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annotate macros.xml @ 1:57f1260ca94e draft

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"planemo upload commit fec9dc76b3dd17b14b02c2f04be9d30f71eba1ae"
author watsocam
date Fri, 11 Mar 2022 23:40:51 +0000
parents 99308601eaa6
children 224e0cf4aaeb
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99308601eaa6 "planemo upload for repository https://github.com/ohsu-comp-bio/UNetCoreograph commit fb90660a1805b3f68fcff80d525b5459c3f7dfd6-dirty"
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1 <?xml version="1.0"?>
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2 <macros>
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3 <xml name="requirements">
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4 <requirements>
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5 <container type="docker">labsyspharm/unetcoreograph:@VERSION@</container>
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6 <requirement type="package" version="3.6">python</requirement>
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7 <requirement type="package" version="1.15.1">tensorflow-estimator</requirement>
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8 <requirement type="package" version="1.15">tensorflow</requirement>
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9 <requirement type="package">cython</requirement>
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10 <requirement type="package" version="0.14.2">scikit-image</requirement>
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11 <requirement type="package">matplotlib</requirement>
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12 <requirement type="package" version="2020.2.16">tifffile</requirement>
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13 <requirement type="package" version="1.1.0">scipy</requirement>
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14 <requirement type="package">opencv</requirement>
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15 <requirement type="package" version="0.8.1">pytiff</requirement>
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16 </requirements>
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17 </xml>
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18
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19 <xml name="version_cmd">
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20 <version_command>echo @VERSION@</version_command>
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21 </xml>
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22 <xml name="citations">
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23 <citations>
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24 </citations>
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25 </xml>
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26
1
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27 <token name="@VERSION@">2.2.8</token>
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28 <token name="@CMD_BEGIN@"><![CDATA[
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29 UNET_PATH="";
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30 if [ -f "/app/UNetCoreograph.py" ]; then
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31 export UNET_PATH="/app/UNetCoreograph.py";
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32 else
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33 export UNET_PATH="${__tool_directory__}/UNetCoreograph.py";
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34 fi;
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35 ]]></token>
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99308601eaa6 "planemo upload for repository https://github.com/ohsu-comp-bio/UNetCoreograph commit fb90660a1805b3f68fcff80d525b5459c3f7dfd6-dirty"
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36 </macros>