Mercurial > repos > petr-novak > package_profrep_databases_1_0

diff tool_dependencies.xml @ 9:1af2bcd7e8fd draft

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Uploaded
author petr-novak
date Thu, 27 Jun 2019 07:08:14 -0400
parents 7650b37f9a30
children e88fe2bb9f79
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Jun 27 06:46:24 2019 -0400
+++ b/tool_dependencies.xml	Thu Jun 27 07:08:14 2019 -0400
@@ -3,16 +3,9 @@
     <package name="profrep_databases" version="1.0">
         <install version="1.0">
           <actions>
+            <action type="make_directory">$INSTALL_DIR/test</action>
+            <action type="make_directory">$INSTALL_DIR/test2</action>
             <action type="download_file">http://downloads.sourceforge.net/project/bio-bwa/bwa-0.5.9.tar.bz2</action>
-            <action type="move_file">
-              <source>bwa-0.5.9.tar.bz2</source>
-              <destination>$INSTALL_DIR</destination>
-            </action>
-            <action type="shell_command">git clone https://bitbucket.org/petrnovak/re_databases.git</action>
-            <action type="move_directory_files">
-              <source_directory>re_databases</source_directory>
-              <destination_directory>$INSTALL_DIR</destination_directory>
-            </action>
           </actions>
         </install>
         <readme>