Mercurial > repos > pavlo-lutsik > rnbeads

comparison tool_dependencies.xml @ 4:24ac7f1e60f6 draft

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Uploaded dependencies
author pavlo-lutsik
date Wed, 17 Apr 2013 08:08:07 -0400
parents d1d0d07a8af4
children
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3:c21f50b45559 4:24ac7f1e60f6
10 <action type="shell_command">./configure --prefix=$INSTALL_DIR --with-x=no</action> 10 <action type="shell_command">./configure --prefix=$INSTALL_DIR --with-x=no</action>
11 <action type="shell_command">make</action> 11 <action type="shell_command">make</action>
12 <action type="set_environment"> 12 <action type="set_environment">
13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> 13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
14 </action> 14 </action>
15 <action type="shell_command">R --no-save &lt;&lt;&lt; "source('http://rnbeads.mpi-inf.mpg.de')"</action> 15 <action type="shell_command">R --no-save &lt;&lt;&lt; "install.packages("getopt"); source('http://rnbeads.mpi-inf.mpg.de')"</action>
16 </actions> 16 </actions>
17 </install> 17 </install>
18 <readme> 18 <readme>
19 You need a FORTRAN compiler or perhaps f2c in addition to a C compiler to build R. 19 You need a FORTRAN compiler or perhaps f2c in addition to a C compiler to build R.
20 </readme> 20 </readme>