Mercurial > repos > petr-novak > dante

diff dante_gff_to_tabular.xml @ 23:e2bbc79f0fac draft

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"planemo upload commit baf4ca09569b1b709c37f2df712e778da05edaf9-dirty"
author petr-novak
date Wed, 25 Jan 2023 13:06:55 +0000
parents ddc6bab20889
children df99812ded92
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line diff
--- a/dante_gff_to_tabular.xml	Fri Apr 03 07:27:59 2020 -0400
+++ b/dante_gff_to_tabular.xml	Wed Jan 25 13:06:55 2023 +0000
@@ -1,9 +1,9 @@
-<tool id="gff_to_tabular" name="Convert dante gff3 to tab delimited file" version="0.1.0" python_template_version="3.5">
+<tool id="gff_to_tabular" name="Convert dante gff3 to tab delimited file" version="0.1.4" python_template_version="3.5">
     <requirements>
-        <requirement type="package">R</requirement>
+        <requirement type="package">dante=0.1.4</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
-        Rscript ${__tool_directory__}/summarize_gff.R '$inputgff' '$output'
+        summarize_gff.R '$inputgff' '$output'
     ]]></command>
     <inputs>
       <param type="data" name="inputgff" format="gff3" />