Mercurial > repos > petr-novak > dante_ltr
annotate dante_ltr_summary.xml @ 24:e61f06df42b9 draft default tip
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author | petr-novak |
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date | Thu, 18 Apr 2024 08:56:19 +0000 |
parents | 27e5f58763f2 |
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1 <tool id="dante_ltr_summary" name="Summarize DANTE_LTR output" version="@TOOL_VERSION@" python_template_version="3.5"> |
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2 <macros> |
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3 <import>macros.xml</import> |
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4 </macros> |
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5 <expand macro="requirements" /> |
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6 <command detect_errors="exit_code"><![CDATA[ |
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7 dante_ltr_summary -g '$input1' -o output && |
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8 ls -l && |
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9 cp output.html $output1 && |
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10 mkdir -p ${output1.extra_files_path} && |
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11 cp -r output_plots ${output1.extra_files_path}/ |
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12 ]]></command> |
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13 <inputs> |
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14 <param type="data" name="input1" format="gff3" label="GFF3 output from DANTE_LTR" /> |
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15 </inputs> |
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16 <outputs> |
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17 <data label="DANTE_LTR summmary from dataset $input1.hid" format="html" name="output1" /> |
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18 </outputs> |
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19 <help><![CDATA[ |
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20 This tool takes GFF3 output from DANTE_LTR and make graphical summary of the results. |
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21 ]]></help> |
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22 </tool> |