631 3.36166 2.73626 28 - -
49392 1.38629 1.38629 1.38629 1.38629
49393 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49394 29 3.30705 0.14631 3.36166 2.73626 29 - -
49395 1.38629 1.38629 1.38629 1.38629
49396 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49397 30 2.86982 3.47591 0.13017 3.36931 30 - -
49398 1.38629 1.38629 1.38629 1.38629
49399 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49400 31 3.30705 0.14631 3.36166 2.73626 31 - -
49401 1.38629 1.38629 1.38629 1.38629
49402 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49403 32 2.97980 2.52563 3.03204 0.19727 32 - -
49404 1.38629 1.38629 1.38629 1.38629
49405 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49406 33 2.86982 3.47591 0.13017 3.36931 33 - -
49407 1.38629 1.38629 1.38629 1.38629
49408 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49409 34 0.15719 3.27118 2.73043 3.16274 34 - -
49410 1.38629 1.38629 1.38629 1.38629
49411 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49412 35 0.15719 3.27118 2.73043 3.16274 35 - -
49413 1.38629 1.38629 1.38629 1.38629
49414 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49415 36 3.30705 0.14631 3.36166 2.73626 36 - -
49416 1.38629 1.38629 1.38629 1.38629
49417 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49418 37 2.97980 2.52563 3.03204 0.19727 37 - -
49419 1.38629 1.38629 1.38629 1.38629
49420 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49421 38 2.97980 2.52563 3.03204 0.19727 38 - -
49422 1.38629 1.38629 1.38629 1.38629
49423 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49424 39 0.15719 3.27118 2.73043 3.16274 39 - -
49425 1.38629 1.38629 1.38629 1.38629
49426 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49427 40 0.15719 3.27118 2.73043 3.16274 40 - -
49428 1.38629 1.38629 1.38629 1.38629
49429 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49430 41 2.86982 3.47591 0.13017 3.36931 41 - -
49431 1.38629 1.38629 1.38629 1.38629
49432 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49433 42 3.30705 0.14631 3.36166 2.73626 42 - -
49434 1.38629 1.38629 1.38629 1.38629
49435 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49436 43 0.15719 3.27118 2.73043 3.16274 43 - -
49437 1.38629 1.38629 1.38629 1.38629
49438 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49439 44 2.97980 2.52563 3.03204 0.19727 44 - -
49440 1.38629 1.38629 1.38629 1.38629
49441 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49442 45 0.15719 3.27118 2.73043 3.16274 45 - -
49443 1.38629 1.38629 1.38629 1.38629
49444 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
49445 //
49446 HMMER3/b [3.0 | March 2010]
49447 NAME 4_LSU_Metazoa_4_LSU_start_thirtyone_long
49448 LENG 45
49449 ALPH DNA
49450 RF no
49451 CS no
49452 MAP yes
49453 DATE Mon Feb 27 23:02:10 2012
49454 NSEQ 51
49455 EFFN 4.622498
49456 CKSUM 1752002484
49457 STATS LOCAL MSV -6.8011 0.71932
49458 STATS LOCAL VITERBI -7.5797 0.71932
49459 STATS LOCAL FORWARD -4.2983 0.71932
49460 HMM A C G T
49461 m->m m->i m->d i->m i->i d->m d->d
49462 COMPO 1.19181 1.51829 1.65331 1.25236
49463 1.38629 1.38629 1.38629 1.38629
49464 0.02975 4.22281 4.22281 1.46634 0.26236 0.00000 *
49465 1 0.19872 3.21993 2.80686 2.52735 1 - -
49466 1.38629 1.38629 1.38629 1.38629
49467 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49468 2 0.10412 3.71958 3.02068 3.65469 2 - -
49469 1.38629 1.38629 1.38629 1.38629
49470 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49471 3 0.52708 2.23372 2.35113 1.57367 3 - -
49472 1.38629 1.38629 1.38629 1.38629
49473 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49474 4 3.34764 0.19756 3.40023 2.20060 4 - -
49475 1.38629 1.38629 1.38629 1.38629
49476 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49477 5 2.62740 0.91749 2.69659 0.77484 5 - -
49478 1.38629 1.38629 1.38629 1.38629
49479 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49480 6 0.10412 3.71958 3.02068 3.65469 6 - -
49481 1.38629 1.38629 1.38629 1.38629
49482 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49483 7 3.81741 0.09236 3.84929 3.10236 7 - -
49484 1.38629 1.38629 1.38629 1.38629
49485 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49486 8 3.81741 0.09236 3.84929 3.10236 8 - -
49487 1.38629 1.38629 1.38629 1.38629
49488 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49489 9 3.44540 2.82224 3.47956 0.13032 9 - -
49490 1.38629 1.38629 1.38629 1.38629
49491 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49492 10 3.17260 3.92002 0.08641 3.86101 10 - -
49493 1.38629 1.38629 1.38629 1.38629
49494 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49495 11 0.10412 3.71958 3.02068 3.65469 11 - -
49496 1.38629 1.38629 1.38629 1.38629
49497 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49498 12 1.58081 3.03038 0.36961 2.90245 12 - -
49499 1.38629 1.38629 1.38629 1.38629
49500 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49501 13 3.44540 2.82224 3.47956 0.13032 13 - -
49502 1.38629 1.38629 1.38629 1.38629
49503 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49504 14 3.25099 2.29289 3.29505 0.19453 14 - -
49505 1.38629 1.38629 1.38629 1.38629
49506 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49507 15 1.37291 2.90286 0.46354 2.76925 15 - -
49508 1.38629 1.38629 1.38629 1.38629
49509 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49510 16 1.81501 0.76028 1.42571 2.04569 16 - -
49511 1.38629 1.38629 1.38629 1.38629
49512 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49513 17 2.95426 3.45935 0.15725 2.78152 17 - -
49514 1.38629 1.38629 1.38629 1.38629
49515 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49516 18 3.44540 2.82224 3.47956 0.13032 18 - -
49517 1.38629 1.38629 1.38629 1.38629
49518 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49519 19 0.13688 3.59251 2.64970 3.51592 19 - -
49520 1.38629 1.38629 1.38629 1.38629
49521 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49522 20 3.44540 2.82224 3.47956 0.13032 20 - -
49523 1.38629 1.38629 1.38629 1.38629
49524 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49525 21 3.17260 3.92002 0.08641 3.86101 21 - -
49526 1.38629 1.38629 1.38629 1.38629
49527 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49528 22 0.10412 3.71958 3.02068 3.65469 22 - -
49529 1.38629 1.38629 1.38629 1.38629
49530 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49531 23 3.11442 1.99982 3.16489 0.25101 23 - -
49532 1.38629 1.38629 1.38629 1.38629
49533 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49534 24 3.26990 2.33740 3.31303 0.18753 24 - -
49535 1.38629 1.38629 1.38629 1.38629
49536 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49537 25 0.10412 3.71958 3.02068 3.65469 25 - -
49538 1.38629 1.38629 1.38629 1.38629
49539 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49540 26 3.81741 0.09236 3.84929 3.10236 26 - -
49541 1.38629 1.38629 1.38629 1.38629
49542 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49543 27 3.81741 0.09236 3.84929 3.10236 27 - -
49544 1.38629 1.38629 1.38629 1.38629
49545 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49546 28 3.44540 2.82224 3.47956 0.13032 28 - -
49547 1.38629 1.38629 1.38629 1.38629
49548 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49549 29 3.17260 3.92002 0.08641 3.86101 29 - -
49550 1.38629 1.38629 1.38629 1.38629
49551 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49552 30 3.81741 0.09236 3.84929 3.10236 30 - -
49553 1.38629 1.38629 1.38629 1.38629
49554 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49555 31 3.03541 1.84690 3.08928 0.28944 31 - -
49556 1.38629 1.38629 1.38629 1.38629
49557 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49558 32 3.17260 3.92002 0.08641 3.86101 32 - -
49559 1.38629 1.38629 1.38629 1.38629
49560 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49561 33 0.10412 3.71958 3.02068 3.65469 33 - -
49562 1.38629 1.38629 1.38629 1.38629
49563 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49564 34 0.10412 3.71958 3.02068 3.65469 34 - -
49565 1.38629 1.38629 1.38629 1.38629
49566 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49567 35 3.81741 0.09236 3.84929 3.10236 35 - -
49568 1.38629 1.38629 1.38629 1.38629
49569 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49570 36 3.44540 2.82224 3.47956 0.13032 36 - -
49571 1.38629 1.38629 1.38629 1.38629
49572 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49573 37 3.44540 2.82224 3.47956 0.13032 37 - -
49574 1.38629 1.38629 1.38629 1.38629
49575 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49576 38 0.10412 3.71958 3.02068 3.65469 38 - -
49577 1.38629 1.38629 1.38629 1.38629
49578 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49579 39 0.10412 3.71958 3.02068 3.65469 39 - -
49580 1.38629 1.38629 1.38629 1.38629
49581 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49582 40 3.17260 3.92002 0.08641 3.86101 40 - -
49583 1.38629 1.38629 1.38629 1.38629
49584 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49585 41 3.81741 0.09236 3.84929 3.10236 41 - -
49586 1.38629 1.38629 1.38629 1.38629
49587 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49588 42 0.10412 3.71958 3.02068 3.65469 42 - -
49589 1.38629 1.38629 1.38629 1.38629
49590 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49591 43 3.44540 2.82224 3.47956 0.13032 43 - -
49592 1.38629 1.38629 1.38629 1.38629
49593 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49594 44 0.10412 3.71958 3.02068 3.65469 44 - -
49595 1.38629 1.38629 1.38629 1.38629
49596 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547
49597 45 3.44540 2.82224 3.47956 0.13032 45 - -
49598 1.38629 1.38629 1.38629 1.38629
49599 0.01499 4.20804 * 1.46634 0.26236 0.00000 *
49600 //
49601 HMMER3/b [3.0 | March 2010]
49602 NAME 4_LSU_Metazoa_4_LSU_start_thirtyseven_long
49603 LENG 45
49604 ALPH DNA
49605 RF no
49606 CS no
49607 MAP yes
49608 DATE Wed Feb 29 11:37:02 2012
49609 NSEQ 3
49610 EFFN 3.000000
49611 CKSUM 2809097426
49612 STATS LOCAL MSV -8.0435 0.72039
49613 STATS LOCAL VITERBI -7.7252 0.72039
49614 STATS LOCAL FORWARD -4.0959 0.72039
49615 HMM A C G T
49616 m->m m->i m->d i->m i->i d->m d->d
49617 COMPO 1.40570 1.19945 1.38115 1.59871
49618 1.38629 1.38629 1.38629 1.38629
49619 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
49620 1 2.43088 1.34923 2.50068 0.56112 1 - -
49621 1.38629 1.38629 1.38629 1.38629
49622 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49623 2 2.97980 2.52563 3.03204 0.19727 2 - -
49624 1.38629 1.38629 1.38629 1.38629
49625 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49626 3 3.30705 0.14631 3.36166 2.73626 3 - -
49627 1.38629 1.38629 1.38629 1.38629
49628 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49629 4 3.30705 0.14631 3.36166 2.73626 4 - -
49630 1.38629 1.38629 1.38629 1.38629
49631 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49632 5 2.86982 3.47591 0.13017 3.36931 5 - -
49633 1.38629 1.38629 1.38629 1.38629
49634 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49635 6 0.15719 3.27118 2.73043 3.16274 6 - -
49636 1.38629 1.38629 1.38629 1.38629
49637 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49638 7 3.30705 0.14631 3.36166 2.73626 7 - -
49639 1.38629 1.38629 1.38629 1.38629
49640 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49641 8 3.30705 0.14631 3.36166 2.73626 8 - -
49642 1.38629 1.38629 1.38629 1.38629
49643 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49644 9 2.97980 2.52563 3.03204 0.19727 9 - -
49645 1.38629 1.38629 1.38629 1.38629
49646 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49647 10 3.30705 0.14631 3.36166 2.73626 10 - -
49648 1.38629 1.38629 1.38629 1.38629
49649 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49650 11 0.15719 3.27118 2.73043 3.16274 11 - -
49651 1.38629 1.38629 1.38629 1.38629
49652 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49653 12 2.86982 3.47591 0.13017 3.36931 12 - -
49654 1.38629 1.38629 1.38629 1.38629
49655 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49656 13 0.15719 3.27118 2.73043 3.16274 13 - -
49657 1.38629 1.38629 1.38629 1.38629
49658 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49659 14 2.97980 2.52563 3.03204 0.19727 14 - -
49660 1.38629 1.38629 1.38629 1.38629
49661 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49662 15 3.30705 0.14631 3.36166 2.73626 15 - -
49663 1.38629 1.38629 1.38629 1.38629
49664 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49665 16 0.15719 3.27118 2.73043 3.16274 16 - -
49666 1.38629 1.38629 1.38629 1.38629
49667 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49668 17 2.86982 3.47591 0.13017 3.36931 17 - -
49669 1.38629 1.38629 1.38629 1.38629
49670 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49671 18 2.86982 3.47591 0.13017 3.36931 18 - -
49672 1.38629 1.38629 1.38629 1.38629
49673 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49674 19 3.30705 0.14631 3.36166 2.73626 19 - -
49675 1.38629 1.38629 1.38629 1.38629
49676 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49677 20 2.86982 3.47591 0.13017 3.36931 20 - -
49678 1.38629 1.38629 1.38629 1.38629
49679 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49680 21 2.86982 3.47591 0.13017 3.36931 21 - -
49681 1.38629 1.38629 1.38629 1.38629
49682 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49683 22 2.86982 3.47591 0.13017 3.36931 22 - -
49684 1.38629 1.38629 1.38629 1.38629
49685 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49686 23 0.15719 3.27118 2.73043 3.16274 23 - -
49687 1.38629 1.38629 1.38629 1.38629
49688 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49689 24 3.30705 0.14631 3.36166 2.73626 24 - -
49690 1.38629 1.38629 1.38629 1.38629
49691 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49692 25 2.97980 2.52563 3.03204 0.19727 25 - -
49693 1.38629 1.38629 1.38629 1.38629
49694 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49695 26 0.15719 3.27118 2.73043 3.16274 26 - -
49696 1.38629 1.38629 1.38629 1.38629
49697 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49698 27 3.30705 0.14631 3.36166 2.73626 27 - -
49699 1.38629 1.38629 1.38629 1.38629
49700 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49701 28 3.30705 0.14631 3.36166 2.73626 28 - -
49702 1.38629 1.38629 1.38629 1.38629
49703 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49704 29 3.30705 0.14631 3.36166 2.73626 29 - -
49705 1.38629 1.38629 1.38629 1.38629
49706 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49707 30 2.86982 3.47591 0.13017 3.36931 30 - -
49708 1.38629 1.38629 1.38629 1.38629
49709 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49710 31 3.30705 0.14631 3.36166 2.73626 31 - -
49711 1.38629 1.38629 1.38629 1.38629
49712 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49713 32 3.30705 0.14631 3.36166 2.73626 32 - -
49714 1.38629 1.38629 1.38629 1.38629
49715 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49716 33 2.86982 3.47591 0.13017 3.36931 33 - -
49717 1.38629 1.38629 1.38629 1.38629
49718 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49719 34 2.86982 3.47591 0.13017 3.36931 34 - -
49720 1.38629 1.38629 1.38629 1.38629
49721 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49722 35 0.15719 3.27118 2.73043 3.16274 35 - -
49723 1.38629 1.38629 1.38629 1.38629
49724 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49725 36 2.97980 2.52563 3.03204 0.19727 36 - -
49726 1.38629 1.38629 1.38629 1.38629
49727 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49728 37 2.97980 2.52563 3.03204 0.19727 37 - -
49729 1.38629 1.38629 1.38629 1.38629
49730 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49731 38 2.97980 2.52563 3.03204 0.19727 38 - -
49732 1.38629 1.38629 1.38629 1.38629
49733 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49734 39 0.15719 3.27118 2.73043 3.16274 39 - -
49735 1.38629 1.38629 1.38629 1.38629
49736 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49737 40 0.15719 3.27118 2.73043 3.16274 40 - -
49738 1.38629 1.38629 1.38629 1.38629
49739 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49740 41 2.86982 3.47591 0.13017 3.36931 41 - -
49741 1.38629 1.38629 1.38629 1.38629
49742 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49743 42 3.30705 0.14631 3.36166 2.73626 42 - -
49744 1.38629 1.38629 1.38629 1.38629
49745 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49746 43 0.15719 3.27118 2.73043 3.16274 43 - -
49747 1.38629 1.38629 1.38629 1.38629
49748 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49749 44 2.97980 2.52563 3.03204 0.19727 44 - -
49750 1.38629 1.38629 1.38629 1.38629
49751 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49752 45 0.15719 3.27118 2.73043 3.16274 45 - -
49753 1.38629 1.38629 1.38629 1.38629
49754 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
49755 //
49756 HMMER3/b [3.0 | March 2010]
49757 NAME 4_LSU_Metazoa_4_LSU_start_thirtysix_long
49758 LENG 45
49759 ALPH DNA
49760 RF no
49761 CS no
49762 MAP yes
49763 DATE Wed Feb 29 11:36:51 2012
49764 NSEQ 2
49765 EFFN 2.000000
49766 CKSUM 2235696670
49767 STATS LOCAL MSV -7.6354 0.72842
49768 STATS LOCAL VITERBI -8.1785 0.72842
49769 STATS LOCAL FORWARD -3.4467 0.72842
49770 HMM A C G T
49771 m->m m->i m->d i->m i->i d->m d->d
49772 COMPO 1.23700 1.38378 1.42713 1.51815
49773 1.38629 1.38629 1.38629 1.38629
49774 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
49775 1 2.57915 2.25909 2.64442 0.28946 1 - -
49776 1.38629 1.38629 1.38629 1.38629
49777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49778 2 2.53331 3.02441 0.20344 2.88069 2 - -
49779 1.38629 1.38629 1.38629 1.38629
49780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49781 3 2.57915 2.25909 2.64442 0.28946 3 - -
49782 1.38629 1.38629 1.38629 1.38629
49783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49784 4 2.81865 0.23582 2.88868 2.35662 4 - -
49785 1.38629 1.38629 1.38629 1.38629
49786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49787 5 2.53331 3.02441 0.20344 2.88069 5 - -
49788 1.38629 1.38629 1.38629 1.38629
49789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49790 6 0.23862 2.84929 2.43386 2.70756 6 - -
49791 1.38629 1.38629 1.38629 1.38629
49792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49793 7 2.81865 0.23582 2.88868 2.35662 7 - -
49794 1.38629 1.38629 1.38629 1.38629
49795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49796 8 2.81865 0.23582 2.88868 2.35662 8 - -
49797 1.38629 1.38629 1.38629 1.38629
49798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49799 9 2.57915 2.25909 2.64442 0.28946 9 - -
49800 1.38629 1.38629 1.38629 1.38629
49801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49802 10 2.81865 0.23582 2.88868 2.35662 10 - -
49803 1.38629 1.38629 1.38629 1.38629
49804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49805 11 0.23862 2.84929 2.43386 2.70756 11 - -
49806 1.38629 1.38629 1.38629 1.38629
49807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49808 12 2.53331 3.02441 0.20344 2.88069 12 - -
49809 1.38629 1.38629 1.38629 1.38629
49810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49811 13 0.23862 2.84929 2.43386 2.70756 13 - -
49812 1.38629 1.38629 1.38629 1.38629
49813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49814 14 2.57915 2.25909 2.64442 0.28946 14 - -
49815 1.38629 1.38629 1.38629 1.38629
49816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49817 15 2.81865 0.23582 2.88868 2.35662 15 - -
49818 1.38629 1.38629 1.38629 1.38629
49819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49820 16 0.23862 2.84929 2.43386 2.70756 16 - -
49821 1.38629 1.38629 1.38629 1.38629
49822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49823 17 2.53331 3.02441 0.20344 2.88069 17 - -
49824 1.38629 1.38629 1.38629 1.38629
49825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49826 18 0.23862 2.84929 2.43386 2.70756 18 - -
49827 1.38629 1.38629 1.38629 1.38629
49828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49829 19 2.81865 0.23582 2.88868 2.35662 19 - -
49830 1.38629 1.38629 1.38629 1.38629
49831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49832 20 2.53331 3.02441 0.20344 2.88069 20 - -
49833 1.38629 1.38629 1.38629 1.38629
49834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49835 21 0.23862 2.84929 2.43386 2.70756 21 - -
49836 1.38629 1.38629 1.38629 1.38629
49837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49838 22 2.53331 3.02441 0.20344 2.88069 22 - -
49839 1.38629 1.38629 1.38629 1.38629
49840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49841 23 0.23862 2.84929 2.43386 2.70756 23 - -
49842 1.38629 1.38629 1.38629 1.38629
49843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49844 24 2.15554 1.00938 2.23102 0.88601 24 - -
49845 1.38629 1.38629 1.38629 1.38629
49846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49847 25 2.53331 3.02441 0.20344 2.88069 25 - -
49848 1.38629 1.38629 1.38629 1.38629
49849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49850 26 0.23862 2.84929 2.43386 2.70756 26 - -
49851 1.38629 1.38629 1.38629 1.38629
49852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49853 27 2.81865 0.23582 2.88868 2.35662 27 - -
49854 1.38629 1.38629 1.38629 1.38629
49855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49856 28 2.81865 0.23582 2.88868 2.35662 28 - -
49857 1.38629 1.38629 1.38629 1.38629
49858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49859 29 2.81865 0.23582 2.88868 2.35662 29 - -
49860 1.38629 1.38629 1.38629 1.38629
49861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49862 30 2.53331 3.02441 0.20344 2.88069 30 - -
49863 1.38629 1.38629 1.38629 1.38629
49864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49865 31 2.81865 0.23582 2.88868 2.35662 31 - -
49866 1.38629 1.38629 1.38629 1.38629
49867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49868 32 2.57915 2.25909 2.64442 0.28946 32 - -
49869 1.38629 1.38629 1.38629 1.38629
49870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49871 33 2.53331 3.02441 0.20344 2.88069 33 - -
49872 1.38629 1.38629 1.38629 1.38629
49873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49874 34 0.23862 2.84929 2.43386 2.70756 34 - -
49875 1.38629 1.38629 1.38629 1.38629
49876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49877 35 0.23862 2.84929 2.43386 2.70756 35 - -
49878 1.38629 1.38629 1.38629 1.38629
49879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49880 36 2.57915 2.25909 2.64442 0.28946 36 - -
49881 1.38629 1.38629 1.38629 1.38629
49882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49883 37 2.57915 2.25909 2.64442 0.28946 37 - -
49884 1.38629 1.38629 1.38629 1.38629
49885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49886 38 2.57915 2.25909 2.64442 0.28946 38 - -
49887 1.38629 1.38629 1.38629 1.38629
49888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49889 39 0.23862 2.84929 2.43386 2.70756 39 - -
49890 1.38629 1.38629 1.38629 1.38629
49891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49892 40 0.23862 2.84929 2.43386 2.70756 40 - -
49893 1.38629 1.38629 1.38629 1.38629
49894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49895 41 2.53331 3.02441 0.20344 2.88069 41 - -
49896 1.38629 1.38629 1.38629 1.38629
49897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49898 42 2.81865 0.23582 2.88868 2.35662 42 - -
49899 1.38629 1.38629 1.38629 1.38629
49900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49901 43 0.23862 2.84929 2.43386 2.70756 43 - -
49902 1.38629 1.38629 1.38629 1.38629
49903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49904 44 2.57915 2.25909 2.64442 0.28946 44 - -
49905 1.38629 1.38629 1.38629 1.38629
49906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
49907 45 0.23862 2.84929 2.43386 2.70756 45 - -
49908 1.38629 1.38629 1.38629 1.38629
49909 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
49910 //
49911 HMMER3/b [3.0 | March 2010]
49912 NAME 4_LSU_Metazoa_4_LSU_start_thirtythree_long
49913 LENG 45
49914 ALPH DNA
49915 RF no
49916 CS no
49917 MAP yes
49918 DATE Wed Feb 29 11:36:15 2012
49919 NSEQ 3
49920 EFFN 3.000000
49921 CKSUM 958365841
49922 STATS LOCAL MSV -7.9809 0.72073
49923 STATS LOCAL VITERBI -7.8947 0.72073
49924 STATS LOCAL FORWARD -4.3469 0.72073
49925 HMM A C G T
49926 m->m m->i m->d i->m i->i d->m d->d
49927 COMPO 1.33797 1.26045 1.48365 1.48154
49928 1.38629 1.38629 1.38629 1.38629
49929 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
49930 1 2.10082 2.21882 0.69930 1.30206 1 - -
49931 1.38629 1.38629 1.38629 1.38629
49932 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49933 2 3.30705 0.14631 3.36166 2.73626 2 - -
49934 1.38629 1.38629 1.38629 1.38629
49935 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49936 3 3.30705 0.14631 3.36166 2.73626 3 - -
49937 1.38629 1.38629 1.38629 1.38629
49938 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49939 4 2.97980 2.52563 3.03204 0.19727 4 - -
49940 1.38629 1.38629 1.38629 1.38629
49941 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49942 5 2.86982 3.47591 0.13017 3.36931 5 - -
49943 1.38629 1.38629 1.38629 1.38629
49944 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49945 6 0.15719 3.27118 2.73043 3.16274 6 - -
49946 1.38629 1.38629 1.38629 1.38629
49947 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49948 7 3.30705 0.14631 3.36166 2.73626 7 - -
49949 1.38629 1.38629 1.38629 1.38629
49950 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49951 8 3.30705 0.14631 3.36166 2.73626 8 - -
49952 1.38629 1.38629 1.38629 1.38629
49953 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49954 9 2.97980 2.52563 3.03204 0.19727 9 - -
49955 1.38629 1.38629 1.38629 1.38629
49956 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49957 10 3.30705 0.14631 3.36166 2.73626 10 - -
49958 1.38629 1.38629 1.38629 1.38629
49959 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49960 11 2.86982 3.47591 0.13017 3.36931 11 - -
49961 1.38629 1.38629 1.38629 1.38629
49962 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49963 12 2.86982 3.47591 0.13017 3.36931 12 - -
49964 1.38629 1.38629 1.38629 1.38629
49965 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49966 13 0.15719 3.27118 2.73043 3.16274 13 - -
49967 1.38629 1.38629 1.38629 1.38629
49968 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49969 14 2.97980 2.52563 3.03204 0.19727 14 - -
49970 1.38629 1.38629 1.38629 1.38629
49971 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49972 15 3.30705 0.14631 3.36166 2.73626 15 - -
49973 1.38629 1.38629 1.38629 1.38629
49974 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49975 16 0.15719 3.27118 2.73043 3.16274 16 - -
49976 1.38629 1.38629 1.38629 1.38629
49977 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49978 17 2.86982 3.47591 0.13017 3.36931 17 - -
49979 1.38629 1.38629 1.38629 1.38629
49980 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49981 18 0.15719 3.27118 2.73043 3.16274 18 - -
49982 1.38629 1.38629 1.38629 1.38629
49983 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49984 19 3.30705 0.14631 3.36166 2.73626 19 - -
49985 1.38629 1.38629 1.38629 1.38629
49986 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49987 20 2.86982 3.47591 0.13017 3.36931 20 - -
49988 1.38629 1.38629 1.38629 1.38629
49989 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49990 21 2.97980 2.52563 3.03204 0.19727 21 - -
49991 1.38629 1.38629 1.38629 1.38629
49992 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49993 22 2.86982 3.47591 0.13017 3.36931 22 - -
49994 1.38629 1.38629 1.38629 1.38629
49995 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49996 23 0.15719 3.27118 2.73043 3.16274 23 - -
49997 1.38629 1.38629 1.38629 1.38629
49998 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
49999 24 2.97980 2.52563 3.03204 0.19727 24 - -
50000 1.38629 1.38629 1.38629 1.38629
50001 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50002 25 2.97980 2.52563 3.03204 0.19727 25 - -
50003 1.38629 1.38629 1.38629 1.38629
50004 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50005 26 0.15719 3.27118 2.73043 3.16274 26 - -
50006 1.38629 1.38629 1.38629 1.38629
50007 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50008 27 3.30705 0.14631 3.36166 2.73626 27 - -
50009 1.38629 1.38629 1.38629 1.38629
50010 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50011 28 3.30705 0.14631 3.36166 2.73626 28 - -
50012 1.38629 1.38629 1.38629 1.38629
50013 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50014 29 3.30705 0.14631 3.36166 2.73626 29 - -
50015 1.38629 1.38629 1.38629 1.38629
50016 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50017 30 2.86982 3.47591 0.13017 3.36931 30 - -
50018 1.38629 1.38629 1.38629 1.38629
50019 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50020 31 3.30705 0.14631 3.36166 2.73626 31 - -
50021 1.38629 1.38629 1.38629 1.38629
50022 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50023 32 2.97980 2.52563 3.03204 0.19727 32 - -
50024 1.38629 1.38629 1.38629 1.38629
50025 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50026 33 2.86982 3.47591 0.13017 3.36931 33 - -
50027 1.38629 1.38629 1.38629 1.38629
50028 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50029 34 0.15719 3.27118 2.73043 3.16274 34 - -
50030 1.38629 1.38629 1.38629 1.38629
50031 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50032 35 0.15719 3.27118 2.73043 3.16274 35 - -
50033 1.38629 1.38629 1.38629 1.38629
50034 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50035 36 3.30705 0.14631 3.36166 2.73626 36 - -
50036 1.38629 1.38629 1.38629 1.38629
50037 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50038 37 2.97980 2.52563 3.03204 0.19727 37 - -
50039 1.38629 1.38629 1.38629 1.38629
50040 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50041 38 2.97980 2.52563 3.03204 0.19727 38 - -
50042 1.38629 1.38629 1.38629 1.38629
50043 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50044 39 0.15719 3.27118 2.73043 3.16274 39 - -
50045 1.38629 1.38629 1.38629 1.38629
50046 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50047 40 0.15719 3.27118 2.73043 3.16274 40 - -
50048 1.38629 1.38629 1.38629 1.38629
50049 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50050 41 2.86982 3.47591 0.13017 3.36931 41 - -
50051 1.38629 1.38629 1.38629 1.38629
50052 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50053 42 3.30705 0.14631 3.36166 2.73626 42 - -
50054 1.38629 1.38629 1.38629 1.38629
50055 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50056 43 0.15719 3.27118 2.73043 3.16274 43 - -
50057 1.38629 1.38629 1.38629 1.38629
50058 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50059 44 2.97980 2.52563 3.03204 0.19727 44 - -
50060 1.38629 1.38629 1.38629 1.38629
50061 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50062 45 0.15719 3.27118 2.73043 3.16274 45 - -
50063 1.38629 1.38629 1.38629 1.38629
50064 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
50065 //
50066 HMMER3/b [3.0 | March 2010]
50067 NAME 4_LSU_Metazoa_4_LSU_start_thirtytwo_long
50068 LENG 45
50069 ALPH DNA
50070 RF no
50071 CS no
50072 MAP yes
50073 DATE Mon Feb 27 23:02:19 2012
50074 NSEQ 21
50075 EFFN 3.776001
50076 CKSUM 3781066606
50077 STATS LOCAL MSV -7.4789 0.71932
50078 STATS LOCAL VITERBI -7.7461 0.71932
50079 STATS LOCAL FORWARD -4.0252 0.71932
50080 HMM A C G T
50081 m->m m->i m->d i->m i->i d->m d->d
50082 COMPO 1.21030 1.50966 1.52784 1.33217
50083 1.38629 1.38629 1.38629 1.38629
50084 0.03404 4.09034 4.09034 1.46634 0.26236 0.00000 *
50085 1 3.04959 0.25511 3.11054 2.01578 1 - -
50086 1.38629 1.38629 1.38629 1.38629
50087 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50088 2 3.03936 3.72263 0.10341 3.64171 2 - -
50089 1.38629 1.38629 1.38629 1.38629
50090 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50091 3 3.22677 2.68279 3.26956 0.15792 3 - -
50092 1.38629 1.38629 1.38629 1.38629
50093 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50094 4 3.03936 3.72263 0.10341 3.64171 4 - -
50095 1.38629 1.38629 1.38629 1.38629
50096 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50097 5 3.22677 2.68279 3.26956 0.15792 5 - -
50098 1.38629 1.38629 1.38629 1.38629
50099 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50100 6 0.12532 3.51501 2.88885 3.42972 6 - -
50101 1.38629 1.38629 1.38629 1.38629
50102 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50103 7 3.22677 2.68279 3.26956 0.15792 7 - -
50104 1.38629 1.38629 1.38629 1.38629
50105 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50106 8 3.58758 0.11320 3.63024 2.94018 8 - -
50107 1.38629 1.38629 1.38629 1.38629
50108 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50109 9 3.22677 2.68279 3.26956 0.15792 9 - -
50110 1.38629 1.38629 1.38629 1.38629
50111 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50112 10 3.03936 3.72263 0.10341 3.64171 10 - -
50113 1.38629 1.38629 1.38629 1.38629
50114 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50115 11 0.12532 3.51501 2.88885 3.42972 11 - -
50116 1.38629 1.38629 1.38629 1.38629
50117 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50118 12 0.12532 3.51501 2.88885 3.42972 12 - -
50119 1.38629 1.38629 1.38629 1.38629
50120 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50121 13 0.26222 2.34874 2.60935 2.78736 13 - -
50122 1.38629 1.38629 1.38629 1.38629
50123 0.13370 4.09034 2.22184 1.46634 0.26236 1.09861 0.40547
50124 14 3.05768 2.57545 3.10701 0.18374 14 - -
50125 1.38629 1.38629 1.38629 1.38629
50126 0.03754 3.99418 3.99418 1.46634 0.26236 0.26904 1.44439
50127 15 3.58758 0.11320 3.63024 2.94018 15 - -
50128 1.38629 1.38629 1.38629 1.38629
50129 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50130 16 0.12532 3.51501 2.88885 3.42972 16 - -
50131 1.38629 1.38629 1.38629 1.38629
50132 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50133 17 0.12532 3.51501 2.88885 3.42972 17 - -
50134 1.38629 1.38629 1.38629 1.38629
50135 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50136 18 3.03936 3.72263 0.10341 3.64171 18 - -
50137 1.38629 1.38629 1.38629 1.38629
50138 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50139 19 3.22677 2.68279 3.26956 0.15792 19 - -
50140 1.38629 1.38629 1.38629 1.38629
50141 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50142 20 3.03936 3.72263 0.10341 3.64171 20 - -
50143 1.38629 1.38629 1.38629 1.38629
50144 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50145 21 3.22677 2.68279 3.26956 0.15792 21 - -
50146 1.38629 1.38629 1.38629 1.38629
50147 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50148 22 3.03936 3.72263 0.10341 3.64171 22 - -
50149 1.38629 1.38629 1.38629 1.38629
50150 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50151 23 0.19599 3.15137 2.72843 2.66121 23 - -
50152 1.38629 1.38629 1.38629 1.38629
50153 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50154 24 2.05503 1.13744 1.58476 1.06052 24 - -
50155 1.38629 1.38629 1.38629 1.38629
50156 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50157 25 2.03102 2.66968 0.38075 2.15267 25 - -
50158 1.38629 1.38629 1.38629 1.38629
50159 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50160 26 0.12532 3.51501 2.88885 3.42972 26 - -
50161 1.38629 1.38629 1.38629 1.38629
50162 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50163 27 3.58758 0.11320 3.63024 2.94018 27 - -
50164 1.38629 1.38629 1.38629 1.38629
50165 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50166 28 3.58758 0.11320 3.63024 2.94018 28 - -
50167 1.38629 1.38629 1.38629 1.38629
50168 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50169 29 3.58758 0.11320 3.63024 2.94018 29 - -
50170 1.38629 1.38629 1.38629 1.38629
50171 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50172 30 3.58758 0.11320 3.63024 2.94018 30 - -
50173 1.38629 1.38629 1.38629 1.38629
50174 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50175 31 3.58758 0.11320 3.63024 2.94018 31 - -
50176 1.38629 1.38629 1.38629 1.38629
50177 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50178 32 3.22677 2.68279 3.26956 0.15792 32 - -
50179 1.38629 1.38629 1.38629 1.38629
50180 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50181 33 3.03936 3.72263 0.10341 3.64171 33 - -
50182 1.38629 1.38629 1.38629 1.38629
50183 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50184 34 0.12532 3.51501 2.88885 3.42972 34 - -
50185 1.38629 1.38629 1.38629 1.38629
50186 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50187 35 0.12532 3.51501 2.88885 3.42972 35 - -
50188 1.38629 1.38629 1.38629 1.38629
50189 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50190 36 3.22677 2.68279 3.26956 0.15792 36 - -
50191 1.38629 1.38629 1.38629 1.38629
50192 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50193 37 3.22677 2.68279 3.26956 0.15792 37 - -
50194 1.38629 1.38629 1.38629 1.38629
50195 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50196 38 3.22677 2.68279 3.26956 0.15792 38 - -
50197 1.38629 1.38629 1.38629 1.38629
50198 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50199 39 0.12532 3.51501 2.88885 3.42972 39 - -
50200 1.38629 1.38629 1.38629 1.38629
50201 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50202 40 0.12532 3.51501 2.88885 3.42972 40 - -
50203 1.38629 1.38629 1.38629 1.38629
50204 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50205 41 3.03936 3.72263 0.10341 3.64171 41 - -
50206 1.38629 1.38629 1.38629 1.38629
50207 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50208 42 3.58758 0.11320 3.63024 2.94018 42 - -
50209 1.38629 1.38629 1.38629 1.38629
50210 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50211 43 0.12532 3.51501 2.88885 3.42972 43 - -
50212 1.38629 1.38629 1.38629 1.38629
50213 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50214 44 3.22677 2.68279 3.26956 0.15792 44 - -
50215 1.38629 1.38629 1.38629 1.38629
50216 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547
50217 45 0.12532 3.51501 2.88885 3.42972 45 - -
50218 1.38629 1.38629 1.38629 1.38629
50219 0.01716 4.07346 * 1.46634 0.26236 0.00000 *
50220 //
50221 HMMER3/b [3.0 | March 2010]
50222 NAME 4_LSU_Metazoa_4_LSU_start_three_long
50223 LENG 45
50224 ALPH DNA
50225 RF no
50226 CS no
50227 MAP yes
50228 DATE Mon Feb 27 22:49:43 2012
50229 NSEQ 10
50230 EFFN 3.334961
50231 CKSUM 2758523613
50232 STATS LOCAL MSV -8.2143 0.71933
50233 STATS LOCAL VITERBI -7.5430 0.71933
50234 STATS LOCAL FORWARD -3.9363 0.71933
50235 HMM A C G T
50236 m->m m->i m->d i->m i->i d->m d->d
50237 COMPO 1.23872 1.25886 1.59600 1.49807
50238 1.38629 1.38629 1.38629 1.38629
50239 0.03680 4.01367 4.01367 1.46634 0.26236 0.00000 *
50240 1 3.09257 2.59766 3.14057 0.17804 1 - -
50241 1.38629 1.38629 1.38629 1.38629
50242 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50243 2 3.43763 0.12967 3.48690 2.83229 2 - -
50244 1.38629 1.38629 1.38629 1.38629
50245 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50246 3 3.09257 2.59766 3.14057 0.17804 3 - -
50247 1.38629 1.38629 1.38629 1.38629
50248 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50249 4 3.43763 0.12967 3.48690 2.83229 4 - -
50250 1.38629 1.38629 1.38629 1.38629
50251 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50252 5 2.95026 3.59174 0.11672 3.49682 5 - -
50253 1.38629 1.38629 1.38629 1.38629
50254 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50255 6 0.14138 3.38419 2.80447 3.28622 6 - -
50256 1.38629 1.38629 1.38629 1.38629
50257 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50258 7 3.43763 0.12967 3.48690 2.83229 7 - -
50259 1.38629 1.38629 1.38629 1.38629
50260 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50261 8 3.43763 0.12967 3.48690 2.83229 8 - -
50262 1.38629 1.38629 1.38629 1.38629
50263 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50264 9 3.09257 2.59766 3.14057 0.17804 9 - -
50265 1.38629 1.38629 1.38629 1.38629
50266 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50267 10 3.43763 0.12967 3.48690 2.83229 10 - -
50268 1.38629 1.38629 1.38629 1.38629
50269 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50270 11 0.14138 3.38419 2.80447 3.28622 11 - -
50271 1.38629 1.38629 1.38629 1.38629
50272 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50273 12 2.95026 3.59174 0.11672 3.49682 12 - -
50274 1.38629 1.38629 1.38629 1.38629
50275 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50276 13 0.14138 3.38419 2.80447 3.28622 13 - -
50277 1.38629 1.38629 1.38629 1.38629
50278 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50279 14 3.09257 2.59766 3.14057 0.17804 14 - -
50280 1.38629 1.38629 1.38629 1.38629
50281 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50282 15 3.43763 0.12967 3.48690 2.83229 15 - -
50283 1.38629 1.38629 1.38629 1.38629
50284 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50285 16 0.14138 3.38419 2.80447 3.28622 16 - -
50286 1.38629 1.38629 1.38629 1.38629
50287 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50288 17 2.95026 3.59174 0.11672 3.49682 17 - -
50289 1.38629 1.38629 1.38629 1.38629
50290 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50291 18 0.46629 2.68077 1.48912 2.54345 18 - -
50292 1.38629 1.38629 1.38629 1.38629
50293 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50294 19 3.43763 0.12967 3.48690 2.83229 19 - -
50295 1.38629 1.38629 1.38629 1.38629
50296 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50297 20 0.14138 3.38419 2.80447 3.28622 20 - -
50298 1.38629 1.38629 1.38629 1.38629
50299 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50300 21 0.14138 3.38419 2.80447 3.28622 21 - -
50301 1.38629 1.38629 1.38629 1.38629
50302 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50303 22 2.95026 3.59174 0.11672 3.49682 22 - -
50304 1.38629 1.38629 1.38629 1.38629
50305 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50306 23 2.95026 3.59174 0.11672 3.49682 23 - -
50307 1.38629 1.38629 1.38629 1.38629
50308 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50309 24 3.43763 0.12967 3.48690 2.83229 24 - -
50310 1.38629 1.38629 1.38629 1.38629
50311 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50312 25 3.09257 2.59766 3.14057 0.17804 25 - -
50313 1.38629 1.38629 1.38629 1.38629
50314 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50315 26 0.14138 3.38419 2.80447 3.28622 26 - -
50316 1.38629 1.38629 1.38629 1.38629
50317 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50318 27 3.43763 0.12967 3.48690 2.83229 27 - -
50319 1.38629 1.38629 1.38629 1.38629
50320 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50321 28 3.43763 0.12967 3.48690 2.83229 28 - -
50322 1.38629 1.38629 1.38629 1.38629
50323 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50324 29 3.43763 0.12967 3.48690 2.83229 29 - -
50325 1.38629 1.38629 1.38629 1.38629
50326 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50327 30 2.95026 3.59174 0.11672 3.49682 30 - -
50328 1.38629 1.38629 1.38629 1.38629
50329 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50330 31 3.43763 0.12967 3.48690 2.83229 31 - -
50331 1.38629 1.38629 1.38629 1.38629
50332 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50333 32 3.09257 2.59766 3.14057 0.17804 32 - -
50334 1.38629 1.38629 1.38629 1.38629
50335 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50336 33 2.95026 3.59174 0.11672 3.49682 33 - -
50337 1.38629 1.38629 1.38629 1.38629
50338 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50339 34 0.14138 3.38419 2.80447 3.28622 34 - -
50340 1.38629 1.38629 1.38629 1.38629
50341 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50342 35 0.14138 3.38419 2.80447 3.28622 35 - -
50343 1.38629 1.38629 1.38629 1.38629
50344 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50345 36 3.09257 2.59766 3.14057 0.17804 36 - -
50346 1.38629 1.38629 1.38629 1.38629
50347 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50348 37 3.09257 2.59766 3.14057 0.17804 37 - -
50349 1.38629 1.38629 1.38629 1.38629
50350 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50351 38 3.09257 2.59766 3.14057 0.17804 38 - -
50352 1.38629 1.38629 1.38629 1.38629
50353 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50354 39 0.14138 3.38419 2.80447 3.28622 39 - -
50355 1.38629 1.38629 1.38629 1.38629
50356 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50357 40 0.14138 3.38419 2.80447 3.28622 40 - -
50358 1.38629 1.38629 1.38629 1.38629
50359 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50360 41 2.95026 3.59174 0.11672 3.49682 41 - -
50361 1.38629 1.38629 1.38629 1.38629
50362 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50363 42 3.43763 0.12967 3.48690 2.83229 42 - -
50364 1.38629 1.38629 1.38629 1.38629
50365 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50366 43 0.14138 3.38419 2.80447 3.28622 43 - -
50367 1.38629 1.38629 1.38629 1.38629
50368 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50369 44 3.09257 2.59766 3.14057 0.17804 44 - -
50370 1.38629 1.38629 1.38629 1.38629
50371 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547
50372 45 0.14138 3.38419 2.80447 3.28622 45 - -
50373 1.38629 1.38629 1.38629 1.38629
50374 0.01857 3.99544 * 1.46634 0.26236 0.00000 *
50375 //
50376 HMMER3/b [3.0 | March 2010]
50377 NAME 4_LSU_Metazoa_4_LSU_start_twelve_long
50378 LENG 45
50379 ALPH DNA
50380 RF no
50381 CS no
50382 MAP yes
50383 DATE Mon Feb 27 22:57:34 2012
50384 NSEQ 3
50385 EFFN 3.000000
50386 CKSUM 869730097
50387 STATS LOCAL MSV -8.0534 0.72127
50388 STATS LOCAL VITERBI -7.7876 0.72127
50389 STATS LOCAL FORWARD -3.9200 0.72127
50390 HMM A C G T
50391 m->m m->i m->d i->m i->i d->m d->d
50392 COMPO 1.20477 1.36989 1.62908 1.38632
50393 1.38629 1.38629 1.38629 1.38629
50394 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
50395 1 0.15719 3.27118 2.73043 3.16274 1 - -
50396 1.38629 1.38629 1.38629 1.38629
50397 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50398 2 2.97980 2.52563 3.03204 0.19727 2 - -
50399 1.38629 1.38629 1.38629 1.38629
50400 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50401 3 2.97980 2.52563 3.03204 0.19727 3 - -
50402 1.38629 1.38629 1.38629 1.38629
50403 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50404 4 2.97980 2.52563 3.03204 0.19727 4 - -
50405 1.38629 1.38629 1.38629 1.38629
50406 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50407 5 2.86982 3.47591 0.13017 3.36931 5 - -
50408 1.38629 1.38629 1.38629 1.38629
50409 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50410 6 0.15719 3.27118 2.73043 3.16274 6 - -
50411 1.38629 1.38629 1.38629 1.38629
50412 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50413 7 3.30705 0.14631 3.36166 2.73626 7 - -
50414 1.38629 1.38629 1.38629 1.38629
50415 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50416 8 3.30705 0.14631 3.36166 2.73626 8 - -
50417 1.38629 1.38629 1.38629 1.38629
50418 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50419 9 2.97980 2.52563 3.03204 0.19727 9 - -
50420 1.38629 1.38629 1.38629 1.38629
50421 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50422 10 3.30705 0.14631 3.36166 2.73626 10 - -
50423 1.38629 1.38629 1.38629 1.38629
50424 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50425 11 0.15719 3.27118 2.73043 3.16274 11 - -
50426 1.38629 1.38629 1.38629 1.38629
50427 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50428 12 1.33622 2.58417 0.55423 2.43967 12 - -
50429 1.38629 1.38629 1.38629 1.38629
50430 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50431 13 3.30705 0.14631 3.36166 2.73626 13 - -
50432 1.38629 1.38629 1.38629 1.38629
50433 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50434 14 2.97980 2.52563 3.03204 0.19727 14 - -
50435 1.38629 1.38629 1.38629 1.38629
50436 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50437 15 3.30705 0.14631 3.36166 2.73626 15 - -
50438 1.38629 1.38629 1.38629 1.38629
50439 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50440 16 0.15719 3.27118 2.73043 3.16274 16 - -
50441 1.38629 1.38629 1.38629 1.38629
50442 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50443 17 2.86982 3.47591 0.13017 3.36931 17 - -
50444 1.38629 1.38629 1.38629 1.38629
50445 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50446 18 2.86982 3.47591 0.13017 3.36931 18 - -
50447 1.38629 1.38629 1.38629 1.38629
50448 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50449 19 3.30705 0.14631 3.36166 2.73626 19 - -
50450 1.38629 1.38629 1.38629 1.38629
50451 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50452 20 0.15719 3.27118 2.73043 3.16274 20 - -
50453 1.38629 1.38629 1.38629 1.38629
50454 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50455 21 0.15719 3.27118 2.73043 3.16274 21 - -
50456 1.38629 1.38629 1.38629 1.38629
50457 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50458 22 2.86982 3.47591 0.13017 3.36931 22 - -
50459 1.38629 1.38629 1.38629 1.38629
50460 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50461 23 0.15719 3.27118 2.73043 3.16274 23 - -
50462 1.38629 1.38629 1.38629 1.38629
50463 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50464 24 2.42752 1.34012 2.49742 0.56628 24 - -
50465 1.38629 1.38629 1.38629 1.38629
50466 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50467 25 2.97980 2.52563 3.03204 0.19727 25 - -
50468 1.38629 1.38629 1.38629 1.38629
50469 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50470 26 0.15719 3.27118 2.73043 3.16274 26 - -
50471 1.38629 1.38629 1.38629 1.38629
50472 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50473 27 3.30705 0.14631 3.36166 2.73626 27 - -
50474 1.38629 1.38629 1.38629 1.38629
50475 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50476 28 2.86982 3.47591 0.13017 3.36931 28 - -
50477 1.38629 1.38629 1.38629 1.38629
50478 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50479 29 3.30705 0.14631 3.36166 2.73626 29 - -
50480 1.38629 1.38629 1.38629 1.38629
50481 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50482 30 2.97980 2.52563 3.03204 0.19727 30 - -
50483 1.38629 1.38629 1.38629 1.38629
50484 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50485 31 3.30705 0.14631 3.36166 2.73626 31 - -
50486 1.38629 1.38629 1.38629 1.38629
50487 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50488 32 2.97980 2.52563 3.03204 0.19727 32 - -
50489 1.38629 1.38629 1.38629 1.38629
50490 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50491 33 2.86982 3.47591 0.13017 3.36931 33 - -
50492 1.38629 1.38629 1.38629 1.38629
50493 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50494 34 0.15719 3.27118 2.73043 3.16274 34 - -
50495 1.38629 1.38629 1.38629 1.38629
50496 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50497 35 0.15719 3.27118 2.73043 3.16274 35 - -
50498 1.38629 1.38629 1.38629 1.38629
50499 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50500 36 3.30705 0.14631 3.36166 2.73626 36 - -
50501 1.38629 1.38629 1.38629 1.38629
50502 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50503 37 2.97980 2.52563 3.03204 0.19727 37 - -
50504 1.38629 1.38629 1.38629 1.38629
50505 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50506 38 2.97980 2.52563 3.03204 0.19727 38 - -
50507 1.38629 1.38629 1.38629 1.38629
50508 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50509 39 0.15719 3.27118 2.73043 3.16274 39 - -
50510 1.38629 1.38629 1.38629 1.38629
50511 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50512 40 0.15719 3.27118 2.73043 3.16274 40 - -
50513 1.38629 1.38629 1.38629 1.38629
50514 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50515 41 2.86982 3.47591 0.13017 3.36931 41 - -
50516 1.38629 1.38629 1.38629 1.38629
50517 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50518 42 3.30705 0.14631 3.36166 2.73626 42 - -
50519 1.38629 1.38629 1.38629 1.38629
50520 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50521 43 0.15719 3.27118 2.73043 3.16274 43 - -
50522 1.38629 1.38629 1.38629 1.38629
50523 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50524 44 2.97980 2.52563 3.03204 0.19727 44 - -
50525 1.38629 1.38629 1.38629 1.38629
50526 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50527 45 0.15719 3.27118 2.73043 3.16274 45 - -
50528 1.38629 1.38629 1.38629 1.38629
50529 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
50530 //
50531 HMMER3/b [3.0 | March 2010]
50532 NAME 4_LSU_Metazoa_4_LSU_start_twenty_long
50533 LENG 45
50534 ALPH DNA
50535 RF no
50536 CS no
50537 MAP yes
50538 DATE Mon Feb 27 22:59:47 2012
50539 NSEQ 10
50540 EFFN 3.637695
50541 CKSUM 2656717971
50542 STATS LOCAL MSV -7.6590 0.71931
50543 STATS LOCAL VITERBI -7.6396 0.71931
50544 STATS LOCAL FORWARD -4.2587 0.71931
50545 HMM A C G T
50546 m->m m->i m->d i->m i->i d->m d->d
50547 COMPO 1.26274 1.30948 1.45746 1.54022
50548 1.38629 1.38629 1.38629 1.38629
50549 0.03486 4.06692 4.06692 1.46634 0.26236 0.00000 *
50550 1 2.56791 0.56820 2.63886 1.25414 1 - -
50551 1.38629 1.38629 1.38629 1.38629
50552 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50553 2 2.21210 0.29506 2.81793 2.44976 2 - -
50554 1.38629 1.38629 1.38629 1.38629
50555 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50556 3 3.18633 2.65716 3.23071 0.16370 3 - -
50557 1.38629 1.38629 1.38629 1.38629
50558 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50559 4 3.01320 3.68399 0.10715 3.59886 4 - -
50560 1.38629 1.38629 1.38629 1.38629
50561 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50562 5 0.12988 3.47601 2.86379 3.38690 5 - -
50563 1.38629 1.38629 1.38629 1.38629
50564 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50565 6 0.12988 3.47601 2.86379 3.38690 6 - -
50566 1.38629 1.38629 1.38629 1.38629
50567 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50568 7 2.76060 0.38841 2.82828 1.61194 7 - -
50569 1.38629 1.38629 1.38629 1.38629
50570 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50571 8 3.54307 0.11783 3.58773 2.90838 8 - -
50572 1.38629 1.38629 1.38629 1.38629
50573 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50574 9 3.18633 2.65716 3.23071 0.16370 9 - -
50575 1.38629 1.38629 1.38629 1.38629
50576 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50577 10 3.54307 0.11783 3.58773 2.90838 10 - -
50578 1.38629 1.38629 1.38629 1.38629
50579 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50580 11 0.12988 3.47601 2.86379 3.38690 11 - -
50581 1.38629 1.38629 1.38629 1.38629
50582 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50583 12 3.01320 3.68399 0.10715 3.59886 12 - -
50584 1.38629 1.38629 1.38629 1.38629
50585 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50586 13 0.12988 3.47601 2.86379 3.38690 13 - -
50587 1.38629 1.38629 1.38629 1.38629
50588 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50589 14 3.18633 2.65716 3.23071 0.16370 14 - -
50590 1.38629 1.38629 1.38629 1.38629
50591 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50592 15 3.54307 0.11783 3.58773 2.90838 15 - -
50593 1.38629 1.38629 1.38629 1.38629
50594 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50595 16 0.12988 3.47601 2.86379 3.38690 16 - -
50596 1.38629 1.38629 1.38629 1.38629
50597 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50598 17 3.01320 3.68399 0.10715 3.59886 17 - -
50599 1.38629 1.38629 1.38629 1.38629
50600 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50601 18 3.01320 3.68399 0.10715 3.59886 18 - -
50602 1.38629 1.38629 1.38629 1.38629
50603 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50604 19 3.54307 0.11783 3.58773 2.90838 19 - -
50605 1.38629 1.38629 1.38629 1.38629
50606 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50607 20 3.01320 3.68399 0.10715 3.59886 20 - -
50608 1.38629 1.38629 1.38629 1.38629
50609 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50610 21 1.76831 2.95823 0.33081 2.82808 21 - -
50611 1.38629 1.38629 1.38629 1.38629
50612 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50613 22 3.01320 3.68399 0.10715 3.59886 22 - -
50614 1.38629 1.38629 1.38629 1.38629
50615 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50616 23 0.23339 3.13290 2.15597 3.02062 23 - -
50617 1.38629 1.38629 1.38629 1.38629
50618 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50619 24 3.18633 2.65716 3.23071 0.16370 24 - -
50620 1.38629 1.38629 1.38629 1.38629
50621 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50622 25 3.54307 0.11783 3.58773 2.90838 25 - -
50623 1.38629 1.38629 1.38629 1.38629
50624 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50625 26 0.12988 3.47601 2.86379 3.38690 26 - -
50626 1.38629 1.38629 1.38629 1.38629
50627 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50628 27 3.54307 0.11783 3.58773 2.90838 27 - -
50629 1.38629 1.38629 1.38629 1.38629
50630 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50631 28 3.54307 0.11783 3.58773 2.90838 28 - -
50632 1.38629 1.38629 1.38629 1.38629
50633 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50634 29 3.54307 0.11783 3.58773 2.90838 29 - -
50635 1.38629 1.38629 1.38629 1.38629
50636 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50637 30 3.01320 3.68399 0.10715 3.59886 30 - -
50638 1.38629 1.38629 1.38629 1.38629
50639 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50640 31 3.54307 0.11783 3.58773 2.90838 31 - -
50641 1.38629 1.38629 1.38629 1.38629
50642 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50643 32 3.18633 2.65716 3.23071 0.16370 32 - -
50644 1.38629 1.38629 1.38629 1.38629
50645 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50646 33 3.01320 3.68399 0.10715 3.59886 33 - -
50647 1.38629 1.38629 1.38629 1.38629
50648 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50649 34 0.12988 3.47601 2.86379 3.38690 34 - -
50650 1.38629 1.38629 1.38629 1.38629
50651 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50652 35 0.12988 3.47601 2.86379 3.38690 35 - -
50653 1.38629 1.38629 1.38629 1.38629
50654 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50655 36 3.18633 2.65716 3.23071 0.16370 36 - -
50656 1.38629 1.38629 1.38629 1.38629
50657 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50658 37 3.18633 2.65716 3.23071 0.16370 37 - -
50659 1.38629 1.38629 1.38629 1.38629
50660 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50661 38 3.18633 2.65716 3.23071 0.16370 38 - -
50662 1.38629 1.38629 1.38629 1.38629
50663 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50664 39 0.12988 3.47601 2.86379 3.38690 39 - -
50665 1.38629 1.38629 1.38629 1.38629
50666 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50667 40 0.12988 3.47601 2.86379 3.38690 40 - -
50668 1.38629 1.38629 1.38629 1.38629
50669 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50670 41 3.01320 3.68399 0.10715 3.59886 41 - -
50671 1.38629 1.38629 1.38629 1.38629
50672 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50673 42 3.54307 0.11783 3.58773 2.90838 42 - -
50674 1.38629 1.38629 1.38629 1.38629
50675 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50676 43 0.12988 3.47601 2.86379 3.38690 43 - -
50677 1.38629 1.38629 1.38629 1.38629
50678 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50679 44 3.18633 2.65716 3.23071 0.16370 44 - -
50680 1.38629 1.38629 1.38629 1.38629
50681 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547
50682 45 0.12988 3.47601 2.86379 3.38690 45 - -
50683 1.38629 1.38629 1.38629 1.38629
50684 0.01758 4.04964 * 1.46634 0.26236 0.00000 *
50685 //
50686 HMMER3/b [3.0 | March 2010]
50687 NAME 4_LSU_Metazoa_4_LSU_start_twentyeight_long
50688 LENG 45
50689 ALPH DNA
50690 RF no
50691 CS no
50692 MAP yes
50693 DATE Mon Feb 27 23:01:50 2012
50694 NSEQ 5
50695 EFFN 3.168945
50696 CKSUM 1327797524
50697 STATS LOCAL MSV -8.0678 0.71932
50698 STATS LOCAL VITERBI -7.6682 0.71932
50699 STATS LOCAL FORWARD -3.5455 0.71932
50700 HMM A C G T
50701 m->m m->i m->d i->m i->i d->m d->d
50702 COMPO 1.41226 1.10325 1.45485 1.65452
50703 1.38629 1.38629 1.38629 1.38629
50704 0.03796 3.98322 3.98322 1.46634 0.26236 0.00000 *
50705 1 2.91196 3.53626 0.12295 3.43565 1 - -
50706 1.38629 1.38629 1.38629 1.38629
50707 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50708 2 3.03791 2.56284 3.08799 0.18707 2 - -
50709 1.38629 1.38629 1.38629 1.38629
50710 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50711 3 3.37482 0.13738 3.42671 2.78637 3 - -
50712 1.38629 1.38629 1.38629 1.38629
50713 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50714 4 2.91196 3.53626 0.12295 3.43565 4 - -
50715 1.38629 1.38629 1.38629 1.38629
50716 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50717 5 2.91196 3.53626 0.12295 3.43565 5 - -
50718 1.38629 1.38629 1.38629 1.38629
50719 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50720 6 0.14875 3.32976 2.76899 3.22669 6 - -
50721 1.38629 1.38629 1.38629 1.38629
50722 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50723 7 3.37482 0.13738 3.42671 2.78637 7 - -
50724 1.38629 1.38629 1.38629 1.38629
50725 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50726 8 3.37482 0.13738 3.42671 2.78637 8 - -
50727 1.38629 1.38629 1.38629 1.38629
50728 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50729 9 3.03791 2.56284 3.08799 0.18707 9 - -
50730 1.38629 1.38629 1.38629 1.38629
50731 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50732 10 3.37482 0.13738 3.42671 2.78637 10 - -
50733 1.38629 1.38629 1.38629 1.38629
50734 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50735 11 2.91196 3.53626 0.12295 3.43565 11 - -
50736 1.38629 1.38629 1.38629 1.38629
50737 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50738 12 2.91196 3.53626 0.12295 3.43565 12 - -
50739 1.38629 1.38629 1.38629 1.38629
50740 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50741 13 3.37482 0.13738 3.42671 2.78637 13 - -
50742 1.38629 1.38629 1.38629 1.38629
50743 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50744 14 3.03791 2.56284 3.08799 0.18707 14 - -
50745 1.38629 1.38629 1.38629 1.38629
50746 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50747 15 3.37482 0.13738 3.42671 2.78637 15 - -
50748 1.38629 1.38629 1.38629 1.38629
50749 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50750 16 0.14875 3.32976 2.76899 3.22669 16 - -
50751 1.38629 1.38629 1.38629 1.38629
50752 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50753 17 2.91196 3.53626 0.12295 3.43565 17 - -
50754 1.38629 1.38629 1.38629 1.38629
50755 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50756 18 3.37482 0.13738 3.42671 2.78637 18 - -
50757 1.38629 1.38629 1.38629 1.38629
50758 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50759 19 3.37482 0.13738 3.42671 2.78637 19 - -
50760 1.38629 1.38629 1.38629 1.38629
50761 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50762 20 3.03791 2.56284 3.08799 0.18707 20 - -
50763 1.38629 1.38629 1.38629 1.38629
50764 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50765 21 0.14875 3.32976 2.76899 3.22669 21 - -
50766 1.38629 1.38629 1.38629 1.38629
50767 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50768 22 2.91196 3.53626 0.12295 3.43565 22 - -
50769 1.38629 1.38629 1.38629 1.38629
50770 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50771 23 0.14875 3.32976 2.76899 3.22669 23 - -
50772 1.38629 1.38629 1.38629 1.38629
50773 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50774 24 3.03791 2.56284 3.08799 0.18707 24 - -
50775 1.38629 1.38629 1.38629 1.38629
50776 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50777 25 3.37482 0.13738 3.42671 2.78637 25 - -
50778 1.38629 1.38629 1.38629 1.38629
50779 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50780 26 0.14875 3.32976 2.76899 3.22669 26 - -
50781 1.38629 1.38629 1.38629 1.38629
50782 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50783 27 3.37482 0.13738 3.42671 2.78637 27 - -
50784 1.38629 1.38629 1.38629 1.38629
50785 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50786 28 3.37482 0.13738 3.42671 2.78637 28 - -
50787 1.38629 1.38629 1.38629 1.38629
50788 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50789 29 3.37482 0.13738 3.42671 2.78637 29 - -
50790 1.38629 1.38629 1.38629 1.38629
50791 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50792 30 2.91196 3.53626 0.12295 3.43565 30 - -
50793 1.38629 1.38629 1.38629 1.38629
50794 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50795 31 3.37482 0.13738 3.42671 2.78637 31 - -
50796 1.38629 1.38629 1.38629 1.38629
50797 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50798 32 3.37482 0.13738 3.42671 2.78637 32 - -
50799 1.38629 1.38629 1.38629 1.38629
50800 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50801 33 2.91196 3.53626 0.12295 3.43565 33 - -
50802 1.38629 1.38629 1.38629 1.38629
50803 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50804 34 0.14875 3.32976 2.76899 3.22669 34 - -
50805 1.38629 1.38629 1.38629 1.38629
50806 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50807 35 0.14875 3.32976 2.76899 3.22669 35 - -
50808 1.38629 1.38629 1.38629 1.38629
50809 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50810 36 3.37482 0.13738 3.42671 2.78637 36 - -
50811 1.38629 1.38629 1.38629 1.38629
50812 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50813 37 3.03791 2.56284 3.08799 0.18707 37 - -
50814 1.38629 1.38629 1.38629 1.38629
50815 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50816 38 3.03791 2.56284 3.08799 0.18707 38 - -
50817 1.38629 1.38629 1.38629 1.38629
50818 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50819 39 0.14875 3.32976 2.76899 3.22669 39 - -
50820 1.38629 1.38629 1.38629 1.38629
50821 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50822 40 0.14875 3.32976 2.76899 3.22669 40 - -
50823 1.38629 1.38629 1.38629 1.38629
50824 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50825 41 2.91196 3.53626 0.12295 3.43565 41 - -
50826 1.38629 1.38629 1.38629 1.38629
50827 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50828 42 3.37482 0.13738 3.42671 2.78637 42 - -
50829 1.38629 1.38629 1.38629 1.38629
50830 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50831 43 0.14875 3.32976 2.76899 3.22669 43 - -
50832 1.38629 1.38629 1.38629 1.38629
50833 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50834 44 3.03791 2.56284 3.08799 0.18707 44 - -
50835 1.38629 1.38629 1.38629 1.38629
50836 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
50837 45 0.14875 3.32976 2.76899 3.22669 45 - -
50838 1.38629 1.38629 1.38629 1.38629
50839 0.01916 3.96442 * 1.46634 0.26236 0.00000 *
50840 //
50841 HMMER3/b [3.0 | March 2010]
50842 NAME 4_LSU_Metazoa_4_LSU_start_twentyfive_long
50843 LENG 45
50844 ALPH DNA
50845 RF no
50846 CS no
50847 MAP yes
50848 DATE Mon Feb 27 23:01:27 2012
50849 NSEQ 3
50850 EFFN 3.000000
50851 CKSUM 493454044
50852 STATS LOCAL MSV -8.0345 0.72034
50853 STATS LOCAL VITERBI -7.7520 0.72034
50854 STATS LOCAL FORWARD -3.8814 0.72034
50855 HMM A C G T
50856 m->m m->i m->d i->m i->i d->m d->d
50857 COMPO 1.22178 1.46087 1.44289 1.43963
50858 1.38629 1.38629 1.38629 1.38629
50859 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
50860 1 3.30705 0.14631 3.36166 2.73626 1 - -
50861 1.38629 1.38629 1.38629 1.38629
50862 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50863 2 2.86982 3.47591 0.13017 3.36931 2 - -
50864 1.38629 1.38629 1.38629 1.38629
50865 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50866 3 2.97980 2.52563 3.03204 0.19727 3 - -
50867 1.38629 1.38629 1.38629 1.38629
50868 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50869 4 2.86982 3.47591 0.13017 3.36931 4 - -
50870 1.38629 1.38629 1.38629 1.38629
50871 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50872 5 2.97980 2.52563 3.03204 0.19727 5 - -
50873 1.38629 1.38629 1.38629 1.38629
50874 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50875 6 0.15719 3.27118 2.73043 3.16274 6 - -
50876 1.38629 1.38629 1.38629 1.38629
50877 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50878 7 2.97980 2.52563 3.03204 0.19727 7 - -
50879 1.38629 1.38629 1.38629 1.38629
50880 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50881 8 3.30705 0.14631 3.36166 2.73626 8 - -
50882 1.38629 1.38629 1.38629 1.38629
50883 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50884 9 2.97980 2.52563 3.03204 0.19727 9 - -
50885 1.38629 1.38629 1.38629 1.38629
50886 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50887 10 2.86982 3.47591 0.13017 3.36931 10 - -
50888 1.38629 1.38629 1.38629 1.38629
50889 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50890 11 0.15719 3.27118 2.73043 3.16274 11 - -
50891 1.38629 1.38629 1.38629 1.38629
50892 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50893 12 0.15719 3.27118 2.73043 3.16274 12 - -
50894 1.38629 1.38629 1.38629 1.38629
50895 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50896 13 0.15719 3.27118 2.73043 3.16274 13 - -
50897 1.38629 1.38629 1.38629 1.38629
50898 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50899 14 2.97980 2.52563 3.03204 0.19727 14 - -
50900 1.38629 1.38629 1.38629 1.38629
50901 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50902 15 3.30705 0.14631 3.36166 2.73626 15 - -
50903 1.38629 1.38629 1.38629 1.38629
50904 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50905 16 0.15719 3.27118 2.73043 3.16274 16 - -
50906 1.38629 1.38629 1.38629 1.38629
50907 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50908 17 0.15719 3.27118 2.73043 3.16274 17 - -
50909 1.38629 1.38629 1.38629 1.38629
50910 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50911 18 2.86982 3.47591 0.13017 3.36931 18 - -
50912 1.38629 1.38629 1.38629 1.38629
50913 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50914 19 2.97980 2.52563 3.03204 0.19727 19 - -
50915 1.38629 1.38629 1.38629 1.38629
50916 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50917 20 2.86982 3.47591 0.13017 3.36931 20 - -
50918 1.38629 1.38629 1.38629 1.38629
50919 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50920 21 2.97980 2.52563 3.03204 0.19727 21 - -
50921 1.38629 1.38629 1.38629 1.38629
50922 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50923 22 2.86982 3.47591 0.13017 3.36931 22 - -
50924 1.38629 1.38629 1.38629 1.38629
50925 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50926 23 0.15719 3.27118 2.73043 3.16274 23 - -
50927 1.38629 1.38629 1.38629 1.38629
50928 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50929 24 3.30705 0.14631 3.36166 2.73626 24 - -
50930 1.38629 1.38629 1.38629 1.38629
50931 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50932 25 2.86982 3.47591 0.13017 3.36931 25 - -
50933 1.38629 1.38629 1.38629 1.38629
50934 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50935 26 0.15719 3.27118 2.73043 3.16274 26 - -
50936 1.38629 1.38629 1.38629 1.38629
50937 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50938 27 3.30705 0.14631 3.36166 2.73626 27 - -
50939 1.38629 1.38629 1.38629 1.38629
50940 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50941 28 3.30705 0.14631 3.36166 2.73626 28 - -
50942 1.38629 1.38629 1.38629 1.38629
50943 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50944 29 3.30705 0.14631 3.36166 2.73626 29 - -
50945 1.38629 1.38629 1.38629 1.38629
50946 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50947 30 2.86982 3.47591 0.13017 3.36931 30 - -
50948 1.38629 1.38629 1.38629 1.38629
50949 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50950 31 3.30705 0.14631 3.36166 2.73626 31 - -
50951 1.38629 1.38629 1.38629 1.38629
50952 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50953 32 2.97980 2.52563 3.03204 0.19727 32 - -
50954 1.38629 1.38629 1.38629 1.38629
50955 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50956 33 2.86982 3.47591 0.13017 3.36931 33 - -
50957 1.38629 1.38629 1.38629 1.38629
50958 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50959 34 0.15719 3.27118 2.73043 3.16274 34 - -
50960 1.38629 1.38629 1.38629 1.38629
50961 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50962 35 0.15719 3.27118 2.73043 3.16274 35 - -
50963 1.38629 1.38629 1.38629 1.38629
50964 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50965 36 3.30705 0.14631 3.36166 2.73626 36 - -
50966 1.38629 1.38629 1.38629 1.38629
50967 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50968 37 2.97980 2.52563 3.03204 0.19727 37 - -
50969 1.38629 1.38629 1.38629 1.38629
50970 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50971 38 2.97980 2.52563 3.03204 0.19727 38 - -
50972 1.38629 1.38629 1.38629 1.38629
50973 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50974 39 0.15719 3.27118 2.73043 3.16274 39 - -
50975 1.38629 1.38629 1.38629 1.38629
50976 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50977 40 0.15719 3.27118 2.73043 3.16274 40 - -
50978 1.38629 1.38629 1.38629 1.38629
50979 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50980 41 2.86982 3.47591 0.13017 3.36931 41 - -
50981 1.38629 1.38629 1.38629 1.38629
50982 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50983 42 3.30705 0.14631 3.36166 2.73626 42 - -
50984 1.38629 1.38629 1.38629 1.38629
50985 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50986 43 0.15719 3.27118 2.73043 3.16274 43 - -
50987 1.38629 1.38629 1.38629 1.38629
50988 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50989 44 2.97980 2.52563 3.03204 0.19727 44 - -
50990 1.38629 1.38629 1.38629 1.38629
50991 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
50992 45 0.15719 3.27118 2.73043 3.16274 45 - -
50993 1.38629 1.38629 1.38629 1.38629
50994 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
50995 //
50996 HMMER3/b [3.0 | March 2010]
50997 NAME 4_LSU_Metazoa_4_LSU_start_twentyfour_long
50998 LENG 45
50999 ALPH DNA
51000 RF no
51001 CS no
51002 MAP yes
51003 DATE Mon Feb 27 23:01:19 2012
51004 NSEQ 3
51005 EFFN 3.000000
51006 CKSUM 4113701339
51007 STATS LOCAL MSV -7.8908 0.72186
51008 STATS LOCAL VITERBI -7.6156 0.72186
51009 STATS LOCAL FORWARD -3.7494 0.72186
51010 HMM A C G T
51011 m->m m->i m->d i->m i->i d->m d->d
51012 COMPO 1.26577 1.40539 1.50943 1.37963
51013 1.38629 1.38629 1.38629 1.38629
51014 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
51015 1 2.97980 2.52563 3.03204 0.19727 1 - -
51016 1.38629 1.38629 1.38629 1.38629
51017 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51018 2 3.30705 0.14631 3.36166 2.73626 2 - -
51019 1.38629 1.38629 1.38629 1.38629
51020 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51021 3 0.15719 3.27118 2.73043 3.16274 3 - -
51022 1.38629 1.38629 1.38629 1.38629
51023 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51024 4 3.30705 0.14631 3.36166 2.73626 4 - -
51025 1.38629 1.38629 1.38629 1.38629
51026 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51027 5 2.86982 3.47591 0.13017 3.36931 5 - -
51028 1.38629 1.38629 1.38629 1.38629
51029 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51030 6 0.15719 3.27118 2.73043 3.16274 6 - -
51031 1.38629 1.38629 1.38629 1.38629
51032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51033 7 3.30705 0.14631 3.36166 2.73626 7 - -
51034 1.38629 1.38629 1.38629 1.38629
51035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51036 8 3.30705 0.14631 3.36166 2.73626 8 - -
51037 1.38629 1.38629 1.38629 1.38629
51038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51039 9 2.97980 2.52563 3.03204 0.19727 9 - -
51040 1.38629 1.38629 1.38629 1.38629
51041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51042 10 3.30705 0.14631 3.36166 2.73626 10 - -
51043 1.38629 1.38629 1.38629 1.38629
51044 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51045 11 0.15719 3.27118 2.73043 3.16274 11 - -
51046 1.38629 1.38629 1.38629 1.38629
51047 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51048 12 2.86982 3.47591 0.13017 3.36931 12 - -
51049 1.38629 1.38629 1.38629 1.38629
51050 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51051 13 2.97980 2.52563 3.03204 0.19727 13 - -
51052 1.38629 1.38629 1.38629 1.38629
51053 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51054 14 2.97980 2.52563 3.03204 0.19727 14 - -
51055 1.38629 1.38629 1.38629 1.38629
51056 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51057 15 3.30705 0.14631 3.36166 2.73626 15 - -
51058 1.38629 1.38629 1.38629 1.38629
51059 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51060 16 0.15719 3.27118 2.73043 3.16274 16 - -
51061 1.38629 1.38629 1.38629 1.38629
51062 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51063 17 2.86982 3.47591 0.13017 3.36931 17 - -
51064 1.38629 1.38629 1.38629 1.38629
51065 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51066 18 2.86982 3.47591 0.13017 3.36931 18 - -
51067 1.38629 1.38629 1.38629 1.38629
51068 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51069 19 2.97980 2.52563 3.03204 0.19727 19 - -
51070 1.38629 1.38629 1.38629 1.38629
51071 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51072 20 2.86982 3.47591 0.13017 3.36931 20 - -
51073 1.38629 1.38629 1.38629 1.38629
51074 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51075 21 0.15719 3.27118 2.73043 3.16274 21 - -
51076 1.38629 1.38629 1.38629 1.38629
51077 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51078 22 2.86982 3.47591 0.13017 3.36931 22 - -
51079 1.38629 1.38629 1.38629 1.38629
51080 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51081 23 0.15719 3.27118 2.73043 3.16274 23 - -
51082 1.38629 1.38629 1.38629 1.38629
51083 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51084 24 2.42422 1.33104 2.49423 0.57148 24 - -
51085 1.38629 1.38629 1.38629 1.38629
51086 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51087 25 2.97980 2.52563 3.03204 0.19727 25 - -
51088 1.38629 1.38629 1.38629 1.38629
51089 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51090 26 0.15719 3.27118 2.73043 3.16274 26 - -
51091 1.38629 1.38629 1.38629 1.38629
51092 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51093 27 3.30705 0.14631 3.36166 2.73626 27 - -
51094 1.38629 1.38629 1.38629 1.38629
51095 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51096 28 3.30705 0.14631 3.36166 2.73626 28 - -
51097 1.38629 1.38629 1.38629 1.38629
51098 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51099 29 2.09338 1.42206 0.67619 2.06387 29 - -
51100 1.38629 1.38629 1.38629 1.38629
51101 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51102 30 2.09338 1.42206 0.67619 2.06387 30 - -
51103 1.38629 1.38629 1.38629 1.38629
51104 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51105 31 3.30705 0.14631 3.36166 2.73626 31 - -
51106 1.38629 1.38629 1.38629 1.38629
51107 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51108 32 2.97980 2.52563 3.03204 0.19727 32 - -
51109 1.38629 1.38629 1.38629 1.38629
51110 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51111 33 2.86982 3.47591 0.13017 3.36931 33 - -
51112 1.38629 1.38629 1.38629 1.38629
51113 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51114 34 0.15719 3.27118 2.73043 3.16274 34 - -
51115 1.38629 1.38629 1.38629 1.38629
51116 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51117 35 0.15719 3.27118 2.73043 3.16274 35 - -
51118 1.38629 1.38629 1.38629 1.38629
51119 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51120 36 2.97980 2.52563 3.03204 0.19727 36 - -
51121 1.38629 1.38629 1.38629 1.38629
51122 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51123 37 2.97980 2.52563 3.03204 0.19727 37 - -
51124 1.38629 1.38629 1.38629 1.38629
51125 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51126 38 2.97980 2.52563 3.03204 0.19727 38 - -
51127 1.38629 1.38629 1.38629 1.38629
51128 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51129 39 0.15719 3.27118 2.73043 3.16274 39 - -
51130 1.38629 1.38629 1.38629 1.38629
51131 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51132 40 0.15719 3.27118 2.73043 3.16274 40 - -
51133 1.38629 1.38629 1.38629 1.38629
51134 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51135 41 2.86982 3.47591 0.13017 3.36931 41 - -
51136 1.38629 1.38629 1.38629 1.38629
51137 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51138 42 3.30705 0.14631 3.36166 2.73626 42 - -
51139 1.38629 1.38629 1.38629 1.38629
51140 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51141 43 0.15719 3.27118 2.73043 3.16274 43 - -
51142 1.38629 1.38629 1.38629 1.38629
51143 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51144 44 2.97980 2.52563 3.03204 0.19727 44 - -
51145 1.38629 1.38629 1.38629 1.38629
51146 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51147 45 0.15719 3.27118 2.73043 3.16274 45 - -
51148 1.38629 1.38629 1.38629 1.38629
51149 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
51150 //
51151 HMMER3/b [3.0 | March 2010]
51152 NAME 4_LSU_Metazoa_4_LSU_start_twentynine_long
51153 LENG 45
51154 ALPH DNA
51155 RF no
51156 CS no
51157 MAP yes
51158 DATE Mon Feb 27 23:01:59 2012
51159 NSEQ 4
51160 EFFN 3.285156
51161 CKSUM 405185964
51162 STATS LOCAL MSV -8.2383 0.71933
51163 STATS LOCAL VITERBI -7.6565 0.71933
51164 STATS LOCAL FORWARD -4.0319 0.71933
51165 HMM A C G T
51166 m->m m->i m->d i->m i->i d->m d->d
51167 COMPO 1.11058 1.38892 1.69564 1.43631
51168 1.38629 1.38629 1.38629 1.38629
51169 0.03714 4.00463 4.00463 1.46634 0.26236 0.00000 *
51170 1 0.14350 3.36817 2.79406 3.26870 1 - -
51171 1.38629 1.38629 1.38629 1.38629
51172 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51173 2 3.41917 0.13188 3.46922 2.81884 2 - -
51174 1.38629 1.38629 1.38629 1.38629
51175 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51176 3 3.07642 2.58739 3.12504 0.18065 3 - -
51177 1.38629 1.38629 1.38629 1.38629
51178 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51179 4 0.14350 3.36817 2.79406 3.26870 4 - -
51180 1.38629 1.38629 1.38629 1.38629
51181 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51182 5 2.93908 3.57547 0.11851 3.47887 5 - -
51183 1.38629 1.38629 1.38629 1.38629
51184 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51185 6 0.14350 3.36817 2.79406 3.26870 6 - -
51186 1.38629 1.38629 1.38629 1.38629
51187 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51188 7 3.41917 0.13188 3.46922 2.81884 7 - -
51189 1.38629 1.38629 1.38629 1.38629
51190 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51191 8 3.41917 0.13188 3.46922 2.81884 8 - -
51192 1.38629 1.38629 1.38629 1.38629
51193 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51194 9 3.07642 2.58739 3.12504 0.18065 9 - -
51195 1.38629 1.38629 1.38629 1.38629
51196 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51197 10 3.41917 0.13188 3.46922 2.81884 10 - -
51198 1.38629 1.38629 1.38629 1.38629
51199 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51200 11 0.14350 3.36817 2.79406 3.26870 11 - -
51201 1.38629 1.38629 1.38629 1.38629
51202 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51203 12 0.14350 3.36817 2.79406 3.26870 12 - -
51204 1.38629 1.38629 1.38629 1.38629
51205 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51206 13 3.07642 2.58739 3.12504 0.18065 13 - -
51207 1.38629 1.38629 1.38629 1.38629
51208 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51209 14 3.07642 2.58739 3.12504 0.18065 14 - -
51210 1.38629 1.38629 1.38629 1.38629
51211 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51212 15 3.07642 2.58739 3.12504 0.18065 15 - -
51213 1.38629 1.38629 1.38629 1.38629
51214 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51215 16 2.93908 3.57547 0.11851 3.47887 16 - -
51216 1.38629 1.38629 1.38629 1.38629
51217 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51218 17 0.14350 3.36817 2.79406 3.26870 17 - -
51219 1.38629 1.38629 1.38629 1.38629
51220 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51221 18 2.93908 3.57547 0.11851 3.47887 18 - -
51222 1.38629 1.38629 1.38629 1.38629
51223 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51224 19 3.41917 0.13188 3.46922 2.81884 19 - -
51225 1.38629 1.38629 1.38629 1.38629
51226 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51227 20 0.14350 3.36817 2.79406 3.26870 20 - -
51228 1.38629 1.38629 1.38629 1.38629
51229 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51230 21 0.14350 3.36817 2.79406 3.26870 21 - -
51231 1.38629 1.38629 1.38629 1.38629
51232 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51233 22 2.93908 3.57547 0.11851 3.47887 22 - -
51234 1.38629 1.38629 1.38629 1.38629
51235 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51236 23 0.14350 3.36817 2.79406 3.26870 23 - -
51237 1.38629 1.38629 1.38629 1.38629
51238 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51239 24 3.07642 2.58739 3.12504 0.18065 24 - -
51240 1.38629 1.38629 1.38629 1.38629
51241 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51242 25 3.07642 2.58739 3.12504 0.18065 25 - -
51243 1.38629 1.38629 1.38629 1.38629
51244 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51245 26 0.14350 3.36817 2.79406 3.26870 26 - -
51246 1.38629 1.38629 1.38629 1.38629
51247 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51248 27 3.41917 0.13188 3.46922 2.81884 27 - -
51249 1.38629 1.38629 1.38629 1.38629
51250 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51251 28 3.41917 0.13188 3.46922 2.81884 28 - -
51252 1.38629 1.38629 1.38629 1.38629
51253 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51254 29 3.41917 0.13188 3.46922 2.81884 29 - -
51255 1.38629 1.38629 1.38629 1.38629
51256 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51257 30 2.93908 3.57547 0.11851 3.47887 30 - -
51258 1.38629 1.38629 1.38629 1.38629
51259 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51260 31 3.41917 0.13188 3.46922 2.81884 31 - -
51261 1.38629 1.38629 1.38629 1.38629
51262 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51263 32 3.07642 2.58739 3.12504 0.18065 32 - -
51264 1.38629 1.38629 1.38629 1.38629
51265 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51266 33 2.93908 3.57547 0.11851 3.47887 33 - -
51267 1.38629 1.38629 1.38629 1.38629
51268 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51269 34 0.14350 3.36817 2.79406 3.26870 34 - -
51270 1.38629 1.38629 1.38629 1.38629
51271 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51272 35 0.14350 3.36817 2.79406 3.26870 35 - -
51273 1.38629 1.38629 1.38629 1.38629
51274 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51275 36 3.41917 0.13188 3.46922 2.81884 36 - -
51276 1.38629 1.38629 1.38629 1.38629
51277 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51278 37 3.07642 2.58739 3.12504 0.18065 37 - -
51279 1.38629 1.38629 1.38629 1.38629
51280 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51281 38 3.07642 2.58739 3.12504 0.18065 38 - -
51282 1.38629 1.38629 1.38629 1.38629
51283 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51284 39 0.14350 3.36817 2.79406 3.26870 39 - -
51285 1.38629 1.38629 1.38629 1.38629
51286 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51287 40 0.14350 3.36817 2.79406 3.26870 40 - -
51288 1.38629 1.38629 1.38629 1.38629
51289 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51290 41 2.93908 3.57547 0.11851 3.47887 41 - -
51291 1.38629 1.38629 1.38629 1.38629
51292 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51293 42 3.41917 0.13188 3.46922 2.81884 42 - -
51294 1.38629 1.38629 1.38629 1.38629
51295 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51296 43 0.14350 3.36817 2.79406 3.26870 43 - -
51297 1.38629 1.38629 1.38629 1.38629
51298 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51299 44 3.07642 2.58739 3.12504 0.18065 44 - -
51300 1.38629 1.38629 1.38629 1.38629
51301 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
51302 45 0.14350 3.36817 2.79406 3.26870 45 - -
51303 1.38629 1.38629 1.38629 1.38629
51304 0.01874 3.98623 * 1.46634 0.26236 0.00000 *
51305 //
51306 HMMER3/b [3.0 | March 2010]
51307 NAME 4_LSU_Metazoa_4_LSU_start_twentyonea_long
51308 LENG 45
51309 ALPH DNA
51310 RF no
51311 CS no
51312 MAP yes
51313 DATE Mon Feb 27 22:59:57 2012
51314 NSEQ 3
51315 EFFN 3.000000
51316 CKSUM 1175917883
51317 STATS LOCAL MSV -7.9911 0.72114
51318 STATS LOCAL VITERBI -7.8834 0.72114
51319 STATS LOCAL FORWARD -3.9581 0.72114
51320 HMM A C G T
51321 m->m m->i m->d i->m i->i d->m d->d
51322 COMPO 1.20657 1.30856 1.59272 1.48194
51323 1.38629 1.38629 1.38629 1.38629
51324 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
51325 1 1.32055 2.11354 2.18868 0.69287 1 - -
51326 1.38629 1.38629 1.38629 1.38629
51327 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51328 2 2.97980 2.52563 3.03204 0.19727 2 - -
51329 1.38629 1.38629 1.38629 1.38629
51330 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51331 3 2.97980 2.52563 3.03204 0.19727 3 - -
51332 1.38629 1.38629 1.38629 1.38629
51333 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51334 4 3.30705 0.14631 3.36166 2.73626 4 - -
51335 1.38629 1.38629 1.38629 1.38629
51336 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51337 5 2.86982 3.47591 0.13017 3.36931 5 - -
51338 1.38629 1.38629 1.38629 1.38629
51339 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51340 6 0.15719 3.27118 2.73043 3.16274 6 - -
51341 1.38629 1.38629 1.38629 1.38629
51342 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51343 7 3.30705 0.14631 3.36166 2.73626 7 - -
51344 1.38629 1.38629 1.38629 1.38629
51345 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51346 8 3.30705 0.14631 3.36166 2.73626 8 - -
51347 1.38629 1.38629 1.38629 1.38629
51348 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51349 9 2.97980 2.52563 3.03204 0.19727 9 - -
51350 1.38629 1.38629 1.38629 1.38629
51351 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51352 10 2.86982 3.47591 0.13017 3.36931 10 - -
51353 1.38629 1.38629 1.38629 1.38629
51354 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51355 11 0.15719 3.27118 2.73043 3.16274 11 - -
51356 1.38629 1.38629 1.38629 1.38629
51357 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51358 12 0.15719 3.27118 2.73043 3.16274 12 - -
51359 1.38629 1.38629 1.38629 1.38629
51360 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51361 13 3.30705 0.14631 3.36166 2.73626 13 - -
51362 1.38629 1.38629 1.38629 1.38629
51363 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51364 14 2.97980 2.52563 3.03204 0.19727 14 - -
51365 1.38629 1.38629 1.38629 1.38629
51366 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51367 15 3.30705 0.14631 3.36166 2.73626 15 - -
51368 1.38629 1.38629 1.38629 1.38629
51369 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51370 16 0.15719 3.27118 2.73043 3.16274 16 - -
51371 1.38629 1.38629 1.38629 1.38629
51372 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51373 17 2.86982 3.47591 0.13017 3.36931 17 - -
51374 1.38629 1.38629 1.38629 1.38629
51375 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51376 18 0.15719 3.27118 2.73043 3.16274 18 - -
51377 1.38629 1.38629 1.38629 1.38629
51378 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51379 19 3.30705 0.14631 3.36166 2.73626 19 - -
51380 1.38629 1.38629 1.38629 1.38629
51381 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51382 20 2.86982 3.47591 0.13017 3.36931 20 - -
51383 1.38629 1.38629 1.38629 1.38629
51384 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51385 21 2.97980 2.52563 3.03204 0.19727 21 - -
51386 1.38629 1.38629 1.38629 1.38629
51387 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51388 22 2.86982 3.47591 0.13017 3.36931 22 - -
51389 1.38629 1.38629 1.38629 1.38629
51390 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51391 23 0.15719 3.27118 2.73043 3.16274 23 - -
51392 1.38629 1.38629 1.38629 1.38629
51393 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51394 24 0.15719 3.27118 2.73043 3.16274 24 - -
51395 1.38629 1.38629 1.38629 1.38629
51396 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51397 25 2.43258 1.35379 2.50233 0.55855 25 - -
51398 1.38629 1.38629 1.38629 1.38629
51399 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51400 26 0.15719 3.27118 2.73043 3.16274 26 - -
51401 1.38629 1.38629 1.38629 1.38629
51402 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51403 27 3.30705 0.14631 3.36166 2.73626 27 - -
51404 1.38629 1.38629 1.38629 1.38629
51405 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51406 28 3.30705 0.14631 3.36166 2.73626 28 - -
51407 1.38629 1.38629 1.38629 1.38629
51408 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51409 29 3.30705 0.14631 3.36166 2.73626 29 - -
51410 1.38629 1.38629 1.38629 1.38629
51411 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51412 30 2.86982 3.47591 0.13017 3.36931 30 - -
51413 1.38629 1.38629 1.38629 1.38629
51414 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51415 31 3.30705 0.14631 3.36166 2.73626 31 - -
51416 1.38629 1.38629 1.38629 1.38629
51417 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51418 32 2.97980 2.52563 3.03204 0.19727 32 - -
51419 1.38629 1.38629 1.38629 1.38629
51420 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51421 33 2.86982 3.47591 0.13017 3.36931 33 - -
51422 1.38629 1.38629 1.38629 1.38629
51423 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51424 34 0.15719 3.27118 2.73043 3.16274 34 - -
51425 1.38629 1.38629 1.38629 1.38629
51426 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51427 35 0.15719 3.27118 2.73043 3.16274 35 - -
51428 1.38629 1.38629 1.38629 1.38629
51429 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51430 36 3.30705 0.14631 3.36166 2.73626 36 - -
51431 1.38629 1.38629 1.38629 1.38629
51432 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51433 37 2.97980 2.52563 3.03204 0.19727 37 - -
51434 1.38629 1.38629 1.38629 1.38629
51435 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51436 38 2.97980 2.52563 3.03204 0.19727 38 - -
51437 1.38629 1.38629 1.38629 1.38629
51438 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51439 39 0.15719 3.27118 2.73043 3.16274 39 - -
51440 1.38629 1.38629 1.38629 1.38629
51441 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51442 40 0.15719 3.27118 2.73043 3.16274 40 - -
51443 1.38629 1.38629 1.38629 1.38629
51444 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51445 41 2.86982 3.47591 0.13017 3.36931 41 - -
51446 1.38629 1.38629 1.38629 1.38629
51447 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51448 42 3.30705 0.14631 3.36166 2.73626 42 - -
51449 1.38629 1.38629 1.38629 1.38629
51450 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51451 43 0.15719 3.27118 2.73043 3.16274 43 - -
51452 1.38629 1.38629 1.38629 1.38629
51453 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51454 44 2.97980 2.52563 3.03204 0.19727 44 - -
51455 1.38629 1.38629 1.38629 1.38629
51456 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
51457 45 0.15719 3.27118 2.73043 3.16274 45 - -
51458 1.38629 1.38629 1.38629 1.38629
51459 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
51460 //
51461 HMMER3/b [3.0 | March 2010]
51462 NAME 4_LSU_Metazoa_4_LSU_start_twentyoneb_long
51463 LENG 45
51464 ALPH DNA
51465 RF no
51466 CS no
51467 MAP yes
51468 DATE Mon Feb 27 23:00:03 2012
51469 NSEQ 7
51470 EFFN 3.257324
51471 CKSUM 2198767491
51472 STATS LOCAL MSV -8.1040 0.71931
51473 STATS LOCAL VITERBI -7.7630 0.71931
51474 STATS LOCAL FORWARD -4.1651 0.71931
51475 HMM A C G T
51476 m->m m->i m->d i->m i->i d->m d->d
51477 COMPO 1.27979 1.32449 1.52710 1.43213
51478 1.38629 1.38629 1.38629 1.38629
51479 0.03734 3.99954 3.99954 1.46634 0.26236 0.00000 *
51480 1 3.06731 2.58158 3.11627 0.18215 1 - -
51481 1.38629 1.38629 1.38629 1.38629
51482 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51483 2 3.06731 2.58158 3.11627 0.18215 2 - -
51484 1.38629 1.38629 1.38629 1.38629
51485 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51486 3 2.93271 3.56625 0.11954 3.46869 3 - -
51487 1.38629 1.38629 1.38629 1.38629
51488 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51489 4 3.06731 2.58158 3.11627 0.18215 4 - -
51490 1.38629 1.38629 1.38629 1.38629
51491 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51492 5 2.93271 3.56625 0.11954 3.46869 5 - -
51493 1.38629 1.38629 1.38629 1.38629
51494 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51495 6 0.14472 3.35911 2.78816 3.25878 6 - -
51496 1.38629 1.38629 1.38629 1.38629
51497 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51498 7 3.40872 0.13316 3.45920 2.81121 7 - -
51499 1.38629 1.38629 1.38629 1.38629
51500 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51501 8 3.40872 0.13316 3.45920 2.81121 8 - -
51502 1.38629 1.38629 1.38629 1.38629
51503 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51504 9 3.06731 2.58158 3.11627 0.18215 9 - -
51505 1.38629 1.38629 1.38629 1.38629
51506 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51507 10 2.93271 3.56625 0.11954 3.46869 10 - -
51508 1.38629 1.38629 1.38629 1.38629
51509 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51510 11 0.14472 3.35911 2.78816 3.25878 11 - -
51511 1.38629 1.38629 1.38629 1.38629
51512 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51513 12 0.14472 3.35911 2.78816 3.25878 12 - -
51514 1.38629 1.38629 1.38629 1.38629
51515 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51516 13 3.40872 0.13316 3.45920 2.81121 13 - -
51517 1.38629 1.38629 1.38629 1.38629
51518 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51519 14 3.06731 2.58158 3.11627 0.18215 14 - -
51520 1.38629 1.38629 1.38629 1.38629
51521 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51522 15 3.40872 0.13316 3.45920 2.81121 15 - -
51523 1.38629 1.38629 1.38629 1.38629
51524 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51525 16 0.14472 3.35911 2.78816 3.25878 16 - -
51526 1.38629 1.38629 1.38629 1.38629
51527 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51528 17 2.93271 3.56625 0.11954 3.46869 17 - -
51529 1.38629 1.38629 1.38629 1.38629
51530 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51531 18 0.14472 3.35911 2.78816 3.25878 18 - -
51532 1.38629 1.38629 1.38629 1.38629
51533 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51534 19 3.40872 0.13316 3.45920 2.81121 19 - -
51535 1.38629 1.38629 1.38629 1.38629
51536 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51537 20 2.93271 3.56625 0.11954 3.46869 20 - -
51538 1.38629 1.38629 1.38629 1.38629
51539 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51540 21 3.06731 2.58158 3.11627 0.18215 21 - -
51541 1.38629 1.38629 1.38629 1.38629
51542 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51543 22 2.93271 3.56625 0.11954 3.46869 22 - -
51544 1.38629 1.38629 1.38629 1.38629
51545 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51546 23 0.14472 3.35911 2.78816 3.25878 23 - -
51547 1.38629 1.38629 1.38629 1.38629
51548 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51549 24 3.06731 2.58158 3.11627 0.18215 24 - -
51550 1.38629 1.38629 1.38629 1.38629
51551 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51552 25 3.40872 0.13316 3.45920 2.81121 25 - -
51553 1.38629 1.38629 1.38629 1.38629
51554 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51555 26 0.14472 3.35911 2.78816 3.25878 26 - -
51556 1.38629 1.38629 1.38629 1.38629
51557 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51558 27 3.40872 0.13316 3.45920 2.81121 27 - -
51559 1.38629 1.38629 1.38629 1.38629
51560 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51561 28 3.40872 0.13316 3.45920 2.81121 28 - -
51562 1.38629 1.38629 1.38629 1.38629
51563 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51564 29 3.40872 0.13316 3.45920 2.81121 29 - -
51565 1.38629 1.38629 1.38629 1.38629
51566 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51567 30 2.93271 3.56625 0.11954 3.46869 30 - -
51568 1.38629 1.38629 1.38629 1.38629
51569 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51570 31 3.40872 0.13316 3.45920 2.81121 31 - -
51571 1.38629 1.38629 1.38629 1.38629
51572 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51573 32 3.06731 2.58158 3.11627 0.18215 32 - -
51574 1.38629 1.38629 1.38629 1.38629
51575 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51576 33 2.93271 3.56625 0.11954 3.46869 33 - -
51577 1.38629 1.38629 1.38629 1.38629
51578 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51579 34 0.14472 3.35911 2.78816 3.25878 34 - -
51580 1.38629 1.38629 1.38629 1.38629
51581 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51582 35 0.14472 3.35911 2.78816 3.25878 35 - -
51583 1.38629 1.38629 1.38629 1.38629
51584 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51585 36 3.40872 0.13316 3.45920 2.81121 36 - -
51586 1.38629 1.38629 1.38629 1.38629
51587 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51588 37 3.06731 2.58158 3.11627 0.18215 37 - -
51589 1.38629 1.38629 1.38629 1.38629
51590 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51591 38 3.06731 2.58158 3.11627 0.18215 38 - -
51592 1.38629 1.38629 1.38629 1.38629
51593 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51594 39 0.14472 3.35911 2.78816 3.25878 39 - -
51595 1.38629 1.38629 1.38629 1.38629
51596 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51597 40 0.14472 3.35911 2.78816 3.25878 40 - -
51598 1.38629 1.38629 1.38629 1.38629
51599 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51600 41 2.93271 3.56625 0.11954 3.46869 41 - -
51601 1.38629 1.38629 1.38629 1.38629
51602 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51603 42 3.40872 0.13316 3.45920 2.81121 42 - -
51604 1.38629 1.38629 1.38629 1.38629
51605 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51606 43 0.14472 3.35911 2.78816 3.25878 43 - -
51607 1.38629 1.38629 1.38629 1.38629
51608 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51609 44 3.06731 2.58158 3.11627 0.18215 44 - -
51610 1.38629 1.38629 1.38629 1.38629
51611 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547
51612 45 0.14472 3.35911 2.78816 3.25878 45 - -
51613 1.38629 1.38629 1.38629 1.38629
51614 0.01884 3.98105 * 1.46634 0.26236 0.00000 *
51615 //
51616 HMMER3/b [3.0 | March 2010]
51617 NAME 4_LSU_Metazoa_4_LSU_start_twentyonec_long
51618 LENG 45
51619 ALPH DNA
51620 RF no
51621 CS no
51622 MAP yes
51623 DATE Mon Feb 27 23:00:09 2012
51624 NSEQ 2
51625 EFFN 2.000000
51626 CKSUM 3822712959
51627 STATS LOCAL MSV -7.4025 0.72799
51628 STATS LOCAL VITERBI -8.2146 0.72799
51629 STATS LOCAL FORWARD -3.4594 0.72799
51630 HMM A C G T
51631 m->m m->i m->d i->m i->i d->m d->d
51632 COMPO 1.19201 1.29229 1.56685 1.54625
51633 1.38629 1.38629 1.38629 1.38629
51634 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
51635 1 2.81865 0.23582 2.88868 2.35662 1 - -
51636 1.38629 1.38629 1.38629 1.38629
51637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51638 2 0.23862 2.84929 2.43386 2.70756 2 - -
51639 1.38629 1.38629 1.38629 1.38629
51640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51641 3 0.23862 2.84929 2.43386 2.70756 3 - -
51642 1.38629 1.38629 1.38629 1.38629
51643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51644 4 2.57915 2.25909 2.64442 0.28946 4 - -
51645 1.38629 1.38629 1.38629 1.38629
51646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51647 5 2.53331 3.02441 0.20344 2.88069 5 - -
51648 1.38629 1.38629 1.38629 1.38629
51649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51650 6 0.23862 2.84929 2.43386 2.70756 6 - -
51651 1.38629 1.38629 1.38629 1.38629
51652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51653 7 2.81865 0.23582 2.88868 2.35662 7 - -
51654 1.38629 1.38629 1.38629 1.38629
51655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51656 8 2.81865 0.23582 2.88868 2.35662 8 - -
51657 1.38629 1.38629 1.38629 1.38629
51658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51659 9 2.57915 2.25909 2.64442 0.28946 9 - -
51660 1.38629 1.38629 1.38629 1.38629
51661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51662 10 2.53331 3.02441 0.20344 2.88069 10 - -
51663 1.38629 1.38629 1.38629 1.38629
51664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51665 11 0.23862 2.84929 2.43386 2.70756 11 - -
51666 1.38629 1.38629 1.38629 1.38629
51667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51668 12 0.23862 2.84929 2.43386 2.70756 12 - -
51669 1.38629 1.38629 1.38629 1.38629
51670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51671 13 2.81865 0.23582 2.88868 2.35662 13 - -
51672 1.38629 1.38629 1.38629 1.38629
51673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51674 14 2.57915 2.25909 2.64442 0.28946 14 - -
51675 1.38629 1.38629 1.38629 1.38629
51676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51677 15 2.81865 0.23582 2.88868 2.35662 15 - -
51678 1.38629 1.38629 1.38629 1.38629
51679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51680 16 0.23862 2.84929 2.43386 2.70756 16 - -
51681 1.38629 1.38629 1.38629 1.38629
51682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51683 17 2.53331 3.02441 0.20344 2.88069 17 - -
51684 1.38629 1.38629 1.38629 1.38629
51685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51686 18 0.23862 2.84929 2.43386 2.70756 18 - -
51687 1.38629 1.38629 1.38629 1.38629
51688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51689 19 2.81865 0.23582 2.88868 2.35662 19 - -
51690 1.38629 1.38629 1.38629 1.38629
51691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51692 20 2.53331 3.02441 0.20344 2.88069 20 - -
51693 1.38629 1.38629 1.38629 1.38629
51694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51695 21 2.57915 2.25909 2.64442 0.28946 21 - -
51696 1.38629 1.38629 1.38629 1.38629
51697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51698 22 2.53331 3.02441 0.20344 2.88069 22 - -
51699 1.38629 1.38629 1.38629 1.38629
51700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51701 23 0.23862 2.84929 2.43386 2.70756 23 - -
51702 1.38629 1.38629 1.38629 1.38629
51703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51704 24 2.81865 0.23582 2.88868 2.35662 24 - -
51705 1.38629 1.38629 1.38629 1.38629
51706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51707 25 2.57915 2.25909 2.64442 0.28946 25 - -
51708 1.38629 1.38629 1.38629 1.38629
51709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51710 26 0.23862 2.84929 2.43386 2.70756 26 - -
51711 1.38629 1.38629 1.38629 1.38629
51712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51713 27 2.81865 0.23582 2.88868 2.35662 27 - -
51714 1.38629 1.38629 1.38629 1.38629
51715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51716 28 2.81865 0.23582 2.88868 2.35662 28 - -
51717 1.38629 1.38629 1.38629 1.38629
51718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51719 29 2.81865 0.23582 2.88868 2.35662 29 - -
51720 1.38629 1.38629 1.38629 1.38629
51721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51722 30 2.53331 3.02441 0.20344 2.88069 30 - -
51723 1.38629 1.38629 1.38629 1.38629
51724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51725 31 2.81865 0.23582 2.88868 2.35662 31 - -
51726 1.38629 1.38629 1.38629 1.38629
51727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51728 32 2.57915 2.25909 2.64442 0.28946 32 - -
51729 1.38629 1.38629 1.38629 1.38629
51730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51731 33 2.53331 3.02441 0.20344 2.88069 33 - -
51732 1.38629 1.38629 1.38629 1.38629
51733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51734 34 0.23862 2.84929 2.43386 2.70756 34 - -
51735 1.38629 1.38629 1.38629 1.38629
51736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51737 35 0.23862 2.84929 2.43386 2.70756 35 - -
51738 1.38629 1.38629 1.38629 1.38629
51739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51740 36 2.81865 0.23582 2.88868 2.35662 36 - -
51741 1.38629 1.38629 1.38629 1.38629
51742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51743 37 2.57915 2.25909 2.64442 0.28946 37 - -
51744 1.38629 1.38629 1.38629 1.38629
51745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51746 38 2.57915 2.25909 2.64442 0.28946 38 - -
51747 1.38629 1.38629 1.38629 1.38629
51748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51749 39 0.23862 2.84929 2.43386 2.70756 39 - -
51750 1.38629 1.38629 1.38629 1.38629
51751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51752 40 0.23862 2.84929 2.43386 2.70756 40 - -
51753 1.38629 1.38629 1.38629 1.38629
51754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51755 41 2.53331 3.02441 0.20344 2.88069 41 - -
51756 1.38629 1.38629 1.38629 1.38629
51757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51758 42 2.81865 0.23582 2.88868 2.35662 42 - -
51759 1.38629 1.38629 1.38629 1.38629
51760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51761 43 0.23862 2.84929 2.43386 2.70756 43 - -
51762 1.38629 1.38629 1.38629 1.38629
51763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51764 44 2.57915 2.25909 2.64442 0.28946 44 - -
51765 1.38629 1.38629 1.38629 1.38629
51766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51767 45 0.23862 2.84929 2.43386 2.70756 45 - -
51768 1.38629 1.38629 1.38629 1.38629
51769 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
51770 //
51771 HMMER3/b [3.0 | March 2010]
51772 NAME 4_LSU_Metazoa_4_LSU_start_twentyoned_long
51773 LENG 45
51774 ALPH DNA
51775 RF no
51776 CS no
51777 MAP yes
51778 DATE Mon Feb 27 23:00:15 2012
51779 NSEQ 2
51780 EFFN 2.000000
51781 CKSUM 3101498025
51782 STATS LOCAL MSV -7.4383 0.72813
51783 STATS LOCAL VITERBI -8.3384 0.72813
51784 STATS LOCAL FORWARD -3.5719 0.72813
51785 HMM A C G T
51786 m->m m->i m->d i->m i->i d->m d->d
51787 COMPO 1.29173 1.34298 1.49938 1.42350
51788 1.38629 1.38629 1.38629 1.38629
51789 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
51790 1 2.57915 2.25909 2.64442 0.28946 1 - -
51791 1.38629 1.38629 1.38629 1.38629
51792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51793 2 2.57915 2.25909 2.64442 0.28946 2 - -
51794 1.38629 1.38629 1.38629 1.38629
51795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51796 3 2.57915 2.25909 2.64442 0.28946 3 - -
51797 1.38629 1.38629 1.38629 1.38629
51798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51799 4 2.57915 2.25909 2.64442 0.28946 4 - -
51800 1.38629 1.38629 1.38629 1.38629
51801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51802 5 2.53331 3.02441 0.20344 2.88069 5 - -
51803 1.38629 1.38629 1.38629 1.38629
51804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51805 6 0.23862 2.84929 2.43386 2.70756 6 - -
51806 1.38629 1.38629 1.38629 1.38629
51807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51808 7 2.81865 0.23582 2.88868 2.35662 7 - -
51809 1.38629 1.38629 1.38629 1.38629
51810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51811 8 2.81865 0.23582 2.88868 2.35662 8 - -
51812 1.38629 1.38629 1.38629 1.38629
51813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51814 9 2.57915 2.25909 2.64442 0.28946 9 - -
51815 1.38629 1.38629 1.38629 1.38629
51816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51817 10 2.53331 3.02441 0.20344 2.88069 10 - -
51818 1.38629 1.38629 1.38629 1.38629
51819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51820 11 0.23862 2.84929 2.43386 2.70756 11 - -
51821 1.38629 1.38629 1.38629 1.38629
51822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51823 12 0.23862 2.84929 2.43386 2.70756 12 - -
51824 1.38629 1.38629 1.38629 1.38629
51825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51826 13 2.81865 0.23582 2.88868 2.35662 13 - -
51827 1.38629 1.38629 1.38629 1.38629
51828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51829 14 2.57915 2.25909 2.64442 0.28946 14 - -
51830 1.38629 1.38629 1.38629 1.38629
51831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51832 15 2.81865 0.23582 2.88868 2.35662 15 - -
51833 1.38629 1.38629 1.38629 1.38629
51834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51835 16 0.23862 2.84929 2.43386 2.70756 16 - -
51836 1.38629 1.38629 1.38629 1.38629
51837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51838 17 2.53331 3.02441 0.20344 2.88069 17 - -
51839 1.38629 1.38629 1.38629 1.38629
51840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51841 18 2.57915 2.25909 2.64442 0.28946 18 - -
51842 1.38629 1.38629 1.38629 1.38629
51843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51844 19 2.81865 0.23582 2.88868 2.35662 19 - -
51845 1.38629 1.38629 1.38629 1.38629
51846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51847 20 2.53331 3.02441 0.20344 2.88069 20 - -
51848 1.38629 1.38629 1.38629 1.38629
51849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51850 21 0.23862 2.84929 2.43386 2.70756 21 - -
51851 1.38629 1.38629 1.38629 1.38629
51852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51853 22 2.53331 3.02441 0.20344 2.88069 22 - -
51854 1.38629 1.38629 1.38629 1.38629
51855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51856 23 0.23862 2.84929 2.43386 2.70756 23 - -
51857 1.38629 1.38629 1.38629 1.38629
51858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51859 24 2.53331 3.02441 0.20344 2.88069 24 - -
51860 1.38629 1.38629 1.38629 1.38629
51861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51862 25 2.81865 0.23582 2.88868 2.35662 25 - -
51863 1.38629 1.38629 1.38629 1.38629
51864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51865 26 0.23862 2.84929 2.43386 2.70756 26 - -
51866 1.38629 1.38629 1.38629 1.38629
51867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51868 27 2.81865 0.23582 2.88868 2.35662 27 - -
51869 1.38629 1.38629 1.38629 1.38629
51870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51871 28 2.81865 0.23582 2.88868 2.35662 28 - -
51872 1.38629 1.38629 1.38629 1.38629
51873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51874 29 2.81865 0.23582 2.88868 2.35662 29 - -
51875 1.38629 1.38629 1.38629 1.38629
51876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51877 30 2.53331 3.02441 0.20344 2.88069 30 - -
51878 1.38629 1.38629 1.38629 1.38629
51879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51880 31 2.81865 0.23582 2.88868 2.35662 31 - -
51881 1.38629 1.38629 1.38629 1.38629
51882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51883 32 2.57915 2.25909 2.64442 0.28946 32 - -
51884 1.38629 1.38629 1.38629 1.38629
51885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51886 33 2.53331 3.02441 0.20344 2.88069 33 - -
51887 1.38629 1.38629 1.38629 1.38629
51888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51889 34 0.23862 2.84929 2.43386 2.70756 34 - -
51890 1.38629 1.38629 1.38629 1.38629
51891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51892 35 0.23862 2.84929 2.43386 2.70756 35 - -
51893 1.38629 1.38629 1.38629 1.38629
51894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51895 36 2.81865 0.23582 2.88868 2.35662 36 - -
51896 1.38629 1.38629 1.38629 1.38629
51897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51898 37 2.57915 2.25909 2.64442 0.28946 37 - -
51899 1.38629 1.38629 1.38629 1.38629
51900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51901 38 2.57915 2.25909 2.64442 0.28946 38 - -
51902 1.38629 1.38629 1.38629 1.38629
51903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51904 39 0.23862 2.84929 2.43386 2.70756 39 - -
51905 1.38629 1.38629 1.38629 1.38629
51906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51907 40 0.23862 2.84929 2.43386 2.70756 40 - -
51908 1.38629 1.38629 1.38629 1.38629
51909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51910 41 2.53331 3.02441 0.20344 2.88069 41 - -
51911 1.38629 1.38629 1.38629 1.38629
51912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51913 42 2.81865 0.23582 2.88868 2.35662 42 - -
51914 1.38629 1.38629 1.38629 1.38629
51915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51916 43 0.23862 2.84929 2.43386 2.70756 43 - -
51917 1.38629 1.38629 1.38629 1.38629
51918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51919 44 2.57915 2.25909 2.64442 0.28946 44 - -
51920 1.38629 1.38629 1.38629 1.38629
51921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51922 45 0.23862 2.84929 2.43386 2.70756 45 - -
51923 1.38629 1.38629 1.38629 1.38629
51924 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
51925 //
51926 HMMER3/b [3.0 | March 2010]
51927 NAME 4_LSU_Metazoa_4_LSU_start_twentyonee_long
51928 LENG 45
51929 ALPH DNA
51930 RF no
51931 CS no
51932 MAP yes
51933 DATE Mon Feb 27 23:00:22 2012
51934 NSEQ 2
51935 EFFN 2.000000
51936 CKSUM 1082780720
51937 STATS LOCAL MSV -7.4819 0.72804
51938 STATS LOCAL VITERBI -8.3452 0.72804
51939 STATS LOCAL FORWARD -3.6247 0.72804
51940 HMM A C G T
51941 m->m m->i m->d i->m i->i d->m d->d
51942 COMPO 1.34479 1.34306 1.43607 1.42505
51943 1.38629 1.38629 1.38629 1.38629
51944 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
51945 1 2.57915 2.25909 2.64442 0.28946 1 - -
51946 1.38629 1.38629 1.38629 1.38629
51947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51948 2 2.57915 2.25909 2.64442 0.28946 2 - -
51949 1.38629 1.38629 1.38629 1.38629
51950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51951 3 2.57915 2.25909 2.64442 0.28946 3 - -
51952 1.38629 1.38629 1.38629 1.38629
51953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51954 4 2.81865 0.23582 2.88868 2.35662 4 - -
51955 1.38629 1.38629 1.38629 1.38629
51956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51957 5 2.53331 3.02441 0.20344 2.88069 5 - -
51958 1.38629 1.38629 1.38629 1.38629
51959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51960 6 0.23862 2.84929 2.43386 2.70756 6 - -
51961 1.38629 1.38629 1.38629 1.38629
51962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51963 7 2.81865 0.23582 2.88868 2.35662 7 - -
51964 1.38629 1.38629 1.38629 1.38629
51965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51966 8 2.81865 0.23582 2.88868 2.35662 8 - -
51967 1.38629 1.38629 1.38629 1.38629
51968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51969 9 2.57915 2.25909 2.64442 0.28946 9 - -
51970 1.38629 1.38629 1.38629 1.38629
51971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51972 10 2.53331 3.02441 0.20344 2.88069 10 - -
51973 1.38629 1.38629 1.38629 1.38629
51974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51975 11 0.23862 2.84929 2.43386 2.70756 11 - -
51976 1.38629 1.38629 1.38629 1.38629
51977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51978 12 0.23862 2.84929 2.43386 2.70756 12 - -
51979 1.38629 1.38629 1.38629 1.38629
51980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51981 13 2.81865 0.23582 2.88868 2.35662 13 - -
51982 1.38629 1.38629 1.38629 1.38629
51983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51984 14 2.57915 2.25909 2.64442 0.28946 14 - -
51985 1.38629 1.38629 1.38629 1.38629
51986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51987 15 2.81865 0.23582 2.88868 2.35662 15 - -
51988 1.38629 1.38629 1.38629 1.38629
51989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51990 16 0.23862 2.84929 2.43386 2.70756 16 - -
51991 1.38629 1.38629 1.38629 1.38629
51992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51993 17 2.53331 3.02441 0.20344 2.88069 17 - -
51994 1.38629 1.38629 1.38629 1.38629
51995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51996 18 2.53331 3.02441 0.20344 2.88069 18 - -
51997 1.38629 1.38629 1.38629 1.38629
51998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
51999 19 2.81865 0.23582 2.88868 2.35662 19 - -
52000 1.38629 1.38629 1.38629 1.38629
52001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52002 20 2.53331 3.02441 0.20344 2.88069 20 - -
52003 1.38629 1.38629 1.38629 1.38629
52004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52005 21 2.57915 2.25909 2.64442 0.28946 21 - -
52006 1.38629 1.38629 1.38629 1.38629
52007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52008 22 2.53331 3.02441 0.20344 2.88069 22 - -
52009 1.38629 1.38629 1.38629 1.38629
52010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52011 23 0.23862 2.84929 2.43386 2.70756 23 - -
52012 1.38629 1.38629 1.38629 1.38629
52013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52014 24 2.53331 3.02441 0.20344 2.88069 24 - -
52015 1.38629 1.38629 1.38629 1.38629
52016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52017 25 2.57915 2.25909 2.64442 0.28946 25 - -
52018 1.38629 1.38629 1.38629 1.38629
52019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52020 26 0.23862 2.84929 2.43386 2.70756 26 - -
52021 1.38629 1.38629 1.38629 1.38629
52022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52023 27 2.81865 0.23582 2.88868 2.35662 27 - -
52024 1.38629 1.38629 1.38629 1.38629
52025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52026 28 2.81865 0.23582 2.88868 2.35662 28 - -
52027 1.38629 1.38629 1.38629 1.38629
52028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52029 29 2.81865 0.23582 2.88868 2.35662 29 - -
52030 1.38629 1.38629 1.38629 1.38629
52031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52032 30 2.53331 3.02441 0.20344 2.88069 30 - -
52033 1.38629 1.38629 1.38629 1.38629
52034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52035 31 2.81865 0.23582 2.88868 2.35662 31 - -
52036 1.38629 1.38629 1.38629 1.38629
52037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52038 32 2.57915 2.25909 2.64442 0.28946 32 - -
52039 1.38629 1.38629 1.38629 1.38629
52040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52041 33 2.53331 3.02441 0.20344 2.88069 33 - -
52042 1.38629 1.38629 1.38629 1.38629
52043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52044 34 0.23862 2.84929 2.43386 2.70756 34 - -
52045 1.38629 1.38629 1.38629 1.38629
52046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52047 35 0.23862 2.84929 2.43386 2.70756 35 - -
52048 1.38629 1.38629 1.38629 1.38629
52049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52050 36 2.81865 0.23582 2.88868 2.35662 36 - -
52051 1.38629 1.38629 1.38629 1.38629
52052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52053 37 2.57915 2.25909 2.64442 0.28946 37 - -
52054 1.38629 1.38629 1.38629 1.38629
52055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52056 38 2.57915 2.25909 2.64442 0.28946 38 - -
52057 1.38629 1.38629 1.38629 1.38629
52058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52059 39 0.23862 2.84929 2.43386 2.70756 39 - -
52060 1.38629 1.38629 1.38629 1.38629
52061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52062 40 0.23862 2.84929 2.43386 2.70756 40 - -
52063 1.38629 1.38629 1.38629 1.38629
52064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52065 41 2.53331 3.02441 0.20344 2.88069 41 - -
52066 1.38629 1.38629 1.38629 1.38629
52067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52068 42 2.81865 0.23582 2.88868 2.35662 42 - -
52069 1.38629 1.38629 1.38629 1.38629
52070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52071 43 0.23862 2.84929 2.43386 2.70756 43 - -
52072 1.38629 1.38629 1.38629 1.38629
52073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52074 44 2.57915 2.25909 2.64442 0.28946 44 - -
52075 1.38629 1.38629 1.38629 1.38629
52076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52077 45 0.23862 2.84929 2.43386 2.70756 45 - -
52078 1.38629 1.38629 1.38629 1.38629
52079 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
52080 //
52081 HMMER3/b [3.0 | March 2010]
52082 NAME 4_LSU_Metazoa_4_LSU_start_twentyonef_long
52083 LENG 45
52084 ALPH DNA
52085 RF no
52086 CS no
52087 MAP yes
52088 DATE Mon Feb 27 23:00:27 2012
52089 NSEQ 2
52090 EFFN 2.000000
52091 CKSUM 4075013726
52092 STATS LOCAL MSV -7.4346 0.72876
52093 STATS LOCAL VITERBI -8.2677 0.72876
52094 STATS LOCAL FORWARD -3.2579 0.72876
52095 HMM A C G T
52096 m->m m->i m->d i->m i->i d->m d->d
52097 COMPO 1.14531 1.27034 1.71538 1.50850
52098 1.38629 1.38629 1.38629 1.38629
52099 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
52100 1 2.57915 2.25909 2.64442 0.28946 1 - -
52101 1.38629 1.38629 1.38629 1.38629
52102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52103 2 2.57915 2.25909 2.64442 0.28946 2 - -
52104 1.38629 1.38629 1.38629 1.38629
52105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52106 3 0.23862 2.84929 2.43386 2.70756 3 - -
52107 1.38629 1.38629 1.38629 1.38629
52108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52109 4 2.81865 0.23582 2.88868 2.35662 4 - -
52110 1.38629 1.38629 1.38629 1.38629
52111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52112 5 2.53331 3.02441 0.20344 2.88069 5 - -
52113 1.38629 1.38629 1.38629 1.38629
52114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52115 6 0.23862 2.84929 2.43386 2.70756 6 - -
52116 1.38629 1.38629 1.38629 1.38629
52117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52118 7 2.81865 0.23582 2.88868 2.35662 7 - -
52119 1.38629 1.38629 1.38629 1.38629
52120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52121 8 2.81865 0.23582 2.88868 2.35662 8 - -
52122 1.38629 1.38629 1.38629 1.38629
52123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52124 9 2.57915 2.25909 2.64442 0.28946 9 - -
52125 1.38629 1.38629 1.38629 1.38629
52126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52127 10 2.81865 0.23582 2.88868 2.35662 10 - -
52128 1.38629 1.38629 1.38629 1.38629
52129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52130 11 0.23862 2.84929 2.43386 2.70756 11 - -
52131 1.38629 1.38629 1.38629 1.38629
52132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52133 12 0.23862 2.84929 2.43386 2.70756 12 - -
52134 1.38629 1.38629 1.38629 1.38629
52135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52136 13 2.81865 0.23582 2.88868 2.35662 13 - -
52137 1.38629 1.38629 1.38629 1.38629
52138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52139 14 2.57915 2.25909 2.64442 0.28946 14 - -
52140 1.38629 1.38629 1.38629 1.38629
52141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52142 15 2.81865 0.23582 2.88868 2.35662 15 - -
52143 1.38629 1.38629 1.38629 1.38629
52144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52145 16 0.23862 2.84929 2.43386 2.70756 16 - -
52146 1.38629 1.38629 1.38629 1.38629
52147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52148 17 0.23862 2.84929 2.43386 2.70756 17 - -
52149 1.38629 1.38629 1.38629 1.38629
52150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52151 18 2.53331 3.02441 0.20344 2.88069 18 - -
52152 1.38629 1.38629 1.38629 1.38629
52153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52154 19 2.81865 0.23582 2.88868 2.35662 19 - -
52155 1.38629 1.38629 1.38629 1.38629
52156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52157 20 0.23862 2.84929 2.43386 2.70756 20 - -
52158 1.38629 1.38629 1.38629 1.38629
52159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52160 21 0.23862 2.84929 2.43386 2.70756 21 - -
52161 1.38629 1.38629 1.38629 1.38629
52162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52163 22 2.53331 3.02441 0.20344 2.88069 22 - -
52164 1.38629 1.38629 1.38629 1.38629
52165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52166 23 0.23862 2.84929 2.43386 2.70756 23 - -
52167 1.38629 1.38629 1.38629 1.38629
52168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52169 24 2.15554 1.00938 2.23102 0.88601 24 - -
52170 1.38629 1.38629 1.38629 1.38629
52171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52172 25 2.57915 2.25909 2.64442 0.28946 25 - -
52173 1.38629 1.38629 1.38629 1.38629
52174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52175 26 0.23862 2.84929 2.43386 2.70756 26 - -
52176 1.38629 1.38629 1.38629 1.38629
52177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52178 27 2.81865 0.23582 2.88868 2.35662 27 - -
52179 1.38629 1.38629 1.38629 1.38629
52180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52181 28 2.81865 0.23582 2.88868 2.35662 28 - -
52182 1.38629 1.38629 1.38629 1.38629
52183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52184 29 2.81865 0.23582 2.88868 2.35662 29 - -
52185 1.38629 1.38629 1.38629 1.38629
52186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52187 30 2.53331 3.02441 0.20344 2.88069 30 - -
52188 1.38629 1.38629 1.38629 1.38629
52189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52190 31 2.81865 0.23582 2.88868 2.35662 31 - -
52191 1.38629 1.38629 1.38629 1.38629
52192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52193 32 2.57915 2.25909 2.64442 0.28946 32 - -
52194 1.38629 1.38629 1.38629 1.38629
52195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52196 33 2.53331 3.02441 0.20344 2.88069 33 - -
52197 1.38629 1.38629 1.38629 1.38629
52198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52199 34 0.23862 2.84929 2.43386 2.70756 34 - -
52200 1.38629 1.38629 1.38629 1.38629
52201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52202 35 0.23862 2.84929 2.43386 2.70756 35 - -
52203 1.38629 1.38629 1.38629 1.38629
52204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52205 36 2.81865 0.23582 2.88868 2.35662 36 - -
52206 1.38629 1.38629 1.38629 1.38629
52207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52208 37 2.57915 2.25909 2.64442 0.28946 37 - -
52209 1.38629 1.38629 1.38629 1.38629
52210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52211 38 2.57915 2.25909 2.64442 0.28946 38 - -
52212 1.38629 1.38629 1.38629 1.38629
52213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52214 39 0.23862 2.84929 2.43386 2.70756 39 - -
52215 1.38629 1.38629 1.38629 1.38629
52216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52217 40 0.23862 2.84929 2.43386 2.70756 40 - -
52218 1.38629 1.38629 1.38629 1.38629
52219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52220 41 2.53331 3.02441 0.20344 2.88069 41 - -
52221 1.38629 1.38629 1.38629 1.38629
52222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52223 42 2.81865 0.23582 2.88868 2.35662 42 - -
52224 1.38629 1.38629 1.38629 1.38629
52225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52226 43 0.23862 2.84929 2.43386 2.70756 43 - -
52227 1.38629 1.38629 1.38629 1.38629
52228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52229 44 2.57915 2.25909 2.64442 0.28946 44 - -
52230 1.38629 1.38629 1.38629 1.38629
52231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52232 45 0.23862 2.84929 2.43386 2.70756 45 - -
52233 1.38629 1.38629 1.38629 1.38629
52234 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
52235 //
52236 HMMER3/b [3.0 | March 2010]
52237 NAME 4_LSU_Metazoa_4_LSU_start_twentyoneg_long
52238 LENG 45
52239 ALPH DNA
52240 RF no
52241 CS no
52242 MAP yes
52243 DATE Mon Feb 27 23:00:33 2012
52244 NSEQ 2
52245 EFFN 2.000000
52246 CKSUM 1499303294
52247 STATS LOCAL MSV -7.4468 0.72832
52248 STATS LOCAL VITERBI -8.1792 0.72832
52249 STATS LOCAL FORWARD -3.7559 0.72832
52250 HMM A C G T
52251 m->m m->i m->d i->m i->i d->m d->d
52252 COMPO 1.34665 1.28182 1.57176 1.36775
52253 1.38629 1.38629 1.38629 1.38629
52254 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
52255 1 2.57915 2.25909 2.64442 0.28946 1 - -
52256 1.38629 1.38629 1.38629 1.38629
52257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52258 2 2.81865 0.23582 2.88868 2.35662 2 - -
52259 1.38629 1.38629 1.38629 1.38629
52260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52261 3 2.81865 0.23582 2.88868 2.35662 3 - -
52262 1.38629 1.38629 1.38629 1.38629
52263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52264 4 2.57915 2.25909 2.64442 0.28946 4 - -
52265 1.38629 1.38629 1.38629 1.38629
52266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52267 5 2.53331 3.02441 0.20344 2.88069 5 - -
52268 1.38629 1.38629 1.38629 1.38629
52269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52270 6 0.23862 2.84929 2.43386 2.70756 6 - -
52271 1.38629 1.38629 1.38629 1.38629
52272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52273 7 2.81865 0.23582 2.88868 2.35662 7 - -
52274 1.38629 1.38629 1.38629 1.38629
52275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52276 8 2.81865 0.23582 2.88868 2.35662 8 - -
52277 1.38629 1.38629 1.38629 1.38629
52278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52279 9 2.57915 2.25909 2.64442 0.28946 9 - -
52280 1.38629 1.38629 1.38629 1.38629
52281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52282 10 2.81865 0.23582 2.88868 2.35662 10 - -
52283 1.38629 1.38629 1.38629 1.38629
52284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52285 11 2.53331 3.02441 0.20344 2.88069 11 - -
52286 1.38629 1.38629 1.38629 1.38629
52287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52288 12 0.23862 2.84929 2.43386 2.70756 12 - -
52289 1.38629 1.38629 1.38629 1.38629
52290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52291 13 2.57915 2.25909 2.64442 0.28946 13 - -
52292 1.38629 1.38629 1.38629 1.38629
52293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52294 14 2.57915 2.25909 2.64442 0.28946 14 - -
52295 1.38629 1.38629 1.38629 1.38629
52296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52297 15 2.81865 0.23582 2.88868 2.35662 15 - -
52298 1.38629 1.38629 1.38629 1.38629
52299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52300 16 0.23862 2.84929 2.43386 2.70756 16 - -
52301 1.38629 1.38629 1.38629 1.38629
52302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52303 17 0.23862 2.84929 2.43386 2.70756 17 - -
52304 1.38629 1.38629 1.38629 1.38629
52305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52306 18 2.53331 3.02441 0.20344 2.88069 18 - -
52307 1.38629 1.38629 1.38629 1.38629
52308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52309 19 2.81865 0.23582 2.88868 2.35662 19 - -
52310 1.38629 1.38629 1.38629 1.38629
52311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52312 20 2.53331 3.02441 0.20344 2.88069 20 - -
52313 1.38629 1.38629 1.38629 1.38629
52314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52315 21 2.57915 2.25909 2.64442 0.28946 21 - -
52316 1.38629 1.38629 1.38629 1.38629
52317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52318 22 2.53331 3.02441 0.20344 2.88069 22 - -
52319 1.38629 1.38629 1.38629 1.38629
52320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52321 23 0.23862 2.84929 2.43386 2.70756 23 - -
52322 1.38629 1.38629 1.38629 1.38629
52323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52324 24 2.57915 2.25909 2.64442 0.28946 24 - -
52325 1.38629 1.38629 1.38629 1.38629
52326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52327 25 2.57915 2.25909 2.64442 0.28946 25 - -
52328 1.38629 1.38629 1.38629 1.38629
52329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52330 26 0.23862 2.84929 2.43386 2.70756 26 - -
52331 1.38629 1.38629 1.38629 1.38629
52332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52333 27 2.81865 0.23582 2.88868 2.35662 27 - -
52334 1.38629 1.38629 1.38629 1.38629
52335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52336 28 2.81865 0.23582 2.88868 2.35662 28 - -
52337 1.38629 1.38629 1.38629 1.38629
52338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52339 29 2.81865 0.23582 2.88868 2.35662 29 - -
52340 1.38629 1.38629 1.38629 1.38629
52341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52342 30 2.53331 3.02441 0.20344 2.88069 30 - -
52343 1.38629 1.38629 1.38629 1.38629
52344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52345 31 2.81865 0.23582 2.88868 2.35662 31 - -
52346 1.38629 1.38629 1.38629 1.38629
52347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52348 32 2.57915 2.25909 2.64442 0.28946 32 - -
52349 1.38629 1.38629 1.38629 1.38629
52350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52351 33 2.53331 3.02441 0.20344 2.88069 33 - -
52352 1.38629 1.38629 1.38629 1.38629
52353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52354 34 0.23862 2.84929 2.43386 2.70756 34 - -
52355 1.38629 1.38629 1.38629 1.38629
52356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52357 35 0.23862 2.84929 2.43386 2.70756 35 - -
52358 1.38629 1.38629 1.38629 1.38629
52359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52360 36 2.81865 0.23582 2.88868 2.35662 36 - -
52361 1.38629 1.38629 1.38629 1.38629
52362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52363 37 2.57915 2.25909 2.64442 0.28946 37 - -
52364 1.38629 1.38629 1.38629 1.38629
52365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52366 38 2.57915 2.25909 2.64442 0.28946 38 - -
52367 1.38629 1.38629 1.38629 1.38629
52368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52369 39 0.23862 2.84929 2.43386 2.70756 39 - -
52370 1.38629 1.38629 1.38629 1.38629
52371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52372 40 0.23862 2.84929 2.43386 2.70756 40 - -
52373 1.38629 1.38629 1.38629 1.38629
52374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52375 41 2.53331 3.02441 0.20344 2.88069 41 - -
52376 1.38629 1.38629 1.38629 1.38629
52377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52378 42 2.81865 0.23582 2.88868 2.35662 42 - -
52379 1.38629 1.38629 1.38629 1.38629
52380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52381 43 0.23862 2.84929 2.43386 2.70756 43 - -
52382 1.38629 1.38629 1.38629 1.38629
52383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52384 44 2.57915 2.25909 2.64442 0.28946 44 - -
52385 1.38629 1.38629 1.38629 1.38629
52386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
52387 45 0.23862 2.84929 2.43386 2.70756 45 - -
52388 1.38629 1.38629 1.38629 1.38629
52389 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
52390 //
52391 HMMER3/b [3.0 | March 2010]
52392 NAME 4_LSU_Metazoa_4_LSU_start_twentyoneh_long
52393 LENG 45
52394 ALPH DNA
52395 RF no
52396 CS no
52397 MAP yes
52398 DATE Mon Feb 27 23:00:55 2012
52399 NSEQ 17
52400 EFFN 3.490479
52401 CKSUM 2048180296
52402 STATS LOCAL MSV -7.4432 0.71933
52403 STATS LOCAL VITERBI -7.7454 0.71933
52404 STATS LOCAL FORWARD -4.3181 0.71933
52405 HMM A C G T
52406 m->m m->i m->d i->m i->i d->m d->d
52407 COMPO 1.35818 1.20843 1.44293 1.57036
52408 1.38629 1.38629 1.38629 1.38629
52409 0.03578 4.04138 4.04138 1.46634 0.26236 0.00000 *
52410 1 2.86208 2.00642 2.91898 0.28184 1 - -
52411 1.38629 1.38629 1.38629 1.38629
52412 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52413 2 3.49321 0.12326 3.54008 2.87255 2 - -
52414 1.38629 1.38629 1.38629 1.38629
52415 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52416 3 3.49321 0.12326 3.54008 2.87255 3 - -
52417 1.38629 1.38629 1.38629 1.38629
52418 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52419 4 3.49321 0.12326 3.54008 2.87255 4 - -
52420 1.38629 1.38629 1.38629 1.38629
52421 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52422 5 2.24900 3.24331 0.20866 3.12836 5 - -
52423 1.38629 1.38629 1.38629 1.38629
52424 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52425 6 0.54374 2.63770 1.32553 2.49810 6 - -
52426 1.38629 1.38629 1.38629 1.38629
52427 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52428 7 3.49321 0.12326 3.54008 2.87255 7 - -
52429 1.38629 1.38629 1.38629 1.38629
52430 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52431 8 3.49321 0.12326 3.54008 2.87255 8 - -
52432 1.38629 1.38629 1.38629 1.38629
52433 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52434 9 3.14166 2.62884 3.18778 0.17036 9 - -
52435 1.38629 1.38629 1.38629 1.38629
52436 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52437 10 3.49321 0.12326 3.54008 2.87255 10 - -
52438 1.38629 1.38629 1.38629 1.38629
52439 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52440 11 2.98363 3.64050 0.11155 3.55071 11 - -
52441 1.38629 1.38629 1.38629 1.38629
52442 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52443 12 2.98363 3.64050 0.11155 3.55071 12 - -
52444 1.38629 1.38629 1.38629 1.38629
52445 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52446 13 0.13519 3.43251 2.83575 3.33917 13 - -
52447 1.38629 1.38629 1.38629 1.38629
52448 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52449 14 3.14166 2.62884 3.18778 0.17036 14 - -
52450 1.38629 1.38629 1.38629 1.38629
52451 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52452 15 3.04000 0.24307 3.10105 2.09603 15 - -
52453 1.38629 1.38629 1.38629 1.38629
52454 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52455 16 0.13519 3.43251 2.83575 3.33917 16 - -
52456 1.38629 1.38629 1.38629 1.38629
52457 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52458 17 2.98363 3.64050 0.11155 3.55071 17 - -
52459 1.38629 1.38629 1.38629 1.38629
52460 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52461 18 2.98363 3.64050 0.11155 3.55071 18 - -
52462 1.38629 1.38629 1.38629 1.38629
52463 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52464 19 3.03719 0.24407 3.09832 2.09172 19 - -
52465 1.38629 1.38629 1.38629 1.38629
52466 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52467 20 2.98363 3.64050 0.11155 3.55071 20 - -
52468 1.38629 1.38629 1.38629 1.38629
52469 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52470 21 3.14166 2.62884 3.18778 0.17036 21 - -
52471 1.38629 1.38629 1.38629 1.38629
52472 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52473 22 2.98363 3.64050 0.11155 3.55071 22 - -
52474 1.38629 1.38629 1.38629 1.38629
52475 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52476 23 0.13519 3.43251 2.83575 3.33917 23 - -
52477 1.38629 1.38629 1.38629 1.38629
52478 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52479 24 0.13519 3.43251 2.83575 3.33917 24 - -
52480 1.38629 1.38629 1.38629 1.38629
52481 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52482 25 3.14166 2.62884 3.18778 0.17036 25 - -
52483 1.38629 1.38629 1.38629 1.38629
52484 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52485 26 0.13519 3.43251 2.83575 3.33917 26 - -
52486 1.38629 1.38629 1.38629 1.38629
52487 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52488 27 3.49321 0.12326 3.54008 2.87255 27 - -
52489 1.38629 1.38629 1.38629 1.38629
52490 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52491 28 3.49321 0.12326 3.54008 2.87255 28 - -
52492 1.38629 1.38629 1.38629 1.38629
52493 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52494 29 3.49321 0.12326 3.54008 2.87255 29 - -
52495 1.38629 1.38629 1.38629 1.38629
52496 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52497 30 2.98363 3.64050 0.11155 3.55071 30 - -
52498 1.38629 1.38629 1.38629 1.38629
52499 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52500 31 3.49321 0.12326 3.54008 2.87255 31 - -
52501 1.38629 1.38629 1.38629 1.38629
52502 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52503 32 3.14166 2.62884 3.18778 0.17036 32 - -
52504 1.38629 1.38629 1.38629 1.38629
52505 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52506 33 2.98363 3.64050 0.11155 3.55071 33 - -
52507 1.38629 1.38629 1.38629 1.38629
52508 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52509 34 0.13519 3.43251 2.83575 3.33917 34 - -
52510 1.38629 1.38629 1.38629 1.38629
52511 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52512 35 0.13519 3.43251 2.83575 3.33917 35 - -
52513 1.38629 1.38629 1.38629 1.38629
52514 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52515 36 3.49321 0.12326 3.54008 2.87255 36 - -
52516 1.38629 1.38629 1.38629 1.38629
52517 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52518 37 3.14166 2.62884 3.18778 0.17036 37 - -
52519 1.38629 1.38629 1.38629 1.38629
52520 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52521 38 3.14166 2.62884 3.18778 0.17036 38 - -
52522 1.38629 1.38629 1.38629 1.38629
52523 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52524 39 0.13519 3.43251 2.83575 3.33917 39 - -
52525 1.38629 1.38629 1.38629 1.38629
52526 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52527 40 0.13519 3.43251 2.83575 3.33917 40 - -
52528 1.38629 1.38629 1.38629 1.38629
52529 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52530 41 2.98363 3.64050 0.11155 3.55071 41 - -
52531 1.38629 1.38629 1.38629 1.38629
52532 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52533 42 3.49321 0.12326 3.54008 2.87255 42 - -
52534 1.38629 1.38629 1.38629 1.38629
52535 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52536 43 0.13519 3.43251 2.83575 3.33917 43 - -
52537 1.38629 1.38629 1.38629 1.38629
52538 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52539 44 3.14166 2.62884 3.18778 0.17036 44 - -
52540 1.38629 1.38629 1.38629 1.38629
52541 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547
52542 45 0.13519 3.43251 2.83575 3.33917 45 - -
52543 1.38629 1.38629 1.38629 1.38629
52544 0.01805 4.02365 * 1.46634 0.26236 0.00000 *
52545 //
52546 HMMER3/b [3.0 | March 2010]
52547 NAME 4_LSU_Metazoa_4_LSU_start_twentyseven_long
52548 LENG 45
52549 ALPH DNA
52550 RF no
52551 CS no
52552 MAP yes
52553 DATE Mon Feb 27 23:01:42 2012
52554 NSEQ 25
52555 EFFN 3.604126
52556 CKSUM 615754615
52557 STATS LOCAL MSV -7.7339 0.71932
52558 STATS LOCAL VITERBI -7.5405 0.71932
52559 STATS LOCAL FORWARD -4.1531 0.71932
52560 HMM A C G T
52561 m->m m->i m->d i->m i->i d->m d->d
52562 COMPO 1.19991 1.44050 1.62854 1.32518
52563 1.38629 1.38629 1.38629 1.38629
52564 0.03507 4.06115 4.06115 1.46634 0.26236 0.00000 *
52565 1 1.52004 2.24459 2.37189 0.54125 1 - -
52566 1.38629 1.38629 1.38629 1.38629
52567 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52568 2 3.00662 3.67429 0.10812 3.58812 2 - -
52569 1.38629 1.38629 1.38629 1.38629
52570 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52571 3 3.17630 2.65080 3.22106 0.16517 3 - -
52572 1.38629 1.38629 1.38629 1.38629
52573 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52574 4 0.13104 3.46628 2.85752 3.37621 4 - -
52575 1.38629 1.38629 1.38629 1.38629
52576 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52577 5 3.00662 3.67429 0.10812 3.58812 5 - -
52578 1.38629 1.38629 1.38629 1.38629
52579 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52580 6 3.00662 3.67429 0.10812 3.58812 6 - -
52581 1.38629 1.38629 1.38629 1.38629
52582 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52583 7 3.53193 0.11902 3.57709 2.90040 7 - -
52584 1.38629 1.38629 1.38629 1.38629
52585 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52586 8 3.53193 0.11902 3.57709 2.90040 8 - -
52587 1.38629 1.38629 1.38629 1.38629
52588 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52589 9 3.17630 2.65080 3.22106 0.16517 9 - -
52590 1.38629 1.38629 1.38629 1.38629
52591 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52592 10 3.53193 0.11902 3.57709 2.90040 10 - -
52593 1.38629 1.38629 1.38629 1.38629
52594 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52595 11 0.13104 3.46628 2.85752 3.37621 11 - -
52596 1.38629 1.38629 1.38629 1.38629
52597 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52598 12 0.13104 3.46628 2.85752 3.37621 12 - -
52599 1.38629 1.38629 1.38629 1.38629
52600 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52601 13 0.19070 2.81213 2.72186 3.04092 13 - -
52602 1.38629 1.38629 1.38629 1.38629
52603 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52604 14 3.17630 2.65080 3.22106 0.16517 14 - -
52605 1.38629 1.38629 1.38629 1.38629
52606 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52607 15 0.13104 3.46628 2.85752 3.37621 15 - -
52608 1.38629 1.38629 1.38629 1.38629
52609 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52610 16 0.13104 3.46628 2.85752 3.37621 16 - -
52611 1.38629 1.38629 1.38629 1.38629
52612 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52613 17 3.17630 2.65080 3.22106 0.16517 17 - -
52614 1.38629 1.38629 1.38629 1.38629
52615 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52616 18 3.00662 3.67429 0.10812 3.58812 18 - -
52617 1.38629 1.38629 1.38629 1.38629
52618 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52619 19 3.17630 2.65080 3.22106 0.16517 19 - -
52620 1.38629 1.38629 1.38629 1.38629
52621 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52622 20 3.00662 3.67429 0.10812 3.58812 20 - -
52623 1.38629 1.38629 1.38629 1.38629
52624 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52625 21 3.17630 2.65080 3.22106 0.16517 21 - -
52626 1.38629 1.38629 1.38629 1.38629
52627 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52628 22 3.00662 3.67429 0.10812 3.58812 22 - -
52629 1.38629 1.38629 1.38629 1.38629
52630 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52631 23 0.13104 3.46628 2.85752 3.37621 23 - -
52632 1.38629 1.38629 1.38629 1.38629
52633 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52634 24 3.53193 0.11902 3.57709 2.90040 24 - -
52635 1.38629 1.38629 1.38629 1.38629
52636 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52637 25 3.17630 2.65080 3.22106 0.16517 25 - -
52638 1.38629 1.38629 1.38629 1.38629
52639 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52640 26 0.13104 3.46628 2.85752 3.37621 26 - -
52641 1.38629 1.38629 1.38629 1.38629
52642 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52643 27 3.53193 0.11902 3.57709 2.90040 27 - -
52644 1.38629 1.38629 1.38629 1.38629
52645 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52646 28 3.53193 0.11902 3.57709 2.90040 28 - -
52647 1.38629 1.38629 1.38629 1.38629
52648 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52649 29 3.53193 0.11902 3.57709 2.90040 29 - -
52650 1.38629 1.38629 1.38629 1.38629
52651 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52652 30 3.53193 0.11902 3.57709 2.90040 30 - -
52653 1.38629 1.38629 1.38629 1.38629
52654 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52655 31 3.53193 0.11902 3.57709 2.90040 31 - -
52656 1.38629 1.38629 1.38629 1.38629
52657 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52658 32 3.17630 2.65080 3.22106 0.16517 32 - -
52659 1.38629 1.38629 1.38629 1.38629
52660 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52661 33 0.13104 3.46628 2.85752 3.37621 33 - -
52662 1.38629 1.38629 1.38629 1.38629
52663 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52664 34 0.13104 3.46628 2.85752 3.37621 34 - -
52665 1.38629 1.38629 1.38629 1.38629
52666 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52667 35 0.13104 3.46628 2.85752 3.37621 35 - -
52668 1.38629 1.38629 1.38629 1.38629
52669 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52670 36 2.95192 2.13272 3.00566 0.24880 36 - -
52671 1.38629 1.38629 1.38629 1.38629
52672 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52673 37 3.17630 2.65080 3.22106 0.16517 37 - -
52674 1.38629 1.38629 1.38629 1.38629
52675 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52676 38 3.17630 2.65080 3.22106 0.16517 38 - -
52677 1.38629 1.38629 1.38629 1.38629
52678 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52679 39 0.13104 3.46628 2.85752 3.37621 39 - -
52680 1.38629 1.38629 1.38629 1.38629
52681 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52682 40 0.13104 3.46628 2.85752 3.37621 40 - -
52683 1.38629 1.38629 1.38629 1.38629
52684 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52685 41 3.00662 3.67429 0.10812 3.58812 41 - -
52686 1.38629 1.38629 1.38629 1.38629
52687 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52688 42 3.53193 0.11902 3.57709 2.90040 42 - -
52689 1.38629 1.38629 1.38629 1.38629
52690 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52691 43 0.13104 3.46628 2.85752 3.37621 43 - -
52692 1.38629 1.38629 1.38629 1.38629
52693 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52694 44 3.17630 2.65080 3.22106 0.16517 44 - -
52695 1.38629 1.38629 1.38629 1.38629
52696 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547
52697 45 1.94400 2.29353 0.39444 2.50223 45 - -
52698 1.38629 1.38629 1.38629 1.38629
52699 0.01769 4.04378 * 1.46634 0.26236 0.00000 *
52700 //
52701 HMMER3/b [3.0 | March 2010]
52702 NAME 4_LSU_Metazoa_4_LSU_start_twentysix_long
52703 LENG 45
52704 ALPH DNA
52705 RF no
52706 CS no
52707 MAP yes
52708 DATE Mon Feb 27 23:01:34 2012
52709 NSEQ 3
52710 EFFN 3.000000
52711 CKSUM 1148524890
52712 STATS LOCAL MSV -8.0380 0.72036
52713 STATS LOCAL VITERBI -7.7395 0.72036
52714 STATS LOCAL FORWARD -3.7355 0.72036
52715 HMM A C G T
52716 m->m m->i m->d i->m i->i d->m d->d
52717 COMPO 1.33949 1.45941 1.37656 1.37357
52718 1.38629 1.38629 1.38629 1.38629
52719 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
52720 1 2.97980 2.52563 3.03204 0.19727 1 - -
52721 1.38629 1.38629 1.38629 1.38629
52722 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52723 2 2.86982 3.47591 0.13017 3.36931 2 - -
52724 1.38629 1.38629 1.38629 1.38629
52725 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52726 3 2.97980 2.52563 3.03204 0.19727 3 - -
52727 1.38629 1.38629 1.38629 1.38629
52728 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52729 4 3.30705 0.14631 3.36166 2.73626 4 - -
52730 1.38629 1.38629 1.38629 1.38629
52731 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52732 5 2.86982 3.47591 0.13017 3.36931 5 - -
52733 1.38629 1.38629 1.38629 1.38629
52734 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52735 6 0.15719 3.27118 2.73043 3.16274 6 - -
52736 1.38629 1.38629 1.38629 1.38629
52737 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52738 7 3.30705 0.14631 3.36166 2.73626 7 - -
52739 1.38629 1.38629 1.38629 1.38629
52740 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52741 8 3.30705 0.14631 3.36166 2.73626 8 - -
52742 1.38629 1.38629 1.38629 1.38629
52743 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52744 9 2.97980 2.52563 3.03204 0.19727 9 - -
52745 1.38629 1.38629 1.38629 1.38629
52746 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52747 10 3.30705 0.14631 3.36166 2.73626 10 - -
52748 1.38629 1.38629 1.38629 1.38629
52749 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52750 11 2.86982 3.47591 0.13017 3.36931 11 - -
52751 1.38629 1.38629 1.38629 1.38629
52752 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52753 12 2.97980 2.52563 3.03204 0.19727 12 - -
52754 1.38629 1.38629 1.38629 1.38629
52755 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52756 13 2.86982 3.47591 0.13017 3.36931 13 - -
52757 1.38629 1.38629 1.38629 1.38629
52758 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52759 14 2.97980 2.52563 3.03204 0.19727 14 - -
52760 1.38629 1.38629 1.38629 1.38629
52761 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52762 15 2.97980 2.52563 3.03204 0.19727 15 - -
52763 1.38629 1.38629 1.38629 1.38629
52764 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52765 16 0.15719 3.27118 2.73043 3.16274 16 - -
52766 1.38629 1.38629 1.38629 1.38629
52767 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52768 17 2.86982 3.47591 0.13017 3.36931 17 - -
52769 1.38629 1.38629 1.38629 1.38629
52770 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52771 18 2.86982 3.47591 0.13017 3.36931 18 - -
52772 1.38629 1.38629 1.38629 1.38629
52773 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52774 19 2.86982 3.47591 0.13017 3.36931 19 - -
52775 1.38629 1.38629 1.38629 1.38629
52776 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52777 20 2.97980 2.52563 3.03204 0.19727 20 - -
52778 1.38629 1.38629 1.38629 1.38629
52779 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52780 21 0.15719 3.27118 2.73043 3.16274 21 - -
52781 1.38629 1.38629 1.38629 1.38629
52782 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52783 22 2.86982 3.47591 0.13017 3.36931 22 - -
52784 1.38629 1.38629 1.38629 1.38629
52785 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52786 23 0.15719 3.27118 2.73043 3.16274 23 - -
52787 1.38629 1.38629 1.38629 1.38629
52788 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52789 24 2.86982 3.47591 0.13017 3.36931 24 - -
52790 1.38629 1.38629 1.38629 1.38629
52791 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52792 25 2.97980 2.52563 3.03204 0.19727 25 - -
52793 1.38629 1.38629 1.38629 1.38629
52794 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52795 26 0.15719 3.27118 2.73043 3.16274 26 - -
52796 1.38629 1.38629 1.38629 1.38629
52797 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52798 27 3.30705 0.14631 3.36166 2.73626 27 - -
52799 1.38629 1.38629 1.38629 1.38629
52800 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52801 28 3.30705 0.14631 3.36166 2.73626 28 - -
52802 1.38629 1.38629 1.38629 1.38629
52803 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52804 29 3.30705 0.14631 3.36166 2.73626 29 - -
52805 1.38629 1.38629 1.38629 1.38629
52806 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52807 30 2.86982 3.47591 0.13017 3.36931 30 - -
52808 1.38629 1.38629 1.38629 1.38629
52809 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52810 31 3.30705 0.14631 3.36166 2.73626 31 - -
52811 1.38629 1.38629 1.38629 1.38629
52812 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52813 32 3.30705 0.14631 3.36166 2.73626 32 - -
52814 1.38629 1.38629 1.38629 1.38629
52815 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52816 33 0.15719 3.27118 2.73043 3.16274 33 - -
52817 1.38629 1.38629 1.38629 1.38629
52818 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52819 34 0.15719 3.27118 2.73043 3.16274 34 - -
52820 1.38629 1.38629 1.38629 1.38629
52821 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52822 35 0.15719 3.27118 2.73043 3.16274 35 - -
52823 1.38629 1.38629 1.38629 1.38629
52824 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52825 36 2.97980 2.52563 3.03204 0.19727 36 - -
52826 1.38629 1.38629 1.38629 1.38629
52827 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52828 37 2.97980 2.52563 3.03204 0.19727 37 - -
52829 1.38629 1.38629 1.38629 1.38629
52830 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52831 38 2.97980 2.52563 3.03204 0.19727 38 - -
52832 1.38629 1.38629 1.38629 1.38629
52833 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52834 39 0.15719 3.27118 2.73043 3.16274 39 - -
52835 1.38629 1.38629 1.38629 1.38629
52836 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52837 40 0.15719 3.27118 2.73043 3.16274 40 - -
52838 1.38629 1.38629 1.38629 1.38629
52839 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52840 41 2.86982 3.47591 0.13017 3.36931 41 - -
52841 1.38629 1.38629 1.38629 1.38629
52842 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52843 42 3.30705 0.14631 3.36166 2.73626 42 - -
52844 1.38629 1.38629 1.38629 1.38629
52845 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52846 43 0.15719 3.27118 2.73043 3.16274 43 - -
52847 1.38629 1.38629 1.38629 1.38629
52848 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52849 44 2.97980 2.52563 3.03204 0.19727 44 - -
52850 1.38629 1.38629 1.38629 1.38629
52851 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
52852 45 0.15719 3.27118 2.73043 3.16274 45 - -
52853 1.38629 1.38629 1.38629 1.38629
52854 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
52855 //
52856 HMMER3/b [3.0 | March 2010]
52857 NAME 4_LSU_Metazoa_4_LSU_start_twentythree_long
52858 LENG 45
52859 ALPH DNA
52860 RF no
52861 CS no
52862 MAP yes
52863 DATE Mon Feb 27 23:01:11 2012
52864 NSEQ 8
52865 EFFN 3.285156
52866 CKSUM 2607871508
52867 STATS LOCAL MSV -8.2251 0.71933
52868 STATS LOCAL VITERBI -7.5953 0.71933
52869 STATS LOCAL FORWARD -4.0932 0.71933
52870 HMM A C G T
52871 m->m m->i m->d i->m i->i d->m d->d
52872 COMPO 1.16481 1.25871 1.80031 1.43234
52873 1.38629 1.38629 1.38629 1.38629
52874 0.03714 4.00463 4.00463 1.46634 0.26236 0.00000 *
52875 1 0.14350 3.36817 2.79406 3.26870 1 - -
52876 1.38629 1.38629 1.38629 1.38629
52877 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52878 2 3.41917 0.13188 3.46922 2.81884 2 - -
52879 1.38629 1.38629 1.38629 1.38629
52880 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52881 3 0.14350 3.36817 2.79406 3.26870 3 - -
52882 1.38629 1.38629 1.38629 1.38629
52883 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52884 4 3.07642 2.58739 3.12504 0.18065 4 - -
52885 1.38629 1.38629 1.38629 1.38629
52886 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52887 5 0.14350 3.36817 2.79406 3.26870 5 - -
52888 1.38629 1.38629 1.38629 1.38629
52889 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52890 6 2.93908 3.57547 0.11851 3.47887 6 - -
52891 1.38629 1.38629 1.38629 1.38629
52892 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52893 7 3.41917 0.13188 3.46922 2.81884 7 - -
52894 1.38629 1.38629 1.38629 1.38629
52895 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52896 8 3.41917 0.13188 3.46922 2.81884 8 - -
52897 1.38629 1.38629 1.38629 1.38629
52898 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52899 9 3.07642 2.58739 3.12504 0.18065 9 - -
52900 1.38629 1.38629 1.38629 1.38629
52901 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52902 10 3.41917 0.13188 3.46922 2.81884 10 - -
52903 1.38629 1.38629 1.38629 1.38629
52904 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52905 11 0.14350 3.36817 2.79406 3.26870 11 - -
52906 1.38629 1.38629 1.38629 1.38629
52907 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52908 12 0.14350 3.36817 2.79406 3.26870 12 - -
52909 1.38629 1.38629 1.38629 1.38629
52910 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52911 13 3.41917 0.13188 3.46922 2.81884 13 - -
52912 1.38629 1.38629 1.38629 1.38629
52913 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52914 14 3.07642 2.58739 3.12504 0.18065 14 - -
52915 1.38629 1.38629 1.38629 1.38629
52916 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52917 15 3.41917 0.13188 3.46922 2.81884 15 - -
52918 1.38629 1.38629 1.38629 1.38629
52919 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52920 16 0.14350 3.36817 2.79406 3.26870 16 - -
52921 1.38629 1.38629 1.38629 1.38629
52922 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52923 17 3.07642 2.58739 3.12504 0.18065 17 - -
52924 1.38629 1.38629 1.38629 1.38629
52925 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52926 18 2.93908 3.57547 0.11851 3.47887 18 - -
52927 1.38629 1.38629 1.38629 1.38629
52928 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52929 19 3.07642 2.58739 3.12504 0.18065 19 - -
52930 1.38629 1.38629 1.38629 1.38629
52931 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52932 20 2.93908 3.57547 0.11851 3.47887 20 - -
52933 1.38629 1.38629 1.38629 1.38629
52934 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52935 21 0.14350 3.36817 2.79406 3.26870 21 - -
52936 1.38629 1.38629 1.38629 1.38629
52937 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52938 22 2.93908 3.57547 0.11851 3.47887 22 - -
52939 1.38629 1.38629 1.38629 1.38629
52940 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52941 23 0.14350 3.36817 2.79406 3.26870 23 - -
52942 1.38629 1.38629 1.38629 1.38629
52943 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52944 24 3.41917 0.13188 3.46922 2.81884 24 - -
52945 1.38629 1.38629 1.38629 1.38629
52946 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52947 25 3.07642 2.58739 3.12504 0.18065 25 - -
52948 1.38629 1.38629 1.38629 1.38629
52949 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52950 26 0.14350 3.36817 2.79406 3.26870 26 - -
52951 1.38629 1.38629 1.38629 1.38629
52952 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52953 27 3.41917 0.13188 3.46922 2.81884 27 - -
52954 1.38629 1.38629 1.38629 1.38629
52955 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52956 28 3.41917 0.13188 3.46922 2.81884 28 - -
52957 1.38629 1.38629 1.38629 1.38629
52958 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52959 29 3.41917 0.13188 3.46922 2.81884 29 - -
52960 1.38629 1.38629 1.38629 1.38629
52961 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52962 30 3.41917 0.13188 3.46922 2.81884 30 - -
52963 1.38629 1.38629 1.38629 1.38629
52964 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52965 31 3.41917 0.13188 3.46922 2.81884 31 - -
52966 1.38629 1.38629 1.38629 1.38629
52967 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52968 32 3.07642 2.58739 3.12504 0.18065 32 - -
52969 1.38629 1.38629 1.38629 1.38629
52970 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52971 33 2.93908 3.57547 0.11851 3.47887 33 - -
52972 1.38629 1.38629 1.38629 1.38629
52973 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52974 34 0.14350 3.36817 2.79406 3.26870 34 - -
52975 1.38629 1.38629 1.38629 1.38629
52976 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52977 35 0.14350 3.36817 2.79406 3.26870 35 - -
52978 1.38629 1.38629 1.38629 1.38629
52979 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52980 36 3.07642 2.58739 3.12504 0.18065 36 - -
52981 1.38629 1.38629 1.38629 1.38629
52982 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52983 37 3.07642 2.58739 3.12504 0.18065 37 - -
52984 1.38629 1.38629 1.38629 1.38629
52985 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52986 38 3.07642 2.58739 3.12504 0.18065 38 - -
52987 1.38629 1.38629 1.38629 1.38629
52988 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52989 39 0.14350 3.36817 2.79406 3.26870 39 - -
52990 1.38629 1.38629 1.38629 1.38629
52991 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52992 40 0.14350 3.36817 2.79406 3.26870 40 - -
52993 1.38629 1.38629 1.38629 1.38629
52994 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52995 41 2.93908 3.57547 0.11851 3.47887 41 - -
52996 1.38629 1.38629 1.38629 1.38629
52997 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
52998 42 3.41917 0.13188 3.46922 2.81884 42 - -
52999 1.38629 1.38629 1.38629 1.38629
53000 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
53001 43 0.14350 3.36817 2.79406 3.26870 43 - -
53002 1.38629 1.38629 1.38629 1.38629
53003 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
53004 44 3.07642 2.58739 3.12504 0.18065 44 - -
53005 1.38629 1.38629 1.38629 1.38629
53006 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547
53007 45 0.14350 3.36817 2.79406 3.26870 45 - -
53008 1.38629 1.38629 1.38629 1.38629
53009 0.01874 3.98623 * 1.46634 0.26236 0.00000 *
53010 //
53011 HMMER3/b [3.0 | March 2010]
53012 NAME 4_LSU_Metazoa_4_LSU_start_twentytwo_long
53013 LENG 45
53014 ALPH DNA
53015 RF no
53016 CS no
53017 MAP yes
53018 DATE Mon Feb 27 23:01:03 2012
53019 NSEQ 5
53020 EFFN 3.559570
53021 CKSUM 3915778671
53022 STATS LOCAL MSV -7.9350 0.71931
53023 STATS LOCAL VITERBI -7.3801 0.71931
53024 STATS LOCAL FORWARD -4.1967 0.71931
53025 HMM A C G T
53026 m->m m->i m->d i->m i->i d->m d->d
53027 COMPO 1.08783 1.29601 1.90713 1.42327
53028 1.38629 1.38629 1.38629 1.38629
53029 0.03534 4.05345 4.05345 1.46634 0.26236 0.00000 *
53030 1 0.13263 3.45319 2.84909 3.36185 1 - -
53031 1.38629 1.38629 1.38629 1.38629
53032 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53033 2 1.15878 2.17074 2.22351 0.76828 2 - -
53034 1.38629 1.38629 1.38629 1.38629
53035 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53036 3 0.13263 3.45319 2.84909 3.36185 3 - -
53037 1.38629 1.38629 1.38629 1.38629
53038 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53039 4 3.51693 0.12064 3.56276 2.88963 4 - -
53040 1.38629 1.38629 1.38629 1.38629
53041 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53042 5 0.13263 3.45319 2.84909 3.36185 5 - -
53043 1.38629 1.38629 1.38629 1.38629
53044 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53045 6 0.13263 3.45319 2.84909 3.36185 6 - -
53046 1.38629 1.38629 1.38629 1.38629
53047 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53048 7 3.51693 0.12064 3.56276 2.88963 7 - -
53049 1.38629 1.38629 1.38629 1.38629
53050 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53051 8 3.51693 0.12064 3.56276 2.88963 8 - -
53052 1.38629 1.38629 1.38629 1.38629
53053 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53054 9 3.16284 2.64227 3.20813 0.16716 9 - -
53055 1.38629 1.38629 1.38629 1.38629
53056 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53057 10 3.51693 0.12064 3.56276 2.88963 10 - -
53058 1.38629 1.38629 1.38629 1.38629
53059 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53060 11 0.13263 3.45319 2.84909 3.36185 11 - -
53061 1.38629 1.38629 1.38629 1.38629
53062 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53063 12 0.13263 3.45319 2.84909 3.36185 12 - -
53064 1.38629 1.38629 1.38629 1.38629
53065 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53066 13 3.51693 0.12064 3.56276 2.88963 13 - -
53067 1.38629 1.38629 1.38629 1.38629
53068 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53069 14 3.16284 2.64227 3.20813 0.16716 14 - -
53070 1.38629 1.38629 1.38629 1.38629
53071 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53072 15 3.51693 0.12064 3.56276 2.88963 15 - -
53073 1.38629 1.38629 1.38629 1.38629
53074 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53075 16 0.13263 3.45319 2.84909 3.36185 16 - -
53076 1.38629 1.38629 1.38629 1.38629
53077 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53078 17 3.16284 2.64227 3.20813 0.16716 17 - -
53079 1.38629 1.38629 1.38629 1.38629
53080 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53081 18 0.13263 3.45319 2.84909 3.36185 18 - -
53082 1.38629 1.38629 1.38629 1.38629
53083 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53084 19 3.16284 2.64227 3.20813 0.16716 19 - -
53085 1.38629 1.38629 1.38629 1.38629
53086 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53087 20 2.99774 3.66122 0.10943 3.57364 20 - -
53088 1.38629 1.38629 1.38629 1.38629
53089 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53090 21 2.99774 3.66122 0.10943 3.57364 21 - -
53091 1.38629 1.38629 1.38629 1.38629
53092 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53093 22 2.99774 3.66122 0.10943 3.57364 22 - -
53094 1.38629 1.38629 1.38629 1.38629
53095 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53096 23 0.13263 3.45319 2.84909 3.36185 23 - -
53097 1.38629 1.38629 1.38629 1.38629
53098 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53099 24 2.48941 1.18066 2.55916 0.62999 24 - -
53100 1.38629 1.38629 1.38629 1.38629
53101 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53102 25 3.16284 2.64227 3.20813 0.16716 25 - -
53103 1.38629 1.38629 1.38629 1.38629
53104 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53105 26 0.13263 3.45319 2.84909 3.36185 26 - -
53106 1.38629 1.38629 1.38629 1.38629
53107 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53108 27 3.51693 0.12064 3.56276 2.88963 27 - -
53109 1.38629 1.38629 1.38629 1.38629
53110 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53111 28 3.51693 0.12064 3.56276 2.88963 28 - -
53112 1.38629 1.38629 1.38629 1.38629
53113 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53114 29 3.51693 0.12064 3.56276 2.88963 29 - -
53115 1.38629 1.38629 1.38629 1.38629
53116 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53117 30 3.51693 0.12064 3.56276 2.88963 30 - -
53118 1.38629 1.38629 1.38629 1.38629
53119 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53120 31 3.51693 0.12064 3.56276 2.88963 31 - -
53121 1.38629 1.38629 1.38629 1.38629
53122 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53123 32 3.16284 2.64227 3.20813 0.16716 32 - -
53124 1.38629 1.38629 1.38629 1.38629
53125 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53126 33 2.99774 3.66122 0.10943 3.57364 33 - -
53127 1.38629 1.38629 1.38629 1.38629
53128 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53129 34 0.13263 3.45319 2.84909 3.36185 34 - -
53130 1.38629 1.38629 1.38629 1.38629
53131 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53132 35 0.13263 3.45319 2.84909 3.36185 35 - -
53133 1.38629 1.38629 1.38629 1.38629
53134 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53135 36 3.16284 2.64227 3.20813 0.16716 36 - -
53136 1.38629 1.38629 1.38629 1.38629
53137 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53138 37 3.16284 2.64227 3.20813 0.16716 37 - -
53139 1.38629 1.38629 1.38629 1.38629
53140 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53141 38 3.16284 2.64227 3.20813 0.16716 38 - -
53142 1.38629 1.38629 1.38629 1.38629
53143 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53144 39 0.13263 3.45319 2.84909 3.36185 39 - -
53145 1.38629 1.38629 1.38629 1.38629
53146 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53147 40 0.13263 3.45319 2.84909 3.36185 40 - -
53148 1.38629 1.38629 1.38629 1.38629
53149 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53150 41 2.99774 3.66122 0.10943 3.57364 41 - -
53151 1.38629 1.38629 1.38629 1.38629
53152 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53153 42 3.51693 0.12064 3.56276 2.88963 42 - -
53154 1.38629 1.38629 1.38629 1.38629
53155 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53156 43 0.13263 3.45319 2.84909 3.36185 43 - -
53157 1.38629 1.38629 1.38629 1.38629
53158 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53159 44 3.16284 2.64227 3.20813 0.16716 44 - -
53160 1.38629 1.38629 1.38629 1.38629
53161 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
53162 45 0.13263 3.45319 2.84909 3.36185 45 - -
53163 1.38629 1.38629 1.38629 1.38629
53164 0.01783 4.03593 * 1.46634 0.26236 0.00000 *
53165 //
53166 HMMER3/b [3.0 | March 2010]
53167 NAME 4_LSU_Metazoa_4_LSU_start_two_long
53168 LENG 45
53169 ALPH DNA
53170 RF no
53171 CS no
53172 MAP yes
53173 DATE Mon Feb 27 22:49:34 2012
53174 NSEQ 24
53175 EFFN 4.110352
53176 CKSUM 3861060913
53177 STATS LOCAL MSV -7.2757 0.71932
53178 STATS LOCAL VITERBI -7.5425 0.71932
53179 STATS LOCAL FORWARD -4.1954 0.71932
53180 HMM A C G T
53181 m->m m->i m->d i->m i->i d->m d->d
53182 COMPO 1.24577 1.38621 1.49131 1.43893
53183 1.38629 1.38629 1.38629 1.38629
53184 0.03221 4.14478 4.14478 1.46634 0.26236 0.00000 *
53185 1 2.52986 2.30029 2.91720 0.26655 1 - -
53186 1.38629 1.38629 1.38629 1.38629
53187 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53188 2 2.55091 1.00702 2.62071 0.72581 2 - -
53189 1.38629 1.38629 1.38629 1.38629
53190 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53191 3 2.84685 1.70365 2.90630 0.34916 3 - -
53192 1.38629 1.38629 1.38629 1.38629
53193 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53194 4 3.31876 2.74119 3.35792 0.14560 4 - -
53195 1.38629 1.38629 1.38629 1.38629
53196 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53197 5 3.09695 3.80803 0.09565 3.73654 5 - -
53198 1.38629 1.38629 1.38629 1.38629
53199 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53200 6 0.11574 3.60237 2.94493 3.52575 6 - -
53201 1.38629 1.38629 1.38629 1.38629
53202 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53203 7 3.68657 0.10364 3.72466 3.01034 7 - -
53204 1.38629 1.38629 1.38629 1.38629
53205 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53206 8 3.68657 0.10364 3.72466 3.01034 8 - -
53207 1.38629 1.38629 1.38629 1.38629
53208 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53209 9 3.31876 2.74119 3.35792 0.14560 9 - -
53210 1.38629 1.38629 1.38629 1.38629
53211 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53212 10 2.20818 0.75168 1.22058 2.09179 10 - -
53213 1.38629 1.38629 1.38629 1.38629
53214 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53215 11 0.11574 3.60237 2.94493 3.52575 11 - -
53216 1.38629 1.38629 1.38629 1.38629
53217 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53218 12 3.09695 3.80803 0.09565 3.73654 12 - -
53219 1.38629 1.38629 1.38629 1.38629
53220 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53221 13 0.11574 3.60237 2.94493 3.52575 13 - -
53222 1.38629 1.38629 1.38629 1.38629
53223 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53224 14 2.24775 2.24807 1.22321 0.70426 14 - -
53225 1.38629 1.38629 1.38629 1.38629
53226 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53227 15 3.68657 0.10364 3.72466 3.01034 15 - -
53228 1.38629 1.38629 1.38629 1.38629
53229 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53230 16 0.11574 3.60237 2.94493 3.52575 16 - -
53231 1.38629 1.38629 1.38629 1.38629
53232 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53233 17 3.09695 3.80803 0.09565 3.73654 17 - -
53234 1.38629 1.38629 1.38629 1.38629
53235 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53236 18 3.09695 3.80803 0.09565 3.73654 18 - -
53237 1.38629 1.38629 1.38629 1.38629
53238 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53239 19 3.68657 0.10364 3.72466 3.01034 19 - -
53240 1.38629 1.38629 1.38629 1.38629
53241 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53242 20 0.11574 3.60237 2.94493 3.52575 20 - -
53243 1.38629 1.38629 1.38629 1.38629
53244 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53245 21 0.11574 3.60237 2.94493 3.52575 21 - -
53246 1.38629 1.38629 1.38629 1.38629
53247 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53248 22 3.09695 3.80803 0.09565 3.73654 22 - -
53249 1.38629 1.38629 1.38629 1.38629
53250 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53251 23 2.00849 3.22105 0.24712 3.10445 23 - -
53252 1.38629 1.38629 1.38629 1.38629
53253 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53254 24 3.03663 0.27971 3.09824 1.89132 24 - -
53255 1.38629 1.38629 1.38629 1.38629
53256 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53257 25 3.31876 2.74119 3.35792 0.14560 25 - -
53258 1.38629 1.38629 1.38629 1.38629
53259 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53260 26 0.11574 3.60237 2.94493 3.52575 26 - -
53261 1.38629 1.38629 1.38629 1.38629
53262 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53263 27 3.68657 0.10364 3.72466 3.01034 27 - -
53264 1.38629 1.38629 1.38629 1.38629
53265 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53266 28 3.68657 0.10364 3.72466 3.01034 28 - -
53267 1.38629 1.38629 1.38629 1.38629
53268 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53269 29 3.68657 0.10364 3.72466 3.01034 29 - -
53270 1.38629 1.38629 1.38629 1.38629
53271 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53272 30 3.09695 3.80803 0.09565 3.73654 30 - -
53273 1.38629 1.38629 1.38629 1.38629
53274 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53275 31 3.68657 0.10364 3.72466 3.01034 31 - -
53276 1.38629 1.38629 1.38629 1.38629
53277 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53278 32 3.31876 2.74119 3.35792 0.14560 32 - -
53279 1.38629 1.38629 1.38629 1.38629
53280 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53281 33 3.09695 3.80803 0.09565 3.73654 33 - -
53282 1.38629 1.38629 1.38629 1.38629
53283 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53284 34 0.11574 3.60237 2.94493 3.52575 34 - -
53285 1.38629 1.38629 1.38629 1.38629
53286 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53287 35 0.11574 3.60237 2.94493 3.52575 35 - -
53288 1.38629 1.38629 1.38629 1.38629
53289 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53290 36 2.99452 1.98351 3.04820 0.26800 36 - -
53291 1.38629 1.38629 1.38629 1.38629
53292 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53293 37 3.31876 2.74119 3.35792 0.14560 37 - -
53294 1.38629 1.38629 1.38629 1.38629
53295 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53296 38 3.31876 2.74119 3.35792 0.14560 38 - -
53297 1.38629 1.38629 1.38629 1.38629
53298 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53299 39 0.11574 3.60237 2.94493 3.52575 39 - -
53300 1.38629 1.38629 1.38629 1.38629
53301 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53302 40 0.11574 3.60237 2.94493 3.52575 40 - -
53303 1.38629 1.38629 1.38629 1.38629
53304 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53305 41 3.09695 3.80803 0.09565 3.73654 41 - -
53306 1.38629 1.38629 1.38629 1.38629
53307 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53308 42 3.68657 0.10364 3.72466 3.01034 42 - -
53309 1.38629 1.38629 1.38629 1.38629
53310 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53311 43 0.11574 3.60237 2.94493 3.52575 43 - -
53312 1.38629 1.38629 1.38629 1.38629
53313 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53314 44 3.31876 2.74119 3.35792 0.14560 44 - -
53315 1.38629 1.38629 1.38629 1.38629
53316 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547
53317 45 0.11574 3.60237 2.94493 3.52575 45 - -
53318 1.38629 1.38629 1.38629 1.38629
53319 0.01623 4.12880 * 1.46634 0.26236 0.00000 *
53320 //
53321 HMMER3/b [3.0 | March 2010]
53322 NAME 1_SSU_Metazoa_1_SSU_end_eight_long
53323 LENG 45
53324 ALPH DNA
53325 RF no
53326 CS no
53327 MAP yes
53328 DATE Sun Feb 19 01:27:41 2012
53329 NSEQ 16
53330 EFFN 3.191406
53331 CKSUM 2446389716
53332 STATS LOCAL MSV -8.0800 0.71932
53333 STATS LOCAL VITERBI -7.7749 0.71932
53334 STATS LOCAL FORWARD -4.3446 0.71932
53335 HMM A C G T
53336 m->m m->i m->d i->m i->i d->m d->d
53337 COMPO 1.33411 1.54690 1.19059 1.51568
53338 1.38629 1.38629 1.38629 1.38629
53339 0.03780 3.98739 3.98739 1.46634 0.26236 0.00000 *
53340 1 0.14770 3.33730 2.77393 3.23493 1 - -
53341 1.38629 1.38629 1.38629 1.38629
53342 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53343 2 2.91732 3.54398 0.12206 3.44415 2 - -
53344 1.38629 1.38629 1.38629 1.38629
53345 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53346 3 3.04545 2.56765 3.09524 0.18579 3 - -
53347 1.38629 1.38629 1.38629 1.38629
53348 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53349 4 3.38354 0.13628 3.43507 2.79277 4 - -
53350 1.38629 1.38629 1.38629 1.38629
53351 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53352 5 2.91732 3.54398 0.12206 3.44415 5 - -
53353 1.38629 1.38629 1.38629 1.38629
53354 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53355 6 3.04545 2.56765 3.09524 0.18579 6 - -
53356 1.38629 1.38629 1.38629 1.38629
53357 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53358 7 0.14770 3.33730 2.77393 3.23493 7 - -
53359 1.38629 1.38629 1.38629 1.38629
53360 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53361 8 0.14770 3.33730 2.77393 3.23493 8 - -
53362 1.38629 1.38629 1.38629 1.38629
53363 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53364 9 3.38354 0.13628 3.43507 2.79277 9 - -
53365 1.38629 1.38629 1.38629 1.38629
53366 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53367 10 0.14770 3.33730 2.77393 3.23493 10 - -
53368 1.38629 1.38629 1.38629 1.38629
53369 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53370 11 0.14770 3.33730 2.77393 3.23493 11 - -
53371 1.38629 1.38629 1.38629 1.38629
53372 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53373 12 2.91732 3.54398 0.12206 3.44415 12 - -
53374 1.38629 1.38629 1.38629 1.38629
53375 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53376 13 2.91732 3.54398 0.12206 3.44415 13 - -
53377 1.38629 1.38629 1.38629 1.38629
53378 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53379 14 3.04545 2.56765 3.09524 0.18579 14 - -
53380 1.38629 1.38629 1.38629 1.38629
53381 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53382 15 0.14770 3.33730 2.77393 3.23493 15 - -
53383 1.38629 1.38629 1.38629 1.38629
53384 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53385 16 3.38354 0.13628 3.43507 2.79277 16 - -
53386 1.38629 1.38629 1.38629 1.38629
53387 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53388 17 3.38354 0.13628 3.43507 2.79277 17 - -
53389 1.38629 1.38629 1.38629 1.38629
53390 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53391 18 3.04545 2.56765 3.09524 0.18579 18 - -
53392 1.38629 1.38629 1.38629 1.38629
53393 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53394 19 2.91732 3.54398 0.12206 3.44415 19 - -
53395 1.38629 1.38629 1.38629 1.38629
53396 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53397 20 3.04545 2.56765 3.09524 0.18579 20 - -
53398 1.38629 1.38629 1.38629 1.38629
53399 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53400 21 0.14770 3.33730 2.77393 3.23493 21 - -
53401 1.38629 1.38629 1.38629 1.38629
53402 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53403 22 2.91732 3.54398 0.12206 3.44415 22 - -
53404 1.38629 1.38629 1.38629 1.38629
53405 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53406 23 2.91732 3.54398 0.12206 3.44415 23 - -
53407 1.38629 1.38629 1.38629 1.38629
53408 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53409 24 3.04545 2.56765 3.09524 0.18579 24 - -
53410 1.38629 1.38629 1.38629 1.38629
53411 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53412 25 2.91732 3.54398 0.12206 3.44415 25 - -
53413 1.38629 1.38629 1.38629 1.38629
53414 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53415 26 0.14770 3.33730 2.77393 3.23493 26 - -
53416 1.38629 1.38629 1.38629 1.38629
53417 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53418 27 0.14770 3.33730 2.77393 3.23493 27 - -
53419 1.38629 1.38629 1.38629 1.38629
53420 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53421 28 3.38354 0.13628 3.43507 2.79277 28 - -
53422 1.38629 1.38629 1.38629 1.38629
53423 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53424 29 3.38354 0.13628 3.43507 2.79277 29 - -
53425 1.38629 1.38629 1.38629 1.38629
53426 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53427 30 3.04545 2.56765 3.09524 0.18579 30 - -
53428 1.38629 1.38629 1.38629 1.38629
53429 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53430 31 2.91732 3.54398 0.12206 3.44415 31 - -
53431 1.38629 1.38629 1.38629 1.38629
53432 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53433 32 3.38354 0.13628 3.43507 2.79277 32 - -
53434 1.38629 1.38629 1.38629 1.38629
53435 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53436 33 0.14770 3.33730 2.77393 3.23493 33 - -
53437 1.38629 1.38629 1.38629 1.38629
53438 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53439 34 2.91732 3.54398 0.12206 3.44415 34 - -
53440 1.38629 1.38629 1.38629 1.38629
53441 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53442 35 2.91732 3.54398 0.12206 3.44415 35 - -
53443 1.38629 1.38629 1.38629 1.38629
53444 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53445 36 3.04545 2.56765 3.09524 0.18579 36 - -
53446 1.38629 1.38629 1.38629 1.38629
53447 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53448 37 2.91732 3.54398 0.12206 3.44415 37 - -
53449 1.38629 1.38629 1.38629 1.38629
53450 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53451 38 2.91732 3.54398 0.12206 3.44415 38 - -
53452 1.38629 1.38629 1.38629 1.38629
53453 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53454 39 0.14770 3.33730 2.77393 3.23493 39 - -
53455 1.38629 1.38629 1.38629 1.38629
53456 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53457 40 3.04545 2.56765 3.09524 0.18579 40 - -
53458 1.38629 1.38629 1.38629 1.38629
53459 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53460 41 3.38354 0.13628 3.43507 2.79277 41 - -
53461 1.38629 1.38629 1.38629 1.38629
53462 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53463 42 0.14770 3.33730 2.77393 3.23493 42 - -
53464 1.38629 1.38629 1.38629 1.38629
53465 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53466 43 3.04545 2.56765 3.09524 0.18579 43 - -
53467 1.38629 1.38629 1.38629 1.38629
53468 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53469 44 3.38354 0.13628 3.43507 2.79277 44 - -
53470 1.38629 1.38629 1.38629 1.38629
53471 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
53472 45 2.91732 3.54398 0.12206 3.44415 45 - -
53473 1.38629 1.38629 1.38629 1.38629
53474 0.01908 3.96867 * 1.46634 0.26236 0.00000 *
53475 //
53476 HMMER3/b [3.0 | March 2010]
53477 NAME 1_SSU_Metazoa_1_SSU_end_eleven_long
53478 LENG 45
53479 ALPH DNA
53480 RF no
53481 CS no
53482 MAP yes
53483 DATE Sun Feb 19 01:28:00 2012
53484 NSEQ 10
53485 EFFN 3.208008
53486 CKSUM 3737760971
53487 STATS LOCAL MSV -8.0645 0.71933
53488 STATS LOCAL VITERBI -7.5468 0.71933
53489 STATS LOCAL FORWARD -4.2182 0.71933
53490 HMM A C G T
53491 m->m m->i m->d i->m i->i d->m d->d
53492 COMPO 1.39966 1.54309 1.19163 1.44446
53493 1.38629 1.38629 1.38629 1.38629
53494 0.03768 3.99047 3.99047 1.46634 0.26236 0.00000 *
53495 1 0.14694 3.34284 2.77755 3.24098 1 - -
53496 1.38629 1.38629 1.38629 1.38629
53497 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53498 2 2.92124 3.54964 0.12142 3.45039 2 - -
53499 1.38629 1.38629 1.38629 1.38629
53500 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53501 3 3.05099 2.57118 3.10057 0.18486 3 - -
53502 1.38629 1.38629 1.38629 1.38629
53503 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53504 4 3.38993 0.13548 3.44120 2.79746 4 - -
53505 1.38629 1.38629 1.38629 1.38629
53506 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53507 5 2.92124 3.54964 0.12142 3.45039 5 - -
53508 1.38629 1.38629 1.38629 1.38629
53509 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53510 6 3.05099 2.57118 3.10057 0.18486 6 - -
53511 1.38629 1.38629 1.38629 1.38629
53512 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53513 7 0.14694 3.34284 2.77755 3.24098 7 - -
53514 1.38629 1.38629 1.38629 1.38629
53515 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53516 8 0.14694 3.34284 2.77755 3.24098 8 - -
53517 1.38629 1.38629 1.38629 1.38629
53518 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53519 9 3.38993 0.13548 3.44120 2.79746 9 - -
53520 1.38629 1.38629 1.38629 1.38629
53521 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53522 10 0.14694 3.34284 2.77755 3.24098 10 - -
53523 1.38629 1.38629 1.38629 1.38629
53524 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53525 11 0.14694 3.34284 2.77755 3.24098 11 - -
53526 1.38629 1.38629 1.38629 1.38629
53527 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53528 12 2.92124 3.54964 0.12142 3.45039 12 - -
53529 1.38629 1.38629 1.38629 1.38629
53530 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53531 13 2.92124 3.54964 0.12142 3.45039 13 - -
53532 1.38629 1.38629 1.38629 1.38629
53533 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53534 14 3.05099 2.57118 3.10057 0.18486 14 - -
53535 1.38629 1.38629 1.38629 1.38629
53536 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53537 15 2.92124 3.54964 0.12142 3.45039 15 - -
53538 1.38629 1.38629 1.38629 1.38629
53539 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53540 16 2.92124 3.54964 0.12142 3.45039 16 - -
53541 1.38629 1.38629 1.38629 1.38629
53542 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53543 17 3.38993 0.13548 3.44120 2.79746 17 - -
53544 1.38629 1.38629 1.38629 1.38629
53545 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53546 18 3.05099 2.57118 3.10057 0.18486 18 - -
53547 1.38629 1.38629 1.38629 1.38629
53548 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53549 19 2.92124 3.54964 0.12142 3.45039 19 - -
53550 1.38629 1.38629 1.38629 1.38629
53551 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53552 20 3.05099 2.57118 3.10057 0.18486 20 - -
53553 1.38629 1.38629 1.38629 1.38629
53554 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53555 21 0.14694 3.34284 2.77755 3.24098 21 - -
53556 1.38629 1.38629 1.38629 1.38629
53557 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53558 22 2.92124 3.54964 0.12142 3.45039 22 - -
53559 1.38629 1.38629 1.38629 1.38629
53560 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53561 23 2.92124 3.54964 0.12142 3.45039 23 - -
53562 1.38629 1.38629 1.38629 1.38629
53563 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53564 24 3.05099 2.57118 3.10057 0.18486 24 - -
53565 1.38629 1.38629 1.38629 1.38629
53566 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53567 25 2.92124 3.54964 0.12142 3.45039 25 - -
53568 1.38629 1.38629 1.38629 1.38629
53569 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53570 26 0.14694 3.34284 2.77755 3.24098 26 - -
53571 1.38629 1.38629 1.38629 1.38629
53572 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53573 27 0.14694 3.34284 2.77755 3.24098 27 - -
53574 1.38629 1.38629 1.38629 1.38629
53575 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53576 28 3.38993 0.13548 3.44120 2.79746 28 - -
53577 1.38629 1.38629 1.38629 1.38629
53578 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53579 29 3.38993 0.13548 3.44120 2.79746 29 - -
53580 1.38629 1.38629 1.38629 1.38629
53581 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53582 30 3.05099 2.57118 3.10057 0.18486 30 - -
53583 1.38629 1.38629 1.38629 1.38629
53584 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53585 31 2.92124 3.54964 0.12142 3.45039 31 - -
53586 1.38629 1.38629 1.38629 1.38629
53587 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53588 32 3.38993 0.13548 3.44120 2.79746 32 - -
53589 1.38629 1.38629 1.38629 1.38629
53590 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53591 33 3.05099 2.57118 3.10057 0.18486 33 - -
53592 1.38629 1.38629 1.38629 1.38629
53593 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53594 34 2.92124 3.54964 0.12142 3.45039 34 - -
53595 1.38629 1.38629 1.38629 1.38629
53596 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53597 35 3.38993 0.13548 3.44120 2.79746 35 - -
53598 1.38629 1.38629 1.38629 1.38629
53599 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53600 36 3.38993 0.13548 3.44120 2.79746 36 - -
53601 1.38629 1.38629 1.38629 1.38629
53602 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53603 37 2.92124 3.54964 0.12142 3.45039 37 - -
53604 1.38629 1.38629 1.38629 1.38629
53605 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53606 38 2.92124 3.54964 0.12142 3.45039 38 - -
53607 1.38629 1.38629 1.38629 1.38629
53608 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53609 39 0.14694 3.34284 2.77755 3.24098 39 - -
53610 1.38629 1.38629 1.38629 1.38629
53611 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53612 40 3.05099 2.57118 3.10057 0.18486 40 - -
53613 1.38629 1.38629 1.38629 1.38629
53614 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53615 41 3.38993 0.13548 3.44120 2.79746 41 - -
53616 1.38629 1.38629 1.38629 1.38629
53617 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53618 42 0.14694 3.34284 2.77755 3.24098 42 - -
53619 1.38629 1.38629 1.38629 1.38629
53620 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53621 43 3.05099 2.57118 3.10057 0.18486 43 - -
53622 1.38629 1.38629 1.38629 1.38629
53623 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53624 44 3.05099 2.57118 3.10057 0.18486 44 - -
53625 1.38629 1.38629 1.38629 1.38629
53626 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547
53627 45 0.14694 3.34284 2.77755 3.24098 45 - -
53628 1.38629 1.38629 1.38629 1.38629
53629 0.01902 3.97180 * 1.46634 0.26236 0.00000 *
53630 //
53631 HMMER3/b [3.0 | March 2010]
53632 NAME 1_SSU_Metazoa_1_SSU_end_five_long
53633 LENG 45
53634 ALPH DNA
53635 RF no
53636 CS no
53637 MAP yes
53638 DATE Sun Feb 19 01:27:18 2012
53639 NSEQ 591
53640 EFFN 3.386238
53641 CKSUM 2887535700
53642 STATS LOCAL MSV -7.4974 0.71934
53643 STATS LOCAL VITERBI -7.6825 0.71934
53644 STATS LOCAL FORWARD -4.1124 0.71934
53645 HMM A C G T
53646 m->m m->i m->d i->m i->i d->m d->d
53647 COMPO 1.26745 1.62592 1.24870 1.44883
53648 1.38629 1.38629 1.38629 1.38629
53649 0.03646 4.02289 4.02289 1.46634 0.26236 0.00000 *
53650 1 0.13927 3.40040 2.81499 3.30397 1 - -
53651 1.38629 1.38629 1.38629 1.38629
53652 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53653 2 2.96152 3.60814 0.11495 3.51494 2 - -
53654 1.38629 1.38629 1.38629 1.38629
53655 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53656 3 3.10898 2.60809 3.15635 0.17543 3 - -
53657 1.38629 1.38629 1.38629 1.38629
53658 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53659 4 3.39712 0.13994 3.44732 2.72887 4 - -
53660 1.38629 1.38629 1.38629 1.38629
53661 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53662 5 2.96152 3.60814 0.11495 3.51494 5 - -
53663 1.38629 1.38629 1.38629 1.38629
53664 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53665 6 3.10898 2.60809 3.15635 0.17543 6 - -
53666 1.38629 1.38629 1.38629 1.38629
53667 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53668 7 0.13927 3.40040 2.81499 3.30397 7 - -
53669 1.38629 1.38629 1.38629 1.38629
53670 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53671 8 0.13927 3.40040 2.81499 3.30397 8 - -
53672 1.38629 1.38629 1.38629 1.38629
53673 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53674 9 3.45629 0.12748 3.50476 2.84585 9 - -
53675 1.38629 1.38629 1.38629 1.38629
53676 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53677 10 0.13927 3.40040 2.81499 3.30397 10 - -
53678 1.38629 1.38629 1.38629 1.38629
53679 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53680 11 0.13927 3.40040 2.81499 3.30397 11 - -
53681 1.38629 1.38629 1.38629 1.38629
53682 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53683 12 2.96152 3.60814 0.11495 3.51494 12 - -
53684 1.38629 1.38629 1.38629 1.38629
53685 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53686 13 2.96152 3.60814 0.11495 3.51494 13 - -
53687 1.38629 1.38629 1.38629 1.38629
53688 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53689 14 3.07323 2.51816 3.12180 0.18748 14 - -
53690 1.38629 1.38629 1.38629 1.38629
53691 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53692 15 3.06966 2.50946 3.11836 0.18872 15 - -
53693 1.38629 1.38629 1.38629 1.38629
53694 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53695 16 3.10898 2.60809 3.15635 0.17543 16 - -
53696 1.38629 1.38629 1.38629 1.38629
53697 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53698 17 3.36000 0.14815 3.41138 2.65969 17 - -
53699 1.38629 1.38629 1.38629 1.38629
53700 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53701 18 3.26516 0.15740 3.13844 2.74735 18 - -
53702 1.38629 1.38629 1.38629 1.38629
53703 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53704 19 2.87964 3.24062 0.14052 3.32982 19 - -
53705 1.38629 1.38629 1.38629 1.38629
53706 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53707 20 3.10898 2.60809 3.15635 0.17543 20 - -
53708 1.38629 1.38629 1.38629 1.38629
53709 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53710 21 0.13927 3.40040 2.81499 3.30397 21 - -
53711 1.38629 1.38629 1.38629 1.38629
53712 0.05903 4.02289 3.23357 1.46634 0.26236 1.09861 0.40547
53713 22 2.93472 3.56915 0.11922 3.47190 22 - -
53714 1.38629 1.38629 1.38629 1.38629
53715 0.03728 4.00114 4.00114 1.46634 0.26236 0.64622 0.74239
53716 23 2.96152 3.60814 0.11495 3.51494 23 - -
53717 1.38629 1.38629 1.38629 1.38629
53718 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53719 24 2.99011 2.56246 2.89768 0.20156 24 - -
53720 1.38629 1.38629 1.38629 1.38629
53721 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53722 25 2.96152 3.60814 0.11495 3.51494 25 - -
53723 1.38629 1.38629 1.38629 1.38629
53724 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53725 26 0.13927 3.40040 2.81499 3.30397 26 - -
53726 1.38629 1.38629 1.38629 1.38629
53727 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53728 27 0.13927 3.40040 2.81499 3.30397 27 - -
53729 1.38629 1.38629 1.38629 1.38629
53730 0.03825 4.02289 3.93074 1.46634 0.26236 1.09861 0.40547
53731 28 3.45281 0.12788 3.50143 2.84332 28 - -
53732 1.38629 1.38629 1.38629 1.38629
53733 0.03652 4.02116 4.02116 1.46634 0.26236 1.03813 0.43714
53734 29 3.20662 0.14667 3.38275 2.78108 29 - -
53735 1.38629 1.38629 1.38629 1.38629
53736 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53737 30 3.07681 2.52693 3.12525 0.18625 30 - -
53738 1.38629 1.38629 1.38629 1.38629
53739 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53740 31 2.84254 3.36777 0.15302 3.01292 31 - -
53741 1.38629 1.38629 1.38629 1.38629
53742 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53743 32 3.45629 0.12748 3.50476 2.84585 32 - -
53744 1.38629 1.38629 1.38629 1.38629
53745 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53746 33 2.96152 3.60814 0.11495 3.51494 33 - -
53747 1.38629 1.38629 1.38629 1.38629
53748 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53749 34 2.87301 3.42675 0.14271 3.12424 34 - -
53750 1.38629 1.38629 1.38629 1.38629
53751 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53752 35 0.13927 3.40040 2.81499 3.30397 35 - -
53753 1.38629 1.38629 1.38629 1.38629
53754 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53755 36 0.13927 3.40040 2.81499 3.30397 36 - -
53756 1.38629 1.38629 1.38629 1.38629
53757 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53758 37 2.96152 3.60814 0.11495 3.51494 37 - -
53759 1.38629 1.38629 1.38629 1.38629
53760 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53761 38 2.96152 3.60814 0.11495 3.51494 38 - -
53762 1.38629 1.38629 1.38629 1.38629
53763 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53764 39 0.13927 3.40040 2.81499 3.30397 39 - -
53765 1.38629 1.38629 1.38629 1.38629
53766 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53767 40 3.10898 2.60809 3.15635 0.17543 40 - -
53768 1.38629 1.38629 1.38629 1.38629
53769 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53770 41 3.45629 0.12748 3.50476 2.84585 41 - -
53771 1.38629 1.38629 1.38629 1.38629
53772 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53773 42 0.15066 3.35632 2.71005 3.25812 42 - -
53774 1.38629 1.38629 1.38629 1.38629
53775 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53776 43 3.10898 2.60809 3.15635 0.17543 43 - -
53777 1.38629 1.38629 1.38629 1.38629
53778 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53779 44 2.89278 2.11895 2.94823 0.25879 44 - -
53780 1.38629 1.38629 1.38629 1.38629
53781 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547
53782 45 0.14853 3.36439 2.72868 3.26658 45 - -
53783 1.38629 1.38629 1.38629 1.38629
53784 0.01840 4.00483 * 1.46634 0.26236 0.00000 *
53785 //
53786 HMMER3/b [3.0 | March 2010]
53787 NAME 1_SSU_Metazoa_1_SSU_end_four_long
53788 LENG 45
53789 ALPH DNA
53790 RF no
53791 CS no
53792 MAP yes
53793 DATE Sun Feb 19 01:27:06 2012
53794 NSEQ 4
53795 EFFN 3.472656
53796 CKSUM 3645550443
53797 STATS LOCAL MSV -7.4702 0.71932
53798 STATS LOCAL VITERBI -7.5589 0.71932
53799 STATS LOCAL FORWARD -4.2514 0.71932
53800 HMM A C G T
53801 m->m m->i m->d i->m i->i d->m d->d
53802 COMPO 1.26293 1.64993 1.23935 1.44588
53803 1.38629 1.38629 1.38629 1.38629
53804 0.03589 4.03824 4.03824 1.46634 0.26236 0.00000 *
53805 1 0.13586 3.42710 2.83226 3.33324 1 - -
53806 1.38629 1.38629 1.38629 1.38629
53807 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53808 2 2.97992 3.63506 0.11211 3.54469 2 - -
53809 1.38629 1.38629 1.38629 1.38629
53810 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53811 3 3.13614 2.62533 3.18246 0.17120 3 - -
53812 1.38629 1.38629 1.38629 1.38629
53813 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53814 4 3.48700 0.12396 3.53414 2.86806 4 - -
53815 1.38629 1.38629 1.38629 1.38629
53816 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53817 5 2.97992 3.63506 0.11211 3.54469 5 - -
53818 1.38629 1.38629 1.38629 1.38629
53819 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53820 6 3.13614 2.62533 3.18246 0.17120 6 - -
53821 1.38629 1.38629 1.38629 1.38629
53822 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53823 7 0.13586 3.42710 2.83226 3.33324 7 - -
53824 1.38629 1.38629 1.38629 1.38629
53825 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53826 8 0.13586 3.42710 2.83226 3.33324 8 - -
53827 1.38629 1.38629 1.38629 1.38629
53828 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53829 9 3.48700 0.12396 3.53414 2.86806 9 - -
53830 1.38629 1.38629 1.38629 1.38629
53831 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53832 10 0.13586 3.42710 2.83226 3.33324 10 - -
53833 1.38629 1.38629 1.38629 1.38629
53834 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53835 11 0.13586 3.42710 2.83226 3.33324 11 - -
53836 1.38629 1.38629 1.38629 1.38629
53837 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53838 12 2.97992 3.63506 0.11211 3.54469 12 - -
53839 1.38629 1.38629 1.38629 1.38629
53840 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53841 13 2.97992 3.63506 0.11211 3.54469 13 - -
53842 1.38629 1.38629 1.38629 1.38629
53843 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53844 14 3.13614 2.62533 3.18246 0.17120 14 - -
53845 1.38629 1.38629 1.38629 1.38629
53846 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53847 15 0.13586 3.42710 2.83226 3.33324 15 - -
53848 1.38629 1.38629 1.38629 1.38629
53849 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53850 16 2.97992 3.63506 0.11211 3.54469 16 - -
53851 1.38629 1.38629 1.38629 1.38629
53852 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53853 17 3.48700 0.12396 3.53414 2.86806 17 - -
53854 1.38629 1.38629 1.38629 1.38629
53855 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53856 18 3.13614 2.62533 3.18246 0.17120 18 - -
53857 1.38629 1.38629 1.38629 1.38629
53858 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53859 19 2.97992 3.63506 0.11211 3.54469 19 - -
53860 1.38629 1.38629 1.38629 1.38629
53861 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53862 20 3.13614 2.62533 3.18246 0.17120 20 - -
53863 1.38629 1.38629 1.38629 1.38629
53864 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53865 21 0.13586 3.42710 2.83226 3.33324 21 - -
53866 1.38629 1.38629 1.38629 1.38629
53867 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53868 22 2.97992 3.63506 0.11211 3.54469 22 - -
53869 1.38629 1.38629 1.38629 1.38629
53870 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53871 23 2.97992 3.63506 0.11211 3.54469 23 - -
53872 1.38629 1.38629 1.38629 1.38629
53873 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53874 24 3.13614 2.62533 3.18246 0.17120 24 - -
53875 1.38629 1.38629 1.38629 1.38629
53876 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53877 25 2.97992 3.63506 0.11211 3.54469 25 - -
53878 1.38629 1.38629 1.38629 1.38629
53879 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53880 26 0.13586 3.42710 2.83226 3.33324 26 - -
53881 1.38629 1.38629 1.38629 1.38629
53882 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53883 27 0.13586 3.42710 2.83226 3.33324 27 - -
53884 1.38629 1.38629 1.38629 1.38629
53885 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53886 28 3.48700 0.12396 3.53414 2.86806 28 - -
53887 1.38629 1.38629 1.38629 1.38629
53888 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53889 29 3.48700 0.12396 3.53414 2.86806 29 - -
53890 1.38629 1.38629 1.38629 1.38629
53891 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53892 30 3.13614 2.62533 3.18246 0.17120 30 - -
53893 1.38629 1.38629 1.38629 1.38629
53894 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53895 31 2.97992 3.63506 0.11211 3.54469 31 - -
53896 1.38629 1.38629 1.38629 1.38629
53897 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53898 32 3.48700 0.12396 3.53414 2.86806 32 - -
53899 1.38629 1.38629 1.38629 1.38629
53900 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53901 33 2.43204 0.95279 2.50379 0.81035 33 - -
53902 1.38629 1.38629 1.38629 1.38629
53903 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53904 34 2.97992 3.63506 0.11211 3.54469 34 - -
53905 1.38629 1.38629 1.38629 1.38629
53906 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53907 35 0.13586 3.42710 2.83226 3.33324 35 - -
53908 1.38629 1.38629 1.38629 1.38629
53909 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53910 36 3.13614 2.62533 3.18246 0.17120 36 - -
53911 1.38629 1.38629 1.38629 1.38629
53912 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53913 37 2.97992 3.63506 0.11211 3.54469 37 - -
53914 1.38629 1.38629 1.38629 1.38629
53915 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53916 38 2.97992 3.63506 0.11211 3.54469 38 - -
53917 1.38629 1.38629 1.38629 1.38629
53918 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53919 39 0.13586 3.42710 2.83226 3.33324 39 - -
53920 1.38629 1.38629 1.38629 1.38629
53921 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53922 40 3.13614 2.62533 3.18246 0.17120 40 - -
53923 1.38629 1.38629 1.38629 1.38629
53924 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53925 41 3.48700 0.12396 3.53414 2.86806 41 - -
53926 1.38629 1.38629 1.38629 1.38629
53927 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53928 42 0.13586 3.42710 2.83226 3.33324 42 - -
53929 1.38629 1.38629 1.38629 1.38629
53930 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53931 43 2.43204 0.95279 2.50379 0.81035 43 - -
53932 1.38629 1.38629 1.38629 1.38629
53933 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53934 44 3.13614 2.62533 3.18246 0.17120 44 - -
53935 1.38629 1.38629 1.38629 1.38629
53936 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547
53937 45 0.13586 3.42710 2.83226 3.33324 45 - -
53938 1.38629 1.38629 1.38629 1.38629
53939 0.01811 4.02046 * 1.46634 0.26236 0.00000 *
53940 //
53941 HMMER3/b [3.0 | March 2010]
53942 NAME 1_SSU_Metazoa_1_SSU_end_one_long
53943 LENG 45
53944 ALPH DNA
53945 RF no
53946 CS no
53947 MAP yes
53948 DATE Sun Feb 19 01:26:32 2012
53949 NSEQ 2
53950 EFFN 2.000000
53951 CKSUM 1503601274
53952 STATS LOCAL MSV -7.3789 0.72782
53953 STATS LOCAL VITERBI -8.2132 0.72782
53954 STATS LOCAL FORWARD -3.5272 0.72782
53955 HMM A C G T
53956 m->m m->i m->d i->m i->i d->m d->d
53957 COMPO 1.28360 1.60112 1.25644 1.44128
53958 1.38629 1.38629 1.38629 1.38629
53959 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
53960 1 0.23862 2.84929 2.43386 2.70756 1 - -
53961 1.38629 1.38629 1.38629 1.38629
53962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53963 2 2.53331 3.02441 0.20344 2.88069 2 - -
53964 1.38629 1.38629 1.38629 1.38629
53965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53966 3 2.57915 2.25909 2.64442 0.28946 3 - -
53967 1.38629 1.38629 1.38629 1.38629
53968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53969 4 2.81865 0.23582 2.88868 2.35662 4 - -
53970 1.38629 1.38629 1.38629 1.38629
53971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53972 5 2.53331 3.02441 0.20344 2.88069 5 - -
53973 1.38629 1.38629 1.38629 1.38629
53974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53975 6 2.57915 2.25909 2.64442 0.28946 6 - -
53976 1.38629 1.38629 1.38629 1.38629
53977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53978 7 0.23862 2.84929 2.43386 2.70756 7 - -
53979 1.38629 1.38629 1.38629 1.38629
53980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53981 8 0.23862 2.84929 2.43386 2.70756 8 - -
53982 1.38629 1.38629 1.38629 1.38629
53983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53984 9 2.81865 0.23582 2.88868 2.35662 9 - -
53985 1.38629 1.38629 1.38629 1.38629
53986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53987 10 0.23862 2.84929 2.43386 2.70756 10 - -
53988 1.38629 1.38629 1.38629 1.38629
53989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53990 11 0.23862 2.84929 2.43386 2.70756 11 - -
53991 1.38629 1.38629 1.38629 1.38629
53992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53993 12 2.53331 3.02441 0.20344 2.88069 12 - -
53994 1.38629 1.38629 1.38629 1.38629
53995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53996 13 2.53331 3.02441 0.20344 2.88069 13 - -
53997 1.38629 1.38629 1.38629 1.38629
53998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
53999 14 2.57915 2.25909 2.64442 0.28946 14 - -
54000 1.38629 1.38629 1.38629 1.38629
54001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54002 15 2.57915 2.25909 2.64442 0.28946 15 - -
54003 1.38629 1.38629 1.38629 1.38629
54004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54005 16 2.57915 2.25909 2.64442 0.28946 16 - -
54006 1.38629 1.38629 1.38629 1.38629
54007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54008 17 2.81865 0.23582 2.88868 2.35662 17 - -
54009 1.38629 1.38629 1.38629 1.38629
54010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54011 18 2.81865 0.23582 2.88868 2.35662 18 - -
54012 1.38629 1.38629 1.38629 1.38629
54013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54014 19 2.53331 3.02441 0.20344 2.88069 19 - -
54015 1.38629 1.38629 1.38629 1.38629
54016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54017 20 2.57915 2.25909 2.64442 0.28946 20 - -
54018 1.38629 1.38629 1.38629 1.38629
54019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54020 21 0.23862 2.84929 2.43386 2.70756 21 - -
54021 1.38629 1.38629 1.38629 1.38629
54022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54023 22 2.53331 3.02441 0.20344 2.88069 22 - -
54024 1.38629 1.38629 1.38629 1.38629
54025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54026 23 2.53331 3.02441 0.20344 2.88069 23 - -
54027 1.38629 1.38629 1.38629 1.38629
54028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54029 24 2.57915 2.25909 2.64442 0.28946 24 - -
54030 1.38629 1.38629 1.38629 1.38629
54031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54032 25 2.53331 3.02441 0.20344 2.88069 25 - -
54033 1.38629 1.38629 1.38629 1.38629
54034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54035 26 0.23862 2.84929 2.43386 2.70756 26 - -
54036 1.38629 1.38629 1.38629 1.38629
54037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54038 27 0.23862 2.84929 2.43386 2.70756 27 - -
54039 1.38629 1.38629 1.38629 1.38629
54040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54041 28 2.81865 0.23582 2.88868 2.35662 28 - -
54042 1.38629 1.38629 1.38629 1.38629
54043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54044 29 2.81865 0.23582 2.88868 2.35662 29 - -
54045 1.38629 1.38629 1.38629 1.38629
54046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54047 30 2.57915 2.25909 2.64442 0.28946 30 - -
54048 1.38629 1.38629 1.38629 1.38629
54049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54050 31 2.53331 3.02441 0.20344 2.88069 31 - -
54051 1.38629 1.38629 1.38629 1.38629
54052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54053 32 2.81865 0.23582 2.88868 2.35662 32 - -
54054 1.38629 1.38629 1.38629 1.38629
54055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54056 33 2.53331 3.02441 0.20344 2.88069 33 - -
54057 1.38629 1.38629 1.38629 1.38629
54058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54059 34 2.53331 3.02441 0.20344 2.88069 34 - -
54060 1.38629 1.38629 1.38629 1.38629
54061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54062 35 0.23862 2.84929 2.43386 2.70756 35 - -
54063 1.38629 1.38629 1.38629 1.38629
54064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54065 36 0.23862 2.84929 2.43386 2.70756 36 - -
54066 1.38629 1.38629 1.38629 1.38629
54067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54068 37 2.53331 3.02441 0.20344 2.88069 37 - -
54069 1.38629 1.38629 1.38629 1.38629
54070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54071 38 2.53331 3.02441 0.20344 2.88069 38 - -
54072 1.38629 1.38629 1.38629 1.38629
54073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54074 39 0.23862 2.84929 2.43386 2.70756 39 - -
54075 1.38629 1.38629 1.38629 1.38629
54076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54077 40 2.57915 2.25909 2.64442 0.28946 40 - -
54078 1.38629 1.38629 1.38629 1.38629
54079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54080 41 2.81865 0.23582 2.88868 2.35662 41 - -
54081 1.38629 1.38629 1.38629 1.38629
54082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54083 42 0.23862 2.84929 2.43386 2.70756 42 - -
54084 1.38629 1.38629 1.38629 1.38629
54085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54086 43 2.57915 2.25909 2.64442 0.28946 43 - -
54087 1.38629 1.38629 1.38629 1.38629
54088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54089 44 2.57915 2.25909 2.64442 0.28946 44 - -
54090 1.38629 1.38629 1.38629 1.38629
54091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54092 45 0.23862 2.84929 2.43386 2.70756 45 - -
54093 1.38629 1.38629 1.38629 1.38629
54094 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
54095 //
54096 HMMER3/b [3.0 | March 2010]
54097 NAME 1_SSU_Metazoa_1_SSU_end_seven_long
54098 LENG 45
54099 ALPH DNA
54100 RF no
54101 CS no
54102 MAP yes
54103 DATE Sun Feb 19 01:27:33 2012
54104 NSEQ 18
54105 EFFN 3.229980
54106 CKSUM 3803743119
54107 STATS LOCAL MSV -8.0117 0.71931
54108 STATS LOCAL VITERBI -7.6232 0.71931
54109 STATS LOCAL FORWARD -4.2368 0.71931
54110 HMM A C G T
54111 m->m m->i m->d i->m i->i d->m d->d
54112 COMPO 1.27186 1.62652 1.24657 1.44567
54113 1.38629 1.38629 1.38629 1.38629
54114 0.03753 3.99452 3.99452 1.46634 0.26236 0.00000 *
54115 1 0.14594 3.35012 2.78230 3.24895 1 - -
54116 1.38629 1.38629 1.38629 1.38629
54117 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54118 2 2.92638 3.55708 0.12057 3.45859 2 - -
54119 1.38629 1.38629 1.38629 1.38629
54120 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54121 3 3.05828 2.57583 3.10759 0.18364 3 - -
54122 1.38629 1.38629 1.38629 1.38629
54123 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54124 4 3.39834 0.13443 3.44926 2.80362 4 - -
54125 1.38629 1.38629 1.38629 1.38629
54126 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54127 5 2.92638 3.55708 0.12057 3.45859 5 - -
54128 1.38629 1.38629 1.38629 1.38629
54129 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54130 6 3.05828 2.57583 3.10759 0.18364 6 - -
54131 1.38629 1.38629 1.38629 1.38629
54132 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54133 7 0.14594 3.35012 2.78230 3.24895 7 - -
54134 1.38629 1.38629 1.38629 1.38629
54135 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54136 8 0.14594 3.35012 2.78230 3.24895 8 - -
54137 1.38629 1.38629 1.38629 1.38629
54138 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54139 9 3.39834 0.13443 3.44926 2.80362 9 - -
54140 1.38629 1.38629 1.38629 1.38629
54141 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54142 10 0.14594 3.35012 2.78230 3.24895 10 - -
54143 1.38629 1.38629 1.38629 1.38629
54144 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54145 11 0.14594 3.35012 2.78230 3.24895 11 - -
54146 1.38629 1.38629 1.38629 1.38629
54147 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54148 12 2.92638 3.55708 0.12057 3.45859 12 - -
54149 1.38629 1.38629 1.38629 1.38629
54150 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54151 13 2.92638 3.55708 0.12057 3.45859 13 - -
54152 1.38629 1.38629 1.38629 1.38629
54153 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54154 14 3.05828 2.57583 3.10759 0.18364 14 - -
54155 1.38629 1.38629 1.38629 1.38629
54156 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54157 15 0.14594 3.35012 2.78230 3.24895 15 - -
54158 1.38629 1.38629 1.38629 1.38629
54159 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54160 16 3.05828 2.57583 3.10759 0.18364 16 - -
54161 1.38629 1.38629 1.38629 1.38629
54162 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54163 17 3.39834 0.13443 3.44926 2.80362 17 - -
54164 1.38629 1.38629 1.38629 1.38629
54165 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54166 18 3.05828 2.57583 3.10759 0.18364 18 - -
54167 1.38629 1.38629 1.38629 1.38629
54168 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54169 19 2.92638 3.55708 0.12057 3.45859 19 - -
54170 1.38629 1.38629 1.38629 1.38629
54171 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54172 20 3.05828 2.57583 3.10759 0.18364 20 - -
54173 1.38629 1.38629 1.38629 1.38629
54174 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54175 21 0.14594 3.35012 2.78230 3.24895 21 - -
54176 1.38629 1.38629 1.38629 1.38629
54177 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54178 22 2.92638 3.55708 0.12057 3.45859 22 - -
54179 1.38629 1.38629 1.38629 1.38629
54180 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54181 23 2.92638 3.55708 0.12057 3.45859 23 - -
54182 1.38629 1.38629 1.38629 1.38629
54183 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54184 24 3.05828 2.57583 3.10759 0.18364 24 - -
54185 1.38629 1.38629 1.38629 1.38629
54186 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54187 25 2.92638 3.55708 0.12057 3.45859 25 - -
54188 1.38629 1.38629 1.38629 1.38629
54189 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54190 26 0.14594 3.35012 2.78230 3.24895 26 - -
54191 1.38629 1.38629 1.38629 1.38629
54192 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54193 27 0.14594 3.35012 2.78230 3.24895 27 - -
54194 1.38629 1.38629 1.38629 1.38629
54195 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54196 28 3.39834 0.13443 3.44926 2.80362 28 - -
54197 1.38629 1.38629 1.38629 1.38629
54198 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54199 29 3.39834 0.13443 3.44926 2.80362 29 - -
54200 1.38629 1.38629 1.38629 1.38629
54201 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54202 30 3.05828 2.57583 3.10759 0.18364 30 - -
54203 1.38629 1.38629 1.38629 1.38629
54204 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54205 31 2.92638 3.55708 0.12057 3.45859 31 - -
54206 1.38629 1.38629 1.38629 1.38629
54207 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54208 32 3.39834 0.13443 3.44926 2.80362 32 - -
54209 1.38629 1.38629 1.38629 1.38629
54210 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54211 33 0.14594 3.35012 2.78230 3.24895 33 - -
54212 1.38629 1.38629 1.38629 1.38629
54213 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54214 34 2.92638 3.55708 0.12057 3.45859 34 - -
54215 1.38629 1.38629 1.38629 1.38629
54216 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54217 35 0.14594 3.35012 2.78230 3.24895 35 - -
54218 1.38629 1.38629 1.38629 1.38629
54219 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54220 36 3.05828 2.57583 3.10759 0.18364 36 - -
54221 1.38629 1.38629 1.38629 1.38629
54222 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54223 37 2.92638 3.55708 0.12057 3.45859 37 - -
54224 1.38629 1.38629 1.38629 1.38629
54225 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54226 38 2.92638 3.55708 0.12057 3.45859 38 - -
54227 1.38629 1.38629 1.38629 1.38629
54228 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54229 39 0.14594 3.35012 2.78230 3.24895 39 - -
54230 1.38629 1.38629 1.38629 1.38629
54231 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54232 40 3.05828 2.57583 3.10759 0.18364 40 - -
54233 1.38629 1.38629 1.38629 1.38629
54234 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54235 41 3.39834 0.13443 3.44926 2.80362 41 - -
54236 1.38629 1.38629 1.38629 1.38629
54237 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54238 42 0.14594 3.35012 2.78230 3.24895 42 - -
54239 1.38629 1.38629 1.38629 1.38629
54240 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54241 43 3.05828 2.57583 3.10759 0.18364 43 - -
54242 1.38629 1.38629 1.38629 1.38629
54243 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54244 44 3.39834 0.13443 3.44926 2.80362 44 - -
54245 1.38629 1.38629 1.38629 1.38629
54246 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
54247 45 2.92638 3.55708 0.12057 3.45859 45 - -
54248 1.38629 1.38629 1.38629 1.38629
54249 0.01894 3.97593 * 1.46634 0.26236 0.00000 *
54250 //
54251 HMMER3/b [3.0 | March 2010]
54252 NAME 1_SSU_Metazoa_1_SSU_end_six_long
54253 LENG 45
54254 ALPH DNA
54255 RF no
54256 CS no
54257 MAP yes
54258 DATE Sun Feb 19 01:27:25 2012
54259 NSEQ 2
54260 EFFN 2.000000
54261 CKSUM 4122535879
54262 STATS LOCAL MSV -7.3837 0.72782
54263 STATS LOCAL VITERBI -8.2233 0.72782
54264 STATS LOCAL FORWARD -3.6249 0.72782
54265 HMM A C G T
54266 m->m m->i m->d i->m i->i d->m d->d
54267 COMPO 1.28359 1.60112 1.25644 1.44128
54268 1.38629 1.38629 1.38629 1.38629
54269 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
54270 1 0.23862 2.84929 2.43386 2.70756 1 - -
54271 1.38629 1.38629 1.38629 1.38629
54272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54273 2 2.53331 3.02441 0.20344 2.88069 2 - -
54274 1.38629 1.38629 1.38629 1.38629
54275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54276 3 2.57915 2.25909 2.64442 0.28946 3 - -
54277 1.38629 1.38629 1.38629 1.38629
54278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54279 4 2.81865 0.23582 2.88868 2.35662 4 - -
54280 1.38629 1.38629 1.38629 1.38629
54281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54282 5 2.53331 3.02441 0.20344 2.88069 5 - -
54283 1.38629 1.38629 1.38629 1.38629
54284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54285 6 2.57915 2.25909 2.64442 0.28946 6 - -
54286 1.38629 1.38629 1.38629 1.38629
54287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54288 7 0.23862 2.84929 2.43386 2.70756 7 - -
54289 1.38629 1.38629 1.38629 1.38629
54290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54291 8 0.23862 2.84929 2.43386 2.70756 8 - -
54292 1.38629 1.38629 1.38629 1.38629
54293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54294 9 2.81865 0.23582 2.88868 2.35662 9 - -
54295 1.38629 1.38629 1.38629 1.38629
54296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54297 10 0.23862 2.84929 2.43386 2.70756 10 - -
54298 1.38629 1.38629 1.38629 1.38629
54299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54300 11 0.23862 2.84929 2.43386 2.70756 11 - -
54301 1.38629 1.38629 1.38629 1.38629
54302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54303 12 2.53331 3.02441 0.20344 2.88069 12 - -
54304 1.38629 1.38629 1.38629 1.38629
54305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54306 13 2.53331 3.02441 0.20344 2.88069 13 - -
54307 1.38629 1.38629 1.38629 1.38629
54308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54309 14 2.57915 2.25909 2.64442 0.28946 14 - -
54310 1.38629 1.38629 1.38629 1.38629
54311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54312 15 0.23862 2.84929 2.43386 2.70756 15 - -
54313 1.38629 1.38629 1.38629 1.38629
54314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54315 16 2.57915 2.25909 2.64442 0.28946 16 - -
54316 1.38629 1.38629 1.38629 1.38629
54317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54318 17 2.81865 0.23582 2.88868 2.35662 17 - -
54319 1.38629 1.38629 1.38629 1.38629
54320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54321 18 2.81865 0.23582 2.88868 2.35662 18 - -
54322 1.38629 1.38629 1.38629 1.38629
54323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54324 19 2.53331 3.02441 0.20344 2.88069 19 - -
54325 1.38629 1.38629 1.38629 1.38629
54326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54327 20 2.57915 2.25909 2.64442 0.28946 20 - -
54328 1.38629 1.38629 1.38629 1.38629
54329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54330 21 0.23862 2.84929 2.43386 2.70756 21 - -
54331 1.38629 1.38629 1.38629 1.38629
54332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54333 22 2.53331 3.02441 0.20344 2.88069 22 - -
54334 1.38629 1.38629 1.38629 1.38629
54335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54336 23 2.53331 3.02441 0.20344 2.88069 23 - -
54337 1.38629 1.38629 1.38629 1.38629
54338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54339 24 2.57915 2.25909 2.64442 0.28946 24 - -
54340 1.38629 1.38629 1.38629 1.38629
54341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54342 25 2.53331 3.02441 0.20344 2.88069 25 - -
54343 1.38629 1.38629 1.38629 1.38629
54344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54345 26 0.23862 2.84929 2.43386 2.70756 26 - -
54346 1.38629 1.38629 1.38629 1.38629
54347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54348 27 0.23862 2.84929 2.43386 2.70756 27 - -
54349 1.38629 1.38629 1.38629 1.38629
54350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54351 28 2.81865 0.23582 2.88868 2.35662 28 - -
54352 1.38629 1.38629 1.38629 1.38629
54353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54354 29 2.81865 0.23582 2.88868 2.35662 29 - -
54355 1.38629 1.38629 1.38629 1.38629
54356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54357 30 2.57915 2.25909 2.64442 0.28946 30 - -
54358 1.38629 1.38629 1.38629 1.38629
54359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54360 31 2.53331 3.02441 0.20344 2.88069 31 - -
54361 1.38629 1.38629 1.38629 1.38629
54362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54363 32 2.81865 0.23582 2.88868 2.35662 32 - -
54364 1.38629 1.38629 1.38629 1.38629
54365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54366 33 2.53331 3.02441 0.20344 2.88069 33 - -
54367 1.38629 1.38629 1.38629 1.38629
54368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54369 34 2.53331 3.02441 0.20344 2.88069 34 - -
54370 1.38629 1.38629 1.38629 1.38629
54371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54372 35 0.23862 2.84929 2.43386 2.70756 35 - -
54373 1.38629 1.38629 1.38629 1.38629
54374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54375 36 2.57915 2.25909 2.64442 0.28946 36 - -
54376 1.38629 1.38629 1.38629 1.38629
54377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54378 37 2.53331 3.02441 0.20344 2.88069 37 - -
54379 1.38629 1.38629 1.38629 1.38629
54380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54381 38 2.53331 3.02441 0.20344 2.88069 38 - -
54382 1.38629 1.38629 1.38629 1.38629
54383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54384 39 0.23862 2.84929 2.43386 2.70756 39 - -
54385 1.38629 1.38629 1.38629 1.38629
54386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54387 40 2.57915 2.25909 2.64442 0.28946 40 - -
54388 1.38629 1.38629 1.38629 1.38629
54389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54390 41 2.81865 0.23582 2.88868 2.35662 41 - -
54391 1.38629 1.38629 1.38629 1.38629
54392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54393 42 0.23862 2.84929 2.43386 2.70756 42 - -
54394 1.38629 1.38629 1.38629 1.38629
54395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54396 43 2.57915 2.25909 2.64442 0.28946 43 - -
54397 1.38629 1.38629 1.38629 1.38629
54398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54399 44 2.57915 2.25909 2.64442 0.28946 44 - -
54400 1.38629 1.38629 1.38629 1.38629
54401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
54402 45 0.23862 2.84929 2.43386 2.70756 45 - -
54403 1.38629 1.38629 1.38629 1.38629
54404 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
54405 //
54406 HMMER3/b [3.0 | March 2010]
54407 NAME 1_SSU_Metazoa_1_SSU_end_ten_long
54408 LENG 45
54409 ALPH DNA
54410 RF no
54411 CS no
54412 MAP yes
54413 DATE Sun Feb 19 01:27:52 2012
54414 NSEQ 62
54415 EFFN 3.265747
54416 CKSUM 2000784101
54417 STATS LOCAL MSV -8.1222 0.71931
54418 STATS LOCAL VITERBI -7.5567 0.71931
54419 STATS LOCAL FORWARD -4.4003 0.71931
54420 HMM A C G T
54421 m->m m->i m->d i->m i->i d->m d->d
54422 COMPO 1.33291 1.62010 1.24727 1.38180
54423 1.38629 1.38629 1.38629 1.38629
54424 0.03728 4.00109 4.00109 1.46634 0.26236 0.00000 *
54425 1 0.14435 3.36186 2.78995 3.26179 1 - -
54426 1.38629 1.38629 1.38629 1.38629
54427 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54428 2 2.93465 3.56905 0.11923 3.47179 2 - -
54429 1.38629 1.38629 1.38629 1.38629
54430 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54431 3 3.00370 2.42271 3.05476 0.20508 3 - -
54432 1.38629 1.38629 1.38629 1.38629
54433 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54434 4 3.41189 0.13277 3.46224 2.81353 4 - -
54435 1.38629 1.38629 1.38629 1.38629
54436 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54437 5 2.93465 3.56905 0.11923 3.47179 5 - -
54438 1.38629 1.38629 1.38629 1.38629
54439 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54440 6 3.07007 2.58334 3.11893 0.18169 6 - -
54441 1.38629 1.38629 1.38629 1.38629
54442 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54443 7 0.14435 3.36186 2.78995 3.26179 7 - -
54444 1.38629 1.38629 1.38629 1.38629
54445 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54446 8 0.14435 3.36186 2.78995 3.26179 8 - -
54447 1.38629 1.38629 1.38629 1.38629
54448 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54449 9 3.41189 0.13277 3.46224 2.81353 9 - -
54450 1.38629 1.38629 1.38629 1.38629
54451 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54452 10 0.14435 3.36186 2.78995 3.26179 10 - -
54453 1.38629 1.38629 1.38629 1.38629
54454 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54455 11 0.14435 3.36186 2.78995 3.26179 11 - -
54456 1.38629 1.38629 1.38629 1.38629
54457 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54458 12 2.93465 3.56905 0.11923 3.47179 12 - -
54459 1.38629 1.38629 1.38629 1.38629
54460 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54461 13 2.93465 3.56905 0.11923 3.47179 13 - -
54462 1.38629 1.38629 1.38629 1.38629
54463 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54464 14 3.07007 2.58334 3.11893 0.18169 14 - -
54465 1.38629 1.38629 1.38629 1.38629
54466 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54467 15 0.14435 3.36186 2.78995 3.26179 15 - -
54468 1.38629 1.38629 1.38629 1.38629
54469 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54470 16 2.93465 3.56905 0.11923 3.47179 16 - -
54471 1.38629 1.38629 1.38629 1.38629
54472 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54473 17 3.41189 0.13277 3.46224 2.81353 17 - -
54474 1.38629 1.38629 1.38629 1.38629
54475 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54476 18 3.07007 2.58334 3.11893 0.18169 18 - -
54477 1.38629 1.38629 1.38629 1.38629
54478 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54479 19 2.93465 3.56905 0.11923 3.47179 19 - -
54480 1.38629 1.38629 1.38629 1.38629
54481 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54482 20 3.00370 2.42271 3.05476 0.20508 20 - -
54483 1.38629 1.38629 1.38629 1.38629
54484 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54485 21 0.14435 3.36186 2.78995 3.26179 21 - -
54486 1.38629 1.38629 1.38629 1.38629
54487 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54488 22 2.93465 3.56905 0.11923 3.47179 22 - -
54489 1.38629 1.38629 1.38629 1.38629
54490 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54491 23 2.93465 3.56905 0.11923 3.47179 23 - -
54492 1.38629 1.38629 1.38629 1.38629
54493 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54494 24 3.07007 2.58334 3.11893 0.18169 24 - -
54495 1.38629 1.38629 1.38629 1.38629
54496 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54497 25 2.93465 3.56905 0.11923 3.47179 25 - -
54498 1.38629 1.38629 1.38629 1.38629
54499 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54500 26 0.14435 3.36186 2.78995 3.26179 26 - -
54501 1.38629 1.38629 1.38629 1.38629
54502 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54503 27 0.14435 3.36186 2.78995 3.26179 27 - -
54504 1.38629 1.38629 1.38629 1.38629
54505 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54506 28 3.41189 0.13277 3.46224 2.81353 28 - -
54507 1.38629 1.38629 1.38629 1.38629
54508 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54509 29 3.41189 0.13277 3.46224 2.81353 29 - -
54510 1.38629 1.38629 1.38629 1.38629
54511 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54512 30 3.07007 2.58334 3.11893 0.18169 30 - -
54513 1.38629 1.38629 1.38629 1.38629
54514 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54515 31 2.93465 3.56905 0.11923 3.47179 31 - -
54516 1.38629 1.38629 1.38629 1.38629
54517 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54518 32 3.41189 0.13277 3.46224 2.81353 32 - -
54519 1.38629 1.38629 1.38629 1.38629
54520 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54521 33 3.07007 2.58334 3.11893 0.18169 33 - -
54522 1.38629 1.38629 1.38629 1.38629
54523 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54524 34 2.93465 3.56905 0.11923 3.47179 34 - -
54525 1.38629 1.38629 1.38629 1.38629
54526 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54527 35 3.41189 0.13277 3.46224 2.81353 35 - -
54528 1.38629 1.38629 1.38629 1.38629
54529 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54530 36 3.07007 2.58334 3.11893 0.18169 36 - -
54531 1.38629 1.38629 1.38629 1.38629
54532 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54533 37 2.93465 3.56905 0.11923 3.47179 37 - -
54534 1.38629 1.38629 1.38629 1.38629
54535 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54536 38 2.93465 3.56905 0.11923 3.47179 38 - -
54537 1.38629 1.38629 1.38629 1.38629
54538 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54539 39 0.14435 3.36186 2.78995 3.26179 39 - -
54540 1.38629 1.38629 1.38629 1.38629
54541 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54542 40 3.07007 2.58334 3.11893 0.18169 40 - -
54543 1.38629 1.38629 1.38629 1.38629
54544 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54545 41 3.41189 0.13277 3.46224 2.81353 41 - -
54546 1.38629 1.38629 1.38629 1.38629
54547 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54548 42 0.14435 3.36186 2.78995 3.26179 42 - -
54549 1.38629 1.38629 1.38629 1.38629
54550 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54551 43 3.07007 2.58334 3.11893 0.18169 43 - -
54552 1.38629 1.38629 1.38629 1.38629
54553 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54554 44 3.07007 2.58334 3.11893 0.18169 44 - -
54555 1.38629 1.38629 1.38629 1.38629
54556 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547
54557 45 0.14435 3.36186 2.78995 3.26179 45 - -
54558 1.38629 1.38629 1.38629 1.38629
54559 0.01881 3.98262 * 1.46634 0.26236 0.00000 *
54560 //
54561 HMMER3/b [3.0 | March 2010]
54562 NAME 1_SSU_Metazoa_1_SSU_end_three_long
54563 LENG 45
54564 ALPH DNA
54565 RF no
54566 CS no
54567 MAP yes
54568 DATE Sun Feb 19 01:26:53 2012
54569 NSEQ 48
54570 EFFN 3.360352
54571 CKSUM 289798115
54572 STATS LOCAL MSV -8.0419 0.71933
54573 STATS LOCAL VITERBI -7.6796 0.71933
54574 STATS LOCAL FORWARD -4.4230 0.71933
54575 HMM A C G T
54576 m->m m->i m->d i->m i->i d->m d->d
54577 COMPO 1.32949 1.58777 1.24433 1.41522
54578 1.38629 1.38629 1.38629 1.38629
54579 0.03663 4.01825 4.01825 1.46634 0.26236 0.00000 *
54580 1 0.14032 3.39225 2.80970 3.29505 1 - -
54581 1.38629 1.38629 1.38629 1.38629
54582 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54583 2 2.95587 3.59990 0.11584 3.50584 2 - -
54584 1.38629 1.38629 1.38629 1.38629
54585 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54586 3 3.10072 2.60284 3.14841 0.17674 3 - -
54587 1.38629 1.38629 1.38629 1.38629
54588 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54589 4 3.44691 0.12857 3.49579 2.83904 4 - -
54590 1.38629 1.38629 1.38629 1.38629
54591 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54592 5 2.95587 3.59990 0.11584 3.50584 5 - -
54593 1.38629 1.38629 1.38629 1.38629
54594 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54595 6 3.10072 2.60284 3.14841 0.17674 6 - -
54596 1.38629 1.38629 1.38629 1.38629
54597 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54598 7 0.14032 3.39225 2.80970 3.29505 7 - -
54599 1.38629 1.38629 1.38629 1.38629
54600 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54601 8 0.14032 3.39225 2.80970 3.29505 8 - -
54602 1.38629 1.38629 1.38629 1.38629
54603 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54604 9 3.44691 0.12857 3.49579 2.83904 9 - -
54605 1.38629 1.38629 1.38629 1.38629
54606 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54607 10 0.14032 3.39225 2.80970 3.29505 10 - -
54608 1.38629 1.38629 1.38629 1.38629
54609 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54610 11 0.14032 3.39225 2.80970 3.29505 11 - -
54611 1.38629 1.38629 1.38629 1.38629
54612 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54613 12 2.95587 3.59990 0.11584 3.50584 12 - -
54614 1.38629 1.38629 1.38629 1.38629
54615 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54616 13 2.95587 3.59990 0.11584 3.50584 13 - -
54617 1.38629 1.38629 1.38629 1.38629
54618 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54619 14 3.10072 2.60284 3.14841 0.17674 14 - -
54620 1.38629 1.38629 1.38629 1.38629
54621 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54622 15 0.14032 3.39225 2.80970 3.29505 15 - -
54623 1.38629 1.38629 1.38629 1.38629
54624 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54625 16 2.95587 3.59990 0.11584 3.50584 16 - -
54626 1.38629 1.38629 1.38629 1.38629
54627 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54628 17 3.44691 0.12857 3.49579 2.83904 17 - -
54629 1.38629 1.38629 1.38629 1.38629
54630 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54631 18 2.41326 0.87609 2.48559 0.88966 18 - -
54632 1.38629 1.38629 1.38629 1.38629
54633 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54634 19 2.95587 3.59990 0.11584 3.50584 19 - -
54635 1.38629 1.38629 1.38629 1.38629
54636 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54637 20 3.10072 2.60284 3.14841 0.17674 20 - -
54638 1.38629 1.38629 1.38629 1.38629
54639 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54640 21 0.14032 3.39225 2.80970 3.29505 21 - -
54641 1.38629 1.38629 1.38629 1.38629
54642 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54643 22 2.95587 3.59990 0.11584 3.50584 22 - -
54644 1.38629 1.38629 1.38629 1.38629
54645 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54646 23 2.95587 3.59990 0.11584 3.50584 23 - -
54647 1.38629 1.38629 1.38629 1.38629
54648 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54649 24 3.10072 2.60284 3.14841 0.17674 24 - -
54650 1.38629 1.38629 1.38629 1.38629
54651 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54652 25 2.95587 3.59990 0.11584 3.50584 25 - -
54653 1.38629 1.38629 1.38629 1.38629
54654 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54655 26 0.14032 3.39225 2.80970 3.29505 26 - -
54656 1.38629 1.38629 1.38629 1.38629
54657 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54658 27 0.14032 3.39225 2.80970 3.29505 27 - -
54659 1.38629 1.38629 1.38629 1.38629
54660 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54661 28 3.44691 0.12857 3.49579 2.83904 28 - -
54662 1.38629 1.38629 1.38629 1.38629
54663 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54664 29 3.44691 0.12857 3.49579 2.83904 29 - -
54665 1.38629 1.38629 1.38629 1.38629
54666 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54667 30 3.10072 2.60284 3.14841 0.17674 30 - -
54668 1.38629 1.38629 1.38629 1.38629
54669 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54670 31 3.10072 2.60284 3.14841 0.17674 31 - -
54671 1.38629 1.38629 1.38629 1.38629
54672 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54673 32 3.44691 0.12857 3.49579 2.83904 32 - -
54674 1.38629 1.38629 1.38629 1.38629
54675 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54676 33 2.95587 3.59990 0.11584 3.50584 33 - -
54677 1.38629 1.38629 1.38629 1.38629
54678 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54679 34 2.95587 3.59990 0.11584 3.50584 34 - -
54680 1.38629 1.38629 1.38629 1.38629
54681 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54682 35 3.44691 0.12857 3.49579 2.83904 35 - -
54683 1.38629 1.38629 1.38629 1.38629
54684 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54685 36 3.02168 2.41083 3.07214 0.20430 36 - -
54686 1.38629 1.38629 1.38629 1.38629
54687 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54688 37 2.95587 3.59990 0.11584 3.50584 37 - -
54689 1.38629 1.38629 1.38629 1.38629
54690 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54691 38 2.95587 3.59990 0.11584 3.50584 38 - -
54692 1.38629 1.38629 1.38629 1.38629
54693 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54694 39 0.14032 3.39225 2.80970 3.29505 39 - -
54695 1.38629 1.38629 1.38629 1.38629
54696 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54697 40 3.10072 2.60284 3.14841 0.17674 40 - -
54698 1.38629 1.38629 1.38629 1.38629
54699 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54700 41 3.44691 0.12857 3.49579 2.83904 41 - -
54701 1.38629 1.38629 1.38629 1.38629
54702 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54703 42 0.14032 3.39225 2.80970 3.29505 42 - -
54704 1.38629 1.38629 1.38629 1.38629
54705 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54706 43 3.10072 2.60284 3.14841 0.17674 43 - -
54707 1.38629 1.38629 1.38629 1.38629
54708 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54709 44 3.10072 2.60284 3.14841 0.17674 44 - -
54710 1.38629 1.38629 1.38629 1.38629
54711 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547
54712 45 0.14032 3.39225 2.80970 3.29505 45 - -
54713 1.38629 1.38629 1.38629 1.38629
54714 0.01848 4.00010 * 1.46634 0.26236 0.00000 *
54715 //
54716 HMMER3/b [3.0 | March 2010]
54717 NAME 1_SSU_Metazoa_1_SSU_end_two_long
54718 LENG 45
54719 ALPH DNA
54720 RF no
54721 CS no
54722 MAP yes
54723 DATE Sun Feb 19 01:26:41 2012
54724 NSEQ 24
54725 EFFN 3.424805
54726 CKSUM 2794101933
54727 STATS LOCAL MSV -7.4074 0.71933
54728 STATS LOCAL VITERBI -7.5219 0.71933
54729 STATS LOCAL FORWARD -4.3767 0.71933
54730 HMM A C G T
54731 m->m m->i m->d i->m i->i d->m d->d
54732 COMPO 1.32087 1.61279 1.23841 1.41090
54733 1.38629 1.38629 1.38629 1.38629
54734 0.03620 4.02977 4.02977 1.46634 0.26236 0.00000 *
54735 1 0.13772 3.41241 2.82276 3.31713 1 - -
54736 1.38629 1.38629 1.38629 1.38629
54737 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54738 2 2.96982 3.62027 0.11366 3.52834 2 - -
54739 1.38629 1.38629 1.38629 1.38629
54740 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54741 3 3.12118 2.61584 3.16808 0.17352 3 - -
54742 1.38629 1.38629 1.38629 1.38629
54743 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54744 4 3.47011 0.12588 3.51799 2.85586 4 - -
54745 1.38629 1.38629 1.38629 1.38629
54746 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54747 5 2.96982 3.62027 0.11366 3.52834 5 - -
54748 1.38629 1.38629 1.38629 1.38629
54749 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54750 6 3.12118 2.61584 3.16808 0.17352 6 - -
54751 1.38629 1.38629 1.38629 1.38629
54752 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54753 7 0.13772 3.41241 2.82276 3.31713 7 - -
54754 1.38629 1.38629 1.38629 1.38629
54755 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54756 8 0.13772 3.41241 2.82276 3.31713 8 - -
54757 1.38629 1.38629 1.38629 1.38629
54758 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54759 9 3.47011 0.12588 3.51799 2.85586 9 - -
54760 1.38629 1.38629 1.38629 1.38629
54761 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54762 10 0.13772 3.41241 2.82276 3.31713 10 - -
54763 1.38629 1.38629 1.38629 1.38629
54764 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54765 11 0.13772 3.41241 2.82276 3.31713 11 - -
54766 1.38629 1.38629 1.38629 1.38629
54767 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54768 12 2.96982 3.62027 0.11366 3.52834 12 - -
54769 1.38629 1.38629 1.38629 1.38629
54770 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54771 13 2.96982 3.62027 0.11366 3.52834 13 - -
54772 1.38629 1.38629 1.38629 1.38629
54773 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54774 14 3.12118 2.61584 3.16808 0.17352 14 - -
54775 1.38629 1.38629 1.38629 1.38629
54776 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54777 15 0.13772 3.41241 2.82276 3.31713 15 - -
54778 1.38629 1.38629 1.38629 1.38629
54779 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54780 16 2.96982 3.62027 0.11366 3.52834 16 - -
54781 1.38629 1.38629 1.38629 1.38629
54782 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54783 17 3.47011 0.12588 3.51799 2.85586 17 - -
54784 1.38629 1.38629 1.38629 1.38629
54785 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54786 18 3.12118 2.61584 3.16808 0.17352 18 - -
54787 1.38629 1.38629 1.38629 1.38629
54788 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54789 19 2.96982 3.62027 0.11366 3.52834 19 - -
54790 1.38629 1.38629 1.38629 1.38629
54791 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54792 20 3.12118 2.61584 3.16808 0.17352 20 - -
54793 1.38629 1.38629 1.38629 1.38629
54794 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54795 21 0.13772 3.41241 2.82276 3.31713 21 - -
54796 1.38629 1.38629 1.38629 1.38629
54797 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54798 22 2.96982 3.62027 0.11366 3.52834 22 - -
54799 1.38629 1.38629 1.38629 1.38629
54800 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54801 23 2.96982 3.62027 0.11366 3.52834 23 - -
54802 1.38629 1.38629 1.38629 1.38629
54803 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54804 24 3.12118 2.61584 3.16808 0.17352 24 - -
54805 1.38629 1.38629 1.38629 1.38629
54806 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54807 25 2.96982 3.62027 0.11366 3.52834 25 - -
54808 1.38629 1.38629 1.38629 1.38629
54809 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54810 26 0.13772 3.41241 2.82276 3.31713 26 - -
54811 1.38629 1.38629 1.38629 1.38629
54812 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54813 27 0.13772 3.41241 2.82276 3.31713 27 - -
54814 1.38629 1.38629 1.38629 1.38629
54815 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54816 28 3.47011 0.12588 3.51799 2.85586 28 - -
54817 1.38629 1.38629 1.38629 1.38629
54818 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54819 29 3.47011 0.12588 3.51799 2.85586 29 - -
54820 1.38629 1.38629 1.38629 1.38629
54821 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54822 30 3.12118 2.61584 3.16808 0.17352 30 - -
54823 1.38629 1.38629 1.38629 1.38629
54824 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54825 31 2.96982 3.62027 0.11366 3.52834 31 - -
54826 1.38629 1.38629 1.38629 1.38629
54827 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54828 32 3.47011 0.12588 3.51799 2.85586 32 - -
54829 1.38629 1.38629 1.38629 1.38629
54830 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54831 33 2.13519 2.26919 2.09248 0.42312 33 - -
54832 1.38629 1.38629 1.38629 1.38629
54833 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54834 34 2.96982 3.62027 0.11366 3.52834 34 - -
54835 1.38629 1.38629 1.38629 1.38629
54836 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54837 35 3.47011 0.12588 3.51799 2.85586 35 - -
54838 1.38629 1.38629 1.38629 1.38629
54839 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54840 36 2.10812 1.99792 2.53146 0.41042 36 - -
54841 1.38629 1.38629 1.38629 1.38629
54842 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54843 37 2.96982 3.62027 0.11366 3.52834 37 - -
54844 1.38629 1.38629 1.38629 1.38629
54845 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54846 38 2.96982 3.62027 0.11366 3.52834 38 - -
54847 1.38629 1.38629 1.38629 1.38629
54848 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54849 39 0.13772 3.41241 2.82276 3.31713 39 - -
54850 1.38629 1.38629 1.38629 1.38629
54851 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54852 40 3.12118 2.61584 3.16808 0.17352 40 - -
54853 1.38629 1.38629 1.38629 1.38629
54854 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54855 41 3.47011 0.12588 3.51799 2.85586 41 - -
54856 1.38629 1.38629 1.38629 1.38629
54857 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54858 42 0.13772 3.41241 2.82276 3.31713 42 - -
54859 1.38629 1.38629 1.38629 1.38629
54860 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54861 43 2.97957 2.28186 3.03175 0.22457 43 - -
54862 1.38629 1.38629 1.38629 1.38629
54863 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54864 44 3.12118 2.61584 3.16808 0.17352 44 - -
54865 1.38629 1.38629 1.38629 1.38629
54866 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547
54867 45 0.13772 3.41241 2.82276 3.31713 45 - -
54868 1.38629 1.38629 1.38629 1.38629
54869 0.01827 4.01183 * 1.46634 0.26236 0.00000 *
54870 //