Mercurial > repos > peterjc > tmhmm_and_signalp

diff tools/protein_analysis/seq_analysis_utils.py @ 7:9b45a8743100 draft

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Uploaded v0.1.0, which adds a wrapper for Promoter 2.0 (DNA tool) and enables use of Galaxy's <parallelism> tag for SignalP, TMHMM X Promoter wrappers.
author peterjc
date Mon, 30 Jul 2012 10:25:07 -0400
parents a290c6d4e658
children e52220a9ddad
line wrap: on
line diff
--- a/tools/protein_analysis/seq_analysis_utils.py	Tue Jun 07 18:07:09 2011 -0400
+++ b/tools/protein_analysis/seq_analysis_utils.py	Mon Jul 30 10:25:07 2012 -0400
@@ -100,6 +100,8 @@
             if os.path.isfile(f):
                 os.remove(f)
         raise err
+    for f in files:
+        assert os.path.isfile(f), "Missing split file %r (!??)" % f
     return files
 
 def run_jobs(jobs, threads, pause=10, verbose=False):