Mercurial > repos > petr-novak > profrep

changeset 6:1c25246f6e68 draft default tip

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Uploaded
author petr-novak
date Thu, 27 Jun 2019 09:51:41 -0400
parents ad3bbf392135
children
files profrep.xml tool_dependencies.xml
diffstat 2 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/profrep.xml	Wed Jun 26 11:14:05 2019 -0400
+++ b/profrep.xml	Thu Jun 27 09:51:41 2019 -0400
@@ -15,7 +15,7 @@
     <requirement type="package" version="1.16.4">jbrowse</requirement>
 </requirements>
 <command>
-which python3 > /home/petr/tmp/profreptest/env;
+env > /tmp/profrep_test_env;
 
 #if not $custom_data.options_custom_data:
 	profrep_reads=\$(awk -v var="${custom_data.prepared_dataset}" 'BEGIN{FS="\t"}{if ($1 == var) print $3}' $__tool_data_path__/profrep/prepared_datasets.txt) &amp;&amp;
--- a/tool_dependencies.xml	Wed Jun 26 11:14:05 2019 -0400
+++ b/tool_dependencies.xml	Thu Jun 27 09:51:41 2019 -0400
@@ -1,7 +1,7 @@
 <?xml version="1.0" ?>
 <tool_dependency>
     <package name="profrep_databases" version="1.0">
-        <repository changeset_revision="a3a58ca9ed72" name="package_profrep_databases_1_0" owner="petr-novak" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"/>
+        <repository changeset_revision="e7744e56a5dc" name="package_profrep_databases_1_0" owner="petr-novak" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"/>
         <readme>
       Profrep databases
     </readme>