Mercurial > repos > okorol > itsx
changeset 9:3610c6312b85 draft default tip
Uploaded
| author | okorol |
|---|---|
| date | Fri, 05 Jun 2015 12:05:37 -0400 |
| parents | 88ea67da0d99 |
| children | |
| files | ITSx.xml |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/ITSx.xml Fri Jun 05 11:27:39 2015 -0400 +++ b/ITSx.xml Fri Jun 05 12:05:37 2015 -0400 @@ -5,7 +5,7 @@ </description> <command interpreter="perl"> - ITSx -i $input --detailed_results T -N $domain_num --cpu=\${NSLOTS:1} $preserve $reset + ITSx -i $input --detailed_results T -N $domain_num --cpu=\${GALAXY_SLOTS:-1} $preserve $reset </command> <requirements> @@ -18,7 +18,7 @@ <!-- <param name="cpu" type="integer" value="1" label="cpu"/> --> <param name="complement" type="boolean" checked="true" truevalue="--complement T" falsevalue="--complement F" label="Check both DNA strands against the database"/> <param name="heuristics" type="boolean" checked="false" truevalue="--heuristics T" falsevalue="--heuristics F" label="Use HMMER's heuristic filtering"/> - <param name="reset" type="boolean" checked="false" truevalue="--reset T" falsevalue="--reset F" label="Re-creates the HMM-database before ITSx is run"/> + <param name="reset" type="boolean" checked="true" truevalue="--reset T" falsevalue="--reset F" label="Re-creates the HMM-database before ITSx is run"/> <param name="preserve" type="boolean" checked="false" truevalue="--preserve T" falsevalue="--preserve F" label=" Preserve sequence headers instead of printing out ITSx headers"/> </inputs>