Mercurial > repos > petr-novak > get_organelle

annotate README.md @ 0:0ff5b94932fe draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
author petr-novak
date Tue, 31 May 2022 10:56:52 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
1 # get_Organelle_galaxy_wraper
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
2
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
3 this repository provide getOrganelle tool for Galaxy server. As dependency it used reference database https://github.com/Kinggerm/GetOrganelleDB. The copy of database is installed from repositories https://github.com/kavonrtep/getorganelledb and this dependency is defined in https://github.com/kavonrtep/package_getorganelledb_0_0_1.
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
4
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
5 Package can be installed from Galaxy toolshed.
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
6
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
7 List of components:
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
8 - tool definition: this repository
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
9 - source - this repository
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
10 - toolshed - .......
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
11 - dependency package:
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
12 - source https://github.com/kavonrtep/package_getorganelledb_0_0_1
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
13 - toolshed package
0ff5b94932fe "planemo upload commit 32e4182f0466ce67f42e288f4f35f4400703ea79-dirty"
petr-novak
parents:
diff changeset
14 - database location - https://github.com/kavonrtep/getorganelledb