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comparison tools/seq_filter_by_id/README.rst @ 8:2d4537dbf0bc draft

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v0.2.6 Depend on Biopython 1.67 from Tool Shed or (Bio)conda
author peterjc
date Wed, 10 May 2017 13:18:01 -0400
parents fb1313d79396
children 141612f8c3e3
comparison
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7:fb1313d79396 8:2d4537dbf0bc
1 Galaxy tool to filter FASTA, FASTQ or SFF sequences by ID 1 Galaxy tool to filter FASTA, FASTQ or SFF sequences by ID
2 ========================================================= 2 =========================================================
3 3
4 This tool is copyright 2010-2015 by Peter Cock, The James Hutton Institute 4 This tool is copyright 2010-2017 by Peter Cock, The James Hutton Institute
5 (formerly SCRI, Scottish Crop Research Institute), UK. All rights reserved. 5 (formerly SCRI, Scottish Crop Research Institute), UK. All rights reserved.
6 See the licence text below. 6 See the licence text below.
7 7
8 This tool is a short Python script (using both Biopython library functions) 8 This tool is a short Python script (using both Biopython library functions)
9 which divides a FASTA, FASTQ, or SFF file in two, those sequences with or 9 which divides a FASTA, FASTQ, or SFF file in two, those sequences with or
89 v0.2.3 - Ignore blank lines in ID file (contributed by Gildas Le Corguillé). 89 v0.2.3 - Ignore blank lines in ID file (contributed by Gildas Le Corguillé).
90 - Defensive quoting of filenames etc in the command definition 90 - Defensive quoting of filenames etc in the command definition
91 (internal change only). 91 (internal change only).
92 v0.2.4 - Corrected error message wording. 92 v0.2.4 - Corrected error message wording.
93 v0.2.5 - Ignore empty names, common in R output (Gildas Le Corguillé). 93 v0.2.5 - Ignore empty names, common in R output (Gildas Le Corguillé).
94 v0.2.6 - Depends on Biopython 1.67 via legacy Tool Shed package or bioconda.
94 ======= ====================================================================== 95 ======= ======================================================================
95 96
96 97
97 Developers 98 Developers
98 ========== 99 ==========