Mercurial > repos > petr-novak > repeatrxplorer
diff databases/0INFO.md @ 0:1d1b9e1b2e2f draft
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author | petr-novak |
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date | Thu, 19 Dec 2019 10:24:45 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/databases/0INFO.md Thu Dec 19 10:24:45 2019 -0500 @@ -0,0 +1,9 @@ +# DATABASE FOLDER CONTENT # + +This folder contain fasta files sequence databases used for cluster annotation. +To run clustering, blast databases must be created from fasta files. This will be done automaticaly when make is run. +folder content: +dna_database.fasta - mitochondrial, plastid, rDNA genes, contaminants +protein_database.fasta - protein domains from transposable elements +tRNA_database.fasta - fragments from tRNA sequences for identification of Primer Binding Sites of transposable elements +