Mercurial > repos > petr-novak > dante_ltr
diff databases/lineage_domain_order.csv @ 0:7b0bbe7477c4 draft
"planemo upload commit 92c684dff3b377c8c08654c7f3d46a133385e3e0-dirty"
| author | petr-novak |
|---|---|
| date | Tue, 08 Mar 2022 13:24:33 +0000 |
| parents | |
| children | 0c3111ab729b |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/databases/lineage_domain_order.csv Tue Mar 08 13:24:33 2022 +0000 @@ -0,0 +1,32 @@ +Lineage Domains order offset5prime offset3prime +Class_I/LTR/Ty1_copia/Ale GAG PROT INT RT RH 2000 2000 +Class_I/LTR/Ty1_copia/Alesia GAG PROT INT RT RH 2000 3000 +Class_I/LTR/Ty1_copia/Angela GAG PROT INT RT RH 4000 6000 +Class_I/LTR/Ty1_copia/Bianca GAG PROT INT RT RH 2000 3000 +Class_I/LTR/Ty1_copia/Bryco GAG PROT INT RT RH 2000 3000 +Class_I/LTR/Ty1_copia/Gymco-I GAG PROT INT RT RH 2000 2500 +Class_I/LTR/Ty1_copia/Gymco-II GAG PROT INT RT RH 4000 2000 +Class_I/LTR/Ty1_copia/Gymco-III GAG PROT INT RT RH 2000 2000 +Class_I/LTR/Ty1_copia/Gymco-IV GAG PROT INT RT RH 2000 2000 +Class_I/LTR/Ty1_copia/Ikeros GAG PROT INT RT RH 2000 5000 +Class_I/LTR/Ty1_copia/Ivana GAG PROT INT RT RH 2000 2000 +Class_I/LTR/Ty1_copia/Lyco GAG PROT INT RT RH 2000 2000 +Class_I/LTR/Ty1_copia/Osser GAG PROT INT RT RH 2000 2000 +Class_I/LTR/Ty1_copia/SIRE GAG PROT INT RT RH 7000 4000 +Class_I/LTR/Ty1_copia/TAR GAG PROT INT RT RH 4000 3000 +Class_I/LTR/Ty1_copia/Tork GAG PROT INT RT RH 2000 3000 +Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir GAG PROT RT RH INT CHD 2000 4000 +Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass GAG PROT RT RH INT CHD 5000 5000 +Class_I/LTR/Ty3_gypsy/chromovirus/CRM GAG PROT RT RH INT CHDCR 6000 3000 +Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel GAG PROT RT RH INT CHD 3000 3000 +Class_I/LTR/Ty3_gypsy/chromovirus/Reina GAG PROT RT RH INT CHD 2000 2000 +Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1 GAG PROT RT RH INT CHD 2000 2000 +Class_I/LTR/Ty3_gypsy/chromovirus/Tekay GAG PROT RT RH INT CHD 6000 6000 +Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila GAG PROT RT RH INT 4000 9000 +Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Ogre GAG PROT RT RH aRH INT 10000 15000 +Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/Retand GAG PROT RT RH aRH INT 4000 15000 +Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/TatI GAG PROT aRH RT RH INT 5000 5000 +Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/TatII GAG PROT aRH RT RH INT 5000 5000 +Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Tat/TatIII GAG PROT RT RH INT aRH 10000 10000 +Class_I/LTR/Ty3_gypsy/non-chromovirus/Phygy GAG PROT RT RH INT 4000 4000 +Class_I/LTR/Ty3_gypsy/non-chromovirus/Selgy GAG PROT RT RH INT 2000 2000