rnbeads: tool_dependencies.xml annotate

annotate tool_dependencies.xml @ 4:24ac7f1e60f6 draft

Uploaded dependencies

author	pavlo-lutsik
date	Wed, 17 Apr 2013 08:08:07 -0400
parents	d1d0d07a8af4
children

rev	line source
0 d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	1 <?xml version="1.0"?>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	2 <tool_dependency>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	3 <set_environment version="0.9">
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	4 <environment_variable name="R_SCRIPTS_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	5 </set_environment>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	6 <package name="R" version="3.0.0">
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	7 <install version="0.9">
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	8 <actions>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	9 <action type="download_by_url">http://CRAN.R-project.org/src/base/R-3/R-3.0.0.tar.gz</action>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	10 <action type="shell_command">./configure --prefix=$INSTALL_DIR --with-x=no</action>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	11 <action type="shell_command">make</action>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	12 <action type="set_environment">
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	14 </action>
4 24ac7f1e60f6 Uploaded dependencies pavlo-lutsik parents: 0 diff changeset	15 <action type="shell_command">R --no-save <<< "install.packages("getopt"); source('http://rnbeads.mpi-inf.mpg.de')"</action>
0 d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	16 </actions>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	17 </install>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	18 <readme>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	19 You need a FORTRAN compiler or perhaps f2c in addition to a C compiler to build R.
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	20 </readme>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	21 </package>
d1d0d07a8af4 First commit pavlo-lutsik parents: diff changeset	22 </tool_dependency>

Mercurial > repos > pavlo-lutsik > rnbeads

annotate tool_dependencies.xml @ 4:24ac7f1e60f6 draft