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comparison summarize_gff.xml @ 10:d0431a839606 draft

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author petr-novak
date Wed, 14 Aug 2019 11:24:15 -0400
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children ddc6bab20889
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9:ed4d9ede9cb4 10:d0431a839606
1 <tool id="gff_summary" name="Summarize gff3 output from DANTE" version="0.1.0" python_template_version="3.5">
2 <requirements>
3 <requirement type="package">R</requirement>
4 </requirements>
5 <command detect_errors="exit_code"><![CDATA[
6 summarize_gff.R '$inputgff' '$output'
7 ]]></command>
8 <inputs>
9 <param type="data" name="inputgff" format="gff3" />
10 <param name="group" type="select" label="select categories to summarize" multiple="true">
11 <option value="Name">Numerical sort</option>
12 <option value="Final_Classification">General numeric sort</option>
13 <option value="seqid">Alphabetical sort</option>
14 </param>
15 </inputs>
16 <outputs>
17 <data name="output" format="csv" />
18 </outputs>
19 <help><![CDATA[
20 TODO: Fill in help.
21 ]]></help>
22 </tool>