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comparison gff2tabular.xml @ 2:90c46e40d222 draft

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planemo upload for repository https://github.com/kavonrtep/galaxy_packages commit 248ffeb6792d5807820b664eae3e88306f3f395e-dirty
author petr-novak
date Mon, 26 Feb 2024 13:11:53 +0000
parents 696e702ebf74
children
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1:639c0edb7e64 2:90c46e40d222
2 <description>converter</description> 2 <description>converter</description>
3 <requirements> 3 <requirements>
4 <requirement type="package">R</requirement> 4 <requirement type="package">R</requirement>
5 <requirement type="package">bioconductor-rtracklayer</requirement> 5 <requirement type="package">bioconductor-rtracklayer</requirement>
6 </requirements> 6 </requirements>
7 <required_files>
8 <include type="literal" path="gff2tabular.R"/>
9 </required_files>
7 <command detect_errors="exit_code"><![CDATA[ 10 <command detect_errors="exit_code"><![CDATA[
8 Rscript ${__tool_directory__}/gff2tabular.R '$inputgff' '$output' 11 Rscript ${__tool_directory__}/gff2tabular.R '$inputgff' '$output'
9 ]]></command> 12 ]]></command>
10 <inputs> 13 <inputs>
11 <param type="data" name="inputgff" format="gff" /> 14 <param type="data" name="inputgff" format="gff" />